1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Tomizawa, T. Kigawa, T. Koshiba, S. Inoue, M. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 R C N 60 N C N 61 N O N 62 N C N 63 N S N 64 N O N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N N N 73 S C N 74 N C N 75 N O N 76 N C N 77 N C N 78 N C N 79 N O N 80 N N N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N N N 93 S C N 94 N C N 95 N O N 96 N C N 97 N C N 98 N C N 99 N O N 100 N O N 101 N O N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 N C N 113 N C N 114 N O N 115 N O N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N N N 122 S C N 123 N C N 124 N O N 125 N C N 126 N C N 127 N C N 128 N C N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N N N 144 S C N 145 N C N 146 N O N 147 N C N 148 N C N 149 N C N 150 N C N 151 N N N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N N N 169 S C N 170 N C N 171 N O N 172 N C N 173 N C N 174 N S N 175 N C N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 N C Y 193 N C Y 194 N C Y 195 N C Y 196 N C Y 197 N C Y 198 N C N 199 N O N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N N N 212 S C N 213 N C N 214 N O N 215 N C N 216 N C N 217 N C N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N N N 229 S C N 230 N C N 231 N O N 232 N C N 233 N O N 234 N O N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N N N 243 S C N 244 N C N 245 N O N 246 R C N 247 N O N 248 N C N 249 N O N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C Y 264 N C Y 265 N C Y 266 N C Y 267 N C Y 268 N C Y 269 N C N 270 N O N 271 N O N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 N C N 288 N C N 289 N C N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N doub N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing Y 189 N doub Y 190 N sing Y 191 N sing N 192 N sing Y 193 N doub N 194 N sing Y 195 N doub N 196 N sing Y 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing Y 258 N doub Y 259 N sing Y 260 N sing N 261 N sing Y 262 N doub N 263 N sing Y 264 N doub N 265 N sing Y 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing To be Published 0353 Solution structure of the FYVE domain from human FYVE domain containing 27 isoform b protein 10.2210/pdb1x4u/pdb pdb_00001x4u 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 8661.684 Zinc finger, FYVE domain containing 27 isoform b FYVE domain 1 man polymer 65.409 ZINC ION 2 syn non-polymer no no GSSGSSGRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSKSG PSSG GSSGSSGRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSKSG PSSG A hsi002022403.