0.031211 0.000000 0.000000 0.000000 0.015748 0.000000 0.000000 0.000000 0.012089 0.00000 0.00000 0.00000 Wu, H. Jiang, H. Luo, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 32.040 63.500 82.720 C10 H10 N2 O2 190.199 4-(2-nitroethyl)-1~{H}-indole non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H15 N5 O11 P2 443.201 n GUANOSINE-5'-DIPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N N Y 3 N C Y 4 N C Y 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N C Y 10 N C N 11 N C Y 12 N N N 13 N O N 14 N O N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N N N 26 S C N 27 N C N 28 N O N 29 N C N 30 N O N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N C N 44 N C N 45 N N N 46 N C N 47 N N N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N N N 66 S C N 67 N C N 68 N O N 69 N C N 70 N C N 71 N O N 72 N N N 73 N O N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N N N 83 S C N 84 N C N 85 N O N 86 N C N 87 N C N 88 N O N 89 N O N 90 N O N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N N N 99 R C N 100 N C N 101 N O N 102 N C N 103 N S N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N P N 113 N O N 114 N O N 115 N O N 116 N O N 117 N P N 118 N O N 119 N O N 120 N O N 121 N C N 122 R C N 123 N O N 124 S C N 125 N O N 126 R C N 127 N O N 128 R C Y 129 N N Y 130 N C Y 131 N N Y 132 N C N 133 N C N 134 N O N 135 N N N 136 N C N 137 N N N 138 N N Y 139 N C N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N N N 156 S C N 157 N C N 158 N O N 159 N C N 160 N C N 161 N C N 162 N O N 163 N N N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 N C N 180 N C N 181 N C N 182 N O N 183 N O N 184 N O N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N N N 195 N C N 196 N C N 197 N O N 198 N O N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N N N 205 S C N 206 N C N 207 N O N 208 N C Y 209 N C Y 210 N N Y 211 N C Y 212 N C Y 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N O N 226 N H N 227 N H N 228 N N N 229 S C N 230 N C N 231 N O N 232 S C N 233 N C N 234 N C N 235 N C N 236 N O N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C N 255 N C N 256 N C N 257 N C N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N N N 273 S C N 274 N C N 275 N O N 276 N C N 277 N C N 278 N C N 279 N C N 280 N N N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N N N 298 S C N 299 N C N 300 N O N 301 N C N 302 N C N 303 N S N 304 N C N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N MG N 318 N N N 319 S C N 320 N C N 321 N O N 322 N C Y 323 N C Y 324 N C Y 325 N C Y 