0.012979 0.000000 0.000000 0.000000 0.012979 0.000000 0.000000 0.000000 0.046486 0.00000 0.00000 0.00000 Ruck, V. Kanazawa, H. Huang, Z. Kondo, J. Vosch, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 77.045 77.045 21.512 Ag 1 107.868 SILVER ION non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer N 1 N AG N 2 N CL N 3 N O N 4 N P N 5 N O N 6 N O N 7 N O N 8 N C N 9 R C N 10 N O N 11 S C N 12 N O N 13 N C N 14 R C Y 15 N N Y 16 N C Y 17 N N Y 18 N C Y 19 N C N 20 N N Y 21 N N Y 22 N C Y 23 N N Y 24 N C N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N O N 40 N P N 41 N O N 42 N O N 43 N O N 44 N C N 45 R C N 46 N O N 47 S C N 48 N O N 49 N C N 50 R C N 51 N N N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N C N 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N P N 75 N O N 76 N O N 77 N O N 78 N C N 79 R C N 80 N O N 81 S C N 82 N O N 83 N C N 84 R C Y 85 N N Y 86 N C Y 87 N N Y 88 N C N 89 N C N 90 N O N 91 N N N 92 N C N 93 N N N 94 N N Y 95 N C N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N P N 112 N O N 113 N O N 114 N O N 115 N C N 116 R C N 117 N O N 118 S C N 119 N O N 120 N C N 121 R C N 122 N N N 123 N C N 124 N O N 125 N N N 126 N C N 127 N O N 128 N C N 129 N C N 130 N C N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N O N 147 N H N 148 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing UK Inorg Chem Front 2052-1553 10.1039/D5QI02482J Bridging the gap: thymine segments to create single-strand versions of DNA2-[Ag16Cl2]8+ 2026 10.2210/pdb9xv9/pdb pdb_00009xv9 100 1 N PIXEL 2025-09-09 DECTRIS EIGER2 X CdTe 9M SINGLE WAVELENGTH M x-ray 1 0.97761 1.0 MicroMAX MAX IV 0.97761 SYNCHROTRON MAX IV BEAMLINE MicroMAX 7593.911 DNA (5'-D(*CP*AP*CP*CP*TP*AP*GP*CP*GP*AP*TP*CP*AP*CP*CP*TP*AP*GP*CP*GP*A)-3') 2 syn polymer 107.868 SILVER ION 32 syn non-polymer 35.453 CHLORIDE ION 4 syn non-polymer 18.015 water 35 nat water no no (DC)(DA)(DC)(DC)(DT)(DA)(DG)(DC)(DG)(DA)(DT)(DT)(DT)(DT)(DT)(DC)(DA)(DC)(DC)(DT) (DA)(DG)(DC)(DG)(DA) CACCTAGCGATTTTTCACCTAGCGA A,C polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n 1 2.10 41.48 VAPOR DIFFUSION, HANGING DROP 7.0 polyethylene glycol 3350, spermine, potassium nitrate, and 3-(N-morpholino)propanesulfonic acid 293 -50.825 2 