0.010853 0.006266 0.000000 0.000000 0.012532 0.000000 0.000000 0.000000 0.005272 0.00000 0.00000 0.00000 6 6 2.3103 1.0201 1.5888 0.8651 20.8439 10.2075 0.5687 51.6512 0.2156 1 1 0.4930 0.3229 0.1402 0.0408 10.5109 26.1257 3.1424 57.7997 0.0030 25 25 11.2854 7.3596 3.0202 2.2448 5.3409 0.3432 17.8674 83.7543 1.3734 7 7 12.2220 3.1346 2.0141 1.1672 0.0057 9.8933 28.9975 0.5826 -11.5379 8 8 3.0487 2.2870 1.5464 0.8671 13.2771 5.7011 0.3239 32.9089 0.2508 15 15 6.4348 4.1793 1.7801 1.4909 1.9067 27.1570 0.5260 68.1645 1.2732 16 16 6.9054 5.2035 1.4379 1.5863 1.4679 22.2151 0.2536 56.1720 1.0555 0000-0002-5189-7036 Wu, E.Y. Walsh, A.R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 92.140 92.140 189.690 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O6 P 331.222 n 2',3'-DIDEOXY-GUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C10 H16 N5 O12 P3 491.182 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mn 2 54.938 MANGANESE (II) ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C20 H28 N4 O15 P2 626.402 n CIS-SYN CYCLOBUTANE THYMINE DIMER [(3S,4S,9S,10R,12R,15AR,18BS,18CS)-3,7-DIHYDROXY-15A,15B-DIMETHYL-7-OXIDO-13,15,16,18-TETRAOXOHEXADECAHYDRO-1H-1,4-EPOX Y-9,12-METHANO-6,8,11-TRIOXA-12A,14,17,18A-TETRAAZA-7-PHOSPHACYCLOHEXADECA[1,2,3,4-DEF]BIPHENYLEN-10-YL]METHYL DIHYDROGEN PHOSPHATE DNA linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 S C N 165 N O N 166 N C N 167 N C N 168 R C Y 169 N N Y 170 N C Y 171 N N Y 172 N C N 173 N C N 174 N O N 175 N N N 176 N C N 177 N N N 178 N N Y 179 N C N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N O N 195 N P N 196 N O N 197 N O N 198 N O N 199 N C N 200 R C N 201 N O N 202 S C N 203 N O N 204 N C N 205 R C Y 206 N N Y 207 N C Y 208 N N Y 209 N C N 210 N C N 211 N O N 212 N N N 213 N C N 214 N N N 215 N N Y 216 N C N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N O N 232 N P N 233 N O N 234 N O N 235 N O N 236 N C N 237 R C N 238 N O N 239 S C N 240 N O N 241 N C N 242 R C N 243 N N N 244 N C N 245 N O N 246 N N N 247 N C N 248 N O N 249 N C N 250 N C N 251 N C N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N P N 268 N O N 269 N O N 270 N O N 271 S P N 272 N O N 273 N O N 274 N O N 275 S P N 276 N O N 277 N O N 278 N O N 279 N O N 280 N C N 281 R C N 282 N O N 283 S C N 284 N O N 285 N C N 286 R C Y 287 N N Y 288 N C Y 289 N N Y 290 N C Y 291 N C N 292 N N Y 293 N N Y 294 N C Y 295 N N Y 296 N C N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 N C N 318 N C N 319 N C N 320 N O N 321 N N N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N N N 334 S C N 335 N C N 336 N O N 337 N C N 338 N C N 339 N C N 340 N O N 341 N O N 342 N O N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 N C N 354 N C N 355 N O N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 N C Y 367 N C Y 368 N N Y 369 N C Y 370 N C Y 371 N N N 372 N O N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N O N 384 N H N 385 N H N 386 N N N 387 S C N 388 N C N 389 N O N 390 S C N 391 N C N 392 N C N 393 N C N 394 N O N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N N N 409 S C N 410 N C N 411 N O N 412 N C N 413 N C N 414 N C N 415 N C N 416 N O N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N N N 431 S C N 432 N C N 433 N O N 434 N C N 435 N C N 436 N C N 437 N C N 438 N N N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N N N 456 S C N 457 N C N 458 N O N 459 N C N 460 N C N 461 N S N 462 N C N 463 N O N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N MN N 476 N N N 477 S C N 478 N C N 479 N O N 480 N C Y 481 N C Y 482 N C Y 483 N C Y 484 N C Y 485 N C Y 486 N C N 487 N O N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N N N 500 S C N 501 N C N 502 N O N 503 N C N 504 N C N 505 N C N 506 N O N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N N N 517 S C N 518 N C N 519 N O N 520 N C N 521 N O N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N S N 531 N O N 532 N O N 533 N O N 534 N O N 535 N N N 536 S C N 537 N C N 538 N O N 539 R C N 540 N O N 541 N C N 542 N O N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 550 N H N 551 N H N 552 N N N 553 S C N 554 N C N 555 N O N 556 N C Y 557 N C Y 558 N C Y 559 N C Y 560 N N Y 561 N C Y 562 N C Y 563 N C Y 564 N C Y 565 N C N 566 N O N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N P N 580 N O N 581 N O N 582 N O N 583 N O N 584 N C N 585 R C N 586 N O N 587 S C N 588 N O N 589 N C N 590 R C N 591 N N N 592 N C N 593 N O N 594 N N N 595 N C N 596 N O N 597 R C N 598 N C N 599 R C N 600 S P N 601 N O N 602 N O N 603 N O N 604 N C N 605 N O N 606 N C N 607 R C N 608 N N N 609 N C N 610 N O N 611 N N N 612 N C N 613 N O N 614 S C N 615 N C N 616 S C N 617 R C N 618 S C N 619 N O N 620 N H N 621 N H N 622 N H N 623 N H N 624 N H N 625 N H N 626 N H N 627 N H N 628 N H N 629 N H N 630 N H N 631 N H N 632 N H N 633 N H N 634 N H N 635 N H N 636 N H N 637 N H N 638 N H N 639 N H N 640 N H N 641 N H N 642 N H N 643 N H N 644 N H N 645 N H N 646 N H N 647 N H N 648 N N N 649 S C N 650 N C N 651 N O N 652 N C Y 653 N C Y 654 N C Y 655 N C Y 656 N C Y 657 N C Y 658 N C N 659 N O N 660 N O N 661 N H N 662 N H N 663 N H N 664 N H N 665 N H N 666 N H N 667 N H N 668 N H N 669 N