326 N C Y 327 N C Y 328 N C N 329 N O N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N N N 342 S C N 343 N C N 344 N O N 345 N C N 346 N C N 347 N C N 348 N O N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N O N 364 N O N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 R C N 377 N O N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N N N 390 S C N 391 N C N 392 N O N 393 N C Y 394 N C Y 395 N C Y 396 N C Y 397 N N Y 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C N 403 N O N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C Y 421 N C Y 422 N C Y 423 N C Y 424 N C Y 425 N C Y 426 N C N 427 N O N 428 N O N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N N N 441 S C N 442 N C N 443 N O N 444 N C N 445 N C N 446 N C N 447 N O N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 1 N sing N 2 N doub N 3 N sing N 4 N sing Y 5 N doub Y 6 N sing Y 7 N sing N 8 N sing Y 9 N doub Y 10 N doub Y 11 N sing Y 12 N sing Y 13 N sing Y 14 N doub Y 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N doub N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N doub N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N doub N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing Y 137 N sing Y 138 N sing Y 139 N doub N 140 N sing Y 141 N sing N 142 N sing Y 143 N doub N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing Y 210 N sing Y 211 N doub Y 212 N doub N 213 N sing Y 214 N sing N 215 N sing Y 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing Y 318 N doub Y 319 N sing Y 320 N sing N 321 N sing Y 322 N doub N 323 N sing Y 324 N doub N 325 N sing Y 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N doub N 383 N sing N 384 N sing N 385 N sing N 386 N sing Y 387 N doub Y 388 N sing Y 389 N sing N 390 N sing Y 391 N doub Y 392 N sing Y 393 N sing N 394 N sing Y 395 N sing Y 396 N doub N 397 N sing Y 398 N doub N 399 N sing Y 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N doub N 411 N sing N 412 N sing N 413 N sing N 414 N sing Y 415 N doub Y 416 N sing Y 417 N sing N 418 N sing Y 419 N doub N 420 N sing Y 421 N doub N 422 N sing Y 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N doub N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing US J.Am.Chem.Soc. JACSAT 1520-5126 10.1021/jacs.5c20067 41837560 Discovering Targetable Conformation of RhoA Mutant by Integrating Native Mass Spectrometry, Ultraviolet Photodissociation, and X-ray Diffraction. 