0.005624 0.000000 0.000000 0.000000 0.041651 0.000000 0.000000 0.000000 0.020026 0.00000 0.00000 0.00000 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 16.26893 3.65395 3.58509 77.28589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0.51345 0.48472 24.73122 6.32584 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.01032 2.96436 19.97189 1.75589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.38062 1.54875 3.38349 72.32734 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.49882 3.47563 15.80542 1.70748 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.51135 5.44231 1.42069 35.72801 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0000-0002-4502-0633 Chen, X. 0009-0006-3449-7088 Luo, Y. 0009-0006-0959-2008 Ren, Y. 0000-0002-2121-365X Huang, L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 177.811 24.009 49.934 213171.457 C10 H13 N5 O4 267.241 ADENOSINE non-polymer Ca 2 40.078 CALCIUM ION non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer Na 1 22.990 SODIUM ION non-polymer N 1 N O N 2 N C N 3 R C N 4 N O N 5 S C N 6 N O N 7 R C N 8 N O N 9 R C Y 10 N N Y 11 N C Y 12 N N Y 13 N C Y 14 N C N 15 N N Y 16 N N Y 17 N C Y 18 N N Y 19 N C N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N CA N 34 N O N 35 N P N 36 N O N 37 N O N 38 N O N 39 N C N 40 R C N 41 N O N 42 S C N 43 N O N 44 N C N 45 R C Y 46 N N Y 47 N C Y 48 N N Y 49 N C Y 50 N C N 51 N N Y 52 N N Y 53 N C Y 54 N N Y 55 N C N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N O N 71 N P N 72 N O N 73 N O N 74 N O N 75 N C N 76 R C N 77 N O N 78 S C N 79 N O N 80 N C N 81 R C N 82 N N N 83 N C N 84 N O N 85 N N N 86 N C N 87 N N N 88 N C N 89 N C N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N O N 105 N P N 106 N O N 107 N O N 108 N O N 109 N C N 110 R C N 111 N O N 112 S C N 113 N O N 114 N C N 115 R C Y 116 N N Y 117 N C Y 118 N N Y 119 N C N 120 N C N 121 N O N 122 N N N 123 N C N 124 N N N 125 N N Y 126 N C N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N O N 142 N P N 143 N O N 144 N O N 145 N O N 146 N C N 147 R C N 148 N O N 149 S C N 150 N O N 151 N C N 152 R C N 153 N N N 154 N C N 155 N O N 156 N N N 157 N C N 158 N O N 159 N C N 160 N C N 161 N C N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N O N 178 N H N 179 N H N 180 N NA N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing Y 20 N sing Y 21 N sing Y 22 N doub N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N doub N 29 N sing N 30 N sing Y 31 N sing Y 32 N doub N 33 N sing Y 34 N sing N 35 N sing N 36 N sing N 37 N doub N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing Y 58 N sing Y 59 N sing Y 60 N doub N 61 N sing Y 62 N sing Y 63 N sing Y 64 N doub N 65 N sing Y 66 N doub N 67 N sing N 68 N sing Y 69 N sing Y 70 N doub N 71 N sing Y 72 N sing N 73 N sing N 74 N sing N 75 N doub N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N doub N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing Y 131 N sing Y 132 N sing Y 133 N doub N 134 N sing Y 135 N sing N 136 N sing Y 137 N doub N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N doub N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing To Be Published 0353 Crystal structure of adenosine and ATP-binding DNA aptamer 0000-0002-4502-0633 0009-0006-3449-7088 0009-0006-0959-2008 0000-0002-2121-365X 10.2210/pdb9ury/pdb pdb_00009ury 100 1 N PIXEL 2023-04-23 DECTRIS EIGER X 16M SINGLE WAVELENGTH M x-ray 1 0.979183 1.0 BL10U2 SSRF 0.979183 SYNCHROTRON SSRF BEAMLINE BL10U2 11765.560 DNA (38-MER) 2 syn polymer 267.241 ADENOSINE 2 syn non-polymer 40.078 CALCIUM ION 5 syn non-polymer 22.990 SODIUM ION 5 syn non-polymer 18.015 water 46 nat water no no (DA)(DC)(DG)(DA)(DC)(DA)(DC)(DG)(DG)(DA)(DG)(DG)(DC)(DT)(DT)(DA)(DG)(DT)(DT)(DT) (DG)(DC)(DT)(DA)(DA)(DA)(DT)(DG)(DG)(DT)(DC)(DA)(DT)(DG)(DT)(DC)(DG)(DT) ACGACACGGAGGCTTAGTTTGCTAAATGGTCATGTCGT B,A polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 2.26 45.69 VAPOR