0.013325 0.000000 0.001418 0.000000 0.007490 0.000000 0.000000 0.000000 0.007413 0.00000 0.00000 0.00000 5.96793 14.89577 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.41153 2.53737 2.59044 63.03566 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 6.96715 11.43723 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 7.96527 9.05267 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 14.90797 11.91318 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 15.91112 10.84690 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0000-0003-4005-5922 Shields, E.T. 0000-0002-1530-0546 Slaughter, C.K. 0009-0005-4061-1062 Magna, E.N. 0000-0002-7690-3519 Snow, C.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 96.076 90.000 75.045 133.505 135.653 1351457.644 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 S C N 306 N C N 307 N C N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C N 328 N C N 329 N C N 330 N C N 331 N O N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N C N 353 N N N 354 N O N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C N 375 N C N 376 N S N 377 N C N 378 N O N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N MG N 391 N N N 392 S C N 393 N C N 394 N O N 395 N C Y 396 N C Y 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N N N 415 S C N 416 N C N 417 N O N 418 N C N 419 N C N 420 N C N 421 N O N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N N N 432 S C N 433 N C N 434 N O N 435 N C N 436 N O N 437 N O N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N N N 446 S C N 447 N C N 448 N O N 449 R C N 450 N O N 451 N C N 452 N O N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N N N 463 S C N 464 N C N 465 N O N 466 N C Y 467 N C Y 468 N C Y 469 N C Y 470 N N Y 471 N C Y 472 N C Y 473 N C Y 474 N C Y 475 N C N 476 N O N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N N N 490 S C N 491 N C N 492 N O N 493 N C Y 494 N C Y 495 N C Y 496 N C Y 497 N C Y 498 N C Y 499 N C N 500 N O N 501 N O N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N N N 514 S C N 515 N C N 516 N O N 517 N C N 518 N C N 519 N C N 520 N O N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing Y 395 N doub Y 396 N sing Y 397 N sing N 398 N sing Y 399 N doub N 400 N sing Y 401 N doub N 402 N sing Y 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N doub N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N doub N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N doub N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N doub N 460 N sing N 461 N sing N 462 N sing N 463 N sing Y 464 N doub Y 465 N sing Y 466 N sing N 467 N sing Y 468 N doub Y 469 N sing Y 470 N sing N 471 N sing Y 472 N sing Y 473 N doub N 474 N sing Y 475 N doub N 476 N sing Y 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N doub N 488 N sing N 489 N sing N 490 N sing N 491 N sing Y 492 N doub Y 493 N sing Y 494 N sing N 495 N sing Y 496 N doub N 497 N sing Y 498 N doub N 499 N sing Y 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N doub N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing To Be Published 0353 Modular Scaffold Crystals for Programmable Installation and Structural Observation of DNA-Binding Proteins Acta Crystallogr D Struct Biol 0353 10.1107/S2059798319011471 31588918 Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix 2019 0000-0003-4005-5922 0000-0002-1530-0546 0000-0003-4910-8154 0009-0005-4061-1062 0009-0007-6710-847X 0000-0003-0563-5032 0000-0002-0699-155X 0000-0002-7690-3519 0000-0003-3921-3209 0000-0002-5052-991X 0000-0003-2492-979X 0000-0002-4871-2096 0000-0001-6690-8458 0000-0001-8857-9464 0000-0003-3107-2202 0000-0001-9633-6067 0000-0001-8273-0047 0000-0002-3311-2944 0000-0002-8346-9247 0000-0002-0623-3214 0000-0001-6384-0320 0000-0001-9333-8219 10.2210/pdb9z08/pdb pdb_00009z08 100 1 N CMOS 2022-04-14 RDI CMOS_8M M SINGLE WAVELENGTH