0.010764 0.000000 0.000000 0.000000 0.010764 0.000000 0.000000 0.000000 0.010764 0.00000 0.00000 0.00000 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.01032 2.96436 19.97189 1.75589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.49882 3.47563 15.80542 1.70748 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.55732 6.39887 1.23737 29.19336 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 24.64596 5.25405 2.14387 29.76375 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. Mun, S.A. Park, J. Kang, J.Y. Park, T. Jin, M. Yang, J. Eom, S.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.000 90.000 90.000 92.900 92.900 92.900 801759.911 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub N 322 N sing Y 323 N doub N 324 N sing Y 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing UK Iucrj 2052-2525 10 233 245 10.1107/S2052252523001501 36862489 Structural and biochemical insights into Zn 2+ -bound EF-hand proteins, EFhd1 and EFhd2. 2023 0000-0002-2614-2221 0000-0003-2564-5422 0000-0002-7779-9282 0000-0003-0076-4345 0000-0002-1272-5805 10.2210/pdb7ygy/pdb pdb_00007ygy 100 1 N PIXEL 2021-03-06 DECTRIS EIGER X 9M SINGLE WAVELENGTH M x-ray 1 1.2851 1.0 5C (4A) PAL/PLS 1.2851 SYNCHROTRON PAL/PLS BEAMLINE 5C (4A) [GAMGS + EFhd2(70-184)] - GAMGS: the cleaved site after GST-TEV tag cleavage - GEPQSPSRRVFN: Part of PR domain in EFhd2, disordered - DVSS: disordered 13709.742 EF-hand domain-containing protein D2 UNP RESIDUES 70-184 1 man polymer 65.409 ZINC ION 3 syn non-polymer 18.015 water 5 nat water Swiprosin-1 no no GAMGSGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDF DSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSS GAMGSGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDF DSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 1 120 EFHD2, SWS1 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) Biological sequence 1 2.47 50.2 VAPOR DIFFUSION, SITTING DROP 0.1 M HEPES-NaOH pH 7.5, 25% (w/v) PEG 8000 293 chem_comp_atom chem_comp_bond repository Initial release Data collection 1 0 2023-03-15 1 1 2024-05-29 Korea, Republic Of National Research Foundation (NRF, Korea) NRF-2021R1A2C1006267 Korea, Republic Of Other private GIST Research Institute (GRI) IIBR eom@gist.ac.kr 0000-0002-1272-5805 Soo Hyun Eom principal investigator/group leader N PDBJ Y PDBJ 2022-07-12 REL REL ZN ZN SUBJECT OF INVESTIGATION ZN ZINC ION HOH water Y 5i2l Ca2+-bound EFhd2 PDB experimental model ZN 1 2 ZN ZN 201 A ZN 2 2 ZN ZN 202 