2026 0009-0000-7111-3131 0009-0002-8920-9355 0000-0003-0763-5407 0000-0001-6826-1993 0000-0001-6518-4152 0000-0002-1549-5945 0000-0001-6684-9187 0000-0002-8118-7019 0000-0003-3864-8382 10.2210/pdb9vng/pdb pdb_00009vng 100 1 N PIXEL 2024-04-07 DECTRIS EIGER2 S 9M SINGLE WAVELENGTH M x-ray 1 0.979183 1.0 BL02U1 SSRF 0.979183 SYNCHROTRON SSRF BEAMLINE BL02U1 Y42C mutant 20464.479 Transforming protein RhoA 3.6.5.2 Y42C 1 man polymer 443.201 GUANOSINE-5'-DIPHOSPHATE 1 syn non-polymer 190.199 4-(2-nitroethyl)-1~{H}-indole 1 syn non-polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 120 nat water Rho cDNA clone 12,h12 no no GMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENCVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDV ILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMEC SAKTKDGVREVFEMATRAALQA GMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENCVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDV ILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMEC SAKTKDGVREVFEMATRAALQA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 1 182 RHOA, ARH12, ARHA, RHO12 9606 Homo sapiens 562 Escherichia coli Biological sequence 1 2.06 40.17 VAPOR DIFFUSION, SITTING DROP 4.6 0.2 M Ammonium acetate, 0.1 M Sodium acetate trihydrate pH 4.6, 30% w/v Polyethylene glycol 4000 289.15 repository Initial release 1 0 2026-04-01 China National Natural Science Foundation of China (NSFC) cluo@simm.ac.cn 0000-0003-3864-8382 Cheng Luo principal investigator/group leader N PDBJ N PDBC 2025-06-30 REL REL GDP GDP SUBJECT OF INVESTIGATION A1D9L A1D9L SUBJECT OF INVESTIGATION MG MG SUBJECT OF INVESTIGATION GDP GUANOSINE-5'-DIPHOSPHATE A1D9L 4-(2-nitroethyl)-1~{H}-indole MG MAGNESIUM ION HOH water Y Y 1FTN PDB experimental model A A1D9L 202 Covalent chemical modification C10 C A1D9L A CYS 42 CYS SG A CYS 43 1_555 A1D9L 1 1_555 None GDP 201 2 GDP GDP 201 A LIG 202 3 A1D9L A1D9L 202 A MG 1 4 MG MG 203 A HOH 147 5 HOH HOH 301 A HOH 75 5 HOH HOH 302 A HOH 142 5 HOH HOH 303 A HOH 85 5 HOH HOH 304 A HOH 51 5 HOH HOH 305 A HOH 77 5 HOH HOH 306 A HOH 65 5 HOH HOH 307 A HOH 179 5 HOH HOH 308 A HOH 146 5 HOH HOH 309 A HOH 22 5 HOH HOH 310 A HOH 13 5 HOH HOH 311 A HOH 27 5 HOH HOH 312 A HOH 39 5 HOH HOH 313 A HOH 18 5 HOH HOH 314 A HOH 150 5 HOH HOH 315 A HOH 190 5 HOH HOH 316 A HOH 53 5 HOH HOH 317 A HOH 30 5 HOH HOH 318 A HOH 9 5 HOH HOH 319 A HOH 177 5 HOH HOH 320 A HOH 176 5 HOH HOH 321 A HOH 2 5 HOH HOH 322 A HOH 61 5 HOH HOH 323 A HOH 50 5 HOH HOH 324 A HOH 33 5 HOH HOH 325 A HOH 17 5 HOH HOH 326 A HOH 86 5 HOH HOH 327 A HOH 73 5 HOH HOH 328 A HOH 1 5 HOH HOH 329 A HOH 35 5 HOH HOH 330 A HOH 44 5 HOH HOH 331 A HOH 11 5 HOH HOH 332 A HOH 