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample Cell-free protein synthesis ZFYVE27 9606 Homo sapiens PLASMID P041206-02 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Data collection 1 0 2005-11-15 1 1 2008-04-30 1 2 2011-07-13 1 3 2022-03-02 1 4 2024-05-29 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y PDBJ Y PDBJ 2005-05-15 REL REL ZN ZINC ION target function, structures with the lowest energy, structures with the least restraint violations 100 20 3D_15N-separated_NOESY 3D_13C-separated_NOESY 120mM 7.0 ambient 298 K torsion angle dynamics, restrainted molecular dynamics 1 lowest energy 1.83mM zf-AN1 domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 50uM EDTA-2ZN; 0.02% NaN3; 10% D2O 90% H2O/10% D2O Bruker collection XwinNMR 3.5 Delaglio, F. processing NMRPipe 20030801 Johnson, B.A. data analysis NMRView 5.0.4 Kobayashi, N. data analysis KUJIRA 0.9295 Guntert, P. structure solution CYANA 2.0.17 Guntert, P. refinement CYANA 2.0.17 800 Bruker AVANCE ZN 201 2 ZN ZN 201 A ZN 401 2 ZN ZN 401 A GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A GLY 4 n 4 GLY 4 A SER 5 n 5 SER 5 A SER 6 n 6 SER 6 A GLY 7 n 7 GLY 7 A ARG 8 n 8 ARG 8 A TYR 9 n 9 TYR 9 A PRO 10 n 10 PRO 10 A THR 11 n 11 THR 11 A ASN 12 n 12 ASN 12 A ASN 13 n 13 ASN 13 A PHE 14 n 14 PHE 14 A GLY 15 n 15 GLY 15 A ASN 16 n 16 ASN 16 A CYS 17 n 17 CYS 17 A THR 18 n 18 THR 18 A GLY 19 n 19 GLY 19 A CYS 20 n 20 CYS 20 A SER 21 n 21 SER 21 A ALA 22 n 22 ALA 22 A THR 23 n 23 THR 23 A PHE 24 n 24 PHE 24 A SER 25 n 25 SER 25 A VAL 26 n 26 VAL 26 A LEU 27 n 27 LEU 27 A LYS 28 n 28 LYS 28 A LYS 29 n 29 LYS 29 A ARG 30 n 30 ARG 30 A ARG 31 n 31 ARG 31 A SER 32 n 32 SER 32 A CYS 33 n 33 CYS 33 A SER 34 n 34 SER 34 A ASN 35 n 35 ASN 35 A CYS 36 n 36 CYS 36 A GLY 37 n 37 GLY 37 A ASN 38 n 38 ASN 38 A SER 39 n 39 SER 39 A PHE 40 n 40 PHE 40 A CYS 41 n 41 CYS 41 A SER 42 n 42 SER 42 A ARG 43 n 43 ARG 43 A CYS 44 n 44 CYS 44 A CYS 45 n 45 CYS 45 A SER 46 n 46 SER 46 A PHE 47 n 47 PHE 47 A LYS 48 n 48 LYS 48 A VAL 49 n 49 VAL 49 A PRO 50 n 50 PRO 50 A LYS 51 n 51 LYS 51 A SER 52 n 52 SER 52 A SER 53 n 53 SER 53 A MET 54 n 54 MET 54 A GLY 55 n 55 GLY 55 A ALA 56 n 56 ALA 56 A THR 57 n 57 THR 57 A ALA 58 n 58 ALA 58 A PRO 59 n 59 PRO 59 A GLU 60 n 60 GLU 60 A ALA 61 n 61 ALA 61 A GLN 62 n 62 GLN 62 A ARG 63 n 63 ARG 63 A GLU 64 n 64 GLU 64 A THR 65 n 65 THR 65 A VAL 66 n 66 VAL 66 A PHE 67 n 67 PHE 67 A VAL 68 n 68 VAL 68 A CYS 69 n 69 CYS 69 A ALA 70 n 70 ALA 70 A SER 71 n 71 SER 71 A CYS 72 n 72 CYS 72 A ASN 73 n 73 ASN 73 A GLN 74 n 74 GLN 74 A THR 75 n 75 THR 75 A LEU 76 n 76 LEU 76 A SER 77 n 77 SER 77 A LYS 78 n 78 LYS 78 A SER 79 n 79 SER 79 A GLY 80 n 80 GLY 80 A PRO 81 n 81 PRO 81 A SER 82 n 82 SER 82 A SER 83 n 83 SER 83 A GLY 84 n 84 GLY 84 A author_defined_assembly 1 monomeric A CYS 17 A SG CYS 17 1_555 A ZN 201 B ZN ZN 1_555 A CYS 20 A SG CYS 20 1_555 114.0 A CYS 17 A SG CYS 17 1_555 A ZN 201 B ZN ZN 1_555 A CYS 41 A SG CYS 41 1_555 115.5 A CYS 20 A SG CYS 20 1_555 A ZN 201 B ZN ZN 1_555 A CYS 41 A SG CYS 41 1_555 98.4 A CYS 17 A SG CYS 17 1_555 A ZN 201 B ZN ZN 1_555 A CYS 44 A SG CYS 44 1_555 109.6 A CYS 20 A SG CYS 20 1_555 A ZN 201 B ZN ZN 