A 5 A 22 -110.735 A_DT5:DG22_A 1 -32.761 0.056 0.178 -5.411 -54.227 A 25 A 23 97.309 A_DA25:DC23_A 2 -9.010 -6.932 1.800 0.001 1.681 A 19 A 24 -88.873 A_DC19:DG24_A 3 -37.679 1.306 -1.648 1.598 23.447 A 4 A 16 -91.179 A_DC4:DC16_A 4 20.907 0.989 0.550 -3.570 -37.992 A 1 A 3 -81.654 A_DC1:DC3_A 5 11.805 1.706 0.488 -3.182 -52.000 2 C 5 C 22 -111.943 C_DT5:DG22_C 6 -33.262 0.101 0.239 -5.494 -53.363 C 25 C 23 102.322 C_DA25:DC23_C 7 -9.905 -6.995 1.905 0.450 5.737 C 19 C 24 -90.222 C_DC19:DG24_C 8 -40.450 1.320 -1.331 1.652 22.699 C 4 C 16 -87.165 C_DC4:DC16_C 9 20.074 1.032 0.727 -3.417 -37.341 C 1 C 3 -81.607 C_DC1:DC3_C 10 12.493 1.634 0.385 -3.152 2.996 -178.101 A A 5 25 62.616 A A 22 23 4.376 -124.837 1.518 -3.287 AA_DT5DA25:DC23DG22_AA 1 -124.775 -62.586 -114.216 2.413 -0.010 -4.234 -101.042 A A 25 19 -9.657 A A 23 24 -4.314 14.790 -0.357 0.839 AA_DA25DC19:DG24DC23_AA 2 25.731 16.801 -97.746 -0.239 -0.761 -1.835 174.867 A A 19 4 4.896 A A 24 16 -1.852 9.783 0.874 3.083 AA_DC19DC4:DC16DG24_AA 3 14.252 -7.133 174.808 1.546 -0.443 0.418 -111.021 A A 4 1 -24.634 A A 16 3 -0.626 39.916 1.445 -2.828 AA_DC4DC1:DC3DC16_AA 4 -30.865 -19.048 -102.494 1.732 0.889 2.957 -179.203 C C 5 25 60.435 C C 22 23 3.524 -120.820 0.325 -4.409 CC_DT5DA25:DC23DG22_CC 5 -127.454 -63.754 -159.040 2.409 -0.053 -4.321 -103.612 C C 25 19 -11.028 C C 23 24 -4.354 17.197 -0.225 0.928 CC_DA25DC19:DG24DC23_CC 6 25.837 16.569 -100.159 -0.253 -0.651 -1.725 174.588 C C 19 4 3.951 C C 24 16 -1.739 7.893 0.828 3.081 CC_DC19DC4:DC16DG24_CC 7 11.692 -5.853 174.546 1.545 -0.419 0.419 -108.436 C C 4 1 -24.084 C C 16 3 -0.638 38.379 1.430 -2.814 CC_DC4DC1:DC3DC16_CC 8 -30.892 -19.385 -99.932 1.753 0.896 repository Initial release 1 0 2026-01-28 Denmark Independent Research Fund Denmark - Medical Sciences 0136-00024B Denmark Novo Nordisk Foundation NNF22OC0073734 Sweden Swedish Research Council 2018-07152 Denmark Novo Nordisk Foundation NNF17CC0030666 Japan Japan Agency for Medical Research and Development (AMED) JP23ama121014 j.kondo@sophia.ac.jp 0000-0002-5682-3685 Jiro Kondo principal investigator/group leader N PDBJ Y PDBJ 2025-11-26 REL REL AG AG SUBJECT OF INVESTIGATION CL CL SUBJECT OF INVESTIGATION AG SILVER ION CL CHLORIDE ION HOH water 32630 