DIFFUSION, HANGING DROP 7.5 0.2 M Calcium chloride dihydrate, 0.05 M HEPES sodium pH 7.5, 28% v/v Polyethylene glycol 400, 0.002 M Spermine 291 7.914 1 20 B 1 B 38 -2.171 B_DA1:DT38_B 1 -6.407 0.162 0.384 -0.090 5.519 1 19 B 2 B 37 -1.075 B_DC2:DG37_B 2 -5.928 0.222 0.278 -0.108 4.777 1 19 B 3 B 36 -2.312 B_DG3:DC36_B 3 -8.573 -0.133 0.352 -0.177 -0.038 1 20 B 4 B 35 0.063 B_DA4:DT35_B 4 -3.943 0.082 -0.083 -0.142 9.847 1 19 B 5 B 34 0.595 B_DC5:DG34_B 5 -3.095 0.240 -0.124 -0.088 11.922 1 20 B 6 B 33 0.719 B_DA6:DT33_B 6 -15.348 0.073 0.129 -0.129 29.858 4 7 B 8 B 29 -101.284 B_DG8:DG29_B 7 -18.960 5.650 -0.163 -0.532 16.085 1 20 B 10 B 30 -0.691 B_DA10:DT30_B 8 25.244 0.098 -0.396 -0.091 8.552 1 28 B 11 B 27 -7.067 B_DG11:DT27_B 9 0.818 -2.173 -0.199 -0.670 16.169 1 8 B 12 B 26 -17.224 B_DG12:DA26_B 10 -17.344 -0.274 -0.260 1.490 -19.635 1 20 B 14 B 25 4.255 B_DT14:DA25_B 11 -27.707 -0.015 0.007 -0.108 -23.988 1 20 B 15 B 24 4.471 B_DT15:DA24_B 12 -10.690 -0.181 0.155 -0.089 -7.496 1 20 B 16 B 23 2.018 B_DA16:DT23_B 13 0.588 0.253 -0.133 -0.078 8.918 1 19 B 17 B 22 2.337 B_DG17:DC22_B 14 -8.032 -0.231 0.170 -0.123 13.832 1 B 18 B 21 42.227 B_DT18:DG21_B 15 -14.466 2.874 -0.120 0.655 3.415 1 20 A 1 A 38 2.212 A_DA1:DT38_A 16 -7.327 -0.033 0.226 -0.202 4.274 1 19 A 2 A 37 -0.866 A_DC2:DG37_A 17 -5.821 0.189 0.298 -0.141 5.224 1 19 A 3 A 36 -0.900 A_DG3:DC36_A 18 -9.209 -0.222 0.236 -0.117 4.748 1 20 A 4 A 35 1.015 A_DA4:DT35_A 19 -8.205 0.122 0.126 -0.095 8.594 1 19 A 5 A 34 -0.875 A_DC5:DG34_A 20 -11.038 0.225 0.205 -0.213 10.980 1 20 A 6 A 33 2.087 A_DA6:DT33_A 21 -19.729 0.075 -0.210 -0.079 27.399 4 7 A 8 A 29 -104.865 A_DG8:DG29_A 22 -20.541 5.727 -0.264 -0.712 24.154 1 20 A 10 A 30 -1.261 A_DA10:DT30_A 23 31.171 -0.041 0.130 -0.047 8.967 1 28 A 11 A 27 -4.572 A_DG11:DT27_A 24 5.335 -2.324 -0.157 -0.651 14.532 1 8 A 12 A 26 -17.221 A_DG12:DA26_A 25 -15.724 -0.130 -0.204 1.504 -10.691 1 20 A 14 A 25 7.761 A_DT14:DA25_A 26 -26.494 0.309 -0.053 0.041 -16.474 1 20 A 15 A 24 2.348 A_DT15:DA24_A 27 -13.665 0.020 0.161 -0.268 -10.727 1 20 A 16 A 23 1.150 A_DA16:DT23_A 28 -3.833 0.110 -0.094 -0.191 -1.898 1 19 A 17 A 22 2.046 A_DG17:DC22_A 29 -8.409 -0.311 -0.142 -0.128 12.068 1 A 18 A 21 44.892 A_DT18:DG21_A 30 -13.117 2.823 -0.202 1.112 3.457 33.860 B B 1 2 0.841 B B 38 37 3.451 0.490 0.259 -0.152 BB_DA1DC2:DG37DT38_BB 1 1.829 -3.142 33.809 -0.344 -0.133 3.373 38.235 B B 2 3 3.235 B B 37 36 3.320 2.117 0.308 0.956 BB_DC2DG3:DC36DG37_BB 2 0.911 -1.391 38.168 1.187 -0.353 3.594 39.899 B B 3 4 2.628 B B 36 35 3.581 1.792 0.011 0.446 BB_DG3DA4:DT35DC36_BB 3 1.761 -2.583 39.823 0.427 0.207 3.063 28.895 B B 4 5 4.508 B B 35 34 3.087 2.247 0.202 -0.200 BB_DA4DC5:DG34DT35_BB 4 -0.016 0.033 28.810 -0.871 -0.409 3.320 43.383 B B 5 6 -0.012 B B 34 33 3.321 -0.009 -0.153 1.335 BB_DC5DA6:DT33DG34_BB 5 0.355 -0.480 43.381 1.807 0.241 2.293 84.413 B B 6 8 -11.536 B B 33 29 2.991 -15.389 1.296 5.461 BB_DA6DG8:DG29DT33_BB 6 14.641 -10.975 82.187 4.362 -0.681 4.499 58.114 B B 10 11 14.371 B B 30 27 2.907 13.531 4.063 1.824 BB_DA10DG11:DT27DT30_BB 7 22.582 -23.985 52.280 1.013 -2.739 3.315 38.012 B B 11 12 7.031 B B 27 26 3.184 4.567 -1.881 0.483 BB_DG11DG12:DA26DT27_BB 8 -2.126 3.273 37.689 0.161 2.618 3.906 58.045 B B 12 14 -1.437 B B 26 25 3.749 -1.388 -1.296 -0.011 BB_DG12DT14:DA25DA26_BB 9 -9.994 10.344 57.236 0.075 0.710 3.315 42.582 B B 14 15 -1.235 B B 25 24 3.358 -0.897 0.665 0.958 BB_DT14DT15:DA24DA25_BB 10 -1.405 1.936 42.550 1.412 -1.060 3.376 26.126 B B 15 16 14.545 B B 24 23 3.163 6.504 -0.170 1.245 BB_DT15DA16:DT23DA24_BB 11 -1.530 3.422 25.271 0.955 -0.048 3.092 29.155 B B 16 17 6.670 B B 23 22 3.041 3.345 -0.073 0.693 BB_DA16DG17:DC22DT23_BB 12 -2.991 5.965 28.815 0.688 -0.470 3.640 37.979 B B 17 18 7.889 B B 22 21 3.327 5.096 2.198 0.207 BB_DG17DT18:DG21DC22_BB 13 6.446 -9.979 37.112 -0.382 -2.490 3.244 32.865 A A 1 2 5.715 A A 38 37 3.309 3.228 0.162 -0.522 AA_DA1DC2:DG37DT38_AA 14 0.023 -0.040 