1_555 A CYS 44 A SG CYS 44 1_555 117.8 A CYS 41 A SG CYS 41 1_555 A ZN 201 B ZN ZN 1_555 A CYS 44 A SG CYS 44 1_555 100.5 A CYS 33 A SG CYS 33 1_555 A ZN 401 C ZN ZN 1_555 A CYS 36 A SG CYS 36 1_555 96.7 A CYS 33 A SG CYS 33 1_555 A ZN 401 C ZN ZN 1_555 A CYS 69 A SG CYS 69 1_555 118.7 A CYS 36 A SG CYS 36 1_555 A ZN 401 C ZN ZN 1_555 A CYS 69 A SG CYS 69 1_555 118.9 A CYS 33 A SG CYS 33 1_555 A ZN 401 C ZN ZN 1_555 A CYS 72 A SG CYS 72 1_555 118.9 A CYS 36 A SG CYS 36 1_555 A ZN 401 C ZN ZN 1_555 A CYS 72 A SG CYS 72 1_555 107.1 A CYS 69 A SG CYS 69 1_555 A ZN 401 C ZN ZN 1_555 A CYS 72 A SG CYS 72 1_555 97.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ARG 31 A N ARG 31 A O PHE 40 A O PHE 40 A N VAL 49 A N VAL 49 A O VAL 66 A O VAL 66 1 A TYR 9 -39.31 143.25 1 A ASN 13 -45.76 150.91 1 A ARG 30 -61.53 99.70 1 A ASN 35 -85.69 -74.36 1 A CYS 45 -91.80 36.22 1 A SER 53 -106.71 40.68 1 A GLU 60 -90.44 -61.18 1 A GLN 62 -120.11 -56.96 1 A ARG 63 -103.81 42.18 1 A ASN 73 -37.67 -38.50 2 A SER 5 -41.57 158.22 2 A ARG 30 -55.57 97.64 2 A ASN 35 -84.84 -74.97 2 A CYS 45 -92.84 44.56 2 A SER 53 -92.56 42.72 2 A ASN 73 -36.11 -38.72 2 A PRO 81 -69.75 90.82 2 A SER 82 -105.84 42.52 3 A THR 11 -174.33 121.16 3 A ASN 12 -172.22 128.74 3 A ASN 13 -40.95 104.05 3 A SER 21 38.87 42.03 3 A THR 23 -38.79 147.43 3 A ASN 35 -85.64 -74.96 3 A THR 57 -57.81 103.69 3 A ASN 73 -37.48 -39.14 3 A PRO 81 -69.86 9.67 4 A SER 5 -98.60 40.64 4 A ASN 12 -134.39 -39.39 4 A PHE 14 -47.98 172.98 4 A CYS 17 -39.78 158.27 4 A SER 21 36.38 30.27 4 A SER 25 -129.01 -68.47 4 A VAL 26 -134.79 -51.60 4 A LEU 27 -87.94 38.12 4 A LYS 28 -173.49 125.29 4 A ASN 35 -85.90 -75.34 4 A CYS 45 -93.64 42.58 4 A THR 57 -39.26 129.23 4 A PRO 59 -69.76 1.28 5 A PRO 10 -69.74 -175.86 5 A CYS 17 -46.30 154.55 5 A SER 21 38.74 55.02 5 A SER 25 -134.90 -61.40 5 A LYS 29 -33.59 130.23 5 A ARG 30 -55.85 91.62 5 A ASN 35 -85.98 -75.61 5 A CYS 45 -92.44 36.43 5 A SER 53 -102.37 63.12 5 A ARG 63 71.96 40.00 5 A ASN 73 -38.00 -38.23 5 A PRO 81 -69.72 3.55 5 A SER 82 -32.80 131.17 6 A CYS 17 -49.09 161.20 6 A ASN 35 -86.60 -74.96 6 A CYS 45 -92.14 41.80 6 A PRO 59 -69.77 0.45 6 A SER 77 -83.82 48.22 6 A SER 79 -55.92 176.14 7 A SER 2 37.69 42.22 7 A SER 21 33.79 54.40 7 A VAL 26 -49.04 -18.78 7 A ARG 30 -55.10 109.47 7 A ASN 35 -85.48 -73.91 7 A CYS 45 -94.62 34.47 7 A SER 53 -93.35 41.20 7 A SER 77 -83.45 48.56 8 A PRO 10 -69.73 -171.94 8 A ASN 13 -173.23 130.08 8 A SER 25 -107.09 -67.84 8 A VAL 26 -133.91 -56.76 8 A ARG 30 -44.44 98.84 8 A ASN 35 -85.89 -75.84 8 A CYS 45 -90.98 42.57 8 A LYS 51 -91.39 30.39 8 A ALA 58 -36.49 144.41 8 A PRO 59 -69.74 0.62 8 A ASN 73 -39.59 -39.53 8 A SER 77 -90.54 45.66 9 A SER 5 -97.49 41.18 9 A SER 6 -40.24 102.34 9 A PRO 10 -69.79 -175.60 9 A LYS 28 -65.32 89.74 9 A ARG 30 -49.16 108.27 9 A ASN 35 -87.98 -75.11 9 A CYS 45 -93.65 36.26 9 A SER 53 -109.01 56.73 9 