M x-ray 1 1.0 1.0 4.2.2 ALS 1.0 SYNCHROTRON ALS BEAMLINE 4.2.2 6367.136 DNA (5'-D(P*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*T*GP*CP*CP*CP*TP*CP*A)-3') 1 syn polymer 6478.195 DNA (5'-D(P*TP*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*G)-3') 1 syn polymer 30749.053 Replication initiation protein 1 man polymer 3084.041 DNA (5'-D(P*GP*AP*CP*GP*GP*TP*AP*AP*TP*T)-3') 1 syn polymer 3044.017 DNA (5'-D(P*GP*TP*AP*AP*TP*TP*AP*CP*CP*G)-3') 1 syn polymer 24.305 MAGNESIUM ION 2 syn non-polymer Protein E,Protein rep,Protein F4, Replication Initiator protein RepE54 no no (DA)(DC)(DC)(DT)(DG)(DT)(DG)(DA)(DC)(DA)(DA)(DA)(DT)(DT)(DG)(DC)(DC)(DC)(DT)(DC) (DA) ACCTGTGACAAATTGCCCTCA A polydeoxyribonucleotide no no (DT)(DC)(DT)(DG)(DA)(DG)(DG)(DG)(DC)(DA)(DA)(DT)(DT)(DT)(DG)(DT)(DC)(DA)(DC)(DA) (DG) TCTGAGGGCAATTTGTCACAG B polydeoxyribonucleotide no no MRGSHHHHHHGSMAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYA EIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQ FRLSETKEITNPYAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIE KKKGRQTTHIVFSFRDITSMTTG MRGSHHHHHHGSMAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYA EIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQ FRLSETKEITNPYAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIE KKKGRQTTHIVFSFRDITSMTTG C polypeptide(L) no no (DG)(DA)(DC)(DG)(DG)(DT)(DA)(DA)(DT)(DT) GACGGTAATT E polydeoxyribonucleotide no no (DG)(DT)(DA)(DA)(DT)(DT)(DA)(DC)(DC)(DG) GTAATTACCG F polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 263 repE, E, rep, ECOK12F045 562 Escherichia coli 469008 Escherichia coli BL21(DE3) Biological sequence 1 6.80 parallelepiped VAPOR DIFFUSION, SITTING DROP 6.5 10 mM Magnesium acetate, 1.3 M Lithium sulfate, 50 mM sodium cacodylate pH 6.5 298 -16.715 1 19 A 9 B 27 4.751 A_DC9:DG27_B 1 -8.927 0.105 0.127 0.138 -15.856 1 20 A 10 B 26 4.111 A_DT10:DA26_B 2 -14.518 -0.164 0.464 -0.042 -4.297 1 19 A 11 B 25 -0.059 A_DG11:DC25_B 3 -4.373 -0.531 -0.044 -0.080 1.831 1 20 A 12 B 24 -1.887 A_DT12:DA24_B 4 -3.910 -0.050 -0.026 -0.130 -2.945 1 19 A 13 B 23 -0.084 A_DG13:DC23_B 5 -6.826 -0.544 -0.118 -0.153 11.079 1 20 A 14 B 22 5.227 A_DA14:DT22_B 6 -3.655 0.032 0.880 -0.157 12.181 1 19 A 15 B 21 2.543 A_DC15:DG21_B 7 -7.270 0.486 0.800 -0.112 11.640 1 20 A 16 B 20 9.054 A_DA16:DT20_B 8 -23.760 0.139 0.688 0.102 -1.556 1 20 A 17 B 19 4.053 A_DA17:DT19_B 9 -16.878 0.057 -0.022 -0.014 -6.260 1 20 A 18 B 18 5.778 A_DA18:DT18_B 10 -20.516 0.006 -0.238 -0.060 -6.908 1 20 A 19 B 17 -1.887 A_DT19:DA17_B 11 -12.373 -0.377 -0.217 -0.228 -7.822 1 20 A 20 B 16 -7.066 A_DT20:DA16_B 12 -9.456 -0.641 -0.851 -0.243 20.175 1 19 A 21 B 15 -2.183 A_DG21:DC15_B 13 3.119 0.137 0.338 -0.099 14.324 1 19 A 22 B 14 -2.200 A_DC22:DG14_B 14 -0.222 0.486 -1.836 -0.703 -3.726 1 19 A 23 B 13 -3.490 A_DC23:DG13_B 15 9.013 0.783 -0.620 -0.433 7.134 1 19 A 24 B 12 -0.588 A_DC24:DG12_B 16 -2.672 0.208 -0.337 -0.060 -1.889 1 20 A 25 B 11 -0.126 A_DT25:DA11_B 17 -9.459 0.108 0.141 -0.230 -3.043 1 19 A 26 B 10 1.141 A_DC26:DG10_B 18 -5.430 0.408 0.141 -0.082 0.528 1 20 A 27 B 9 -2.286 A_DA27:DT9_B 19 -9.783 0.718 0.193 -0.041 -0.510 1 19 E 28 B 8 -1.078 E_DG28:DC8_B 20 -15.698 -0.261 0.044 -0.053 -0.042 1 20 E 29 B 7 -13.928 E_DA29:DT7_B 21 -14.041 0.250 0.086 0.167 -8.619 1 19 E 30 F 6 -4.168 E_DC30:DG6_F 22 -15.264 0.192 0.770 -0.226 -3.973 1 E 31 F 5 7.777 E_DG31:DC5_F 23 -10.899 -2.794 2.291 -1.523 27.379 1 8 E 32 F 3 -29.467 E_DG32:DA3_F 24 -11.629 1.208 -0.242 1.528 7.426 1 20 E 34 F 2 -9.776 E_DA34:DT2_F 25 -34.424 0.165 0.134 -0.063 -3.442 1 20 E 35 F 1 -0.943 E_DA35:DT1_F 26 -32.056 0.248 -0.265 -0.035 -9.404 1 20 E 36 F 0 3.717 E_DT36:DA0_F 27 -20.844 -0.068 -0.188 -0.086 -5.113 1 20 E 37 F -1 1.707 E_DT37:DA-1_F 28 -16.773 -0.260 -0.070 0.039 3.147 29.235 A A 9 10 7.786 B B 27 26 3.323 3.916 0.021 -1.074 AA_DC9DT10:DA26DG27_BB 1 2.020 -4.016 