32.710 -1.477 -0.282 3.317 36.493 A A 2 3 6.434 A A 37 36 3.285 4.020 0.059 0.484 AA_DC2DG3:DC36DG37_AA 15 1.528 -2.446 36.248 0.210 0.120 3.333 37.978 A A 3 4 2.191 A A 36 35 3.331 1.425 -0.129 0.419 AA_DG3DA4:DT35DC36_AA 16 2.103 -3.233 37.896 0.458 0.471 3.240 33.695 A A 4 5 0.205 A A 35 34 3.239 0.119 -0.033 0.424 AA_DA4DC5:DG34DT35_AA 17 0.015 -0.026 33.695 0.712 0.060 2.843 54.267 A A 5 6 -10.749 A A 34 33 3.340 -9.726 0.431 2.871 AA_DC5DA6:DT33DG34_AA 18 8.271 -9.141 52.855 3.718 0.012 2.172 79.903 A A 6 8 -11.636 A A 33 29 2.869 -14.852 1.402 5.130 AA_DA6DG8:DG29DT33_AA 19 10.584 -8.292 78.135 4.304 -0.872 4.964 57.883 A A 10 11 14.119 A A 30 27 3.258 13.149 4.079 1.857 AA_DA10DG11:DT27DT30_AA 20 25.619 -27.509 50.758 0.964 -2.354 3.379 40.943 A A 11 12 4.739 A A 27 26 3.284 3.311 -1.957 0.668 AA_DG11DG12:DA26DT27_AA 21 -1.201 1.718 40.797 0.585 2.663 3.582 56.104 A A 12 14 -0.272 A A 26 25 3.508 -0.255 -0.902 -0.140 AA_DG12DT14:DA25DA26_AA 22 -6.204 6.607 55.787 -0.133 0.574 3.390 37.599 A A 14 15 5.116 A A 25 24 3.386 3.293 0.208 0.209 AA_DT14DT15:DA24DA25_AA 23 -0.251 0.391 37.459 -0.120 -0.356 3.259 31.982 A A 15 16 6.317 A A 24 23 3.240 3.471 0.017 0.424 AA_DT15DA16:DT23DA24_AA 24 2.336 -4.252 31.714 0.143 0.391 3.215 29.383 A A 16 17 15.087 A A 23 22 3.207 7.569 0.047 0.453 AA_DA16DG17:DC22DT23_AA 25 -0.765 1.525 28.402 -0.730 -0.257 3.359 38.862 A A 17 18 2.027 A A 22 21 3.122 1.345 2.256 0.291 AA_DG17DT18:DG21DC22_AA 26 4.427 -6.668 38.596 0.275 -2.855 repository Initial release 1 0 2026-11-11 China National Natural Science Foundation of China (NSFC) 32171191 huanglin36@mail.sysu.edu.cn 0000-0002-2121-365X Lin Huang principal investigator/group leader N PDBJ Y PDBC 2025-04-30 REL REL ADN ADN SUBJECT OF INVESTIGATION CA CA SUBJECT OF INVESTIGATION NA NA SUBJECT OF INVESTIGATION ADN ADENOSINE CA CALCIUM ION NA SODIUM ION HOH water 32630 synthetic construct sample 1 38 Y N BA SAD Other experimental model ADN 101 2 ADN ADN 101 B CA 2 3 CA CA 102 B CA 3 3 CA CA 103 B CA 5 3 CA CA 104 B CA 6 3 CA CA 105 B NA 2 4 NA NA 106 B NA 3 4 NA NA 107 B NA 4 4 NA NA 108 B NA 5 4 NA NA 109 B ADN 101 2 ADN ADN 101 A CA 1 3 CA CA 102 A NA 1 4 NA NA 103 A HOH 187 5 HOH HOH 201 B HOH 10 5 HOH HOH 202 B HOH 192 5 HOH HOH 203 B HOH 77 5 HOH HOH 204 B HOH 4 5 HOH HOH 205 B HOH 131 5 HOH HOH 206 B HOH 23 5 HOH HOH 207 B HOH 458 5 HOH HOH 208 B HOH 521 5 HOH HOH 209 B HOH 194 5 HOH HOH 210 B HOH 3 5 HOH HOH 211 B HOH 11 5 HOH HOH 212 B HOH 193 5 HOH HOH 213 B HOH 318 5 HOH HOH 214 B HOH 52 5 HOH HOH 215 B HOH 27 5 HOH HOH 216 B HOH 191 5 HOH HOH 217 B HOH 136 5 HOH HOH 218 B HOH 292 5 HOH HOH 219 B HOH 83 5 HOH HOH 220 B HOH 189 5 HOH HOH 221 B HOH 2 5 HOH HOH 222 B HOH 427 5 HOH HOH 223 B HOH 7 5 HOH HOH 224 B HOH 40 5 HOH HOH 225 B HOH 534 5 HOH HOH 226 B HOH 418 5 HOH HOH 227 B HOH 550 5 HOH HOH 228 B HOH 20 5 HOH HOH 229 B HOH 44 5 HOH HOH 230 B HOH 115 5 HOH HOH 201 A HOH 62 5 HOH HOH 202 A HOH 81 5 HOH HOH 203 A HOH 324 5 HOH HOH 204 A HOH 41 5 HOH HOH 205 A HOH 9 5 HOH HOH 206 A HOH 54 5 HOH HOH 207 A HOH 21 5 HOH HOH 208 A HOH 389 5 HOH HOH 209 A HOH 474 5 HOH HOH 210 A HOH 14 5 HOH HOH 211 A HOH 417 5 HOH HOH 212 A HOH 110 5 HOH HOH 213 A HOH 518 5 HOH HOH 214 A HOH 74 5 HOH HOH 215 A HOH 32 5 HOH HOH 216 A DA 1 n 1 DA 1 B DC 2 n 2 DC 2 B DG 3 n 3 DG 3 B DA 4 n 4 DA 4 B DC 5 n 5 DC 5 B DA 6 n 6 DA 6 B DC 7 n 7 DC 7 B DG 8 n 8 DG 8 B DG 9 n 9 DG 9 B DA 10 n 10 DA 10 B DG 11 n 11 DG 11 B DG 12 n 12 DG 12 B DC 13 n 13 DC 13 B DT 14 n 14 DT 14 B DT 15 n 15 DT 15 B DA 16 n 16 DA 16 B DG 17 n 17 DG 17 B DT 18 n 18 DT 18 B DT 19 n 19 DT 19 B DT 20 n 20 DT 20 B DG 21 n 21 DG 21 B DC 22 n 22 DC 22 B DT 23 n 23 DT 23 B DA 24 n 24 DA 24 B DA 25 n 25 DA 25 B DA 26 n 26 DA 26 B DT 27 n 27 DT 27 B DG 28 n 28 DG 28 B DG 29 n 29 DG 29 B DT 30 n 30 DT 30 B DC 31 n 31 DC 31 B DA 32 n 32 DA 32 B DT 33 n 33 DT 33 B DG 34 n 34 DG 34 B DT 35 n 35 DT 35 B DC 36 n 36 DC 36 B DG 37 n 37 DG 37 B DT 38 n 38 DT 38 B DA 