H N 670 N H N 671 N H N 672 N N N 673 S C N 674 N C N 675 N O N 676 N C N 677 N C N 678 N C N 679 N O N 680 N H N 681 N H N 682 N H N 683 N H N 684 N H N 685 N H N 686 N H N 687 N H N 688 N H N 689 N H N 690 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing Y 178 N sing Y 179 N sing Y 180 N doub N 181 N sing Y 182 N sing N 183 N sing Y 184 N doub N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing Y 217 N sing Y 218 N sing Y 219 N doub N 220 N sing Y 221 N sing N 222 N sing Y 223 N doub N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing Y 303 N sing Y 304 N sing Y 305 N doub N 306 N sing Y 307 N sing Y 308 N sing Y 309 N doub N 310 N sing Y 311 N doub N 312 N sing N 313 N sing Y 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N doub N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N sing N 373 N sing N 374 N sing Y 375 N sing Y 376 N doub Y 377 N doub N 378 N sing Y 379 N sing N 380 N sing Y 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N doub N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N doub N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N doub N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N doub N 479 N sing N 480 N sing N 481 N sing N 482 N sing Y 483 N doub Y 484 N sing Y 485 N sing N 486 N sing Y 487 N doub N 488 N sing Y 489 N doub N 490 N sing Y 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N doub N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N doub N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N doub N 526 N doub N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N doub N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N doub N 552 N sing N 553 N sing N 554 N sing N 555 N sing Y 556 N doub Y 557 N sing Y 558 N sing N 559 N sing Y 560 N doub Y 561 N sing Y 562 N sing N 563 N sing Y 564 N sing Y 565 N doub N 566 N sing Y 567 N doub N 568 N sing Y 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N doub N 574 N sing N 575 N sing N 576 N sing N 577 N sing N 578 N sing N 579 N sing N 580 N sing N 581 N sing N 582 N sing N 583 N sing N 584 N sing N 585 N sing N 586 N sing N 587 N sing N 588 N sing N 589 N sing N 590 N sing N 591 N sing N 592 N sing N 593 N sing N 594 N sing N 595 N sing N 596 N sing N 597 N sing N 598 N doub N 599 N sing N 600 N sing N 601 N sing N 602 N doub N 603 N sing N 604 N sing N 605 N sing N 606 N sing N 607 N sing N 608 N sing N 609 N sing N 610 N sing N 611 N sing N 612 N doub N 613 N sing N 614 N sing N 615 N sing N 616 N sing N 617 N sing N 618 N sing N 619 N sing N 620 N sing N 621 N sing N 622 N sing N 623 N sing N 624 N sing N 625 N sing N 626 N sing N 627 N sing N 628 N sing N 629 N sing N 630 N doub N 631 N sing N 632 N sing N 633 N sing N 634 N doub N 635 N sing N 636 N sing N 637 N sing N 638 N sing N 639 N sing N 640 N sing N 641 N sing N 642 N sing N 643 N sing N 644 N sing N 645 N sing N 646 N sing N 647 N sing N 648 N sing N 649 N sing N 650 N sing N 651 N sing N 652 N sing N 653 N doub N 654 N sing N 655 N sing N 656 N sing N 657 N sing Y 658 N doub Y 659 N sing Y 660 N sing N 661 N sing Y 662 N doub N 663 N sing Y 664 N doub N 665 N sing Y 666 N sing N 667 N sing N 668 N sing N 669 N sing N 670 N sing N 671 N sing N 672 N sing N 673 N sing N 674 N sing N 675 N sing N 676 N sing N 677 N doub N 678 N sing N 679 N sing N 680 N sing N 681 N sing N 682 N sing N 683 N sing N 684 N sing N 685 N sing N 686 N sing N 687 N sing N 688 N sing US Biochemistry BICHAW 0033 0006-2960 10.1021/acs.biochem.5c00781 Structural basis for blockage of DNA synthesis by a thymine dimer lesion in a high-fidelity DNA polymerase 2026 0000-0002-5189-7036 10.2210/pdb9yd2/pdb pdb_00009yd2 100 1 N CCD 2015-03-26 MARMOSAIC 225 mm CCD SINGLE WAVELENGTH M x-ray 1 1.000 1.0 22-BM APS 1.000 SYNCHROTRON APS BEAMLINE 22-BM 66260.039 DNA polymerase I 2.7.7.7 D598A 1 man polymer 3391.250 DNA (5'-D(*CP*AP*AP*GP*GP*AP*CP*AP*GP*TP*(DDG))-3') 1 syn polymer 4824.142 DNA (5'-D(*AP*(TTD)P*CP*AP*CP*TP*GP*TP*CP*CP*TP*TP*G)-3') 1 syn polymer 491.182 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE 1 syn non-polymer 54.938 MANGANESE (II) ION 1 syn non-polymer 96.063 SULFATE ION 3 syn non-polymer 18.015 water 98 nat water no no MAKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKR AAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIW ELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLG VILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPATKKVHTIFNQALTQTGR LSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSED EVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPD ITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQA VTLRVPLKVDYHYGSTWYDAK MAKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKR AAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIW ELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLG VILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPATKKVHTIFNQALTQTGR LSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSED EVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPD ITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQA VTLRVPLKVDYHYGSTWYDAK A polypeptide(L) no yes (DC)(DA)(DA)(DG)(DG)(DA)(DC)(DA)(DG)(DT)(DDG) CAAGGACAGTG B polydeoxyribonucleotide no yes (DA)(TTD)(DC)(DA)(DC)(DT)(DG)(DT)(DC)(DC)(DT)(DT)(DG)(DA)(DC) ATCACTGTCCTTGAC C polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 581 DPO1, polA 1422 Geobacillus stearothermophilus 562 Escherichia coli Biological sequence 1 3.14 60.59 VAPOR DIFFUSION, HANGING DROP 46% (v/v) saturated ammonium sulfate, 10 mM manganese sulfate (MnSO4), 100 mM 2-(N-morpholino)ethanesulfonic acid (MES), 5% 2-methyl-1,3-propanediol (MPD), 1 mM 2',3'-dideoxyguanosine triphosphate, 5 mM 2'-deoxyadenosine triphosphate 290 -4.983 B 19 C 14 10.769 B_DC19:DG14_C 1 -0.692 3.492 -0.348 -0.745 -6.088 1 20 B 20 C 13 7.556 B_DA20:DT13_C 2 -7.684 -0.880 0.310 -0.068 -2.309 1 20 B 21 C 12 -2.342 B_DA21:DT12_C 3 -7.722 -0.088 0.262 0.082 -0.682 1 19 B 22 C 11 -5.916 B_DG22:DC11_C 4 -7.919 0.139 -0.038 -0.299 -6.717 1 19 B 23 C 10 11.638 B_DG23:DC10_C 5 -10.771 0.262 -0.280 0.080 -3.484 1 20 B 24 C 9 -8.574 B_DA24:DT9_C 6 -15.118 -0.047 -0.537 -0.432 8.755 1 19 B 25 C 8 -3.648 B_DC25:DG8_C 7 -4.736 0.044 -0.519 -0.231 4.779 1 20 B 26 C 7 -0.346 B_DA26:DT7_C 8 -3.460 0.345 -0.036 0.138 13.124 1 19 B 27 C 6 -1.634 B_DG27:DC6_C 9 -12.127 -0.151 0.781 -0.086 10.559 1 20 B 28 C 5 2.898 B_DT28:DA5_C 10 -10.454 0.268 0.376 -0.179 8.911 1 19 B 29 C 4 2.050 B_DDG29:DC4_C 11 -5.902 -0.188 -0.141 -0.083 3.648 21.221 B B 19 20 11.974 C C 14 13 3.629 4.029 -1.347 0.440 BB_DC19DA20:DT13DG14_CC 1 -13.668 40.615 15.767 -0.943 -3.590 3.271 37.216 B B 20 21 -0.481 C C 13 12 3.187 -0.307 -1.183 -0.219 BB_DA20DA21:DT12DT13_CC 2 -2.972 4.662 37.100 -0.302 1.463 3.362 35.448 B B 21 22 -1.402 C C 12 11 3.339 -0.854 -0.789 -0.078 BB_DA21DG22:DC11DT12_CC 3 -1.100 1.806 35.421 0.001 1.131 3.338 34.819 B B 22 23 12.351 C C 11 10 3.473 7.339 0.371 -0.326 BB_DG22DG23:DC10DC11_CC 4 0.520 -0.876 34.057 -1.720 -0.536 3.227 30.428 B B 23 24 2.485 C C 10 9 3.261 1.304 -1.460 -0.073 BB_DG23DA24:DT9DC10_CC 5 0.585 -1.115 30.395 -0.399 2.897 2.855 30.185 B B 24 25 7.294 C C 9 8 2.903 3.789 1.212 -0.405 BB_DA24DC25:DG8DT9_CC 6 0.632 -1.218 29.946 -1.458 -2.214 3.385 30.899 B B 25 26 18.699 C C 8 7 3.571 9.793 0.668 -0.134 BB_DC25DA26:DT7DG8_CC 7 1.756 -3.353 29.290 -2.328 -0.882 2.857 40.970 B B 26 27 9.670 C C 7 6 3.126 6.667 0.053 -0.732 BB_DA26DG27:DC6DT7_CC 8 -10.756 15.602 39.047 -1.729 -1.179 2.758 29.762 B B 27 28 19.586 C C 6 5 3.603 9.842 -0.300 -1.752 BB_DG27DT28:DA5DC6_CC 9 4.360 -8.677 27.788 -5.486 1.504 2.918 30.793 B B 28 29 14.796 C C 5 4 3.355 7.768 0.118 -1.347 BB_DT28DDG29:DC4DA5_CC 10 2.341 -4.459 29.730 -4.018 0.224 repository Initial release 1 0 2026-06-24 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01 GM091487 United States National Institutes of Health/National Cancer Institute (NIH/NCI) P01 CA092584 ewu@richmond.edu 0000-0002-5189-7036 Eugene Wu Y principal investigator/group leader lorena.beese@duke.edu 0000-0003-4925-4733 Lorena Beese S. principal investigator/group leader N RCSB Y RCSB 2025-09-20 REL REL DTP DTP SUBJECT OF INVESTIGATION TTD TTD SUBJECT OF INVESTIGATION DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE MN MANGANESE (II) ION SO4 SULFATE ION HOH water 32630 synthetic construct sample 1 11 32630 synthetic construct sample 1 15 Y N 3HPO PDB experimental model DTP 901 4 DTP DTP 901 A MN 911 5 MN MN 902 A SO4 912 6 SO4 SO4 903 A SO4 913 6 SO4 SO4 904 A SO4 914 6 SO4 SO4 905 A HOH 169 7 HOH HOH 1001 A HOH 172 7 HOH HOH 1002 A HOH 110 7 HOH HOH 1003 A HOH 151 7 HOH HOH 1004 A HOH 101 7 HOH HOH 1005 A HOH 103 7 HOH HOH 1006 A HOH 193 7 HOH HOH 1007 A HOH 104 7 HOH HOH 1008 A HOH 195 7 HOH HOH 1009 A HOH 168 7 HOH HOH 1010 A HOH 165 7 HOH HOH 1011 A HOH 116 7 HOH HOH 1012 A HOH 107 7 HOH HOH 1013 A HOH 112 7 HOH HOH 1014 A HOH 160 7 HOH HOH 1015 A HOH 199 7 HOH HOH 1016 A HOH 171 7 HOH HOH 1017 A HOH 105 7 HOH HOH 1018 A HOH 119 7 HOH HOH 1019 A HOH 156 7 HOH HOH 1020 A HOH 152 7 HOH HOH 1021 A HOH 150 7 HOH HOH 1022 A HOH 148 7 HOH HOH 1023 A HOH 164 7 HOH HOH 1024 A HOH 111 7 HOH HOH 1025 A HOH 182 7 HOH HOH 1026 A HOH 167 7 HOH HOH 1027 A HOH 191 7 HOH HOH 1028 A HOH 154 7 HOH HOH 1029 A HOH 114 7 HOH HOH 1030 A HOH 118 7 HOH HOH 1031 A HOH 113 7 HOH HOH 1032 A HOH 174 7 HOH HOH 1033 A HOH 115 7 HOH HOH 1034 A HOH 188 7 HOH HOH 1035 A HOH 183 7 HOH HOH 1036 A HOH 117 7 HOH HOH 1037 A HOH 173 7 HOH HOH 1038 A HOH 176 7 HOH HOH 1039 A HOH 145 7 HOH HOH 1040 A HOH 106 7 HOH HOH 1041 A HOH 109 7 HOH HOH 1042 A HOH 102 7 HOH HOH 1043 A HOH 149 7 HOH HOH 1044 A HOH 187 7 HOH HOH 1045 A HOH 166 7 HOH HOH 1046 A HOH 189 7 HOH HOH 1047 A HOH 126 7 HOH HOH 1048 A HOH 131 7 HOH HOH 1049 A HOH 121 7 HOH HOH 1050 A HOH 130 7 HOH HOH 1051 A HOH 127 7 HOH HOH 1052 A HOH 157 7 HOH HOH 1053 A HOH 120 7 HOH HOH 1054 A HOH 186 7 HOH HOH 1055 A HOH 122 7 HOH HOH 1056 A HOH 146 7 HOH HOH 1057 A HOH 108 7 HOH HOH 1058 A HOH 128 7 HOH HOH 1059 A HOH 137 7 HOH HOH 1060 A HOH 124 7 HOH HOH 1061 A HOH 129 7 HOH HOH 1062 A HOH 153 7 HOH HOH 1063 A HOH 158 7 HOH HOH 1064 A HOH 123 7 HOH HOH 1065 A HOH 175 7 HOH HOH 1066 A HOH 159 7 HOH HOH 1067 A HOH 134 7 HOH HOH 1068 A HOH 135 7 HOH HOH 1069 A HOH 136 7 HOH HOH 1070 A HOH 155 7 HOH HOH 1071 A HOH 197 7 HOH HOH 1072 A HOH 163 7 HOH HOH 1073 A HOH 192 7 HOH HOH 1074 A HOH 132 7 HOH HOH 1075 A HOH 194 7 HOH HOH 1076 A HOH 179 7 HOH