28.908 -2.972 0.395 2.581 33.878 A A 10 11 19.747 B B 26 25 2.924 11.275 -0.074 -0.489 AA_DT10DG11:DC25DA26_BB 2 3.788 -6.633 31.779 -2.418 0.658 3.363 32.750 A A 11 12 -6.430 B B 25 24 3.289 -3.619 -0.421 -0.803 AA_DG11DT12:DA24DC25_BB 3 -0.547 0.973 32.551 -0.788 0.650 3.461 38.703 A A 12 13 6.794 B B 24 23 3.432 4.493 0.024 0.453 AA_DT12DG13:DC23DA24_BB 4 -0.348 0.527 38.449 0.101 -0.082 2.761 32.872 A A 13 14 4.028 B B 23 22 2.954 2.247 0.120 -0.472 AA_DG13DA14:DT22DC23_BB 5 -9.539 17.104 31.416 -1.179 -1.672 3.337 33.273 A A 14 15 0.959 B B 22 21 3.350 0.549 -0.157 -0.918 AA_DA14DC15:DG21DT22_BB 6 -0.623 1.088 33.263 -1.698 0.169 3.189 37.098 A A 15 16 -1.427 B B 21 20 3.180 -0.908 0.024 -0.452 AA_DC15DA16:DT20DG21_BB 7 0.977 -1.536 37.075 -0.592 0.090 3.592 36.888 A A 16 17 -3.875 B B 20 19 3.582 -2.450 -0.219 -0.340 AA_DA16DA17:DT19DT20_BB 8 0.658 -1.041 36.804 -0.173 0.444 3.521 36.538 A A 17 18 -6.285 B B 19 18 3.494 -3.932 0.118 -0.418 AA_DA17DA18:DT18DT19_BB 9 1.306 -2.088 36.311 -0.083 0.006 3.181 33.143 A A 18 19 3.318 B B 18 17 3.206 1.891 -0.539 -0.792 AA_DA18DT19:DA17DT18_BB 10 -1.796 3.151 33.043 -1.700 0.650 3.311 33.200 A A 19 20 -1.652 B B 17 16 3.360 -0.943 -0.414 0.096 AA_DT19DT20:DA16DA17_BB 11 2.778 -4.869 33.074 0.330 1.201 2.637 39.886 A A 20 21 -2.603 B B 16 15 2.990 -1.749 0.540 1.445 AA_DT20DG21:DC15DA16_BB 12 -12.145 18.075 38.025 2.296 -2.029 3.600 40.898 A A 21 22 1.361 B B 15 14 3.674 0.932 0.495 -0.956 AA_DG21DC22:DG14DC15_BB 13 14.560 -21.268 38.312 -1.486 1.130 3.702 32.660 A A 22 23 14.407 B B 14 13 4.192 7.936 -0.208 -1.201 AA_DC22DC23:DG13DG14_BB 14 -8.360 15.177 30.610 -3.853 -1.438 2.460 31.193 A A 23 24 19.353 B B 13 12 3.003 10.221 0.081 -1.186 AA_DC23DC24:DG12DG13_BB 15 -1.044 1.976 29.492 -3.878 -0.322 3.438 31.962 A A 24 25 9.679 B B 12 11 3.620 5.304 -0.501 -0.643 AA_DC24DT25:DA11DG12_BB 16 1.644 -3.001 31.488 -2.211 1.233 3.281 33.905 A A 25 26 10.101 B B 11 10 3.308 5.854 0.289 0.046 AA_DT25DC26:DG10DA11_BB 17 3.329 -5.745 33.249 -0.878 0.048 3.385 36.387 A A 26 27 5.485 B B 10 9 3.215 3.417 -1.298 1.001 AA_DC26DA27:DT9DG10_BB 18 -2.977 4.779 36.113 1.121 1.660 3.000 33.200 A E 27 28 8.750 B B 9 8 3.190 4.981 -0.143 -1.084 AE_DA27DG28:DC8DT9_BB 19 -1.114 1.958 32.816 -2.692 0.073 3.244 42.731 E E 28 29 -6.218 B B 8 7 3.192 -4.514 -0.922 0.127 EE_DG28DA29:DT7DC8_BB 20 -4.804 6.618 42.243 0.622 0.790 3.318 34.478 E E 29 30 -1.880 B F 7 6 3.424 -1.109 0.458 -0.515 EE_DA29DC30:DG6DT7_FB 21 -5.793 9.818 33.985 -0.690 -1.707 3.028 29.340 E E 30 31 -10.095 F F 6 5 3.252 -5.072 0.825 0.171 EE_DC30DG31:DC5DG6_FF 22 -4.201 8.361 28.607 1.399 -2.508 4.724 67.539 E E 31 32 -9.810 F F 5 3 4.602 -10.824 -0.805 -0.699 EE_DG31DG32:DA3DC5_FF 23 -11.896 10.782 65.817 -0.025 0.061 4.658 57.567 E E 32 34 -13.383 F F 3 2 5.198 -12.649 -1.173 -0.275 EE_DG32DA34:DT2DA3_FF 24 16.203 -17.144 54.068 0.784 2.587 3.424 36.928 E E 34 35 2.979 F F 2 1 3.431 1.885 -0.261 -0.256 EE_DA34DA35:DT1DT2_FF 25 -2.690 4.253 36.787 -0.672 0.031 3.203 33.832 E E 35 36 -6.935 F F 1 0 3.263 -4.025 0.243 0.178 EE_DA35DT36:DA0DT1_FF 26 -1.818 3.133 33.551 0.950 -0.708 3.115 38.848 E E 36 37 7.740 F F 0 -1 3.097 5.132 0.325 0.482 EE_DT36DT37:DA-1DA0_FF 27 -1.806 2.724 38.480 0.128 -0.699 repository Initial release 1 0 2026-03-18 United States National Science Foundation (NSF, United States) 2310574 christopher.snow@colostate.edu 0000-0002-7690-3519 Christopher Snow D principal investigator/group leader N RCSB Y RCSB 2025-10-31 REL REL MG MAGNESIUM ION 562 Escherichia coli sample 1 21 562 Escherichia coli sample 1 21 562 Escherichia coli sample 1 10 562 Escherichia coli sample 1 10 N N 7RVA PDB experimental model MG 1 6 MG MG 301 C MG 2 6 MG MG 302 C DA 7 n 1 DA 7 A DC 8 n 2 DC 8 A DC 9 n 3 DC 9 A DT 10 n 4 DT 10 A DG 11 n 5 DG 11 A DT 12 n 6 DT 12 A DG 13 n 7 DG 13 A DA 14 n 8 DA 14 A DC 15 n 9 DC 15 A DA 16 