55 5 HOH HOH 333 A HOH 3 5 HOH HOH 334 A HOH 113 5 HOH HOH 335 A HOH 58 5 HOH HOH 336 A HOH 8 5 HOH HOH 337 A HOH 214 5 HOH HOH 338 A HOH 96 5 HOH HOH 339 A HOH 56 5 HOH HOH 340 A HOH 41 5 HOH HOH 341 A HOH 191 5 HOH HOH 342 A HOH 59 5 HOH HOH 343 A HOH 42 5 HOH HOH 344 A HOH 40 5 HOH HOH 345 A HOH 153 5 HOH HOH 346 A HOH 19 5 HOH HOH 347 A HOH 5 5 HOH HOH 348 A HOH 60 5 HOH HOH 349 A HOH 23 5 HOH HOH 350 A HOH 38 5 HOH HOH 351 A HOH 37 5 HOH HOH 352 A HOH 10 5 HOH HOH 353 A HOH 244 5 HOH HOH 354 A HOH 148 5 HOH HOH 355 A HOH 82 5 HOH HOH 356 A HOH 94 5 HOH HOH 357 A HOH 7 5 HOH HOH 358 A HOH 6 5 HOH HOH 359 A HOH 24 5 HOH HOH 360 A HOH 21 5 HOH HOH 361 A HOH 184 5 HOH HOH 362 A HOH 12 5 HOH HOH 363 A HOH 25 5 HOH HOH 364 A HOH 91 5 HOH HOH 365 A HOH 66 5 HOH HOH 366 A HOH 4 5 HOH HOH 367 A HOH 145 5 HOH HOH 368 A HOH 34 5 HOH HOH 369 A HOH 88 5 HOH HOH 370 A HOH 28 5 HOH HOH 371 A HOH 193 5 HOH HOH 372 A HOH 171 5 HOH HOH 373 A HOH 97 5 HOH HOH 374 A HOH 57 5 HOH HOH 375 A HOH 271 5 HOH HOH 376 A HOH 252 5 HOH HOH 377 A HOH 32 5 HOH HOH 378 A HOH 291 5 HOH HOH 379 A HOH 46 5 HOH HOH 380 A HOH 31 5 HOH HOH 381 A HOH 15 5 HOH HOH 382 A HOH 69 5 HOH HOH 383 A HOH 43 5 HOH HOH 384 A HOH 14 5 HOH HOH 385 A HOH 126 5 HOH HOH 386 A HOH 45 5 HOH HOH 387 A HOH 16 5 HOH HOH 388 A HOH 26 5 HOH HOH 389 A HOH 152 5 HOH HOH 390 A HOH 79 5 HOH HOH 391 A HOH 52 5 HOH HOH 392 A HOH 131 5 HOH HOH 393 A HOH 212 5 HOH HOH 394 A HOH 36 5 HOH HOH 395 A HOH 203 5 HOH HOH 396 A HOH 262 5 HOH HOH 397 A HOH 29 5 HOH HOH 398 A HOH 219 5 HOH HOH 399 A HOH 256 5 HOH HOH 400 A HOH 111 5 HOH HOH 401 A HOH 114 5 HOH HOH 402 A HOH 178 5 HOH HOH 403 A HOH 119 5 HOH HOH 404 A HOH 241 5 HOH HOH 405 A HOH 240 5 HOH HOH 406 A HOH 167 5 HOH HOH 407 A HOH 95 5 HOH HOH 408 A HOH 255 5 HOH HOH 409 A HOH 173 5 HOH HOH 410 A HOH 158 5 HOH HOH 411 A HOH 205 5 HOH HOH 412 A HOH 259 5 HOH HOH 413 A HOH 223 5 HOH HOH 414 A HOH 63 5 HOH HOH 415 A HOH 74 5 HOH HOH 416 A HOH 188 5 HOH HOH 417 A HOH 68 5 HOH HOH 418 A HOH 273 5 HOH HOH 419 A HOH 144 5 HOH HOH 420 A n 1 0 A n 2 1 A n 3 2 A ALA 3 n 4 ALA 3 A ILE 4 n 5 ILE 4 A ARG 5 n 6 ARG 5 A LYS 6 n 7 LYS 6 A LYS 7 n 8 LYS 7 A LEU 8 n 9 LEU 8 A VAL 9 n 10 VAL 9 A ILE 10 n 11 ILE 10 A VAL 11 n 12 VAL 11 A GLY 12 n 13 GLY 12 A ASP 13 n 14 ASP 13 A GLY 14 n 15 GLY 14 A ALA 15 n 16 ALA 15 A CYS 16 n 17 CYS 16 A GLY 17 n 18 GLY 17 A LYS 18 n 19 LYS 18 A THR 19 n 20 THR 19 A CYS 20 n 21 CYS 20 A LEU 21 n 22 LEU 21 A LEU 22 n 23 LEU 22 A ILE 23 n 24 ILE 23 A VAL 24 n 25 VAL 24 A PHE 25 n 26 PHE 25 A SER 26 n 27 SER 26 A LYS 