HOH 1077 A HOH 177 7 HOH HOH 1078 A HOH 161 7 HOH HOH 1079 A HOH 180 7 HOH HOH 1080 A HOH 162 7 HOH HOH 1081 A HOH 200 7 HOH HOH 1082 A HOH 141 7 HOH HOH 1083 A HOH 147 7 HOH HOH 1084 A HOH 138 7 HOH HOH 1085 A HOH 142 7 HOH HOH 1086 A HOH 170 7 HOH HOH 1087 A HOH 140 7 HOH HOH 1088 A HOH 139 7 HOH HOH 1089 A HOH 143 7 HOH HOH 1090 A HOH 198 7 HOH HOH 1091 A HOH 181 7 HOH HOH 1092 A HOH 144 7 HOH HOH 1093 A HOH 133 7 HOH HOH 1094 A HOH 184 7 HOH HOH 101 B HOH 196 7 HOH HOH 101 C HOH 185 7 HOH HOH 102 C HOH 190 7 HOH HOH 103 C n 1 296 A ALA 297 n 2 ALA 297 A LYS 298 n 3 LYS 298 A MET 299 n 4 MET 299 A ALA 300 n 5 ALA 300 A PHE 301 n 6 PHE 301 A THR 302 n 7 THR 302 A LEU 303 n 8 LEU 303 A ALA 304 n 9 ALA 304 A ASP 305 n 10 ASP 305 A ARG 306 n 11 ARG 306 A VAL 307 n 12 VAL 307 A THR 308 n 13 THR 308 A GLU 309 n 14 GLU 309 A GLU 310 n 15 GLU 310 A MET 311 n 16 MET 311 A LEU 312 n 17 LEU 312 A ALA 313 n 18 ALA 313 A ASP 314 n 19 ASP 314 A LYS 315 n 20 LYS 315 A ALA 316 n 21 ALA 316 A ALA 317 n 22 ALA 317 A LEU 318 n 23 LEU 318 A VAL 319 n 24 VAL 319 A VAL 320 n 25 VAL 320 A GLU 321 n 26 GLU 321 A VAL 322 n 27 VAL 322 A VAL 323 n 28 VAL 323 A GLU 324 n 29 GLU 324 A GLU 325 n 30 GLU 325 A ASN 326 n 31 ASN 326 A TYR 327 n 32 TYR 327 A HIS 328 n 33 HIS 328 A ASP 329 n 34 ASP 329 A ALA 330 n 35 ALA 330 A PRO 331 n 36 PRO 331 A ILE 332 n 37 ILE 332 A VAL 333 n 38 VAL 333 A GLY 334 n 39 GLY 334 A ILE 335 n 40 ILE 335 A ALA 336 n 41 ALA 336 A VAL 337 n 42 VAL 337 A VAL 338 n 43 VAL 338 A ASN 339 n 44 ASN 339 A GLU 340 n 45 GLU 340 A HIS 341 n 46 HIS 341 A GLY 342 n 47 GLY 342 A ARG 343 n 48 ARG 343 A PHE 344 n 49 PHE 344 A PHE 345 n 50 PHE 345 A LEU 346 n 51 LEU 346 A ARG 347 n 52 ARG 347 A PRO 348 n 53 PRO 348 A GLU 349 n 54 GLU 349 A THR 350 n 55 THR 350 A ALA 351 n 56 ALA 351 A LEU 352 n 57 LEU 352 A ALA 353 n 58 ALA 353 A ASP 354 n 59 ASP 354 A PRO 355 n 60 PRO 355 A GLN 356 n 61 GLN 356 A PHE 357 n 62 PHE 357 A VAL 358 n 63 VAL 358 A ALA 359 n 64 ALA 359 A TRP 360 n 65 TRP 360 A LEU 361 n 66 LEU 361 A GLY 362 n 67 GLY 362 A ASP 363 n 68 ASP 363 A GLU 364 n 69 GLU 364 A THR 365 n 70 THR 365 A LYS 366 n 71 LYS 366 A LYS 367 n 72 LYS 367 A LYS 368 n 73 LYS 368 A SER 369 n 74 SER 369 A MET 370 n 75 MET 370 A PHE 371 n 76 PHE 371 A ASP 372 n 77 ASP 372 A SER 373 n 78 SER 373 A LYS 374 n 79 LYS 374 A ARG 375 n 80 ARG 375 A ALA 376 n 81 ALA 376 A ALA 377 n 82 ALA 377 A VAL 378 n 83 VAL 378 A ALA 379 n 84 ALA 379 A LEU 380 n 85 LEU 380 A LYS 381 n 86 LYS 381 A TRP 382 n 87 TRP 382 A LYS 383 n 88 LYS 383 A GLY 384 n 89 GLY 384 A ILE 385 n 90 ILE 385 A GLU 386 n 91 GLU 386 A LEU 387 n 92 LEU 387 A CYS 388 n 93 CYS 388 A GLY 389 n 94 GLY 389 A VAL 390 n 95 VAL 390 A SER 391 n 96 SER 391 A PHE 392 n 97 PHE 392 A ASP 393 n 98 ASP 393 A LEU 394 n 99 LEU 394 A LEU 395 n 100 LEU 395 A LEU 396 n 101 LEU 396 A ALA 397 n 102 ALA 397 A ALA 398 n 103 ALA 398 A TYR 399 n 104 TYR 399 A LEU 400 n 105 LEU 400 A LEU 401 n 106 LEU 401 A ASP 402 n 107 ASP 402 A PRO 403 n 108 PRO 403 A ALA 404 n 109 ALA 404 A GLN 405 n 110 GLN 405 A GLY 406 n 111 GLY 406 A VAL 407 n 112 VAL 407 A ASP 408 n 113 ASP 408 A ASP 409 n 114 ASP 409 A VAL 410 n 115 VAL 410 A ALA 411 n 116 ALA 411 A ALA 412 n 117 ALA 412 A ALA 413 n 118 ALA 413 A ALA 414 n 119 ALA 414 A LYS 415 n 120 LYS 415 A MET 416 n 121 MET 416 A LYS 417 n 122 LYS 417 A GLN 418 n 123 GLN 418 A TYR 419 n 124 TYR 419 A GLU 420 n 125 GLU 420 A ALA 421 n 126 ALA 421 A VAL 422 n 127 VAL 422 A ARG 423 n 128 ARG 423 A PRO 424 n 129 PRO 424 A ASP 425 n 130 ASP 425 A GLU 426 n 131 GLU 426 A ALA 427 n 132 ALA 427 A VAL 428 n 133 VAL 428 A TYR 429 n 134 TYR 429 A GLY 430 n 135 GLY 430 A LYS 431 n 136 LYS 431 A GLY 432 n 137 GLY 432 A ALA 433 n 138 ALA 433 A LYS 434 n 139 LYS 434 A ARG 435 n 140 ARG 435 A ALA 436 n 141 ALA 436 A VAL 437 n 142 VAL 437 A PRO 438 n 143 PRO 438 A ASP 439 n 144 ASP 439 A GLU 440 n 145 GLU 440 A PRO 441 n 146 PRO 441 A VAL 442 n 147 VAL 442 A LEU 443 n 148 LEU 443 A ALA 444 n 149 ALA 444 A GLU 445 n 150 GLU 445 A HIS 446 n 151 HIS 446 A LEU 447 n 152 LEU 447 A VAL 448 n 153 VAL 448 A ARG 449 n 154 ARG 449 A LYS 450 n 155 LYS 450 A ALA 451 n 156 ALA 451 A ALA 452 n 157 ALA 452 A ALA 453 n 158 ALA 453 A ILE 454 n 159 ILE 454 A TRP 455 n 160 TRP 455 A GLU 456 n 161 GLU 456 A LEU 457 n 162 LEU 457 A GLU 458 n 163 GLU 458 A ARG 459 n 164 ARG 459 A PRO 460 n 165 PRO 460 A PHE 461 n 166 PHE 461 A LEU 462 n 167 LEU 462 A ASP 463 n 168 ASP 463 A GLU 464 n 169 GLU 464 A LEU 465 n 170 LEU 465 A ARG 466 n 171 ARG 466 A ARG 467 n 172 ARG 467 A ASN 468 n 173 ASN 468 A GLU 469 n 174 GLU 469 A GLN 470 n 175 GLN 470 A ASP 471 n 176 ASP 471 A ARG 472 n 177 ARG 472 A LEU 473 n 178 LEU 473 A LEU 474 n 179 LEU 474 A VAL 475 n 180 VAL 475 A GLU 476 n 181 GLU 476 A LEU 477 n 182 LEU 477 A GLU 478 n 183 GLU 478 A GLN 479 n 184 GLN 479 A PRO 480 n 185 PRO 480 A LEU 481 n 186 LEU 481 A SER 482 n 187 SER 482 A SER 483 n 188 SER 483 A ILE 484 n 189 ILE 484 A LEU 485 n 190 LEU 485 A ALA 486 n 191 ALA 486 A GLU 487 n 192 GLU 487 A MET 488 n 193 MET 488 A GLU 489 n 194 GLU 489 A PHE 490 n 195 PHE 490 A ALA 491 n 196 ALA 491 A GLY 492 n 197 GLY 492 A VAL 493 n 198 VAL 493 A LYS 494 n 199 LYS 494 A VAL 495 n 200 VAL 495 A ASP 496 n 