synthetic construct sample 1 25 Y N AG 1 2 AG AG 101 A AG 2 2 AG AG 102 A AG 3 2 AG AG 103 A AG 4 2 AG AG 104 A AG 5 2 AG AG 105 A AG 6 2 AG AG 106 A AG 7 2 AG AG 107 A AG 8 2 AG AG 108 A AG 9 2 AG AG 109 A AG 10 2 AG AG 110 A AG 11 2 AG AG 111 A AG 12 2 AG AG 112 A AG 13 2 AG AG 113 A AG 14 2 AG AG 114 A AG 15 2 AG AG 115 A AG 16 2 AG AG 116 A CL 17 3 CL CL 117 A CL 18 3 CL CL 118 A AG 1 2 AG AG 101 C AG 2 2 AG AG 102 C AG 3 2 AG AG 103 C AG 4 2 AG AG 104 C AG 5 2 AG AG 105 C AG 6 2 AG AG 106 C AG 7 2 AG AG 107 C AG 8 2 AG AG 108 C AG 9 2 AG AG 109 C AG 10 2 AG AG 110 C AG 11 2 AG AG 111 C AG 12 2 AG AG 112 C AG 13 2 AG AG 113 C AG 14 2 AG AG 114 C AG 15 2 AG AG 115 C AG 16 2 AG AG 116 C CL 17 3 CL CL 117 C CL 18 3 CL CL 118 C HOH 33 4 HOH HOH 201 A HOH 18 4 HOH HOH 202 A HOH 21 4 HOH HOH 203 A HOH 16 4 HOH HOH 204 A HOH 15 4 HOH HOH 205 A HOH 20 4 HOH HOH 206 A HOH 5 4 HOH HOH 207 A HOH 34 4 HOH HOH 208 A HOH 4 4 HOH HOH 209 A HOH 7 4 HOH HOH 210 A HOH 19 4 HOH HOH 211 A HOH 1 4 HOH HOH 212 A HOH 23 4 HOH HOH 213 A HOH 22 4 HOH HOH 214 A HOH 8 4 HOH HOH 215 A HOH 10 4 HOH HOH 216 A HOH 17 4 HOH HOH 217 A HOH 32 4 HOH HOH 218 A HOH 12 4 HOH HOH 219 A HOH 35 4 HOH HOH 201 C HOH 29 4 HOH HOH 202 C HOH 9 4 HOH HOH 203 C HOH 13 4 HOH HOH 204 C HOH 25 4 HOH HOH 205 C HOH 24 4 HOH HOH 206 C HOH 14 4 HOH HOH 207 C HOH 6 4 HOH HOH 208 C HOH 3 4 HOH HOH 209 C HOH 30 4 HOH HOH 210 C HOH 2 4 HOH HOH 211 C HOH 11 4 HOH HOH 212 C HOH 27 4 HOH HOH 213 C HOH 28 4 HOH HOH 214 C HOH 26 4 HOH HOH 215 C HOH 31 4 HOH HOH 216 C DC 1 n 1 DC 1 A DA 2 n 2 DA 2 A DC 3 n 3 DC 3 A DC 4 n 4 DC 4 A DT 5 n 5 DT 5 A DA 6 n 6 DA 6 A DG 7 n 7 DG 7 A DC 8 n 8 DC 8 A DG 9 n 9 DG 9 A DA 10 n 10 DA 10 A n 11 11 A n 12 12 A n 13 13 A n 14 14 A DT 15 n 15 DT 15 A DC 16 n 16 DC 16 A DA 17 n 17 DA 17 A DC 18 n 18 DC 18 A DC 19 n 19 DC 19 A DT 20 n 20 DT 20 A DA 21 n 21 DA 21 A DG 22 n 22 DG 22 A DC 23 n 23 DC 23 A DG 24 n 24 DG 24 A DA 25 n 25 DA 25 A DC 1 n 1 DC 1 C DA 2 n 2 DA 2 C DC 3 n 3 DC 3 C DC 4 n 4 DC 4 C DT 5 n 5 DT 5 C DA 6 n 6 DA 6 C DG 7 n 7 DG 7 C DC 8 n 8 DC 8 C DG 9 n 9 DG 9 C DA 10 n 10 DA 10 C n 11 11 C n 12 12 C n 13 13 C n 14 14 C DT 15 n 15 DT 15 C DC 16 n 16 DC 16 C DA 17 n 17 DA 17 C DC 18 n 18 DC 18 C DC 19 n 19 DC 19 C DT 20 n 20 