A ZN 3 2 ZN ZN 203 A HOH 5 3 HOH HOH 301 A HOH 2 3 HOH HOH 302 A HOH 1 3 HOH HOH 303 A HOH 4 3 HOH HOH 304 A HOH 3 3 HOH HOH 305 A n 1 65 A n 2 66 A n 3 67 A n 4 68 A n 5 69 A n 6 70 A n 7 71 A n 8 72 A n 9 73 A n 10 74 A n 11 75 A n 12 76 A n 13 77 A n 14 78 A n 15 79 A n 16 80 A n 17 81 A PRO 82 n 18 PRO 82 A TYR 83 n 19 TYR 83 A THR 84 n 20 THR 84 A GLU 85 n 21 GLU 85 A PHE 86 n 22 PHE 86 A LYS 87 n 23 LYS 87 A GLU 88 n 24 GLU 88 A PHE 89 n 25 PHE 89 A SER 90 n 26 SER 90 A ARG 91 n 27 ARG 91 A LYS 92 n 28 LYS 92 A GLN 93 n 29 GLN 93 A ILE 94 n 30 ILE 94 A LYS 95 n 31 LYS 95 A ASP 96 n 32 ASP 96 A MET 97 n 33 MET 97 A GLU 98 n 34 GLU 98 A LYS 99 n 35 LYS 99 A MET 100 n 36 MET 100 A PHE 101 n 37 PHE 101 A LYS 102 n 38 LYS 102 A GLN 103 n 39 GLN 103 A TYR 104 n 40 TYR 104 A ASP 105 n 41 ASP 105 A ALA 106 n 42 ALA 106 A GLY 107 n 43 GLY 107 A ARG 108 n 44 ARG 108 A ASP 109 n 45 ASP 109 A GLY 110 n 46 GLY 110 A PHE 111 n 47 PHE 111 A ILE 112 n 48 ILE 112 A ASP 113 n 49 ASP 113 A LEU 114 n 50 LEU 114 A MET 115 n 51 MET 115 A GLU 116 n 52 GLU 116 A LEU 117 n 53 LEU 117 A LYS 118 n 54 LYS 118 A LEU 119 n 55 LEU 119 A MET 120 n 56 MET 120 A MET 121 n 57 MET 121 A GLU 122 n 58 GLU 122 A LYS 123 n 59 LYS 123 A LEU 124 n 60 LEU 124 A GLY 125 n 61 GLY 125 A ALA 126 n 62 ALA 126 A PRO 127 n 63 PRO 127 A GLN 128 n 64 GLN 128 A THR 129 n 65 THR 129 A HIS 130 n 66 HIS 130 A LEU 131 n 67 LEU 131 A GLY 132 n 68 GLY 132 A LEU 133 n 69 LEU 133 A LYS 134 n 70 LYS 134 A ASN 135 n 71 ASN 135 A MET 136 n 72 MET 136 A ILE 137 n 73 ILE 137 A LYS 138 n 74 LYS 138 A GLU 139 n 75 GLU 139 A VAL 140 n 76 VAL 140 A ASP 141 n 77 ASP 141 A GLU 142 n 78 GLU 142 A ASP 143 n 79 ASP 143 A PHE 144 n 80 PHE 144 A ASP 145 n 81 ASP 145 A SER 146 n 82 SER 146 A LYS 147 n 83 LYS 147 A LEU 148 n 84 LEU 148 A SER 149 n 85 SER 149 A PHE 150 n 86 PHE 150 A ARG 151 n 87 ARG 151 A GLU 152 n 88 GLU 152 A PHE 153 n 89 PHE 153 A LEU 154 n 90 LEU 154 A LEU 155 n 91 LEU 155 A ILE 156 n 92 ILE 156 A PHE 157 n 93 PHE 157 A ARG 158 n 94 ARG 158 A LYS 159 n 95 LYS 159 A ALA 160 n 96 ALA 160 A ALA 161 n 97 ALA 161 A ALA 162 n 98 ALA 162 A GLY 163 n 99 GLY 163 A GLU 164 n 100 GLU 164 A LEU 165 n 101 LEU 165 A GLN 166 n 102 GLN 166 A GLU 167 n 103 GLU 167 A ASP 168 n 104 ASP 168 A SER 169 n 105 SER 169 A GLY 170 n 106 GLY 170 A LEU 171 n 107 LEU 171 A CYS 172 n 108 CYS 172 A VAL 173 n 109 VAL 173 A LEU 174 n 110 LEU 174 A ALA 175 n 111 ALA 175 A ARG 176 n 112 ARG 176 A LEU 177 n 113 LEU 177 A SER 178 n 114 