1 n 1 DA 1 A DC 2 n 2 DC 2 A DG 3 n 3 DG 3 A DA 4 n 4 DA 4 A DC 5 n 5 DC 5 A DA 6 n 6 DA 6 A DC 7 n 7 DC 7 A DG 8 n 8 DG 8 A DG 9 n 9 DG 9 A DA 10 n 10 DA 10 A DG 11 n 11 DG 11 A DG 12 n 12 DG 12 A DC 13 n 13 DC 13 A DT 14 n 14 DT 14 A DT 15 n 15 DT 15 A DA 16 n 16 DA 16 A DG 17 n 17 DG 17 A DT 18 n 18 DT 18 A DT 19 n 19 DT 19 A DT 20 n 20 DT 20 A DG 21 n 21 DG 21 A DC 22 n 22 DC 22 A DT 23 n 23 DT 23 A DA 24 n 24 DA 24 A DA 25 n 25 DA 25 A DA 26 n 26 DA 26 A DT 27 n 27 DT 27 A DG 28 n 28 DG 28 A DG 29 n 29 DG 29 A DT 30 n 30 DT 30 A DC 31 n 31 DC 31 A DA 32 n 32 DA 32 A DT 33 n 33 DT 33 A DG 34 n 34 DG 34 A DT 35 n 35 DT 35 A DC 36 n 36 DC 36 A DG 37 n 37 DG 37 A DT 38 n 38 DT 38 A 7.56206633291 0.454633097126 2.60724491929 0.858599140575 2.22599322412 5.56153169823 -0.494557265294 0.0430573472171 1.0896132057 -0.354713858595 -0.196725908625 0.0424770831216 -0.347732949373 -0.499168093389 0.74317610171 0.375796322229 -0.0287223784328 -0.0581273042932 0.590028538718 0.00440397178041 0.62422771671 refined -29.8954452362 11.280810607 -1.26550782558 X-RAY DIFFRACTION 3.00735442129 2.76961358037 1.76194297902 3.16865119303 2.00111479481 1.5878917968 -0.47937711733 -1.26610647358 0.951822206392 -0.0117392529792 0.0210036455454 0.131622434112 -0.255058815596 -0.284014466873 0.398129219009 0.356721703366 0.000935334162067 -0.0681159022713 0.48025034744 -0.00659223897042 0.596977399025 refined -11.8026125259 14.9305936254 6.5325280711 X-RAY DIFFRACTION 6.44126285479 3.45412818093 3.46959331028 5.28016823705 2.28827833298 2.51707580661 -0.356084501018 0.810361364611 -0.504254704093 -0.271474505075 0.373895821299 -0.402196733578 -0.476333044857 -0.0119119272901 -0.000306549825394 0.506741385504 -0.0943041187693 -0.123981936922 0.829787144003 -0.0730153067389 0.626334870589 refined -35.0234168583 7.89252309583 -6.95605942332 X-RAY DIFFRACTION 3.72438139121 -1.84560774879 3.93335102096 1.51838133506 -1.63860304819 4.07973898193 -0.879222766719 -0.677132505856 -0.227203064565 0.690742636742 0.762461561049 0.218472692006 -0.95128462453 -1.07332220267 0.073774721874 0.473033657304 0.226465628869 0.00409192775926 0.848140777451 0.0166773870551 0.590758339451 refined -31.517573891 7.61060870806 -25.3092301588 X-RAY DIFFRACTION 9.32098130814 -1.78155583874 -0.0908557130611 1.21375965249 0.582212958017 3.29184387569 -0.24844067952 -0.449361270775 0.0853740713046 0.189404242217 0.252193485379 -0.0233087941456 -0.115360107541 -0.372570471879 0.0507445555628 0.389015280251 0.0666210173634 0.0179301036678 0.274010115164 0.0294722015641 0.497560767024 refined -10.1890850116 -2.5936326753 -18.6752679528 X-RAY DIFFRACTION 8.86142856231 -0.0438956732201 1.13706458268 2.39102746672 0.426280519648 3.20478886131 -0.228768412614 1.47365199295 0.166255508051 -0.318492071494 -0.284843209402 0.150627437668 0.200462486983 0.411945197335 0.541514378714 0.626422801518 0.127686650373 -0.055964668538 0.814025359554 0.216425328625 0.507875811857 refined -32.1702078043 7.36543403091 -30.0133677299 X-RAY DIFFRACTION A 1 C A 15 C X-RAY DIFFRACTION 1 chain 'A' and (resid 1 through 15 ) A 16 C A 30 C X-RAY DIFFRACTION 2 chain 'A' and (resid 16 through 30 ) A 31 C A 38 C X-RAY DIFFRACTION 3 chain 'A' and (resid 31 through 38 ) B 1 A B 10 A X-RAY DIFFRACTION 4 chain 'B' and (resid 1 through 10 ) B 11 A B 30 A X-RAY DIFFRACTION 5 chain 'B' and (resid 11 through 30 ) B 31 A B 38 A X-RAY DIFFRACTION 6 chain 'B' and (resid 31 through 38 ) author_and_software_defined_assembly PISA 4 tetrameric author_and_software_defined_assembly PISA 2 dimeric 3630 -223 24980 890 -53 13120 B DC 2 A OP1 DC 2 1_555 B CA 104 F CA CA 1_555 A DG 29 B OP1 DG 29 1_555 76.0 B DC 2 A OP1 DC 2 1_555 B CA 104 F CA CA 1_555 A HOH 208 P O HOH 1_554 118.0 A DG 29 B OP1 DG 29 1_555 B CA 104 F CA CA 1_555 A HOH 208 P O HOH 1_554 153.3 B DC 2 A OP2 DC 2 1_555 A CA 102 M CA CA 1_554 A DC 7 B O2 DC 7 1_555 53.3 B DC 2 A OP2 DC 2 1_555 A CA 102 M CA CA 1_554 A DG 8 B O6 DG 