DT 20 C DA 21 n 21 DA 21 C DG 22 n 22 DG 22 C DC 23 n 23 DC 23 C DG 24 n 24 DG 24 C DA 25 n 25 DA 25 C author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric none A DC 1 A N3 DC 1 1_555 A AG 114 P AG AG 1_555 A DC 19 A O2 DC 19 1_555 92.3 A DC 1 A O2 DC 1 1_555 A AG 115 Q AG AG 1_555 A DC 3 A N3 DC 3 1_555 97.5 A DA 2 A N1 DA 2 1_555 A AG 116 R AG AG 1_555 A DC 16 A O2 DC 16 1_555 87.7 A DA 2 A N1 DA 2 1_555 A AG 116 R AG AG 1_555 A DC 18 A N3 DC 18 1_555 111.8 A DC 16 A O2 DC 16 1_555 A AG 116 R AG AG 1_555 A DC 18 A N3 DC 18 1_555 87.8 A DC 4 A O2 DC 4 1_555 A AG 110 L AG AG 1_555 A DG 24 A N1 DG 24 1_555 86.4 A DC 4 A N3 DC 4 1_555 A AG 112 N AG AG 1_555 A DG 9 A O6 DG 9 1_555 89.0 A DC 4 A O2 DC 4 1_555 A AG 113 O AG AG 1_555 A DC 16 A N3 DC 16 1_555 101.7 A DA 6 A N7 DA 6 1_555 A AG 101 C AG AG 1_555 A DG 7 A O6 DG 7 1_555 90.2 A DA 6 A N7 DA 6 1_555 A AG 101 C AG AG 1_555 A DA 21 A OP2 DA 21 1_555 87.6 A DG 7 A O6 DG 7 1_555 A AG 101 C AG AG 1_555 A DA 21 A OP2 DA 21 1_555 93.6 A DA 6 A OP2 DA 6 1_555 A AG 102 D AG AG 1_555 A DA 21 A N7 DA 21 1_555 93.2 A DA 6 A OP2 DA 6 1_555 A AG 102 D AG AG 1_555 A DG 22 A O6 DG 22 1_555 93.5 A DA 21 A N7 DA 21 1_555 A AG 102 D AG AG 1_555 A DG 22 A O6 DG 22 1_555 96.2 A DA 6 A OP1 DA 6 1_555 A AG 104 F AG AG 1_555 A DG 7 A N7 DG 7 1_555 94.5 A DG 9 A N1 DG 9 1_555 A AG 109 K AG AG 1_555 A DC 19 A O2 DC 19 1_555 78.9 A DC 19 A N3 DC 19 1_555 A AG 111 M AG AG 1_555 A DG 24 A O6 DG 24 1_555 88.9 A DA 21 A OP1 DA 21 1_555 A AG 103 E AG AG 1_555 A DG 22 A N7 DG 22 1_555 104.8 C DC 1 B O2 DC 1 1_555 C AG 101 U AG AG 1_555 C DC 3 B N3 DC 3 1_555 97.9 C DC 1 B N3 DC 1 1_555 C AG 104 X AG AG 1_555 C DC 19 B O2 DC 19 1_555 93.4 C DA 2 B N1 DA 2 1_555 C AG 102 V AG AG 1_555 C DC 16 B O2 DC 16 1_555 88.8 C DA 2 B N1 DA 2 1_555 C AG 102 V AG AG 1_555 C DC 18 B N3 DC 18 1_555 112.2 C DC 16 B O2 DC 16 1_555 C AG 102 V AG AG 1_555 C DC 18 B N3 DC 18 1_555 90.5 C DC 3 B O2 DC 3 1_555 C AG 103 W AG AG 1_555 C DC 4 B O2 DC 4 1_555 77.4 C DC 3 B O2 DC 3 1_555 C AG 103 W AG AG 1_555 C DC 16 B N3 DC 16 1_555 80.4 C DC 4 B O2 DC 4 1_555 C AG 103 W AG AG 1_555 C DC 16 B N3 DC 16 1_555 99.2 C DC 4 B N3 DC 4 1_555 C AG 106 Z AG AG 1_555 C DG 9 B O6 DG 9 1_555 90.7 C DC 4 B O2 DC 4 1_555 