27 n 28 LYS 27 A ASP 28 n 29 ASP 28 A GLN 29 n 30 GLN 29 A PHE 30 n 31 PHE 30 A PRO 31 n 32 PRO 31 A GLU 32 n 33 GLU 32 A VAL 33 n 34 VAL 33 A TYR 34 n 35 TYR 34 A VAL 35 n 36 VAL 35 A PRO 36 n 37 PRO 36 A THR 37 n 38 THR 37 A VAL 38 n 39 VAL 38 A PHE 39 n 40 PHE 39 A GLU 40 n 41 GLU 40 A ASN 41 n 42 ASN 41 A CYS 42 n 43 CYS 42 A VAL 43 n 44 VAL 43 A ALA 44 n 45 ALA 44 A ASP 45 n 46 ASP 45 A ILE 46 n 47 ILE 46 A GLU 47 n 48 GLU 47 A VAL 48 n 49 VAL 48 A ASP 49 n 50 ASP 49 A GLY 50 n 51 GLY 50 A LYS 51 n 52 LYS 51 A GLN 52 n 53 GLN 52 A VAL 53 n 54 VAL 53 A GLU 54 n 55 GLU 54 A LEU 55 n 56 LEU 55 A ALA 56 n 57 ALA 56 A LEU 57 n 58 LEU 57 A TRP 58 n 59 TRP 58 A ASP 59 n 60 ASP 59 A THR 60 n 61 THR 60 A ALA 61 n 62 ALA 61 A GLY 62 n 63 GLY 62 A n 64 63 A n 65 64 A n 66 65 A n 67 66 A n 68 67 A n 69 68 A LEU 69 n 70 LEU 69 A ARG 70 n 71 ARG 70 A PRO 71 n 72 PRO 71 A LEU 72 n 73 LEU 72 A SER 73 n 74 SER 73 A TYR 74 n 75 TYR 74 A PRO 75 n 76 PRO 75 A ASP 76 n 77 ASP 76 A THR 77 n 78 THR 77 A ASP 78 n 79 ASP 78 A VAL 79 n 80 VAL 79 A ILE 80 n 81 ILE 80 A LEU 81 n 82 LEU 81 A MET 82 n 83 MET 82 A CYS 83 n 84 CYS 83 A PHE 84 n 85 PHE 84 A SER 85 n 86 SER 85 A ILE 86 n 87 ILE 86 A ASP 87 n 88 ASP 87 A SER 88 n 89 SER 88 A PRO 89 n 90 PRO 89 A ASP 90 n 91 ASP 90 A SER 91 n 92 SER 91 A LEU 92 n 93 LEU 92 A GLU 93 n 94 GLU 93 A ASN 94 n 95 ASN 94 A ILE 95 n 96 ILE 95 A PRO 96 n 97 PRO 96 A GLU 97 n 98 GLU 97 A LYS 98 n 99 LYS 98 A TRP 99 n 100 TRP 99 A THR 100 n 101 THR 100 A PRO 101 n 102 PRO 101 A GLU 102 n 103 GLU 102 A VAL 103 n 104 VAL 103 A LYS 104 n 105 LYS 104 A HIS 105 n 106 HIS 105 A PHE 106 n 107 PHE 106 A CYS 107 n 108 CYS 107 A PRO 108 n 109 PRO 108 A ASN 109 n 110 ASN 109 A VAL 110 n 111 VAL 110 A PRO 111 n 112 PRO 111 A ILE 112 n 113 ILE 112 A ILE 113 n 114 ILE 113 A LEU 114 n 115 LEU 114 A VAL 115 n 116 VAL 115 A GLY 116 n 117 GLY 116 A ASN 117 n 118 ASN 117 A LYS 118 n 119 LYS 118 A LYS 119 n 120 LYS 119 A ASP 120 n 121 ASP 120 A LEU 121 n 122 LEU 121 A ARG 122 n 123 ARG 122 A ASN 123 n 124 ASN 123 A ASP 124 n 125 ASP 124 A GLU 125 n 126 GLU 125 A HIS 126 n 127 HIS 126 A THR 127 n 128 THR 127 A ARG 128 n 129 ARG 128 A ARG 129 n 130 ARG 129 A GLU 130 n 131 GLU 130 A LEU 131 n 132 LEU 131 A ALA 132 n 133 ALA 132 A LYS 133 n 134 LYS 133 A MET 134 n 135 MET 134 A LYS 135 n 136 LYS 135 A GLN 136 n 137 GLN 136 A GLU 137 n 138 GLU 137 A PRO 138 n 139 PRO 138 A VAL 139 n 140 VAL 139 A LYS 140 n 141 LYS 140 A PRO 141 n 142 PRO 141 A GLU 142 n 143 GLU 142 A GLU 143 n 144 GLU 143 A GLY 144 n 145 GLY 144 A ARG 145 n 146 ARG 