8 1_555 54.7 A DC 7 B O2 DC 7 1_555 A CA 102 M CA CA 1_554 A DG 8 B O6 DG 8 1_555 2.1 B DC 2 A OP2 DC 2 1_555 A CA 102 M CA CA 1_554 A DG 29 B OP2 DG 29 1_555 53.7 A DC 7 B O2 DC 7 1_555 A CA 102 M CA CA 1_554 A DG 29 B OP2 DG 29 1_555 5.5 A DG 8 B O6 DG 8 1_555 A CA 102 M CA CA 1_554 A DG 29 B OP2 DG 29 1_555 4.0 B DC 2 A OP2 DC 2 1_555 A CA 102 M CA CA 1_554 A HOH 206 P O HOH 1_555 54.2 A DC 7 B O2 DC 7 1_555 A CA 102 M CA CA 1_554 A HOH 206 P O HOH 1_555 2.6 A DG 8 B O6 DG 8 1_555 A CA 102 M CA CA 1_554 A HOH 206 P O HOH 1_555 1.0 A DG 29 B OP2 DG 29 1_555 A CA 102 M CA CA 1_554 A HOH 206 P O HOH 1_555 3.1 B DC 2 A OP2 DC 2 1_555 A CA 102 M CA CA 1_554 A HOH 212 P O HOH 1_555 51.3 A DC 7 B O2 DC 7 1_555 A CA 102 M CA CA 1_554 A HOH 212 P O HOH 1_555 3.4 A DG 8 B O6 DG 8 1_555 A CA 102 M CA CA 1_554 A HOH 212 P O HOH 1_555 3.5 A DG 29 B OP2 DG 29 1_555 A CA 102 M CA CA 1_554 A HOH 212 P O HOH 1_555 3.6 A HOH 206 P O HOH 1_555 A CA 102 M CA CA 1_554 A HOH 212 P O HOH 1_555 2.9 B DC 13 A OP2 DC 13 1_555 B CA 105 G CA CA 1_555 B DG 21 A OP1 DG 21 1_555 148.6 B DC 13 A OP2 DC 13 1_555 B CA 105 G CA CA 1_555 B HOH 220 O O HOH 1_555 124.5 B DG 21 A OP1 DG 21 1_555 B CA 105 G CA CA 1_555 B HOH 220 O O HOH 1_555 78.5 B DC 13 A OP2 DC 13 1_555 B CA 105 G CA CA 1_555 B HOH 221 O O HOH 2_555 92.9 B DG 21 A OP1 DG 21 1_555 B CA 105 G CA CA 1_555 B HOH 221 O O HOH 2_555 59.9 B HOH 220 O O HOH 1_555 B CA 105 G CA CA 1_555 B HOH 221 O O HOH 2_555 138.0 B DC 13 A OP2 DC 13 1_555 B CA 105 G CA CA 1_555 B HOH 222 O O HOH 1_555 103.4 B DG 21 A OP1 DG 21 1_555 B CA 105 G CA CA 1_555 B HOH 222 O O HOH 1_555 105.4 B HOH 220 O O HOH 1_555 B CA 105 G CA CA 1_555 B HOH 222 O O HOH 1_555 68.3 B HOH 221 O O HOH 2_555 B CA 105 G CA CA 1_555 B HOH 222 O O HOH 1_555 125.5 B DT 14 A OP1 DT 14 1_555 B CA 102 D CA CA 2_555 B DT 20 A OP2 DT 20 1_555 80.8 B DT 14 A OP1 DT 14 1_555 B CA 102 D CA CA 2_555 B DA 24 A OP1 DA 24 1_555 35.2 B DT 20 A OP2 DT 20 1_555 B CA 102 D CA CA 2_555 B DA 24 A OP1 DA 24 1_555 48.2 B DT 14 A OP1 DT 14 1_555 B CA 102 D CA CA 2_555 B HOH 212 O O HOH 2_555 85.7 B DT 20 A OP2 DT 20 1_555 B CA 102 D CA CA 2_555 B HOH 212 O O HOH 2_555 6.7 B DA 24 A OP1 DA 24 1_555 B CA 102 D CA CA 2_555 B HOH 212 O O HOH 2_555 52.0 B DT 14 A OP1 DT 14 1_555 B CA 102 D CA CA 2_555 B HOH 225 O O HOH 2_555 87.9 B DT 20 A OP2 DT 20 1_555 B CA 102 D CA CA 2_555 B HOH 225 O O HOH 2_555 8.7 B DA 24 A OP1 DA 24 1_555 B CA 102 D CA CA 2_555 B HOH 225 O O HOH 2_555 54.1 B HOH 212 O O HOH 2_555 B CA 102 D CA CA 2_555 B HOH 225 O O HOH 2_555 2.3 B DG 17 A O6 DG 17 1_555 B NA 108 J NA NA 1_555 B DT 18 A O4 DT 18 1_555 117.4 B DG 17 A O6 DG 17 1_555 B NA 108 J NA NA 1_555 B DG 21 A O6 DG 21 1_555 81.6 B DT 18 A O4 DT 18 1_555 B NA 108 J NA NA 1_555 B DG 21 A O6 DG 21 1_555 141.3 B DG 17 A O6 DG 17 1_555 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 1_555 64.5 B DT 18 A O4 DT 18 1_555 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 1_555 78.6 B DG 21 A O6 DG 21 1_555 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 1_555 138.5 B DG 17 A O6 DG 17 1_555 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 2_555 119.4 B DT 18 A O4 DT 18 1_555 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 2_555 57.1 B DG 21 A O6 DG 21 1_555 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 2_555 144.8 B HOH 203 O O HOH 1_555 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 2_555 55.1 B DT 20 A OP1 DT 20 1_555 B NA 106 H NA NA 1_555 B HOH 213 O O HOH 1_555 69.4 B DT 20 A OP1 DT 20 1_555 B NA 106 H NA NA 1_555 B HOH 222 O O HOH 2_555 78.3 B HOH 213 O O HOH 1_555 B NA 106 H NA NA 1_555 B HOH 222 O O HOH 2_555 71.8 B DT 20 A OP1 DT 20 1_555 B NA 106 H NA NA 1_555 B HOH 224 O O HOH 1_555 88.9 B HOH 213 O O HOH 1_555 B NA 106 H NA NA 1_555 B HOH 224 O O HOH 1_555 132.1 B HOH 222 O O HOH 2_555 B NA 106 H NA NA 1_555 B HOH 224 O O HOH 1_555 61.9 B DT 27 A O2 DT 27 1_555 B NA 107 I NA NA 1_555 B DT 30 A O4 DT 30 1_555 