C AG 108 BA AG AG 1_555 C DG 24 B N1 DG 24 1_555 83.3 C DA 6 B OP1 DA 6 1_555 C AG 114 HA AG AG 1_555 C DG 7 B N7 DG 7 1_555 91.5 C DA 6 B N7 DA 6 1_555 C AG 115 IA AG AG 1_555 C DG 7 B O6 DG 7 1_555 91.3 C DA 6 B N7 DA 6 1_555 C AG 115 IA AG AG 1_555 C DA 21 B OP2 DA 21 1_555 92.7 C DG 7 B O6 DG 7 1_555 C AG 115 IA AG AG 1_555 C DA 21 B OP2 DA 21 1_555 99.6 C DA 6 B OP2 DA 6 1_555 C AG 116 JA AG AG 1_555 C DA 21 B N7 DA 21 1_555 94.5 C DA 6 B OP2 DA 6 1_555 C AG 116 JA AG AG 1_555 C DG 22 B O6 DG 22 1_555 98.7 C DA 21 B N7 DA 21 1_555 C AG 116 JA AG AG 1_555 C DG 22 B O6 DG 22 1_555 94.6 C DG 7 B O6 DG 7 1_555 C AG 112 FA AG AG 1_555 C DC 8 B O2 DC 8 1_555 80.6 C DG 9 B N1 DG 9 1_555 C AG 107 AA AG AG 1_555 C DC 19 B O2 DC 19 1_555 79.3 C DC 19 B N3 DC 19 1_555 C AG 105 Y AG AG 1_555 C DG 24 B O6 DG 24 1_555 90.0 C DA 21 B OP1 DA 21 1_555 C AG 113 GA AG AG 1_555 C DG 22 B N7 DG 22 1_555 102.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A DT 11 A DT 11 1 Y 1 A DT 12 A DT 12 1 Y 1 A DT 13 A DT 13 1 Y 1 A DT 14 A DT 14 1 Y 1 C DT 11 B DT 11 1 Y 1 C DT 12 B DT 12 1 Y 1 C DT 13 B DT 13 1 Y 1 C DT 14 B DT 14 1 Y 0.1616 0.1348 0.1375 2.00 38.52 1641 16691 9.83 99.27 0.15 1 FREE R-VALUE 1.94 AB INITIO PHASING 17.11 0.90 1.10 ML FLAT BULK SOLVENT MODEL 2.00 38.52 35 917 36 846 0 0.010 946 1.612 1448 33.378 406 0.151 166 0.012 42 0.1435 0.1569 2.06 134 1237 98.00 0.1254 0.1205 2.12 144 1248 100.00 0.1195 0.1171 2.20 140 1249 98.00 0.1340 0.1022 2.29 139 1254 100.00 0.1270 0.1056 2.39 138 1276 99.00 0.1054 0.1132 2.52 141 1200 100.00 0.1712 0.1136 2.67 134 1312 100.00 0.1527 0.1377 2.88 120 1231 99.00 0.1977 0.1702 3.17 135 1286 100.00 0.2653 0.1862 3.63 134 1265 100.00 0.2206 0.1734 4.57 139 1250 100.00 0.1483 0.1192 38.52 143 1242 99.00 2.0 38.52 9XV9 16707 0.997 0.089 0.096 1 15.31 6.98 99.4 0.28 2.00 2.05 1214 0.981 0.303 1 0.224 2.05 2.11 1225 0.988 0.242 1 0.178 2.11 2.17 1176 0.991 0.193 1 0.169 2.17 2.23 1098 0.989 0.182 1 0.133 2.23 2.31 1114 0.992 0.143 1 0.119 2.31 2.39 1102 0.994 0.129 1 0.105 2.39 2.48 980 0.997 0.113 1 0.101 2.48 2.58 1030 0.994 0.109 1 0.093 2.58 2.69 952 0.995 0.1 1 0.092 2.69 2.82 882 0.995 0.099 1 0.097 2.82 2.98 859 0.995 0.104 1 0.098 2.98 3.16 846 0.996 0.106 1 0.092 3.16 3.38 749 