A PRO 59 -69.77 1.07 9 A ARG 63 37.11 39.56 10 A SER 2 -60.07 96.48 10 A PHE 14 -57.01 -179.05 10 A CYS 17 -38.83 146.67 10 A SER 21 74.74 36.51 10 A SER 25 -129.94 -67.73 10 A VAL 26 -130.31 -69.43 10 A ASN 35 -91.00 -75.08 10 A CYS 45 -95.66 43.96 10 A SER 52 -85.76 34.00 10 A SER 53 -132.29 -52.58 10 A THR 57 -44.59 158.81 10 A ARG 63 -93.48 39.66 10 A ASN 73 -37.89 -38.30 11 A PRO 10 -69.80 5.71 11 A THR 11 -33.35 143.74 11 A CYS 17 -44.30 152.09 11 A SER 25 -114.28 -76.09 11 A VAL 26 -132.72 -30.11 11 A ARG 30 -65.10 91.86 11 A ASN 35 -85.45 -75.11 11 A CYS 45 -92.42 42.34 11 A ALA 56 -34.14 111.00 11 A ALA 58 -174.65 144.97 11 A ALA 61 -52.89 97.26 11 A GLN 62 -132.78 -53.83 11 A SER 79 -41.09 104.49 11 A SER 83 -173.52 108.28 12 A TYR 9 -37.91 106.68 12 A PHE 24 -97.82 43.34 12 A VAL 26 -64.77 76.72 12 A LEU 27 32.94 41.97 12 A ASN 35 -87.39 -72.55 12 A CYS 45 -95.49 41.72 12 A LYS 51 -87.36 40.71 12 A ALA 56 -36.98 99.83 12 A ASN 73 -34.21 -35.80 12 A LYS 78 -34.61 112.34 13 A ARG 8 -172.08 144.69 13 A LEU 27 -86.67 34.29 13 A ASN 35 -87.38 -75.01 13 A CYS 45 -90.51 41.13 13 A LYS 51 -92.16 40.31 13 A SER 53 -102.21 77.72 13 A MET 54 -130.82 -58.64 13 A ALA 56 -165.74 112.16 13 A ALA 58 -48.14 165.05 13 A PRO 59 -69.73 0.55 13 A GLU 64 -36.87 145.97 13 A LYS 78 -95.74 44.04 13 A SER 82 -66.42 91.96 13 A SER 83 -121.92 -51.81 14 A ASN 12 -174.36 149.03 14 A ASN 13 -37.52 145.36 14 A SER 21 71.85 42.50 14 A LYS 29 -34.13 119.47 14 A ARG 30 -39.94 97.55 14 A ASN 35 -87.48 -74.74 14 A CYS 45 -88.56 45.19 14 A SER 53 -96.43 50.83 14 A ALA 58 -45.48 157.31 14 A ARG 63 35.14 38.26 14 A SER 79 -69.32 88.43 15 A SER 2 -168.79 116.57 15 A PRO 10 -69.75 96.41 15 A THR 23 -38.70 148.41 15 A ARG 30 -65.99 99.85 15 A ASN 35 -86.66 -73.45 15 A CYS 45 -96.29 40.26 15 A LYS 51 -86.42 33.48 15 A PRO 59 -69.73 2.98 15 A ALA 61 -67.93 85.06 15 A GLN 62 -127.64 -50.52 15 A ASN 73 -37.06 -39.60 15 A SER 77 -89.91 40.87 15 A LYS 78 -92.11 -61.04 15 A SER 79 39.07 38.90 16 A PRO 10 -69.78 83.32 16 A ASN 12 -132.61 -43.20 16 A SER 25 -111.00 -70.29 16 A VAL 26 -132.60 -31.71 16 A ARG 30 -58.45 87.77 16 A ASN 35 -86.54 -75.21 16 A CYS 45 -92.75 44.42 16 A SER 53 -99.29 52.22 16 A PRO 59 -69.80 0.07 16 A ASN 73 -37.50 -38.99 16 A SER 77 -105.56 46.56 17 A PRO 10 -69.76 6.72 17 A THR 11 -30.83 124.33 17 A ASN 12 -132.32 -44.48 17 A ASN 13 -174.82 136.28 17 A ASN 35 -87.61 -75.40 17 A CYS 45 -94.42 40.16 17 A ASN 73 -34.73 -39.94 17 A SER 77 -103.68 72.78 18 A SER 3 -54.56 171.78 18 A ASN 12 -127.48 -54.49 18 A ASN 13 -174.23 -177.07 18 A SER 25 -133.22 -54.36 18 A VAL 26 -65.56 81.70 18 A LEU 27 36.81 44.22 18 A ARG 30 -51.01 109.02 18 A ASN 35 -87.92 -75.42 18 A CYS 45 -90.43 42.41 18 A MET 54 -68.54 95.63 18 A ALA 58 -48.24 164.44 18 A PRO 59 -69.78 0.93 18 A GLN 62 -120.18 -50.00 18 A ASN 73 -35.92 -37.68 18 A PRO 81 -69.77 99.52 19 A SER 5 -170.00 127.90 