81.1 B HOH 205 O O HOH 1_555 B CA 103 E CA CA 1_555 B HOH 211 O O HOH 1_555 74.0 B HOH 205 O O HOH 1_555 B CA 103 E CA CA 1_555 B HOH 216 O O HOH 2_545 87.1 B HOH 211 O O HOH 1_555 B CA 103 E CA CA 1_555 B HOH 216 O O HOH 2_545 161.0 B HOH 205 O O HOH 1_555 B CA 103 E CA CA 1_555 B HOH 229 O O HOH 1_555 86.9 B HOH 211 O O HOH 1_555 B CA 103 E CA CA 1_555 B HOH 229 O O HOH 1_555 72.5 B HOH 216 O O HOH 2_545 B CA 103 E CA CA 1_555 B HOH 229 O O HOH 1_555 104.9 B HOH 205 O O HOH 1_555 B CA 103 E CA CA 1_555 B HOH 230 O O HOH 1_555 142.8 B HOH 211 O O HOH 1_555 B CA 103 E CA CA 1_555 B HOH 230 O O HOH 1_555 134.7 B HOH 216 O O HOH 2_545 B CA 103 E CA CA 1_555 B HOH 230 O O HOH 1_555 61.5 B HOH 229 O O HOH 1_555 B CA 103 E CA CA 1_555 B HOH 230 O O HOH 1_555 82.8 B HOH 223 O O HOH 1_555 B NA 109 K NA NA 1_555 B HOH 227 O O HOH 1_555 107.0 A HOH 211 P O HOH 1_555 A NA 103 N NA NA 1_555 A HOH 216 P O HOH 1_555 75.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_554 x,y,z-1 crystal symmetry operation 0.0000000000 0.0000000000 -49.9340000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_554 -x,-y,z-1 crystal symmetry operation 0.0000000000 0.0000000000 -49.9340000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -x,-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1 B HOH 206 O HOH 1 A HOH 209 P HOH 1 A A O O HOH HOH 213 215 2.03 1 B B O O HOH HOH 226 228 2.12 1 A A OP2 O DG HOH 21 201 2.13 1 A A OP2 O DG HOH 37 202 2.13 1 2.31 0.30 108.30 110.61 B B B O4' C1' N1 DC DC DC 5 5 5 N 1 2.60 0.30 108.30 110.90 B B B O4' C1' N9 DG DG DG 11 11 11 N 1 -4.25 0.70 108.00 103.75 B B B O4' C1' N1 DT DT DT 15 15 15 N 1 2.16 0.30 108.30 110.46 B B B O4' C1' N9 DA DA DA 24 24 24 N 1 1.85 0.30 108.30 110.15 A A A O4' C1' N9 DG DG DG 17 17 17 N 1 2.49 0.30 108.30 110.79 A A A O4' C1' N9 DG DG DG 28 28 28 N 1 B B O3' C3' DC DC 7 7 -0.037 0.006 1.419 1.382 N 1 B B O3' C3' DA DA 16 16 -0.055 0.006 1.419 1.364 N 1 B B O3' C3' DG DG 17 17 -0.046 0.006 1.419 1.373 N 1 A A O3' C3' DA DA 16 16 -0.043 0.006 1.419 1.376 N 1 A A O3' C3' DG DG 17 17 -0.040 0.006 1.419 1.379 N 1 A A O3' C3' DA DA 24 24 -0.047 0.006 1.419 1.372 N 1 A A O3' C3' DA DA 25 25 -0.038 0.006 1.419 1.381 N 1 A A O3' C3' DT DT 35 35 -0.039 0.006 1.419 1.380 N 1 A A O O HOH HOH 214 214 1.53 1_555 2_575 59.52 0.2449 0.2028 0.2051 2.33 29.64 509 9351 9860 5.16 99.70 0.3463 1 FREE R-VALUE 1.36 MOLECULAR REPLACEMENT 32.6565 0.9000 1.1000 GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 2.33 29.64 46 1656 48 1562 0 0.0100 1794 1.1293 2766 0.0603 310 0.0090 78 33.4269 864 d_2 B A ens_1 X-RAY DIFFRACTION Torsion NCS 1.81429325819 0.3755 0.3505 2.56 115 2280 99.92 0.4034 0.3244 2.93 120 2314 99.92 0.2219 0.1902 3.69 137 2283 99.42 0.2103 0.1639 29.64 137 2474 99.54 58.73 2.33 48.07 9URY 9919 0.995 0.112 0.041 1 11.700 8.1 99.9 0.793 2.33 2.45 1406 0.747 0.314 1 refinement PHENIX 1.21.1_5286 data reduction autoPROC data scaling autoPROC phasing PHASER 18 orthorhombic P 21 21 2 P 2 2ab x,y,z x+1/2,-y+1/2,-z -x+1/2,y+1/2,-z -x,-y,z N Crystal structure of Ade1304 DNA aptamer (Ade1304b) bound to adenosine 1 N N 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N 2 N N 3 N N 4 N N 5 N N 5 N N metalc 1.956 B DC 2 A OP1 DC 2 1_555 B CA 104 F CA CA 1_555 metalc 2.328 B DC 2 A OP2 DC 2 1_555 A CA 102 M CA CA 1_554 metalc 2.466 B DC 13 A OP2 DC 13 1_555 B CA 105 G CA CA 1_555 metalc 2.392 B DT 14 A OP1 DT 14 1_555 B CA 102 D CA CA 2_555 metalc 2.979 B DG 17 A O6 DG 17 1_555 B NA 108 J NA NA 1_555 metalc 3.195 B DT 18 A O4 DT 18 1_555 B NA 108 J NA NA 1_555 metalc 2.645 B DT 20 A OP2 DT 20 1_555 B CA 102 D CA CA 1_555 metalc 2.634 B DT 20 A OP1 DT 20 1_555 B NA 106 H NA NA 1_555 metalc 2.438 B DG 21 A OP1 DG 21 1_555 B CA 105 G CA CA 2_555 metalc 2.681 B DG 21 A O6 DG 21 1_555 B NA 108 J NA NA 1_555 metalc 2.506 B DA 24 A OP1 DA 24 1_555 B CA 102 D CA CA 2_545 metalc 3.009 B DT 27 A O2 DT 27 1_555 B NA 107 I NA NA 1_555 metalc 2.908 B DT 30 A O4 DT 