0.996 0.099 1 0.08 3.38 3.65 739 0.996 0.086 1 0.073 3.65 3.99 657 0.997 0.078 1 0.069 3.99 4.47 593 0.997 0.075 1 0.065 4.47 5.16 521 0.997 0.07 1 0.059 5.16 6.32 448 0.997 0.065 1 0.044 6.32 8.93 343 0.996 0.047 1 0.046 8.93 38.52 179 0.996 0.051 1 refinement PHENIX (1.20.1_4487: ???) data scaling XSCALE data extraction PDB_EXTRACT data reduction XDS phasing Sir2014 2019 phasing AutoSol model building Coot N Crystal structure of single-strand DNA-stabilized Ag16 nanocluster: T5 linker 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 3 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 3 N N 4 N N 4 N N metalc 2.369 A DC 1 A N3 DC 1 1_555 A AG 114 P AG AG 1_555 metalc 2.473 A DC 1 A O2 DC 1 1_555 A AG 115 Q AG AG 1_555 metalc 2.449 A DA 2 A N1 DA 2 1_555 A AG 116 R AG AG 1_555 metalc 2.308 A DC 3 A N3 DC 3 1_555 A AG 115 Q AG AG 1_555 metalc 2.574 A DC 4 A O2 DC 4 1_555 A AG 110 L AG AG 1_555 metalc 2.428 A DC 4 A N3 DC 4 1_555 A AG 112 N AG AG 1_555 metalc 2.493 A DC 4 A O2 DC 4 1_555 A AG 113 O AG AG 1_555 metalc 2.368 A DA 6 A N7 DA 6 1_555 A AG 101 C AG AG 1_555 metalc 2.213 A DA 6 A OP2 DA 6 1_555 A AG 102 D AG AG 1_555 metalc 2.455 A DA 6 A OP1 DA 6 1_555 A AG 104 F AG AG 1_555 metalc 2.207 A DG 7 A O6 DG 7 1_555 A AG 101 C AG AG 1_555 metalc 2.215 A DG 7 A N7 DG 7 1_555 A AG 104 F AG AG 1_555 metalc 2.680 A DC 8 A O2 DC 8 1_555 A AG 106 H AG AG 1_555 metalc 2.322 A DC 8 A N3 DC 8 1_555 A AG 107 I AG AG 1_555 metalc 2.382 A DG 9 A N1 DG 9 1_555 A AG 109 K AG AG 1_555 metalc 2.425 A DG 9 A O6 DG 9 1_555 A AG 112 N AG AG 1_555 metalc 2.371 A DC 16 A N3 DC 16 1_555 A AG 113 O AG AG 1_555 metalc 2.336 A DC 16 A O2 DC 16 1_555 A AG 116 R AG AG 1_555 metalc 2.301 A DC 18 A N3 DC 18 1_555 A AG 116 R AG AG 1_555 metalc 2.653 A DC 19 A O2 DC 19 1_555 A AG 109 K AG AG 1_555 metalc 2.427 A DC 19 A N3 DC 19 1_555 A AG 111 M AG AG 1_555 metalc 2.542 A DC 19 A O2 DC 19 1_555 A AG 114 P AG AG 1_555 metalc 2.448 A DA 21 A OP2 DA 21 1_555 A AG 101 C AG AG 1_555 metalc 2.246 A DA 21 A N7 DA 21 1_555 A AG 102 D AG AG 1_555 metalc 2.303 A DA 21 A OP1 DA 21 1_555 A AG 103 E AG AG 1_555 metalc 2.222 A DG 22 A O6 DG 22 1_555 A AG 102 D AG AG 1_555 metalc 2.263 A DG 22 A N7 DG 22 1_555 A AG 103 E AG AG 1_555 metalc 2.614 