n 10 DA 16 A DA 17 n 11 DA 17 A DA 18 n 12 DA 18 A DT 19 n 13 DT 19 A DT 20 n 14 DT 20 A DG 21 n 15 DG 21 A DC 22 n 16 DC 22 A DC 23 n 17 DC 23 A DC 24 n 18 DC 24 A DT 25 n 19 DT 25 A DC 26 n 20 DC 26 A DA 27 n 21 DA 27 A DT 7 n 1 DT 7 B DC 8 n 2 DC 8 B DT 9 n 3 DT 9 B DG 10 n 4 DG 10 B DA 11 n 5 DA 11 B DG 12 n 6 DG 12 B DG 13 n 7 DG 13 B DG 14 n 8 DG 14 B DC 15 n 9 DC 15 B DA 16 n 10 DA 16 B DA 17 n 11 DA 17 B DT 18 n 12 DT 18 B DT 19 n 13 DT 19 B DT 20 n 14 DT 20 B DG 21 n 15 DG 21 B DT 22 n 16 DT 22 B DC 23 n 17 DC 23 B DA 24 n 18 DA 24 B DC 25 n 19 DC 25 B DA 26 n 20 DA 26 B DG 27 n 21 DG 27 B n 1 -11 C n 2 -10 C n 3 -9 C n 4 -8 C n 5 -7 C n 6 -6 C n 7 -5 C n 8 -4 C n 9 -3 C n 10 -2 C n 11 -1 C n 12 0 C n 13 1 C n 14 2 C n 15 3 C n 16 4 C n 17 5 C n 18 6 C n 19 7 C n 20 8 C n 21 9 C n 22 10 C n 23 11 C n 24 12 C n 25 13 C n 26 14 C SER 15 n 27 SER 15 C PRO 16 n 28 PRO 16 C ARG 17 n 29 ARG 17 C ILE 18 n 30 ILE 18 C VAL 19 n 31 VAL 19 C GLN 20 n 32 GLN 20 C SER 21 n 33 SER 21 C ASN 22 n 34 ASN 22 C ASP 23 n 35 ASP 23 C LEU 24 n 36 LEU 24 C THR 25 n 37 THR 25 C GLU 26 n 38 GLU 26 C ALA 27 n 39 ALA 27 C ALA 28 n 40 ALA 28 C TYR 29 n 41 TYR 29 C SER 30 n 42 SER 30 C LEU 31 n 43 LEU 31 C SER 32 n 44 SER 32 C ARG 33 n 45 ARG 33 C ASP 34 n 46 ASP 34 C GLN 35 n 47 GLN 35 C LYS 36 n 48 LYS 36 C ARG 37 n 49 ARG 37 C MET 38 n 50 MET 38 C LEU 39 n 51 LEU 39 C TYR 40 n 52 TYR 40 C LEU 41 n 53 LEU 41 C PHE 42 n 54 PHE 42 C VAL 43 n 55 VAL 43 C ASP 44 n 56 ASP 44 C GLN 45 n 57 GLN 45 C ILE 46 n 58 ILE 46 C ARG 47 n 59 ARG 47 C LYS 48 n 60 LYS 48 C SER 49 n 61 SER 49 C ALA 50 n 62 ASP 50 C n 63 51 C n 64 52 C n 65 53 C n 66 54 C n 67 55 C ALA 56 n 68 HIS 56 C ASP 57 n 69 ASP 57 C GLY 58 n 70 GLY 58 C ILE 59 n 71 ILE 59 C CYS 60 n 72 CYS 60 C GLU 61 n 73 GLU 61 C ILE 62 n 74 ILE 62 C HIS 63 n 75 HIS 63 C VAL 64 n 76 VAL 64 C ALA 65 n 77 ALA 65 C LYS 66 n 78 LYS 66 C TYR 67 n 79 TYR 67 C ALA 68 n 80 ALA 68 C GLU 69 n 81 GLU 69 C ILE 70 n 82 ILE 70 C PHE 71 n 83 PHE 71 C GLY 72 n 84 GLY 72 C LEU 73 n 85 LEU 73 C THR 74 n 86 THR 74 C SER 75 n 87 SER 75 C ALA 76 n 88 ALA 76 C GLU 77 n 89 GLU 77 C ALA 78 n 90 ALA 78 C SER 79 n 91 SER 79 C LYS 80 n 92 LYS 80 C ASP 81 n 93 ASP 81 C ILE 82 n 94 ILE 82 C ARG 83 n 95 ARG 83 C GLN 84 n 96 GLN 84 C ALA 85 n 97 ALA 85 C LEU 86 n 98 LEU 86 C LYS 87 n 99 LYS 87 C SER 88 n 100 SER 88 C PHE 89 n 101 PHE 89 C ALA 90 n 102 ALA 90 C GLY 91 n 103 GLY 91 C LYS 92 n 104 LYS 92 C GLU 93 n 105 GLU 93 C VAL 94 n 106 VAL 94 C VAL 95 n 107 VAL 95 C PHE 96 n 108 PHE 96 C TYR 97 n 109 TYR 97 C ARG 98 n 110 ARG 98 C n 111 99 C n 112 100 C n 113 101 C n 114 102 C n 115 103 C n 116 104 C n 117 105 C n 118 106 C n 119 107 C n 120 108 C TYR 109 n 121 TYR 109 C GLU 110 n 122 GLU 110 C SER 111 n 123 SER 111 C PHE 112 n 124 PHE 112 C PRO 113 n 125 PRO 113 C TRP 114 n 126 TRP 114 C PHE 115 n 127 PHE 115 C ILE 116 n 128 ILE 116 C LYS 117 n 129 LYS 117 C PRO 118 n 130 PRO 118 C ALA 119 n 131 ALA 119 C HIS 120 n 132 HIS 120 C SER 121 n 133 SER 121 C PRO 122 n 134 PRO 122 C SER 123 n 135 SER 123 C ARG 124 n 136 ARG 124 C GLY 125 n 137 GLY 125 C LEU 126 n 138 LEU 126 C TYR 127 n 139 TYR 127 C SER 128 n 140 SER 128 C VAL 129 n 141 VAL 129 C HIS 130 n 142 HIS 130 C ILE 131 n 143 ILE 131 C ASN 132 n 144 ASN 132 C PRO 133 n 145 PRO 133 C TYR 134 n 146 TYR 134 C LEU 135 n 147 LEU 135 C ILE 136 n 148 ILE 136 C PRO 137 n 149 PRO 137 C PHE 138 n 150 PHE 138 C PHE 139 n 151 PHE 139 C ILE 140 n 152 ILE 140 C GLY 141 n 153 GLY 141 C n 154 142 C n 155 143 C n 156 144 C ARG 145 n 157 ARG 145 C PHE 146 n 158 PHE 146 C THR 147 n 159 THR 147 C GLN 148 n 160 GLN 148 C PHE 149 n 161 PHE 149 C ARG 150 n 162 ARG 150 C LEU 151 n 163 LEU 151 C SER 152 n 164 SER 152 C GLU 153 n 165 GLU 153 C THR 154 n 166 THR 154 C LYS 155 n 167 LYS 155 C GLU 156 n 168 GLU 156 C ILE 157 n 169 ILE 157 C THR 158 n 170 THR 158 C ASN 159 n 171 ASN 159 C