30 1_555 B NA 107 I NA NA 1_555 metalc 2.261 B CA 102 D CA CA 1_555 B HOH 212 O O HOH 2_555 metalc 2.737 B CA 102 D CA CA 1_555 B HOH 225 O O HOH 2_555 metalc 2.563 B CA 103 E CA CA 1_555 B HOH 205 O O HOH 1_555 metalc 2.521 B CA 103 E CA CA 1_555 B HOH 211 O O HOH 1_555 metalc 2.318 B CA 103 E CA CA 1_555 B HOH 216 O O HOH 2_545 metalc 1.982 B CA 103 E CA CA 1_555 B HOH 229 O O HOH 1_555 metalc 2.342 B CA 103 E CA CA 1_555 B HOH 230 O O HOH 1_555 metalc 2.430 B CA 104 F CA CA 1_556 A DG 29 B OP1 DG 29 1_555 metalc 2.117 B CA 104 F CA CA 1_555 A HOH 208 P O HOH 1_554 metalc 2.587 B CA 105 G CA CA 1_555 B HOH 220 O O HOH 1_555 metalc 3.199 B CA 105 G CA CA 1_555 B HOH 221 O O HOH 2_555 metalc 2.676 B CA 105 G CA CA 1_555 B HOH 222 O O HOH 1_555 metalc 2.161 B NA 106 H NA NA 1_555 B HOH 213 O O HOH 1_555 metalc 3.117 B NA 106 H NA NA 1_555 B HOH 222 O O HOH 2_555 metalc 2.228 B NA 106 H NA NA 1_555 B HOH 224 O O HOH 1_555 metalc 2.551 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 1_555 metalc 2.638 B NA 108 J NA NA 1_555 B HOH 203 O O HOH 2_555 metalc 2.429 B NA 109 K NA NA 1_555 B HOH 223 O O HOH 1_555 metalc 2.291 B NA 109 K NA NA 1_555 B HOH 227 O O HOH 1_555 metalc 2.550 A DC 7 B O2 DC 7 1_555 A CA 102 M CA CA 1_555 metalc 2.149 A DG 8 B O6 DG 8 1_555 A CA 102 M CA CA 1_555 metalc 2.537 A DG 29 B OP2 DG 29 1_555 A CA 102 M CA CA 1_555 metalc 2.194 A CA 102 M CA CA 1_555 A HOH 206 P O HOH 1_555 metalc 2.026 A CA 102 M CA CA 1_555 A HOH 212 P O HOH 1_555 metalc 2.736 A NA 103 N NA NA 1_555 A HOH 211 P O HOH 1_555 metalc 1.905 A NA 103 N NA NA 1_555 A HOH 216 P O HOH 1_555 hydrog WATSON-CRICK A DA 1 B N1 DA 1 1_555 A DT 38 B N3 DT 38 1_555 hydrog WATSON-CRICK A DA 1 B N6 DA 1 1_555 A DT 38 B O4 DT 38 1_555 hydrog WATSON-CRICK A DC 2 B N3 DC 2 1_555 A DG 37 B N1 DG 37 1_555 hydrog WATSON-CRICK A DC 2 B N4 DC 2 1_555 A DG 37 B O6 DG 37 1_555 hydrog WATSON-CRICK A DC 2 B O2 DC 2 1_555 A DG 37 B N2 DG 37 1_555 hydrog WATSON-CRICK A DG 3 B N1 DG 3 1_555 A DC 36 B N3 DC 36 1_555 hydrog WATSON-CRICK A DG 3 B N2 DG 3 1_555 A DC 36 B O2 DC 36 1_555 hydrog WATSON-CRICK A DG 3 B O6 DG 3 1_555 A DC 36 B N4 DC 36 1_555 hydrog WATSON-CRICK A DA 4 B N1 DA 4 1_555 A DT 35 B N3 DT 35 1_555 hydrog WATSON-CRICK A DA 4 B N6 DA 4 1_555 A DT 35 B O4 DT 35 1_555 hydrog WATSON-CRICK A DC 5 B N3 DC 5 1_555 A DG 34 B N1 DG 34 1_555 hydrog WATSON-CRICK A DC 5 B N4 DC 5 1_555 A DG 34 B O6 DG 34 1_555 hydrog WATSON-CRICK A DC 5 B O2 DC 5 1_555 A DG 34 B N2 DG 34 1_555 hydrog WATSON-CRICK A DA 6 B N1 DA 6 1_555 A DT 33 B N3 DT 33 1_555 hydrog WATSON-CRICK A DA 6 B N6 DA 6 1_555 A DT 33 B O4 DT 33 1_555 hydrog TYPE_7_PAIR A DG 8 B N1 DG 8 1_555 A DG 29 B N7 DG 29 1_555 hydrog TYPE_7_PAIR A DG 8 B N2 DG 8 1_555 A DG 29 B O6 DG 29 1_555 hydrog TYPE_11_PAIR A DA 10 B N6 DA 10 1_555 A DG 28 B N3 DG 28 1_555 hydrog TYPE_11_PAIR A DA 10 B N7 DA 10 1_555 A DG 28 B N2 DG 28 1_555 hydrog WATSON-CRICK A DA 10 B N1 DA 10 1_555 A DT 30 B N3 DT 30 1_555 hydrog WATSON-CRICK A DA 10 B N6 DA 10 1_555 A DT 30 B O4 DT 30 1_555 hydrog DG-DC PAIR A DG 11 B N2 DG 11 1_555 A DC 13 B N3 DC 13 1_555 hydrog TYPE_28_PAIR A DG 11 B N1 DG 11 1_555 A DT 27 B O2 DT 27 1_555 hydrog TYPE_28_PAIR A DG 11 B O6 DG 11 1_555 A DT 27 B N3 DT 27 1_555 hydrog TYPE_8_PAIR A DG 12 B N1 DG 12 1_555 A DA 26 B N1 DA 26 1_555 hydrog TYPE_8_PAIR A DG 12 B O6 DG 12 1_555 A DA 26 B N6 DA 26 1_555 hydrog WATSON-CRICK A DT 14 B N3 DT 14 1_555 A DA 25 B N1 DA 25 1_555 hydrog WATSON-CRICK A DT 14 B O4 DT 14 1_555 A DA 25 B N6 DA 25 1_555 hydrog WATSON-CRICK A DT 15 B N3 DT 15 1_555 A DA 24 B N1 DA 24 1_555 hydrog WATSON-CRICK A DT 15 B O4 DT 15 1_555 A DA 24 B N6 DA 24 1_555 hydrog WATSON-CRICK A DA 16 B N1 DA 16 1_555 A DT 23 B N3 DT 23 1_555 hydrog WATSON-CRICK A DA 16 B N6 DA 16 1_555 A DT 23 B O4 DT 23 1_555 hydrog WATSON-CRICK A DG 17 B N1 DG 17 1_555 A DC 22 B N3 DC 22 1_555 hydrog WATSON-CRICK A DG 17 B N2 DG 17 1_555 A DC 22 B O2 DC 22 1_555 hydrog WATSON-CRICK