19 A PRO 10 -69.77 -170.35 19 A CYS 17 -41.22 160.58 19 A SER 21 37.13 50.51 19 A SER 25 -109.47 -75.15 19 A VAL 26 -130.84 -32.39 19 A ARG 30 -59.40 94.48 19 A ASN 35 -87.95 -75.59 19 A CYS 45 -95.24 35.92 19 A ARG 63 -116.42 58.31 19 A SER 71 -39.72 -35.19 19 A SER 77 -86.48 44.63 19 A PRO 81 -69.69 2.80 20 A CYS 17 -40.47 161.70 20 A THR 23 -37.04 147.10 20 A PHE 24 -99.21 59.48 20 A VAL 26 -63.16 79.34 20 A LEU 27 35.48 49.46 20 A ARG 30 -48.26 105.92 20 A ASN 35 -85.43 -75.20 20 A CYS 45 -95.49 37.27 20 A LYS 51 -83.09 39.66 20 A THR 57 -41.91 109.01 20 A PRO 59 -69.69 2.69 20 A GLU 60 -130.03 -36.36 20 A ALA 61 -80.05 43.58 20 A SER 77 -81.18 43.69 20 A SER 79 -91.18 49.21 20 A PRO 81 -69.78 99.32 Solution structure of the FYVE domain from human FYVE domain containing 27 isoform b protein 1 N N 2 N N 2 N N A CYS 69 A CYS 69 HELX_P A LYS 78 A LYS 78 1 1 10 metalc 2.338 A CYS 17 A SG CYS 17 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.334 A CYS 20 A SG CYS 20 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.331 A CYS 33 A SG CYS 33 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.326 A CYS 36 A SG CYS 36 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.359 A CYS 41 A SG CYS 41 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.337 A CYS 44 A SG CYS 44 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.326 A CYS 69 A SG CYS 69 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.320 A CYS 72 A SG CYS 72 1_555 A ZN 401 C ZN ZN 1_555 LIPID BINDING PROTEIN FYVE domain, phosphoinositide binding, zinc binding, structural genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, LIPID BINDING PROTEIN Q5T4F4_HUMAN UNP 1 341 Q5T4F4 RYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSK 341 411 1X4U 8 78 Q5T4F4 A 1 8 78 1 cloning artifact GLY 1 1X4U A Q5T4F4 UNP 1 1 cloning artifact SER 2 1X4U A Q5T4F4 UNP 2 1 cloning artifact SER 3 1X4U A Q5T4F4 UNP 3 1 cloning artifact GLY 4 1X4U A Q5T4F4 UNP 4 1 cloning artifact SER 5 1X4U A Q5T4F4 UNP 5 1 cloning artifact SER 6 1X4U A Q5T4F4 UNP 6 1 cloning artifact GLY 7 1X4U A Q5T4F4 UNP 7 1 cloning artifact SER 79 1X4U A Q5T4F4 UNP 79 1 cloning artifact GLY 80 1X4U A Q5T4F4 UNP 80 1 cloning artifact PRO 81 1X4U A Q5T4F4 UNP 81 1 cloning artifact SER 82 1X4U A Q5T4F4 UNP 82 1 cloning artifact SER 83 1X4U A Q5T4F4 UNP 83 1 cloning artifact GLY 84 1X4U A Q5T4F4 UNP 84 2 2 anti-parallel anti-parallel A ARG 31 A ARG 31 A SER 32 A SER 32 A SER 39 A SER 39 A PHE 40 A PHE 40 A PHE 47 A PHE 47 A VAL 49 A VAL 49 A VAL 66 A VAL 66 A VAL 68 A VAL 68 BINDING SITE FOR RESIDUE ZN A 201 A ZN 201 Software 4 BINDING SITE FOR RESIDUE ZN A 401 A ZN 401 Software 5 A CYS 17 A CYS 17 4 1_555 A CYS 20 A CYS 20 4 1_555 A CYS 41 A CYS 41 4 1_555 A CYS 44 A CYS 44 4 1_555 A CYS 33 A CYS 33 5 1_555 A CYS 36 A CYS 36 5 1_555 A PHE 40 A PHE 40 5 1_555 A CYS 69 A CYS 69 5 1_555 A CYS 72 A CYS 72 5 1_555