SER 178 A GLU 179 n 115 GLU 179 A ILE 180 n 116 ILE 180 A n 117 181 A n 118 182 A n 119 183 A n 120 184 A author_and_software_defined_assembly PISA 1 monomeric gel filtration 70 -18 5830 A ASP 105 A OD1 ASP 41 1_555 A ZN 203 D ZN ZN 1_555 A ASP 109 A OD1 ASP 45 1_555 84.9 A ASP 105 A OD1 ASP 41 1_555 A ZN 203 D ZN ZN 1_555 A PHE 111 A O PHE 47 1_555 85.0 A ASP 109 A OD1 ASP 45 1_555 A ZN 203 D ZN ZN 1_555 A PHE 111 A O PHE 47 1_555 84.2 A ASP 105 A OD1 ASP 41 1_555 A ZN 203 D ZN ZN 1_555 A GLU 116 A OE1 GLU 52 1_555 99.6 A ASP 109 A OD1 ASP 45 1_555 A ZN 203 D ZN ZN 1_555 A GLU 116 A OE1 GLU 52 1_555 169.3 A PHE 111 A O PHE 47 1_555 A ZN 203 D ZN ZN 1_555 A GLU 116 A OE1 GLU 52 1_555 86.6 A HIS 130 A NE2 HIS 66 1_555 A ZN 202 C ZN ZN 1_555 A LYS 134 A NZ LYS 70 1_555 135.5 A HIS 130 A NE2 HIS 66 1_555 A ZN 202 C ZN ZN 1_555 A GLU 167 A OE1 GLU 103 1_555 66.1 A LYS 134 A NZ LYS 70 1_555 A ZN 202 C ZN ZN 1_555 A GLU 167 A OE1 GLU 103 1_555 73.2 A HIS 130 A NE2 HIS 66 1_555 A ZN 202 C ZN ZN 1_555 A GLU 167 A OE2 GLU 103 1_555 67.7 A LYS 134 A NZ LYS 70 1_555 A ZN 202 C ZN ZN 1_555 A GLU 167 A OE2 GLU 103 1_555 70.6 A GLU 167 A OE1 GLU 103 1_555 A ZN 202 C ZN ZN 1_555 A GLU 167 A OE2 GLU 103 1_555 4.0 A HIS 130 A NE2 HIS 66 1_555 A ZN 202 C ZN ZN 1_555 A GLU 179 A OE2 GLU 115 1_555 34.9 A LYS 134 A NZ LYS 70 1_555 A ZN 202 C ZN ZN 1_555 A GLU 179 A OE2 GLU 115 1_555 100.7 A GLU 167 A OE1 GLU 103 1_555 A ZN 202 C ZN ZN 1_555 A GLU 179 A OE2 GLU 115 1_555 38.5 A GLU 167 A OE2 GLU 103 1_555 A ZN 202 C ZN ZN 1_555 A GLU 179 A OE2 GLU 115 1_555 38.3 A ASP 141 A OD1 ASP 77 1_555 A ZN 201 B ZN ZN 1_555 A ASP 143 A OD1 ASP 79 1_555 80.3 A ASP 141 A OD1 ASP 77 1_555 A ZN 201 B ZN ZN 1_555 A ASP 145 A OD1 ASP 81 1_555 89.1 A ASP 143 A OD1 ASP 79 1_555 A ZN 201 B ZN ZN 1_555 A ASP 145 A OD1 ASP 81 1_555 69.8 A ASP 141 A OD1 ASP 77 1_555 A ZN 201 B ZN ZN 1_555 A LYS 147 A O LYS 83 1_555 99.7 A ASP 143 A OD1 ASP 79 1_555 A ZN 201 B ZN ZN 1_555 A LYS 147 A O LYS 83 1_555 148.4 A ASP 145 A OD1 ASP 81 1_555 A ZN 201 B ZN ZN 1_555 A LYS 147 A O LYS 83 1_555 78.6 A ASP 141 A OD1 ASP 77 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE1 GLU 88 1_555 129.6 A ASP 143 A OD1 ASP 79 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE1 GLU 88 1_555 114.6 A ASP 145 A OD1 ASP 81 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE1 GLU 88 1_555 141.2 A LYS 147 A O LYS 83 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE1 GLU 88 1_555 90.0 A ASP 141 A OD1 ASP 77 