PRO 160 n 172 PRO 160 C TYR 161 n 173 TYR 161 C ALA 162 n 174 ALA 162 C MET 163 n 175 MET 163 C ARG 164 n 176 ARG 164 C LEU 165 n 177 LEU 165 C TYR 166 n 178 TYR 166 C GLU 167 n 179 GLU 167 C SER 168 n 180 SER 168 C LEU 169 n 181 LEU 169 C CYS 170 n 182 CYS 170 C GLN 171 n 183 GLN 171 C TYR 172 n 184 TYR 172 C ARG 173 n 185 ARG 173 C LYS 174 n 186 LYS 174 C PRO 175 n 187 PRO 175 C ASP 176 n 188 ASP 176 C GLY 177 n 189 GLY 177 C SER 178 n 190 SER 178 C GLY 179 n 191 GLY 179 C ILE 180 n 192 ILE 180 C VAL 181 n 193 VAL 181 C SER 182 n 194 SER 182 C LEU 183 n 195 LEU 183 C LYS 184 n 196 LYS 184 C ILE 185 n 197 ILE 185 C ASP 186 n 198 ASP 186 C TRP 187 n 199 TRP 187 C ILE 188 n 200 ILE 188 C ILE 189 n 201 ILE 189 C GLU 190 n 202 GLU 190 C ARG 191 n 203 ARG 191 C TYR 192 n 204 TYR 192 C GLN 193 n 205 GLN 193 C LEU 194 n 206 LEU 194 C PRO 195 n 207 PRO 195 C GLN 196 n 208 GLN 196 C SER 197 n 209 SER 197 C TYR 198 n 210 TYR 198 C GLN 199 n 211 GLN 199 C ARG 200 n 212 ARG 200 C MET 201 n 213 MET 201 C PRO 202 n 214 PRO 202 C ASP 203 n 215 ASP 203 C PHE 204 n 216 PHE 204 C ARG 205 n 217 ARG 205 C ARG 206 n 218 ARG 206 C ARG 207 n 219 ARG 207 C PHE 208 n 220 PHE 208 C LEU 209 n 221 LEU 209 C GLN 210 n 222 GLN 210 C VAL 211 n 223 VAL 211 C CYS 212 n 224 CYS 212 C VAL 213 n 225 VAL 213 C ASN 214 n 226 ASN 214 C GLU 215 n 227 GLU 215 C ILE 216 n 228 ILE 216 C ASN 217 n 229 ASN 217 C SER 218 n 230 SER 218 C ARG 219 n 231 ARG 219 C THR 220 n 232 THR 220 C PRO 221 n 233 PRO 221 C MET 222 n 234 MET 222 C ARG 223 n 235 ARG 223 C LEU 224 n 236 LEU 224 C SER 225 n 237 SER 225 C TYR 226 n 238 TYR 226 C ILE 227 n 239 ILE 227 C GLU 228 n 240 GLU 228 C LYS 229 n 241 LYS 229 C LYS 230 n 242 LYS 230 C LYS 231 n 243 LYS 231 C GLY 232 n 244 GLY 232 C ARG 233 n 245 ARG 233 C GLN 234 n 246 GLN 234 C THR 235 n 247 THR 235 C THR 236 n 248 THR 236 C HIS 237 n 249 HIS 237 C ILE 238 n 250 ILE 238 C VAL 239 n 251 VAL 239 C PHE 240 n 252 PHE 240 C SER 241 n 253 SER 241 C PHE 242 n 254 PHE 242 C ARG 243 n 255 ARG 243 C ASP 244 n 256 ASP 244 C ILE 245 n 257 ILE 245 C n 258 246 C n 259 247 C n 260 248 C n 261 249 C n 262 250 C n 263 251 C DG 28 n 1 DG 28 E DA 29 n 2 DA 29 E DC 30 n 3 DC 30 E DG 31 n 4 DG 31 E DG 32 n 5 DG 32 E DT 33 n 6 DT 33 E DA 34 n 7 DA 34 E DA 35 n 8 DA 35 E DT 36 n 9 DT 36 E DT 37 n 10 DT 37 E DG -3 n 1 DG -3 F DT -2 n 2 DT -2 F DA -1 n 3 DA -1 F DA 0 n 4 DA 0 F DT 1 n 5 DT 1 F DT 2 n 6 DT 2 F DA 3 n 7 DA 3 F DC 4 n 8 DC 4 F DC 5 n 9 DC 5 F DG 6 n 10 DG 6 F author_defined_assembly 5 pentameric none 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 C N GLN 20 C N GLN 32 C O THR 147 C O THR 159 C N ILE 62 C N ILE 74 C O TYR 127 C O TYR 139 C O SER 128 C O SER 140 C N HIS 120 C N HIS 132 C N PHE 96 C N PHE 108 C O GLU 110 C O GLU 122 C N LEU 183 C N LEU 195 C O ILE 238 C O ILE 250 C O SER 241 C O SER 253 C N SER 225 C N SER 237 1 B C2' DA 11 B C2' DA 5 1 Y 1 C CG ARG 17 C CG ARG 29 1 Y 1 C CD ARG 17 C CD ARG 29 1 Y 1 C NE ARG 17 C NE ARG 29 1 Y 1 C CZ ARG 17 C CZ ARG 29 1 Y 1 C NH1 ARG 17 C NH1 ARG 29 1 Y 1 C NH2 ARG 17 C NH2 ARG 29 1 Y 1 C CG1 VAL 19 C CG1 VAL 31 1 Y 1 C CG2 VAL 19 C CG2 VAL 31 1 Y 1 C NH2 ARG 33 C NH2 ARG 45 1 Y 1 C CD LYS 36 C CD LYS 48 1 Y 1 C CE LYS 36 C CE LYS 48 1 Y 1 C NZ LYS 36 C NZ LYS 48 1 Y 1 C CG MET 38 C CG MET 50 1 Y 1 C SD MET 38 C SD MET 50 1 Y 1 C CE MET 38 C CE MET 50 1 Y 1 C CG1 ILE 46 C CG1 ILE 58 1 Y 1 C CG2 ILE 46 C CG2 ILE 58 1 Y 1 C CD1 ILE 46 C CD1 ILE 58 1 Y 1 C CD ARG 47 C CD ARG 59 1 Y 1 C NE ARG 47 C NE ARG 59 1 Y 1 C CZ ARG 47 C CZ ARG 59 1 Y 1 C NH1 ARG 47 C NH1 ARG 59 1 Y 1 C NH2 ARG 47 C NH2 ARG 59 1 Y 1 C CG LYS 48 C CG LYS 60 1 Y 1 C CD LYS 48 C CD LYS 60 1 Y 1 C CE LYS 48 C CE LYS 60 1 Y 1 C NZ LYS 48 C NZ LYS 60 1 Y 1 C CG ASP 50 C CG ASP 62 1 Y 1 C OD1 ASP 50 C OD1 ASP 62 1 Y 1 C OD2 ASP 50 C OD2 ASP 62 1 Y 1 C CG HIS 56 C CG HIS 68 1 Y 1 C ND1 HIS 56 C ND1 HIS 68 1 Y 