A DG 22 A O6 DG 22 1_555 A AG 105 G AG AG 1_555 metalc 2.226 A DC 23 A N3 DC 23 1_555 A AG 108 J AG AG 1_555 metalc 2.264 A DG 24 A N1 DG 24 1_555 A AG 110 L AG AG 1_555 metalc 2.331 A DG 24 A O6 DG 24 1_555 A AG 111 M AG AG 1_555 metalc 2.426 C DC 1 B O2 DC 1 1_555 C AG 101 U AG AG 1_555 metalc 2.363 C DC 1 B N3 DC 1 1_555 C AG 104 X AG AG 1_555 metalc 2.430 C DA 2 B N1 DA 2 1_555 C AG 102 V AG AG 1_555 metalc 2.265 C DC 3 B N3 DC 3 1_555 C AG 101 U AG AG 1_555 metalc 2.633 C DC 3 B O2 DC 3 1_555 C AG 103 W AG AG 1_555 metalc 2.493 C DC 4 B O2 DC 4 1_555 C AG 103 W AG AG 1_555 metalc 2.430 C DC 4 B N3 DC 4 1_555 C AG 106 Z AG AG 1_555 metalc 2.523 C DC 4 B O2 DC 4 1_555 C AG 108 BA AG AG 1_555 metalc 2.413 C DA 6 B OP1 DA 6 1_555 C AG 114 HA AG AG 1_555 metalc 2.230 C DA 6 B N7 DA 6 1_555 C AG 115 IA AG AG 1_555 metalc 2.210 C DA 6 B OP2 DA 6 1_555 C AG 116 JA AG AG 1_555 metalc 2.606 C DG 7 B O6 DG 7 1_555 C AG 112 FA AG AG 1_555 metalc 2.224 C DG 7 B N7 DG 7 1_555 C AG 114 HA AG AG 1_555 metalc 2.200 C DG 7 B O6 DG 7 1_555 C AG 115 IA AG AG 1_555 metalc 2.270 C DC 8 B N3 DC 8 1_555 C AG 109 CA AG AG 1_555 metalc 2.652 C DC 8 B O2 DC 8 1_555 C AG 112 FA AG AG 1_555 metalc 2.426 C DG 9 B O6 DG 9 1_555 C AG 106 Z AG AG 1_555 metalc 2.377 C DG 9 B N1 DG 9 1_555 C AG 107 AA AG AG 1_555 metalc 2.435 C DC 16 B O2 DC 16 1_555 C AG 102 V AG AG 1_555 metalc 2.404 C DC 16 B N3 DC 16 1_555 C AG 103 W AG AG 1_555 metalc 2.241 C DC 18 B N3 DC 18 1_555 C AG 102 V AG AG 1_555 metalc 2.554 C DC 19 B O2 DC 19 1_555 C AG 104 X AG AG 1_555 metalc 2.431 C DC 19 B N3 DC 19 1_555 C AG 105 Y AG AG 1_555 metalc 2.691 C DC 19 B O2 DC 19 1_555 C AG 107 AA AG AG 1_555 metalc 2.318 C DA 21 B OP1 DA 21 1_555 C AG 113 GA AG AG 1_555 metalc 2.277 C DA 21 B OP2 DA 21 1_555 C AG 115 IA AG AG 1_555 metalc 2.205 C DA 21 B N7 DA 21 1_555 C AG 116 JA AG AG 1_555 metalc 2.607 C DG 22 B O6 DG 22 1_555 C AG 111 EA AG AG 1_555 metalc 2.276 C DG 22 B N7 DG 22 1_555 C AG 113 GA AG AG 1_555 metalc 2.221 C DG 22 B O6 DG 22 1_555 C AG 116 JA AG AG 1_555 metalc 2.238 C DC 23 B N3 DC 23 1_555 C AG 110 DA AG AG 1_555 metalc 2.240 C DG 24 B O6 DG 24 1_555 C AG 105 Y AG AG 1_555 metalc 2.253 C DG 24 B N1 DG 24 1_555 C AG 108 BA AG AG 1_555 hydrog DC-DC MISPAIR