201 ASP 496 A THR 497 n 202 THR 497 A LYS 498 n 203 LYS 498 A ARG 499 n 204 ARG 499 A LEU 500 n 205 LEU 500 A GLU 501 n 206 GLU 501 A GLN 502 n 207 GLN 502 A MET 503 n 208 MET 503 A GLY 504 n 209 GLY 504 A LYS 505 n 210 LYS 505 A GLU 506 n 211 GLU 506 A LEU 507 n 212 LEU 507 A ALA 508 n 213 ALA 508 A GLU 509 n 214 GLU 509 A GLN 510 n 215 GLN 510 A LEU 511 n 216 LEU 511 A GLY 512 n 217 GLY 512 A THR 513 n 218 THR 513 A VAL 514 n 219 VAL 514 A GLU 515 n 220 GLU 515 A GLN 516 n 221 GLN 516 A ARG 517 n 222 ARG 517 A ILE 518 n 223 ILE 518 A TYR 519 n 224 TYR 519 A GLU 520 n 225 GLU 520 A LEU 521 n 226 LEU 521 A ALA 522 n 227 ALA 522 A GLY 523 n 228 GLY 523 A GLN 524 n 229 GLN 524 A GLU 525 n 230 GLU 525 A PHE 526 n 231 PHE 526 A ASN 527 n 232 ASN 527 A ILE 528 n 233 ILE 528 A ASN 529 n 234 ASN 529 A SER 530 n 235 SER 530 A PRO 531 n 236 PRO 531 A LYS 532 n 237 LYS 532 A GLN 533 n 238 GLN 533 A LEU 534 n 239 LEU 534 A GLY 535 n 240 GLY 535 A VAL 536 n 241 VAL 536 A ILE 537 n 242 ILE 537 A LEU 538 n 243 LEU 538 A PHE 539 n 244 PHE 539 A GLU 540 n 245 GLU 540 A LYS 541 n 246 LYS 541 A LEU 542 n 247 LEU 542 A GLN 543 n 248 GLN 543 A LEU 544 n 249 LEU 544 A PRO 545 n 250 PRO 545 A VAL 546 n 251 VAL 546 A LEU 547 n 252 LEU 547 A LYS 548 n 253 LYS 548 A LYS 549 n 254 LYS 549 A THR 550 n 255 THR 550 A LYS 551 n 256 LYS 551 A THR 552 n 257 THR 552 A GLY 553 n 258 GLY 553 A TYR 554 n 259 TYR 554 A SER 555 n 260 SER 555 A THR 556 n 261 THR 556 A SER 557 n 262 SER 557 A ALA 558 n 263 ALA 558 A ASP 559 n 264 ASP 559 A VAL 560 n 265 VAL 560 A LEU 561 n 266 LEU 561 A GLU 562 n 267 GLU 562 A LYS 563 n 268 LYS 563 A LEU 564 n 269 LEU 564 A ALA 565 n 270 ALA 565 A PRO 566 n 271 PRO 566 A TYR 567 n 272 TYR 567 A HIS 568 n 273 HIS 568 A GLU 569 n 274 GLU 569 A ILE 570 n 275 ILE 570 A VAL 571 n 276 VAL 571 A GLU 572 n 277 GLU 572 A ASN 573 n 278 ASN 573 A ILE 574 n 279 ILE 574 A LEU 575 n 280 LEU 575 A HIS 576 n 281 HIS 576 A TYR 577 n 282 TYR 577 A ARG 578 n 283 ARG 578 A GLN 579 n 284 GLN 579 A LEU 580 n 285 LEU 580 A GLY 581 n 286 GLY 581 A LYS 582 n 287 LYS 582 A LEU 583 n 288 LEU 583 A GLN 584 n 289 GLN 584 A SER 585 n 290 SER 585 A THR 586 n 291 THR 586 A TYR 587 n 292 TYR 587 A ILE 588 n 293 ILE 588 A GLU 589 n 294 GLU 589 A GLY 590 n 295 GLY 590 A LEU 591 n 296 LEU 591 A LEU 592 n 297 LEU 592 A LYS 593 n 298 LYS 593 A VAL 594 n 299 VAL 594 A VAL 595 n 300 VAL 595 A ARG 596 n 301 ARG 596 A PRO 597 n 302 PRO 597 A ALA 598 n 303 ALA 598 A THR 599 n 304 THR 599 A LYS 600 n 305 LYS 600 A LYS 601 n 306 LYS 601 A VAL 602 n 307 VAL 602 A HIS 603 n 308 HIS 603 A THR 604 n 309 THR 604 A ILE 605 n 310 ILE 605 A PHE 606 n 311 PHE 606 A ASN 607 n 312 ASN 607 A GLN 608 n 313 GLN 608 A ALA 609 n 314 ALA 609 A LEU 610 n 315 LEU 610 A THR 611 n 316 THR 611 A GLN 612 n 317 GLN 612 A THR 613 n 318 THR 613 A GLY 614 n 319 GLY 614 A ARG 615 n 320 ARG 615 A LEU 616 n 321 LEU 616 A SER 617 n 322 SER 617 A SER 618 n 323 SER 618 A THR 619 n 324 THR 619 A GLU 620 n 325 GLU 620 A PRO 621 n 326 PRO 621 A ASN 622 n 327 ASN 622 A LEU 623 n 328 LEU 623 A GLN 624 n 329 GLN 624 A ASN 625 n 330 ASN 625 A ILE 626 n 331 ILE 626 A PRO 627 n 332 PRO 627 A ILE 628 n 333 ILE 628 A ARG 629 n 334 ARG 629 A LEU 630 n 335 LEU 630 A GLU 631 n 336 GLU 631 A GLU 632 n 337 GLU 632 A GLY 633 n 338 GLY 633 A ARG 634 n 339 ARG 634 A LYS 635 n 340 LYS 635 A ILE 636 n 341 ILE 636 A ARG 637 n 342 ARG 637 A GLN 638 n 343 GLN 638 A ALA 639 n 344 ALA 639 A PHE 640 n 345 PHE 640 A VAL 641 n 346 VAL 641 A PRO 642 n 347 PRO 642 A SER 643 n 348 SER 643 A GLU 644 n 349 GLU 644 A SER 645 n 350 SER 645 A ASP 646 n 351 ASP 646 A TRP 647 n 352 TRP 647 A LEU 648 n 353 LEU 648 A ILE 649 n 354 ILE 649 A PHE 650 n 355 PHE 650 A ALA 651 n 356 ALA 651 A ALA 652 n 357 ALA 652 A ASP 653 n 358 ASP 653 A TYR 654 n 359 TYR 654 A SER 655 n 360 SER 655 A GLN 656 n 361 GLN 656 A ILE 657 n 362 ILE 657 A GLU 658 n 363 GLU 658 A LEU 659 n 364 LEU 659 A ARG 660 n 365 ARG 660 A VAL 661 n 366 VAL 661 A LEU 662 n 367 LEU 662 A ALA 663 n 368 ALA 663 A HIS 664 n 369 HIS 664 A ILE 665 n 370 ILE 665 A ALA 666 n 371 ALA 666 A GLU 667 n 372 GLU 667 A ASP 668 n 373 ASP 668 A ASP 669 n 374 ASP 669 A ASN 670 n 375 ASN 670 A LEU 671 n 376 LEU 671 A MET 672 n 377 MET 672 A GLU 673 n 378 GLU 673 A ALA 674 n 379 ALA 674 A PHE 675 n 380 PHE 675 A ARG 676 n 381 ARG 676 A ARG 677 n 382 ARG 677 A ASP 678 n 383 ASP 678 A LEU 679 n 384 LEU 679 A ASP 680 n 385 ASP 680 A ILE 681 n 386 ILE 681 A HIS 682 n 387 HIS 682 A THR 683 n 388 THR 683 A LYS 684 n 389 LYS 684 A THR 685 n 390 THR 685 A ALA 686 n 391 ALA 686 A MET 687 n 392 MET 687 A ASP 688 n 393 ASP 688 A ILE 689 n 394 ILE 689 A PHE 690 n 395 PHE 690 A GLN 691 n 396 GLN 691 A VAL 692 n 397 VAL 692 A SER 693 n 398 SER 693 A GLU 694 n 399 GLU 694 A ASP 695 n 400 ASP 695 A GLU 696 n 401 GLU 696 A VAL 697 n 402 VAL 697 A THR 698 n 403 THR 698 A PRO 699 n 404 PRO 699 A ASN 700 n 405 ASN 700 A MET 701 n 406 MET 701 A ARG 702 n 407 ARG 702 A ARG 703 n 408 ARG 703 A GLN 704 n 409 GLN 704 A ALA 705 n 410 ALA 705 A LYS 706 n 411 LYS 706 A ALA 707 n 412 ALA 707 A VAL 708 n 413 VAL 708 A ASN 709 n 414 ASN 709 A PHE 710 n 415 PHE 710 A GLY 711 n 416 GLY 711 A ILE 712 n 417 ILE 712 A VAL 713 n 418 VAL 713 A