1 C CD2 HIS 56 C CD2 HIS 68 1 Y 1 C CE1 HIS 56 C CE1 HIS 68 1 Y 1 C NE2 HIS 56 C NE2 HIS 68 1 Y 1 C CG1 ILE 62 C CG1 ILE 74 1 Y 1 C CG2 ILE 62 C CG2 ILE 74 1 Y 1 C CD1 ILE 62 C CD1 ILE 74 1 Y 1 C CA SER 79 C CA SER 91 1 Y 1 C CG LYS 80 C CG LYS 92 1 Y 1 C CD LYS 80 C CD LYS 92 1 Y 1 C CE LYS 80 C CE LYS 92 1 Y 1 C NZ LYS 80 C NZ LYS 92 1 Y 1 C CG GLN 84 C CG GLN 96 1 Y 1 C CD GLN 84 C CD GLN 96 1 Y 1 C OE1 GLN 84 C OE1 GLN 96 1 Y 1 C NE2 GLN 84 C NE2 GLN 96 1 Y 1 C CG LEU 86 C CG LEU 98 1 Y 1 C CD1 LEU 86 C CD1 LEU 98 1 Y 1 C CD2 LEU 86 C CD2 LEU 98 1 Y 1 C CG PHE 96 C CG PHE 108 1 Y 1 C CD1 PHE 96 C CD1 PHE 108 1 Y 1 C CD2 PHE 96 C CD2 PHE 108 1 Y 1 C CE1 PHE 96 C CE1 PHE 108 1 Y 1 C CE2 PHE 96 C CE2 PHE 108 1 Y 1 C CZ PHE 96 C CZ PHE 108 1 Y 1 C CG ARG 98 C CG ARG 110 1 Y 1 C CD ARG 98 C CD ARG 110 1 Y 1 C NE ARG 98 C NE ARG 110 1 Y 1 C CZ ARG 98 C CZ ARG 110 1 Y 1 C NH1 ARG 98 C NH1 ARG 110 1 Y 1 C NH2 ARG 98 C NH2 ARG 110 1 Y 1 C CG GLU 110 C CG GLU 122 1 Y 1 C CD GLU 110 C CD GLU 122 1 Y 1 C OE1 GLU 110 C OE1 GLU 122 1 Y 1 C OE2 GLU 110 C OE2 GLU 122 1 Y 1 C CG PHE 115 C CG PHE 127 1 Y 1 C CD1 PHE 115 C CD1 PHE 127 1 Y 1 C CD2 PHE 115 C CD2 PHE 127 1 Y 1 C CE1 PHE 115 C CE1 PHE 127 1 Y 1 C CE2 PHE 115 C CE2 PHE 127 1 Y 1 C CZ PHE 115 C CZ PHE 127 1 Y 1 C CE LYS 117 C CE LYS 129 1 Y 1 C NZ LYS 117 C NZ LYS 129 1 Y 1 C CG1 ILE 131 C CG1 ILE 143 1 Y 1 C CG2 ILE 131 C CG2 ILE 143 1 Y 1 C CD1 ILE 131 C CD1 ILE 143 1 Y 1 C CG LEU 135 C CG LEU 147 1 Y 1 C CD1 LEU 135 C CD1 LEU 147 1 Y 1 C CD2 LEU 135 C CD2 LEU 147 1 Y 1 C CG1 ILE 136 C CG1 ILE 148 1 Y 1 C CG2 ILE 136 C CG2 ILE 148 1 Y 1 C CD1 ILE 136 C CD1 ILE 148 1 Y 1 C CG PHE 139 C CG PHE 151 1 Y 1 C CD1 PHE 139 C CD1 PHE 151 1 Y 1 C CD2 PHE 139 C CD2 PHE 151 1 Y 1 C CE1 PHE 139 C CE1 PHE 151 1 Y 1 C CE2 PHE 139 C CE2 PHE 151 1 Y 1 C CZ PHE 139 C CZ PHE 151 1 Y 1 C CG ARG 145 C CG ARG 157 1 Y 1 C CD ARG 145 C CD ARG 157 1 Y 1 C NE ARG 145 C NE ARG 157 1 Y 1 C CZ ARG 145 C CZ ARG 157 1 Y 1 C NH1 ARG 145 C NH1 ARG 157 1 Y 1 C NH2 ARG 145 C NH2 ARG 157 1 Y 1 C OG SER 168 C OG SER 180 1 Y 1 C CD LYS 231 C CD LYS 243 1 Y 1 C CE LYS 231 C CE LYS 243 1 Y 1 C NZ LYS 231 C NZ LYS 243 1 Y 1 C CG ARG 233 C CG ARG 245 1 Y 1 C CD ARG 233 C CD ARG 245 1 Y 1 C NE ARG 233 C NE ARG 245 1 Y 1 C CZ ARG 233 C CZ ARG 245 1 Y 1 C NH1 ARG 233 C NH1 ARG 245 1 Y 1 C NH2 ARG 233 C NH2 ARG 245 1 Y 1 C MET -11 C MET 1 1 Y 1 C ARG -10 C ARG 2 1 Y 1 C GLY -9 C GLY 3 1 Y 1 C SER -8 C SER 4 1 Y 1 C HIS -7 C HIS 5 1 Y 1 C HIS -6 C HIS 6 1 Y 1 C HIS -5 C HIS 7 1 Y 1 C HIS -4 C HIS 8 1 Y 1 C HIS -3 C HIS 9 1 Y 1 C HIS -2 C HIS 10 1 Y 1 C GLY -1 C GLY 11 1 Y 1 C SER 0 C SER 12 1 Y 1 C MET 1 C MET 13 1 Y 1 C ALA 2 C ALA 14 1 Y 1 C GLU 3 C GLU 15 1 Y 1 C THR 4 C THR 16 1 Y 1 C ALA 5 C ALA 17 1 Y 1 C VAL 6 C VAL 18 1 Y 1 C ILE 7 C ILE 19 1 Y 1 C ASN 8 C ASN 20 1 Y 1 C HIS 9 C HIS 21 1 Y 1 C LYS 10 C LYS 22 1 Y 1 C LYS 11 C LYS 23 1 Y 1 C ARG 12 C ARG 24 1 Y 1 C LYS 13 C LYS 25 1 Y 1 C ASN 14 C ASN 26 1 Y 1 C GLY 51 C GLY 63 1 Y 1 C THR 52 C THR 64 1 Y 1 C LEU 53 C LEU 65 1 Y 1 C GLN 54 C GLN 66 1 Y 1 C GLU 55 C GLU 67 1 Y 1 C PRO 99 C PRO 111 1 Y 1 C GLU 100 C GLU 112 1 Y 1 C GLU 101 C GLU 113 1 Y 1 C ASP 102 C ASP 114 1 Y 1 C ALA 103 C ALA 115 1 Y 1 C GLY 104 C GLY 116 1 Y 1 C ASP 105 C ASP 117 1 Y 1 C GLU 106 C GLU 118 1 Y 1 C LYS 107 C LYS 119 1 Y 1 C GLY 108 C GLY 120 1 Y 1 C LEU 142 C LEU 154 1 Y 1 C GLN 143 C GLN 155 1 Y 1 C ASN 144 C ASN 156 1 Y 1 C THR 246 C THR 258 1 Y 1 C SER 247 C SER 259 1 Y 1 C MET 248 C MET 260 1 Y 1 C THR 249 C THR 261 1 Y 1 C THR 250 C THR 262 1 Y 1 C GLY 251 C GLY 263 1 Y 1 C LYS 48 -105.38 79.79 1 C ALA 78 -67.88 -71.36 1 C PHE 208 -106.79 -66.89 181.73 0.2537 0.2398 0.2413 4.22 37.31 940 8465 9405 9.99 97.62 0.5253 1 FREE R-VALUE 1.34 MOLECULAR REPLACEMENT 32.4688 0.9000 1.1000 GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 4.22 37.31 0 2946 2 1270 