145 A ASP 146 n 147 ASP 146 A MET 147 n 148 MET 147 A ALA 148 n 149 ALA 148 A ASN 149 n 150 ASN 149 A ARG 150 n 151 ARG 150 A ILE 151 n 152 ILE 151 A GLY 152 n 153 GLY 152 A ALA 153 n 154 ALA 153 A PHE 154 n 155 PHE 154 A GLY 155 n 156 GLY 155 A TYR 156 n 157 TYR 156 A MET 157 n 158 MET 157 A GLU 158 n 159 GLU 158 A CYS 159 n 160 CYS 159 A SER 160 n 161 SER 160 A ALA 161 n 162 ALA 161 A LYS 162 n 163 LYS 162 A THR 163 n 164 THR 163 A LYS 164 n 165 LYS 164 A ASP 165 n 166 ASP 165 A GLY 166 n 167 GLY 166 A VAL 167 n 168 VAL 167 A ARG 168 n 169 ARG 168 A GLU 169 n 170 GLU 169 A VAL 170 n 171 VAL 170 A PHE 171 n 172 PHE 171 A GLU 172 n 173 GLU 172 A MET 173 n 174 MET 173 A ALA 174 n 175 ALA 174 A THR 175 n 176 THR 175 A ARG 176 n 177 ARG 176 A ALA 177 n 178 ALA 177 A ALA 178 n 179 ALA 178 A LEU 179 n 180 LEU 179 A GLN 180 n 181 GLN 180 A n 182 181 A author_and_software_defined_assembly PISA 1 monomeric none 850 -19 9040 A THR 19 A OG1 THR 20 1_555 A MG 203 D MG MG 1_555 A PRO 36 A O PRO 37 1_555 88.9 A THR 19 A OG1 THR 20 1_555 A MG 203 D MG MG 1_555 A GDP 201 B O1B GDP 1_555 88.6 A PRO 36 A O PRO 37 1_555 A MG 203 D MG MG 1_555 A GDP 201 B O1B GDP 1_555 174.6 A THR 19 A OG1 THR 20 1_555 A MG 203 D MG MG 1_555 A HOH 322 E O HOH 1_555 175.0 A PRO 36 A O PRO 37 1_555 A MG 203 D MG MG 1_555 A HOH 322 E O HOH 1_555 88.2 A GDP 201 B O1B GDP 1_555 A MG 203 D MG MG 1_555 A HOH 322 E O HOH 1_555 94.6 A THR 19 A OG1 THR 20 1_555 A MG 203 D MG MG 1_555 A HOH 329 E O HOH 1_555 83.5 A PRO 36 A O PRO 37 1_555 A MG 203 D MG MG 1_555 A HOH 329 E O HOH 1_555 93.3 A GDP 201 B O1B GDP 1_555 A MG 203 D MG MG 1_555 A HOH 329 E O HOH 1_555 91.2 A HOH 322 E O HOH 1_555 A MG 203 D MG MG 1_555 A HOH 329 E O HOH 1_555 92.6 A THR 19 A OG1 THR 20 1_555 A MG 203 D MG MG 1_555 A HOH 334 E O HOH 1_555 88.5 A PRO 36 A O PRO 37 1_555 A MG 203 D MG MG 1_555 A HOH 334 E O HOH 1_555 86.1 A GDP 201 B O1B GDP 1_555 A MG 203 D MG MG 1_555 A HOH 334 E O HOH 1_555 89.0 A HOH 322 E O HOH 1_555 A MG 203 D MG MG 1_555 A HOH 334 E O HOH 1_555 95.3 A HOH 329 E O HOH 1_555 A MG 203 D MG MG 1_555 A HOH 334 E O HOH 1_555 172.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 44 A N ALA 45 A O LEU 55 A O LEU 56 A O GLU 54 A O GLU 55 A N ILE 4 A N ILE 5 A N VAL 11 A N VAL 12 A O CYS 83 A O CYS 84 A N PHE 84 A N PHE 85 A O ASN 117 A O ASN 118 A N GLY 116 A N GLY 117 A O MET 157 A O MET 158 1 A GLY 0 A GLY 1 1 Y 1 A MET 1 A MET 2 1 Y 1 A ALA 2 A ALA 3 1 Y 1 A GLN 63 A GLN 64 1 Y 1 A GLU 64 A GLU 65 1 Y 1 A ASP 65 A ASP 66 1 Y 1 A TYR 66 A TYR 67 1 Y 1 A ASP 67 A ASP 68 1 