TYR 714 n 419 TYR 714 A GLY 715 n 420 GLY 715 A ILE 716 n 421 ILE 716 A SER 717 n 422 SER 717 A ASP 718 n 423 ASP 718 A TYR 719 n 424 TYR 719 A GLY 720 n 425 GLY 720 A LEU 721 n 426 LEU 721 A ALA 722 n 427 ALA 722 A GLN 723 n 428 GLN 723 A ASN 724 n 429 ASN 724 A LEU 725 n 430 LEU 725 A ASN 726 n 431 ASN 726 A ILE 727 n 432 ILE 727 A SER 728 n 433 SER 728 A ARG 729 n 434 ARG 729 A LYS 730 n 435 LYS 730 A GLU 731 n 436 GLU 731 A ALA 732 n 437 ALA 732 A ALA 733 n 438 ALA 733 A GLU 734 n 439 GLU 734 A PHE 735 n 440 PHE 735 A ILE 736 n 441 ILE 736 A GLU 737 n 442 GLU 737 A ARG 738 n 443 ARG 738 A TYR 739 n 444 TYR 739 A PHE 740 n 445 PHE 740 A GLU 741 n 446 GLU 741 A SER 742 n 447 SER 742 A PHE 743 n 448 PHE 743 A PRO 744 n 449 PRO 744 A GLY 745 n 450 GLY 745 A VAL 746 n 451 VAL 746 A LYS 747 n 452 LYS 747 A ARG 748 n 453 ARG 748 A TYR 749 n 454 TYR 749 A MET 750 n 455 MET 750 A GLU 751 n 456 GLU 751 A ASN 752 n 457 ASN 752 A ILE 753 n 458 ILE 753 A VAL 754 n 459 VAL 754 A GLN 755 n 460 GLN 755 A GLU 756 n 461 GLU 756 A ALA 757 n 462 ALA 757 A LYS 758 n 463 LYS 758 A GLN 759 n 464 GLN 759 A LYS 760 n 465 LYS 760 A GLY 761 n 466 GLY 761 A TYR 762 n 467 TYR 762 A VAL 763 n 468 VAL 763 A THR 764 n 469 THR 764 A THR 765 n 470 THR 765 A LEU 766 n 471 LEU 766 A LEU 767 n 472 LEU 767 A HIS 768 n 473 HIS 768 A ARG 769 n 474 ARG 769 A ARG 770 n 475 ARG 770 A ARG 771 n 476 ARG 771 A TYR 772 n 477 TYR 772 A LEU 773 n 478 LEU 773 A PRO 774 n 479 PRO 774 A ASP 775 n 480 ASP 775 A ILE 776 n 481 ILE 776 A THR 777 n 482 THR 777 A SER 778 n 483 SER 778 A ARG 779 n 484 ARG 779 A ASN 780 n 485 ASN 780 A PHE 781 n 486 PHE 781 A ASN 782 n 487 ASN 782 A VAL 783 n 488 VAL 783 A ARG 784 n 489 ARG 784 A SER 785 n 490 SER 785 A PHE 786 n 491 PHE 786 A ALA 787 n 492 ALA 787 A GLU 788 n 493 GLU 788 A ARG 789 n 494 ARG 789 A MET 790 n 495 MET 790 A ALA 791 n 496 ALA 791 A MET 792 n 497 MET 792 A ASN 793 n 498 ASN 793 A THR 794 n 499 THR 794 A PRO 795 n 500 PRO 795 A ILE 796 n 501 ILE 796 A GLN 797 n 502 GLN 797 A GLY 798 n 503 GLY 798 A SER 799 n 504 SER 799 A ALA 800 n 505 ALA 800 A ALA 801 n 506 ALA 801 A ASP 802 n 507 ASP 802 A ILE 803 n 508 ILE 803 A ILE 804 n 509 ILE 804 A LYS 805 n 510 LYS 805 A LYS 806 n 511 LYS 806 A ALA 807 n 512 ALA 807 A MET 808 n 513 MET 808 A ILE 809 n 514 ILE 809 A ASP 810 n 515 ASP 810 A LEU 811 n 516 LEU 811 A ASN 812 n 517 ASN 812 A ALA 813 n 518 ALA 813 A ARG 814 n 519 ARG 814 A LEU 815 n 520 LEU 815 A LYS 816 n 521 LYS 816 A GLU 817 n 522 GLU 817 A GLU 818 n 523 GLU 818 A ARG 819 n 524 ARG 819 A LEU 820 n 525 LEU 820 A GLN 821 n 526 GLN 821 A ALA 822 n 527 ALA 822 A HIS 823 n 528 HIS 823 A LEU 824 n 529 LEU 824 A LEU 825 n 530 LEU 825 A LEU 826 n 531 LEU 826 A GLN 827 n 532 GLN 827 A VAL 828 n 533 VAL 828 A HIS 829 n 534 HIS 829 A ASP 830 n 535 ASP 830 A GLU 831 n 536 GLU 831 A LEU 832 n 537 LEU 832 A ILE 833 n 538 ILE 833 A LEU 834 n 539 LEU 834 A GLU 835 n 540 GLU 835 A ALA 836 n 541 ALA 836 A PRO 837 n 542 PRO 837 A LYS 838 n 543 LYS 838 A GLU 839 n 544 GLU 839 A GLU 840 n 545 GLU 840 A MET 841 n 546 MET 841 A GLU 842 n 547 GLU 842 A ARG 843 n 548 ARG 843 A LEU 844 n 549 LEU 844 A CYS 845 n 550 CYS 845 A ARG 846 n 551 ARG 846 A LEU 847 n 552 LEU 847 A VAL 848 n 553 VAL 848 A PRO 849 n 554 PRO 849 A GLU 850 n 555 GLU 850 A VAL 851 n 556 VAL 851 A MET 852 n 557 MET 852 A GLU 853 n 558 GLU 853 A GLN 854 n 559 GLN 854 A ALA 855 n 560 ALA 855 A VAL 856 n 561 VAL 856 A THR 857 n 562 THR 857 A LEU 858 n 563 LEU 858 A ARG 859 n 564 ARG 859 A VAL 860 n 565 VAL 860 A PRO 861 n 566 PRO 861 A LEU 862 n 567 LEU 862 A LYS 863 n 568 LYS 863 A VAL 864 n 569 VAL 864 A ASP 865 n 570 ASP 865 A TYR 866 n 571 TYR 866 A HIS 867 n 572 HIS 867 A TYR 868 n 573 TYR 868 A GLY 869 n 574 GLY 869 A SER 870 n 575 SER 870 A THR 871 n 576 THR 871 A TRP 872 n 577 TRP 872 A TYR 873 n 578 TYR 873 A ASP 874 n 579 ASP 874 A ALA 875 n 580 ALA 875 A LYS 876 n 581 LYS 876 A DC 19 n 1 DC 19 B DA 20 n 2 DA 20 B DA 21 n 3 DA 21 B DG 22 n 4 DG 22 B DG 23 n 5 DG 23 B DA 24 n 6 DA 24 B DC 25 n 7 DC 25 B DA 26 n 8 DA 26 B DG 27 n 9 DG 27 B DT 28 n 10 DT 28 B DDG 29 n 11 DDG 29 B DA 2 n 1 DA 2 C TTD 3 n 2 TTD 3 C DC 4 n 3 DC 4 C DA 5 n 4 DA 5 C DC 6 n 5 DC 6 C DT 7 n 6 DT 7 C DG 8 n 7 DG 8 C DT 9 n 8 DT 9 C DC 10 n 9 DC 10 C DC 11 n 10 DC 11 C DT 12 n 11 DT 12 C DT 13 n 12 DT 13 C DG 14 n 13 DG 14 C n 14 15 C n 15 16 C author_and_software_defined_assembly PISA 3 trimeric none 7360 -59 28300 A DTP 901 D O3G DTP 1_555 A MN 902 E MN MN 1_555 A DTP 901 D O1B DTP 1_555 85.2 A DTP 901 D O3G DTP 1_555 A MN 902 E MN MN 1_555 A DTP 901 D O1A DTP 1_555 92.3 A DTP 901 D O1B DTP 1_555 A MN 902 E MN MN 1_555 A DTP 901 D O1A DTP 1_555 72.