1674 0.0045 3169 0.6157 4488 0.0414 499 0.0057 372 25.0552 1310 0.4238 0.3558 4.44 117 1068 86.56 0.3635 0.3315 4.72 137 1222 99.27 0.2985 0.2671 5.08 135 1222 99.56 0.2418 0.2381 5.59 136 1226 99.78 0.2353 0.2443 6.40 137 1238 99.93 0.2588 0.2408 8.05 139 1239 99.57 0.1946 0.1903 37.31 139 1250 98.72 146.58 4.22 37.31 9Z08 19241 0.996 0.08912 0.08912 0.126 1 3.51 1.0 97.62 1.3 4.22 4.44 0.76 1042 0.465 1.3 1.839 1 1.0 86.56 refinement PHENIX 1.21.2_5419 data reduction XDS data scaling XSCALE phasing PHASER model building Coot 5 monoclinic I 1 2 1 C 2y (x,y,-x+z) x,y,z -x,y,-z x+1/2,y+1/2,z+1/2 -x+1/2,y+1/2,-z+1/2 N Isoreticular co-crystal 1 with asymmetrical expanded duplex (31mer) containing separate insert strand with sequence GACGGTAATT 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N C ASN 22 C ASN 34 HELX_P C GLU 26 C GLU 38 1 AA1 5 C SER 32 C SER 44 HELX_P C LYS 48 C LYS 60 1 AA2 17 C VAL 64 C VAL 76 HELX_P C GLY 72 C GLY 84 1 AA3 9 C ALA 76 C ALA 88 HELX_P C PHE 89 C PHE 101 1 AA4 14 C ASN 132 C ASN 144 HELX_P C TYR 134 C TYR 146 5 AA5 3 C LEU 135 C LEU 147 HELX_P C ILE 140 C ILE 152 1 AA6 6 C SER 152 C SER 164 HELX_P C THR 154 C THR 166 5 AA7 3 C ASN 159 C ASN 171 HELX_P C TYR 172 C TYR 184 1 AA8 14 C ILE 185 C ILE 197 HELX_P C GLN 193 C GLN 205 1 AA9 9 C PRO 195 C PRO 207 HELX_P C GLN 199 C GLN 211 5 AB1 5 C ARG 200 C ARG 212 HELX_P C PHE 208 C PHE 220 1 AB2 9 C PHE 208 C PHE 220 HELX_P C THR 220 C THR 232 1 AB3 13 metalc 2.101 C GLU 77 C OE2 GLU 89 1_555 C MG 301 F MG MG 1_555 hydrog WATSON-CRICK A DC 9 A N3 DC 3 1_555 B DG 27 B N1 DG 21 1_555 hydrog WATSON-CRICK A DC 9 A N4 DC 3 1_555 B DG 27 B O6 DG 21 1_555 hydrog WATSON-CRICK A DC 9 A O2 DC 3 1_555 B DG 27 B N2 DG 21 1_555 hydrog WATSON-CRICK A DT 10 A N3 DT 4 1_555 B DA 26 B N1 DA 20 1_555 hydrog WATSON-CRICK A DT 10 A O4 DT 4 1_555 B DA 26 B N6 DA 20 1_555 hydrog WATSON-CRICK A DG 11 A N1 DG 5 1_555 B DC 25 B N3 DC 19 1_555 hydrog WATSON-CRICK A DG 11 A N2 DG 5 1_555 B DC 25 B O2 DC 19 1_555 hydrog WATSON-CRICK A DG 11 A O6 DG 5 1_555 B DC 25 B N4 DC 19 1_555 hydrog WATSON-CRICK A DT 12 A N3 DT 6 1_555 B DA 24 B N1 DA 18 1_555 hydrog WATSON-CRICK A DT 12 A O4 DT 6 1_555 B DA 24 B N6 DA 18 1_555 hydrog WATSON-CRICK A DG 13 A N1 DG 7 1_555 B DC 23 B N3 DC 17 1_555 hydrog WATSON-CRICK A DG 13 A N2 DG 7 1_555 B DC 23 B O2 DC 17 1_555 hydrog WATSON-CRICK A DG 13 A O6 DG 7 1_555 B DC 23 B N4 DC 17 1_555 hydrog WATSON-CRICK A DA 14 A N1 DA 8 1_555 B DT 22 B N3 DT 16 1_555 hydrog WATSON-CRICK A DA 14 A N6 DA 8 1_555 B DT 22 B O4 DT 16 1_555 hydrog WATSON-CRICK A DC 15 A N3 DC 9 1_555 B DG 21 B N1 DG 15 1_555 hydrog WATSON-CRICK A DC 15 A N4 DC 9 1_555 B DG 21 B O6 DG 15 1_555 hydrog WATSON-CRICK A DC 15 A O2 DC 9 1_555 B DG 21 B N2 DG 15 1_555 hydrog WATSON-CRICK A DA 16 A N1 DA 10 1_555 B DT 20 B N3 DT 14 1_555 hydrog WATSON-CRICK A DA 16 A N6 DA 10 1_555 B DT 20 B O4 DT 14 1_555 hydrog WATSON-CRICK A DA 17 A N1 DA 11 1_555 B DT 19 B N3 DT 13 1_555 hydrog WATSON-CRICK A DA 17 A N6 DA 11 1_555 B DT 19 B O4 DT 13 1_555 hydrog WATSON-CRICK A DA 18 A N1 DA 12 1_555 B DT 18 B N3 DT 12 1_555 hydrog WATSON-CRICK A DA 18 A N6 DA 12 1_555 B DT 18 B O4 DT 12 1_555 hydrog WATSON-CRICK A DT 19 A N3 DT 13 1_555 B DA 17 B N1 DA 11 1_555 hydrog WATSON-CRICK A DT 19 A O4 DT 13 1_555 B DA 17 B N6 DA 11 1_555 hydrog WATSON-CRICK A DT 20 A N3 DT 14 1_555 B DA 16 B N1 DA 10 1_555 hydrog WATSON-CRICK A DT 20 A O4 DT 14 1_555 B DA 16 B N6 DA 10 1_555 hydrog WATSON-CRICK A DG 21 A N1 DG 15 1_555 B DC 15 B N3 DC 9 1_555 hydrog WATSON-CRICK A DG 21 A N2 DG 15 1_555 B DC 15 B O2 DC 9 1_555 hydrog WATSON-CRICK A DG 21 A O6 DG 15 1_555 B DC 15 B N4 DC 9 1_555 hydrog WATSON-CRICK A DC 22 A N3 DC 16 1_555 B DG 14 B N1 DG 8 1_555 hydrog WATSON-CRICK A DC 22 A N4 DC 16 1_555 B DG 14 B O6 DG 8 1_555 hydrog WATSON-CRICK A DC 22 A O2 DC 16 1_555 B DG 14 B N2 DG 8 1_555 hydrog