Y 1 A ARG 68 A ARG 69 1 Y 1 A ALA 181 A ALA 182 1 Y 1 A A O O HOH HOH 305 339 2.19 1 A LYS 98 -129.29 -53.91 1 A LYS 164 79.21 -4.81 0.2206 0.1892 0.1907 1.43 34.66 1559 31604 4.93 98.77 0.15 1 THROUGHOUT 1.36 MOLECULAR REPLACEMENT 20.81 0.90 1.10 ML FLAT BULK SOLVENT MODEL 1.43 34.66 120 1513 43 0 1350 0.006 1427 0.993 1936 18.002 541 0.089 214 0.007 247 0.2759 0.2453 1.48 137 2573 95.00 0.2107 0.2028 1.53 139 2669 98.00 0.1949 0.1827 1.59 151 2647 98.00 0.2568 0.1856 1.66 155 2660 99.00 0.2661 0.1918 1.75 117 2719 99.00 0.1919 0.1798 1.86 141 2725 99.00 0.2198 0.1834 2.00 141 2757 99.00 0.2193 0.1890 2.20 128 2742 100.00 0.2510 0.1936 2.52 131 2799 100.00 0.1930 0.2029 3.18 156 2820 100.00 0.2216 0.1787 34.66 163 2934 100.00 1.43 34.66 9VNG 31655 0.058 1 25.6 12.1 99.0 0.679 1.43 1.47 2169 1 refinement PHENIX (1.21.1_5286: ???) data reduction xia2 data scaling Aimless phasing PHENIX data extraction PDB_EXTRACT N Small GTPase RhoA Y42C mutant in complex with covalent inhibitor 1 N N 2 N N 3 N N 4 N N 5 N N A GLY 17 A GLY 18 HELX_P A ASP 28 A ASP 29 1 AA1 12 A LEU 69 A LEU 70 HELX_P A TYR 74 A TYR 75 5 AA2 6 A SER 88 A SER 89 HELX_P A LYS 98 A LYS 99 1 AA3 11 A LYS 98 A LYS 99 HELX_P A CYS 107 A CYS 108 1 AA4 10 A LYS 118 A LYS 119 HELX_P A ARG 122 A ARG 123 5 AA5 5 A ASP 124 A ASP 125 HELX_P A MET 134 A MET 135 1 AA6 11 A LYS 140 A LYS 141 HELX_P A GLY 152 A GLY 153 1 AA7 13 A GLY 166 A GLY 167 HELX_P A LEU 179 A LEU 180 1 AA8 14 covale 1.768 none A CYS 42 A SG CYS 43 1_555 A A1D9L 202 C C10 A1D9L 1_555 metalc 2.158 A THR 19 A OG1 THR 20 1_555 A MG 203 D MG MG 1_555 metalc 2.073 A PRO 36 A O PRO 37 1_555 A MG 203 D MG MG 1_555 metalc 2.117 A GDP 201 B O1B GDP 1_555 A MG 203 D MG MG 1_555 metalc 1.975 A MG 203 D MG MG 1_555 A HOH 322 E O HOH 1_555 metalc 2.125 A MG 203 D MG MG 1_555 A HOH 329 E O HOH 1_555 metalc 2.132 A MG 203 D MG MG 1_555 A HOH 334 E O HOH 1_555 CELL INVASION Small GTPase, RhoA, Y42C mutant, covalent inhibitor, CELL INVASION RHOA_HUMAN UNP 1 1 P61586 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVI LMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECS AKTKDGVREVFEMATRAALQA 1 181 9VNG 1 181 P61586 A 1 2 182 1 expression tag GLY 0 9VNG A P61586 UNP 1 1 TYR engineered mutation CYS 42 9VNG A P61586 UNP 42 43 6 anti-parallel parallel parallel parallel parallel A VAL 43 A VAL 44 A VAL 48 A VAL 49 A LYS 51 A LYS 52 A TRP 58 A TRP 59 A ILE 4 A ILE 5 A GLY 12 A GLY 13 A VAL 79 A VAL 80 A SER 85 A SER 86 A ILE 112 A ILE 113 A ASN 117 A ASN 118 A GLY 155 A GLY 156 A GLU 158 A GLU 159 19 P 21 21 21