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 302 A N THR 7 A O ARG 343 A O ARG 48 A O LEU 346 A O LEU 51 A N ILE 335 A N ILE 40 A O ALA 336 A O ALA 41 A N VAL 319 A N VAL 24 A N ALA 316 A N ALA 21 A O SER 369 A O SER 74 A N MET 370 A N MET 75 A O PHE 392 A O PHE 97 A O VAL 602 A O VAL 307 A N VAL 493 A N VAL 198 A N LYS 494 A N LYS 199 A O VAL 641 A O VAL 346 A N ASN 607 A N ASN 312 A O SER 617 A O SER 322 A N LEU 825 A N LEU 530 A O ILE 833 A O ILE 538 A O LEU 834 A O LEU 539 A N PHE 650 A N PHE 355 A N ILE 649 A N ILE 354 A O GLY 869 A O GLY 574 A N VAL 763 A N VAL 468 A O ARG 771 A O ARG 476 1 A MET 296 A MET 1 1 Y 1 C DA 15 C DA 14 1 Y 1 C DC 16 C DC 15 1 Y 1 A A OG OE2 SER GLU 643 835 2.14 1 A A OH O TYR HOH 419 1001 2.17 1 A ARG 306 0.081 SIDE CHAIN 1 A ARG 435 0.085 SIDE CHAIN 1 A ARG 789 0.141 SIDE CHAIN 1 10.13 1.60 100.20 110.33 A A A CG SD CE MET MET MET 488 488 488 N 1 -13.32 2.00 110.40 97.08 A A A CB CA C GLU GLU GLU 644 644 644 N 1 9.66 1.60 100.20 109.86 A A A CG SD CE MET MET MET 672 672 672 N 1 -3.30 0.50 120.30 117.00 A A A NE CZ NH1 ARG ARG ARG 677 677 677 N 1 -13.25 2.00 110.40 97.15 A A A CB CA C LYS LYS LYS 706 706 706 N 1 9.83 1.60 100.20 110.03 A A A CG SD CE MET MET MET 808 808 808 N 1 2.82 0.30 108.30 111.12 B B B O4' C1' N1 DC DC DC 25 25 25 N 1 2.99 0.30 108.30 111.29 B B B O4' C1' N9 DA DA DA 26 26 26 N 1 -6.01 0.90 105.70 99.69 B B B O5' P OP2 DG DG DG 27 27 27 N 1 19.04 1.90 104.00 123.04 B B B O3' P O5' DT DDG DDG 28 29 29 Y 1 -6.67 1.00 110.10 103.43 C C C C1' O4' C4' DA DA DA 2 2 2 N 1 5.58 0.30 108.30 113.88 C C C O4' C1' N9 DA DA DA 2 2 2 N 1 22.40 1.20 119.70 142.10 C C C C3' O3' P DA DA TTD 2 2 3 Y 1 -14.89 2.20 105.20 90.31 C C C O3' P OP2 DA TTD TTD 2 3 3 Y 1 16.58 1.10 110.50 127.08 C C C O3' P OP1 DA TTD TTD 2 3 3 Y 1 -11.52 1.20 119.70 108.18 C C C C3' O3' P TTD TTD DC 3 3 4 Y 1 -14.51 1.90 104.00 89.49 C C C O3' P O5' TTD DC DC 3 4 4 Y 1 32.27 1.10 110.50 142.77 C C C O3' P OP1 TTD DC DC 3 4 4 Y 1 -11.23 1.50 119.60 108.37 C C C OP1 P OP2 DC DC DC 4 4 4 N 1 3.12 0.50 106.80 109.92 C C C O4' C1' C2' DC DC DC 4 4 4 N 1 -6.98 0.90 105.70 98.72 C C C O5' P OP2 DC DC DC 6 6 6 N 1 -6.47 0.80 109.40 102.93 C C C O5' C5' C4' DC DC DC 6 6 6 N 1 3.33 0.30 108.30 111.63 C C C O4' C1' N1 DC DC DC 6 6 6 N 1 11.45 1.90 104.00 115.45 C C C O3' P O5' DC DT DT 6 7 7 Y 1 -12.02 1.90 104.00 91.98 C C C O3' P O5' DT DC DC 9 10 10 Y 1 9.34 1.20 110.70 120.04 C C C O5' P OP2 DC DC DC 10 10 10 N 1 A LEU 303 -69.41 77.40 1 A THR 350 -93.93 -62.14 1 A ASP 372 60.52 61.11 1 A ASP 402 -160.00 96.59 1 A GLN 418 76.32 32.91 1 A ALA 421 -79.78 38.79 1 A LEU 477 -125.44 -65.33 1 A GLU 520 -48.72 -71.63 1 A GLN 524 176.64 168.88 1 A VAL 536 -59.94 -70.78 1 A THR 550 -105.60 -130.60 1 A TYR 587 -94.98 -63.19 1 A LEU 610 -127.76 -58.38 1 A GLU 620 44.42 70.90 1 A ILE 628 -142.65 -26.02 1 A ASP 646 82.04 18.15 1 A ILE 689 -115.19 -70.24 1 A PHE 690 -78.29 21.65 1 A GLN 691 19.40 80.23 1 A TYR 719 -55.14 -77.14 1 A ASN 726 82.39 18.22 1 A PHE 743 -118.03 69.00 1 A HIS 829 71.58 -54.04 57.896 0.001 0.001 0.000 0.001 -0.000 -0.004 0.944 0.916 Hydrogens have been added in their riding positions 0.2853 0.2247 0.228 2.249 79.796 2372 42391 44763 5.299 99.229 9.217 0.215 1 FREE R-VALUE MOLECULAR REPLACEMENT 0.258 0.232 0.800 0.800 1.200 MASK BULK SOLVENT 2.249 79.796 98 5300 46 505 4651 0.009 0.012 5349 0.001 0.016 4932 1.948 1.844 7341 0.642 1.760 11365 7.054 5.000 581 9.683 5.000 44 0.609 5.000 19 16.610 10.000 876 14.523 10.000 229 0.090 0.200 828 0.009 0.020 5898 0.001 0.020 1161 0.241 0.200 1155 0.200 0.200 4655 0.190 0.200 2540 0.083 0.200 2822 0.180 0.200 173 0.107 0.200 1 0.198 0.200 16 0.145 0.200 50 0.158 0.200 9 0.036 0.200 1 5.889 5.347 2321 5.888 5.348 2321 8.319 9.594 2900 8.319 9.595 2901 7.122 6.480 3028 7.077 6.470 3016 10.642 11.698 4438 10.575 11.683 4421 13.608 57.786 6153 13.615 57.835 6144 0.404 0.410 0.410 2.308 137 2885 3281 0.899 0.879 20 92.1061 0.408 0.381 0.354 0.355 2.371 176 2951 3204 0.895 0.911 20 97.5968 0.330 0.383 0.322 0.326 2.440 204 2893 3097 0.894 0.928 20 100.0000 0.289 0.339 0.301 0.303 2.515 152 2890 3042 0.917 0.938 20 100.0000 0.262 0.350 0.283 0.286 2.597 131 2800 2932 0.926 0.947 20 99.9659 0.237 0.371 0.272 0.278 2.688 164 2685 2849 0.918 0.953 20 100.0000 0.226 0.318 0.264 0.266 2.789 133 2638 2771 0.942 0.956 20 100.0000 0.215 0.347 0.261 0.266 2.903 149 2483 2632 0.917 0.954 20 100.0000 0.222 0.353 0.238 0.244 3.032 133 2401 2534 0.920 0.963 20 100.0000 0.204 0.326 0.237 0.241 3.180 121 2354 2475 0.930 0.963 20 100.0000 0.207 0.311 0.248 0.251 3.352 121 2195 2317 0.938 0.962 20 99.9568 0.225 0.308 0.226 0.230 3.554 98 2110 2210 0.944 0.971 20 99.9095 0.207 0.302 0.214 0.218 3.799 114 1966 2081 0.941 0.972 20 99.9520 0.196 0.274 0.203 0.208 4.103 119 1815 1935 0.955 0.973 20 99.9483 0.191 0.201 0.168 0.170 4.493 113 1689 1802 0.975 0.982 20 100.0000 0.162 0.201 0.145 0.148 5.022 85 1560 1645 0.977 0.987 20 100.0000 0.146 0.256 0.200 0.203 5.795 68 1393 1461 0.964 0.979 20 100.0000 0.199 0.276 0.210 0.214 7.088 61 1188 1249 0.947 0.974 20 100.0000 0.210 0.241 0.166 0.171 9.984 64 927 991 0.962 0.982 20 100.0000 0.188 0.217 0.231 0.231 79.796 29 568 601 0.971 0.951 20 99.3344 0.277 2.249 79.8 9YD2 44763 0.999 0.063 1 21.64 6.9 99.3 2.249 2.31 1.42 3028 0.616 1.0 1 4.6 92.4 refinement REFMAC 5.8.0430 data reduction XDS data scaling XSCALE phasing PHASER 2.8.3 N Ternary complex of DNA polymerase I from Bacillus stearothermophilus, large fragment, bound to DNA containing a thymine dimer and dATP 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 6 N N 7 N N 7 N N 7 N N A THR 308 A THR 13 HELX_P A ALA 313 A ALA 18 5 AA1 6 A ARG 347 A ARG 52 HELX_P A LEU 352 A LEU 57 1 AA2 6 A ASP 354 A ASP 59 HELX_P A ASP 363 