WATSON-CRICK A DC 23 A N3 DC 17 1_555 B DG 13 B N1 DG 7 1_555 hydrog WATSON-CRICK A DC 23 A N4 DC 17 1_555 B DG 13 B O6 DG 7 1_555 hydrog WATSON-CRICK A DC 23 A O2 DC 17 1_555 B DG 13 B N2 DG 7 1_555 hydrog WATSON-CRICK A DC 24 A N3 DC 18 1_555 B DG 12 B N1 DG 6 1_555 hydrog WATSON-CRICK A DC 24 A N4 DC 18 1_555 B DG 12 B O6 DG 6 1_555 hydrog WATSON-CRICK A DC 24 A O2 DC 18 1_555 B DG 12 B N2 DG 6 1_555 hydrog WATSON-CRICK A DT 25 A N3 DT 19 1_555 B DA 11 B N1 DA 5 1_555 hydrog WATSON-CRICK A DT 25 A O4 DT 19 1_555 B DA 11 B N6 DA 5 1_555 hydrog WATSON-CRICK A DC 26 A N3 DC 20 1_555 B DG 10 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 26 A N4 DC 20 1_555 B DG 10 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 26 A O2 DC 20 1_555 B DG 10 B N2 DG 4 1_555 hydrog WATSON-CRICK A DA 27 A N1 DA 21 1_555 B DT 9 B N3 DT 3 1_555 hydrog WATSON-CRICK A DA 27 A N6 DA 21 1_555 B DT 9 B O4 DT 3 1_555 hydrog WATSON-CRICK B DT 7 B N3 DT 1 1_555 E DA 29 D N1 DA 2 1_555 hydrog WATSON-CRICK B DT 7 B O4 DT 1 1_555 E DA 29 D N6 DA 2 1_555 hydrog WATSON-CRICK B DC 8 B N3 DC 2 1_555 E DG 28 D N1 DG 1 1_555 hydrog WATSON-CRICK B DC 8 B N4 DC 2 1_555 E DG 28 D O6 DG 1 1_555 hydrog WATSON-CRICK B DC 8 B O2 DC 2 1_555 E DG 28 D N2 DG 1 1_555 hydrog WATSON-CRICK E DC 30 D N3 DC 3 1_555 F DG 6 E N1 DG 10 1_555 hydrog WATSON-CRICK E DC 30 D N4 DC 3 1_555 F DG 6 E O6 DG 10 1_555 hydrog WATSON-CRICK E DC 30 D O2 DC 3 1_555 F DG 6 E N2 DG 10 1_555 hydrog DG-DC PAIR E DG 31 D N1 DG 4 1_555 F DC 5 E O2 DC 9 1_555 hydrog TYPE_8_PAIR E DG 32 D N1 DG 5 1_555 F DA 3 E N1 DA 7 1_555 hydrog TYPE_8_PAIR E DG 32 D O6 DG 5 1_555 F DA 3 E N6 DA 7 1_555 hydrog DT-DA PAIR E DT 33 D N3 DT 6 1_555 F DA 3 E N1 DA 7 1_555 hydrog WATSON-CRICK E DA 34 D N1 DA 7 1_555 F DT 2 E N3 DT 6 1_555 hydrog WATSON-CRICK E DA 34 D N6 DA 7 1_555 F DT 2 E O4 DT 6 1_555 hydrog WATSON-CRICK E DA 35 D N1 DA 8 1_555 F DT 1 E N3 DT 5 1_555 hydrog WATSON-CRICK E DA 35 D N6 DA 8 1_555 F DT 1 E O4 DT 5 1_555 hydrog WATSON-CRICK E DT 36 D N3 DT 9 1_555 F DA 0 E N1 DA 4 1_555 hydrog WATSON-CRICK E DT 36 D O4 DT 9 1_555 F DA 0 E N6 DA 4 1_555 hydrog WATSON-CRICK E DT 37 D N3 DT 10 1_555 F DA -1 E N1 DA 3 1_555 hydrog WATSON-CRICK E DT 37 D O4 DT 10 1_555 F DA -1 E N6 DA 3 1_555 DNA BINDING PROTEIN/DNA Protein-DNA complex, DNA Binding protein, Transcription factor, DNA BINDING PROTEIN-DNA complex 9Z08 PDB 1 1 9Z08 9Z08 PDB 2 1 9Z08 REPE1_ECOLI UNP 3 1 P03856 MAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASK DIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNP YAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVF SFRDITSMTTG 9Z08 PDB 4 1 9Z08 9Z08 PDB 5 1 9Z08 7 27 9Z08 7 27 9Z08 A 1 1 21 7 27 9Z08 7 27 9Z08 B 2 1 21 1 251 9Z08 1 251 P03856 C 3 13 263 28 37 9Z08 28 37 9Z08 E 4 1 10 -3 6 9Z08 -3 6 9Z08 F 5 1 10 3 initiating methionine MET -11 9Z08 C P03856 UNP 1 3 expression tag ARG -10 9Z08 C P03856 UNP 2 3 expression tag GLY -9 9Z08 C P03856 UNP 3 3 expression tag SER -8 9Z08 C P03856 UNP 4 3 expression tag HIS -7 9Z08 C P03856 UNP 5 3 expression tag HIS -6 9Z08 C P03856 UNP 6 3 expression tag HIS -5 9Z08 C P03856 UNP 7 3 expression tag HIS -4 9Z08 C P03856 UNP 8 3 expression tag HIS -3 9Z08 C P03856 UNP 9 3 expression tag HIS -2 9Z08 C P03856 UNP 10 3 expression tag GLY -1 9Z08 C P03856 UNP 11 3 expression tag SER 0 9Z08 C P03856 UNP 12 3 ARG conflict PRO 118 9Z08 C P03856 UNP 118 130 2 3 2 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel C ARG 17 C ARG 29 C SER 21 C SER 33 C PHE 146 C PHE 158 C ARG 150 C ARG 162 C ILE 59 C ILE 71 C HIS 63 C HIS 75 C LEU 126 C LEU 138 C HIS 130 C HIS 142 C HIS 120 C HIS 132 C SER 123 C SER 135 C GLU 93 C GLU 105 C PHE 96 C PHE 108 C GLU 110 C GLU 122 C PRO 113 C PRO 125 C GLY 179 C GLY 191 C LYS 184 C LYS 196 C GLN 234 C GLN 246 C ASP 244 C ASP 256 C MET 222 C MET 234 C LYS 231 C LYS 243 5 I 1 2 1 C 2y (x,y,-x+z)