A DG 17 B O6 DG 17 1_555 A DC 22 B N4 DC 22 1_555 hydrog DT-DG MISPAIR A DT 18 B O2 DT 18 1_555 A DG 21 B N2 DG 21 1_555 hydrog TYPE_11_PAIR A DG 29 B N2 DG 29 1_555 A DA 32 B N7 DA 32 1_555 hydrog TYPE_11_PAIR A DG 29 B N3 DG 29 1_555 A DA 32 B N6 DA 32 1_555 hydrog WATSON-CRICK B DA 1 A N1 DA 1 1_555 B DT 38 A N3 DT 38 1_555 hydrog WATSON-CRICK B DA 1 A N6 DA 1 1_555 B DT 38 A O4 DT 38 1_555 hydrog WATSON-CRICK B DC 2 A N3 DC 2 1_555 B DG 37 A N1 DG 37 1_555 hydrog WATSON-CRICK B DC 2 A N4 DC 2 1_555 B DG 37 A O6 DG 37 1_555 hydrog WATSON-CRICK B DC 2 A O2 DC 2 1_555 B DG 37 A N2 DG 37 1_555 hydrog WATSON-CRICK B DG 3 A N1 DG 3 1_555 B DC 36 A N3 DC 36 1_555 hydrog WATSON-CRICK B DG 3 A N2 DG 3 1_555 B DC 36 A O2 DC 36 1_555 hydrog WATSON-CRICK B DG 3 A O6 DG 3 1_555 B DC 36 A N4 DC 36 1_555 hydrog WATSON-CRICK B DA 4 A N1 DA 4 1_555 B DT 35 A N3 DT 35 1_555 hydrog WATSON-CRICK B DA 4 A N6 DA 4 1_555 B DT 35 A O4 DT 35 1_555 hydrog WATSON-CRICK B DC 5 A N3 DC 5 1_555 B DG 34 A N1 DG 34 1_555 hydrog WATSON-CRICK B DC 5 A N4 DC 5 1_555 B DG 34 A O6 DG 34 1_555 hydrog WATSON-CRICK B DC 5 A O2 DC 5 1_555 B DG 34 A N2 DG 34 1_555 hydrog WATSON-CRICK B DA 6 A N1 DA 6 1_555 B DT 33 A N3 DT 33 1_555 hydrog WATSON-CRICK B DA 6 A N6 DA 6 1_555 B DT 33 A O4 DT 33 1_555 hydrog TYPE_7_PAIR B DG 8 A N1 DG 8 1_555 B DG 29 A N7 DG 29 1_555 hydrog TYPE_7_PAIR B DG 8 A N2 DG 8 1_555 B DG 29 A O6 DG 29 1_555 hydrog TYPE_11_PAIR B DA 10 A N6 DA 10 1_555 B DG 28 A N3 DG 28 1_555 hydrog TYPE_11_PAIR B DA 10 A N7 DA 10 1_555 B DG 28 A N2 DG 28 1_555 hydrog WATSON-CRICK B DA 10 A N1 DA 10 1_555 B DT 30 A N3 DT 30 1_555 hydrog WATSON-CRICK B DA 10 A N6 DA 10 1_555 B DT 30 A O4 DT 30 1_555 hydrog DG-DC PAIR B DG 11 A N2 DG 11 1_555 B DC 13 A N3 DC 13 1_555 hydrog TYPE_28_PAIR B DG 11 A N1 DG 11 1_555 B DT 27 A O2 DT 27 1_555 hydrog TYPE_28_PAIR B DG 11 A O6 DG 11 1_555 B DT 27 A N3 DT 27 1_555 hydrog DG-DT MISPAIR B DG 11 A N2 DG 11 1_555 B DT 30 A O4 DT 30 1_555 hydrog TYPE_8_PAIR B DG 12 A N1 DG 12 1_555 B DA 26 A N1 DA 26 1_555 hydrog TYPE_8_PAIR B DG 12 A O6 DG 12 1_555 B DA 26 A N6 DA 26 1_555 hydrog WATSON-CRICK B DT 14 A N3 DT 14 1_555 B DA 25 A N1 DA 25 1_555 hydrog WATSON-CRICK B DT 14 A O4 DT 14 1_555 B DA 25 A N6 DA 25 1_555 hydrog WATSON-CRICK B DT 15 A N3 DT 15 1_555 B DA 24 A N1 DA 24 1_555 hydrog WATSON-CRICK B DT 15 A O4 DT 15 1_555 B DA 24 A N6 DA 24 1_555 hydrog WATSON-CRICK B DA 16 A N1 DA 16 1_555 B DT 23 A N3 DT 23 1_555 hydrog WATSON-CRICK B DA 16 A N6 DA 16 1_555 B DT 23 A O4 DT 23 1_555 hydrog WATSON-CRICK B DG 17 A N1 DG 17 1_555 B DC 22 A N3 DC 22 1_555 hydrog WATSON-CRICK B DG 17 A N2 DG 17 1_555 B DC 22 A O2 DC 22 1_555 hydrog WATSON-CRICK B DG 17 A O6 DG 17 1_555 B DC 22 A N4 DC 22 1_555 hydrog DT-DG MISPAIR B DT 18 A O2 DT 18 1_555 B DG 21 A N1 DG 21 1_555 hydrog TYPE_11_PAIR B DG 29 A N2 DG 29 1_555 B DA 32 A N7 DA 32 1_555 hydrog TYPE_11_PAIR B DG 29 A N3 DG 29 1_555 B DA 32 A N6 DA 32 1_555 DNA Adenosine/ATP DNA aptamer, adenosine, DNA (chain "A" and (resid 1 through 38 or (resid 101 and (name C1" or name C2 or name C2" or name C3" or name C4 or name C4" or name C5 or name C5" or name C6 or name C8 or name N1 or name N3 or name N6 or name N7 or name N9 or name O2" or name O3" or name O4" or name O5")))) (chain "B" and (resid 1 through 38 or (resid 101 and (name C1" or name C2 or name C2" or name C3" or name C4 or name C4" or name C5 or name C5" or name C6 or name C8 or name N1 or name N3 or name N6 or name N7 or name N9 or name O2" or name O3" or name O4" or name O5")))) A DA 1 B DA 1 A DT 14 B DT 14 A ADN 101 L ADN A ADN 101 L ADN B DA 1 A DA 1 B DT 14 A DT 14 B ADN 101 C ADN B ADN 101 C ADN given 0.801216316354 0.597405266331 -0.0340494077669 -0.587407133814 0.774411493253 -0.235031270818 -0.114040666226 0.208311754057 0.971391239186 -8.47718310284 -21.0110076117 -28.6130010514 9URY PDB 1 1 9URY 1 38 9URY 1 38 9URY B 1 1 38 1 38 9URY 1 38 9URY A 1 1 38 18 P 21 21 2 P 2 2ab