A ASP 68 1 AA3 10 A ASP 372 A ASP 77 HELX_P A TRP 382 A TRP 87 1 AA4 11 A LEU 394 A LEU 99 HELX_P A ASP 402 A ASP 107 1 AA5 9 A PRO 403 A PRO 108 HELX_P A GLY 406 A GLY 111 5 AA6 4 A ASP 409 A ASP 114 HELX_P A MET 416 A MET 121 1 AA7 8 A PRO 424 A PRO 129 HELX_P A GLY 430 A GLY 135 1 AA8 7 A ASP 439 A ASP 144 HELX_P A ASN 468 A ASN 173 1 AA9 30 A GLN 470 A GLN 175 HELX_P A GLU 476 A GLU 181 1 AB1 7 A LEU 477 A LEU 182 HELX_P A GLY 492 A GLY 197 1 AB2 16 A ASP 496 A ASP 201 HELX_P A GLY 523 A GLY 228 1 AB3 28 A SER 530 A SER 235 HELX_P A GLU 540 A GLU 245 1 AB4 11 A SER 557 A SER 262 HELX_P A LEU 564 A LEU 269 1 AB5 8 A GLU 569 A GLU 274 HELX_P A THR 586 A THR 291 1 AB6 18 A TYR 587 A TYR 292 HELX_P A VAL 595 A VAL 300 1 AB7 9 A LEU 630 A LEU 335 HELX_P A LYS 635 A LYS 340 1 AB8 6 A ILE 636 A ILE 341 HELX_P A GLN 638 A GLN 343 5 AB9 3 A GLN 656 A GLN 361 HELX_P A GLU 667 A GLU 372 1 AC1 12 A ASP 668 A ASP 373 HELX_P A ARG 677 A ARG 382 1 AC2 10 A ASP 680 A ASP 385 HELX_P A PHE 690 A PHE 395 1 AC3 11 A SER 693 A SER 398 HELX_P A VAL 697 A VAL 402 5 AC4 5 A THR 698 A THR 403 HELX_P A TYR 714 A TYR 419 1 AC5 17 A SER 717 A SER 422 HELX_P A ASN 726 A ASN 431 1 AC6 10 A SER 728 A SER 433 HELX_P A PHE 743 A PHE 448 1 AC7 16 A PHE 743 A PHE 448 HELX_P A GLY 761 A GLY 466 1 AC8 19 A PRO 774 A PRO 479 HELX_P A SER 778 A SER 483 5 AC9 5 A ASN 780 A ASN 485 HELX_P A GLU 818 A GLU 523 1 AD1 39 A GLU 840 A GLU 545 HELX_P A ALA 855 A ALA 560 1 AD2 16 covale 1.618 both B DT 28 B O3' DT 10 1_555 B DDG 29 B P DDG 11 1_555 covale 1.613 both C DA 2 C O3' DA 1 1_555 C TTD 3 C P TTD 2 1_555 covale 1.589 both C TTD 3 C O3' TTD 2 1_555 C DC 4 C P DC 3 1_555 metalc 2.182 A DTP 901 D O3G DTP 1_555 A MN 902 E MN MN 1_555 metalc 2.207 A DTP 901 D O1B DTP 1_555 A MN 902 E MN MN 1_555 metalc 2.778 A DTP 901 D O1A DTP 1_555 A MN 902 E MN MN 1_555 hydrog DC-DG PAIR B DC 19 B O2 DC 1 1_555 C DG 14 C N1 DG 13 1_555 hydrog WATSON-CRICK B DA 20 B N1 DA 2 1_555 C DT 13 C N3 DT 12 1_555 hydrog WATSON-CRICK B DA 20 B N6 DA 2 1_555 C DT 13 C O4 DT 12 1_555 hydrog WATSON-CRICK B DA 21 B N1 DA 3 1_555 C DT 12 C N3 DT 11 1_555 hydrog WATSON-CRICK B DA 21 B N6 DA 3 1_555 C DT 12 C O4 DT 11 1_555 hydrog WATSON-CRICK B DG 22 B N1 DG 4 1_555 C DC 11 C N3 DC 10 1_555 hydrog WATSON-CRICK B DG 22 B N2 DG 4 1_555 C DC 11 C O2 DC 10 1_555 hydrog WATSON-CRICK B DG 22 B O6 DG 4 1_555 C DC 11 C N4 DC 10 1_555 hydrog WATSON-CRICK B DG 23 B N1 DG 5 1_555 C DC 10 C N3 DC 9 1_555 hydrog WATSON-CRICK B DG 23 B N2 DG 5 1_555 C DC 10 C O2 DC 9 1_555 hydrog WATSON-CRICK B DG 23 B O6 DG 5 1_555 C DC 10 C N4 DC 9 1_555 hydrog WATSON-CRICK B DA 24 B N1 DA 6 1_555 C DT 9 C N3 DT 8 1_555 hydrog WATSON-CRICK B DA 24 B N6 DA 6 1_555 C DT 9 C O4 DT 8 1_555 hydrog WATSON-CRICK B DC 25 B N3 DC 7 1_555 C DG 8 C N1 DG 7 1_555 hydrog WATSON-CRICK B DC 25 B N4 DC 7 1_555 C DG 8 C O6 DG 7 1_555 hydrog WATSON-CRICK B DC 25 B O2 DC 7 1_555 C DG 8 C N2 DG 7 1_555 hydrog WATSON-CRICK B DA 26 B N1 DA 8 1_555 C DT 7 C N3 DT 6 1_555 hydrog WATSON-CRICK B DA 26 B N6 DA 8 1_555 C DT 7 C O4 DT 6 1_555 hydrog WATSON-CRICK B DG 27 B N1 DG 9 1_555 C DC 6 C N3 DC 5 1_555 hydrog WATSON-CRICK B DG 27 B N2 DG 9 1_555 C DC 6 C O2 DC 5 1_555 hydrog WATSON-CRICK B DG 27 B O6 DG 9 1_555 C DC 6 C N4 DC 5 1_555 hydrog WATSON-CRICK B DT 28 B N3 DT 10 1_555 C DA 5 C N1 DA 4 1_555 hydrog WATSON-CRICK B DT 28 B O4 DT 10 1_555 C DA 5 C N6 DA 4 1_555 hydrog WATSON-CRICK B DDG 29 B N1 DDG 11 1_555 C DC 4 C N3 DC 3 1_555 hydrog WATSON-CRICK B DDG 29 B N2 DDG 11 1_555 C DC 4 C O2 DC 3 1_555 hydrog WATSON-CRICK B DDG 29 B O6 DDG 11 1_555 C DC 4 C N4 DC 3 1_555 REPLICATION polymerase, complex, REPLICATION A GLU 620 A GLU 325 1 A PRO 621 A PRO 326 -9.52 D9N168_GEOSE UNP 1 1 D9N168 KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAA VALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWEL ERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVI LFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPATKKVHTIFNQALTQTGRLS STEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEV TPNMRRQAKAVNFGIPYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDIT SRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT LRVPLKVDYHYGSTWYDAK 9YD2 PDB 2 1 9YD2 9YD2 PDB 3 1 9YD2 1 579 9YD2 298 876 D9N168 A 1 3 581 19 29 9YD2 19 29 9YD2 B 2 1 11 2 16 9YD2 2 16 9YD2 C 3 1 15 1 initiating methionine MET 296 9YD2 A D9N168 UNP 1 1 expression tag ALA 297 9YD2 A D9N168 UNP 2 1 PRO conflict VAL 713 9YD2 A D9N168 UNP 416 418 6 3 2 4 2 parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A THR 302 A THR 7 A LEU 303 A LEU 8 A GLY 342 A GLY 47 A LEU 346 A LEU 51 A GLY 334 A GLY 39 A ASN 339 A ASN 44 A LYS 315 A LYS 20 A GLU 321 A GLU 26 A LYS 367 A LYS 72 A MET 370 A MET 75 A VAL 390 A VAL 95 A ASP 393 A ASP 98 A LYS 601 A LYS 306 A VAL 602 A VAL 307 A VAL 493 A VAL 198 A VAL 495 A VAL 200 A PHE 640 A PHE 345 A VAL 641 A VAL 346 A ILE 605 A ILE 310 A ASN 607 A ASN 312 A SER 617 A SER 322 A THR 619 A THR 324 A HIS 823 A HIS 528 A GLN 827 A GLN 532 A GLU 831 A GLU 536 A PRO 837 A PRO 542 A TRP 647 A TRP 352 A TYR 654 A TYR 359 A VAL 864 A VAL 569 A GLY 869 A GLY 574 A TYR 762 A TYR 467 A THR 764 A THR 469 A ARG 770 A ARG 475 A TYR 772 A TYR 477 152 P 31 2 1