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE2 GLU 88 1_555 88.9 A ASP 143 A OD1 ASP 79 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE2 GLU 88 1_555 78.7 A ASP 145 A OD1 ASP 81 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE2 GLU 88 1_555 148.4 A LYS 147 A O LYS 83 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE2 GLU 88 1_555 132.8 A GLU 152 A OE1 GLU 88 1_555 A ZN 201 B ZN ZN 1_555 A GLU 152 A OE2 GLU 88 1_555 51.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 112 A N ILE 48 A O LEU 148 A O LEU 84 1 A CG LYS 87 A CG LYS 23 1 Y 1 A CD LYS 87 A CD LYS 23 1 Y 1 A CE LYS 87 A CE LYS 23 1 Y 1 A NZ LYS 87 A NZ LYS 23 1 Y 1 A CG LYS 99 A CG LYS 35 1 Y 1 A CD LYS 99 A CD LYS 35 1 Y 1 A CE LYS 99 A CE LYS 35 1 Y 1 A NZ LYS 99 A NZ LYS 35 1 Y 1 A CG LYS 102 A CG LYS 38 1 Y 1 A CD LYS 102 A CD LYS 38 1 Y 1 A CE LYS 102 A CE LYS 38 1 Y 1 A NZ LYS 102 A NZ LYS 38 1 Y 1 A CG ARG 108 A CG ARG 44 1 Y 1 A CD ARG 108 A CD ARG 44 1 Y 1 A NE ARG 108 A NE ARG 44 1 Y 1 A CZ ARG 108 A CZ ARG 44 1 Y 1 A NH1 ARG 108 A NH1 ARG 44 1 Y 1 A NH2 ARG 108 A NH2 ARG 44 1 Y 1 A CG LYS 138 A CG LYS 74 1 Y 1 A CD LYS 138 A CD LYS 74 1 Y 1 A CE LYS 138 A CE LYS 74 1 Y 1 A NZ LYS 138 A NZ LYS 74 1 Y 1 A CG LYS 147 A CG LYS 83 1 Y 1 A CD LYS 147 A CD LYS 83 1 Y 1 A CE LYS 147 A CE LYS 83 1 Y 1 A NZ LYS 147 A NZ LYS 83 1 Y 1 A CG ARG 151 A CG ARG 87 1 Y 1 A CD ARG 151 A CD ARG 87 1 Y 1 A NE ARG 151 A NE ARG 87 1 Y 1 A CZ ARG 151 A CZ ARG 87 1 Y 1 A NH1 ARG 151 A NH1 ARG 87 1 Y 1 A NH2 ARG 151 A NH2 ARG 87 1 Y 1 A GLY 65 A GLY 1 1 Y 1 A ALA 66 A ALA 2 1 Y 1 A MET 67 A MET 3 1 Y 1 A GLY 68 A GLY 4 1 Y 1 A SER 69 A SER 5 1 Y 1 A GLY 70 A GLY 6 1 Y 1 A GLU 71 A GLU 7 1 Y 1 A PRO 72 A PRO 8 1 Y 1 A GLN 73 A GLN 9 1 Y 1 A SER 74 A SER 10 1 Y 1 A PRO 75 A PRO 11 1 Y 1 A SER 76 A SER 12 1 Y 1 A ARG 77 A ARG 13 1 Y 1 A ARG 78 A ARG 14 1 Y 1 A VAL 79 A VAL 15 1 Y 1 A PHE 80 A PHE 16 1 Y 1 A ASN 81 A ASN 17 1 Y 1 A ASP 181 A ASP 117 1 Y 1 A VAL 182 A VAL 118 1 Y 1 A SER 183 A SER 119 1 Y 1 A SER 184 A SER 120 1 Y 1 A ARG 108 73.49 40.55 1 A PHE 144 51.76 14.98 1 A GLU 179 -110.64 58.27 67.33 0.2595 0.2288 0.2304 2.60 46.45 209 4026 4235 4.94 99.83 0.2248 1 FREE R-VALUE 1.39 MOLECULAR REPLACEMENT 27.6291 0.9000 1.1100 5I2L GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 2.60 46.45 5 783 3 0 775 0.0104 787 1.1842 1053 0.0580 115 0.0086 137 18.7644 294 0.2595 0.2288 46.45 209 4026 99.83 71.70 2.60 65.67 7YGY 4243 1.00 1 40.3 80.8 100.0 2.60 2.72 518 0.960 1 