A DC 1 A O2 DC 1 1_555 A DC 3 A N4 DC 3 1_555 hydrog DC-DC MISPAIR A DC 1 A N4 DC 1 1_555 A DC 19 A O2 DC 19 1_555 hydrog TYPE_5_PAIR A DA 2 A N6 DA 2 1_555 A DA 10 A N1 DA 10 1_555 hydrog TYPE_5_PAIR A DA 2 A N7 DA 2 1_555 A DA 10 A N6 DA 10 1_555 hydrog DA-DC MISPAIR A DA 2 A N6 DA 2 1_555 A DC 18 A O2 DC 18 1_555 hydrog DC-DC MISPAIR A DC 3 A O2 DC 3 1_555 A DC 16 A N4 DC 16 1_555 hydrog DC-DG PAIR A DC 4 A N4 DC 4 1_555 A DG 9 A O6 DG 9 1_555 hydrog DC-DC MISPAIR A DC 4 A O2 DC 4 1_555 A DC 16 A N4 DC 16 1_555 hydrog DC-DG PAIR A DC 4 A O2 DC 4 1_555 A DG 24 A N2 DG 24 1_555 hydrog DT-DG MISPAIR A DT 5 A O2 DT 5 1_555 A DG 22 A N2 DG 22 1_555 hydrog DG-DC PAIR A DG 9 A N2 DG 9 1_555 A DC 19 A O2 DC 19 1_555 hydrog REVERSED WATSON-CRICK A DT 15 A N3 DT 15 1_555 C DA 17 B N1 DA 17 1_555 hydrog REVERSED WATSON-CRICK A DT 15 A O2 DT 15 1_555 C DA 17 B N6 DA 17 1_555 hydrog DC-DC MISPAIR A DC 16 A O2 DC 16 1_555 A DC 18 A N4 DC 18 1_555 hydrog REVERSED WATSON-CRICK A DA 17 A N1 DA 17 1_555 C DT 15 B N3 DT 15 1_555 hydrog REVERSED WATSON-CRICK A DA 17 A N6 DA 17 1_555 C DT 15 B O2 DT 15 1_555 hydrog DC-DG PAIR A DC 19 A N4 DC 19 1_555 A DG 24 A O6 DG 24 1_555 hydrog DC-DA MISPAIR A DC 23 A O2 DC 23 1_555 A DA 25 A N6 DA 25 1_555 hydrog DC-DC MISPAIR C DC 1 B O2 DC 1 1_555 C DC 3 B N4 DC 3 1_555 hydrog DC-DC MISPAIR C DC 1 B N4 DC 1 1_555 C DC 19 B O2 DC 19 1_555 hydrog TYPE_5_PAIR C DA 2 B N6 DA 2 1_555 C DA 10 B N1 DA 10 1_555 hydrog TYPE_5_PAIR C DA 2 B N7 DA 2 1_555 C DA 10 B N6 DA 10 1_555 hydrog DA-DC MISPAIR C DA 2 B N6 DA 2 1_555 C DC 18 B O2 DC 18 1_555 hydrog DC-DC MISPAIR C DC 3 B O2 DC 3 1_555 C DC 16 B N4 DC 16 1_555 hydrog DC-DG PAIR C DC 4 B N4 DC 4 1_555 C DG 9 B O6 DG 9 1_555 hydrog DC-DC MISPAIR C DC 4 B O2 DC 4 1_555 C DC 16 B N4 DC 16 1_555 hydrog DC-DG PAIR C DC 4 B O2 DC 4 1_555 C DG 24 B N2 DG 24 1_555 hydrog DT-DG MISPAIR C DT 5 B O2 DT 5 1_555 C DG 22 B N2 DG 22 1_555 hydrog DC-DC MISPAIR C DC 16 B O2 DC 16 1_555 C DC 18 B N4 DC 18 1_555 hydrog DC-DG PAIR C DC 19 B N4 DC 19 1_555 C DG 24 B O6 DG 24 1_555 hydrog DC-DA MISPAIR C DC 23 B O2 DC 23 1_555 C DA 25 B N6 DA 25 1_555 DNA DNA, silver, nanocluster, emitter 9XV9 PDB 1 1 9XV9 1 25 9XV9 1 25 9XV9 A 1 1 25 1 25 9XV9 1 25 9XV9 C 1 1 25 75 P 4