data reduction DIALS data scaling Aimless phasing PHENIX 1.20.1-4487 model building Coot 0.8.6.1 refinement PHENIX 1.20.1-4487 197 cubic I 2 3 I 2 2 3 x,y,z z,x,y y,z,x -y,-z,x z,-x,-y -y,z,-x -z,-x,y -z,x,-y y,-z,-x x,-y,-z -x,y,-z -x,-y,z x+1/2,y+1/2,z+1/2 z+1/2,x+1/2,y+1/2 y+1/2,z+1/2,x+1/2 -y+1/2,-z+1/2,x+1/2 z+1/2,-x+1/2,-y+1/2 -y+1/2,z+1/2,-x+1/2 -z+1/2,-x+1/2,y+1/2 -z+1/2,x+1/2,-y+1/2 y+1/2,-z+1/2,-x+1/2 x+1/2,-y+1/2,-z+1/2 -x+1/2,y+1/2,-z+1/2 -x+1/2,-y+1/2,z+1/2 N Crystal structure of the Zn2+-bound EFhd2/Swiprosin-1 1 N N 2 N N 2 N N 2 N N 3 N N A SER 90 A SER 26 HELX_P A ASP 105 A ASP 41 1 AA1 16 A ASP 113 A ASP 49 HELX_P A LEU 124 A LEU 60 1 AA2 12 A THR 129 A THR 65 HELX_P A ASP 141 A ASP 77 1 AA3 13 A PHE 150 A PHE 86 HELX_P A ALA 162 A ALA 98 1 AA4 13 A SER 169 A SER 105 HELX_P A SER 178 A SER 114 1 AA5 10 metalc 2.238 A ASP 105 A OD1 ASP 41 1_555 A ZN 203 D ZN ZN 1_555 metalc 2.420 A ASP 109 A OD1 ASP 45 1_555 A ZN 203 D ZN ZN 1_555 metalc 2.113 A PHE 111 A O PHE 47 1_555 A ZN 203 D ZN ZN 1_555 metalc 1.966 A GLU 116 A OE1 GLU 52 1_555 A ZN 203 D ZN ZN 1_555 metalc 2.311 A HIS 130 A NE2 HIS 66 1_555 A ZN 202 C ZN ZN 1_555 metalc 2.497 A LYS 134 A NZ LYS 70 1_555 A ZN 202 C ZN ZN 1_555 metalc 2.318 A ASP 141 A OD1 ASP 77 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.393 A ASP 143 A OD1 ASP 79 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.127 A ASP 145 A OD1 ASP 81 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.541 A LYS 147 A O LYS 83 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.541 A GLU 152 A OE1 GLU 88 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.467 A GLU 152 A OE2 GLU 88 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.368 A GLU 167 A OE1 GLU 103 1_555 A ZN 202 C ZN ZN 21_445 metalc 2.606 A GLU 167 A OE2 GLU 103 1_555 A ZN 202 C ZN ZN 21_445 metalc 2.416 A GLU 179 A OE2 GLU 115 1_555 A ZN 202 C ZN ZN 24_455 METAL BINDING PROTEIN metal binding protein, EF-hand containing protein, cytosol EFHD2_HUMAN UNP 1 70 Q96C19 GEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLS FREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSS 70 184 7YGY 70 184 Q96C19 A 1 6 120 1 expression tag GLY 65 7YGY A Q96C19 UNP 1 1 expression tag ALA 66 7YGY A Q96C19 UNP 2 1 expression tag MET 67 7YGY A Q96C19 UNP 3 1 expression tag GLY 68 7YGY A Q96C19 UNP 4 1 expression tag SER 69 7YGY A Q96C19 UNP 5 2 anti-parallel A PHE 111 A PHE 47 A ILE 112 A ILE 48 A LEU 148 A LEU 84 A SER 149 A SER 85 197 I 2 3 I 2 2 3