0.012232 0.000000 0.001023 0.000000 0.035953 0.000000 0.000000 0.000000 0.019403 0.00000 0.00000 0.00000 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 16.26893 3.65395 3.58509 77.28589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0.51345 0.48472 24.73122 6.32584 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.01032 2.96436 19.97189 1.75589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.38062 1.54875 3.38349 72.32734 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.49882 3.47563 15.80542 1.70748 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.51135 5.44231 1.42069 35.72801 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0000-0002-4502-0633 Chen, X. 0009-0006-3449-7088 Luo, Y. 0009-0006-0959-2008 Ren, Y. 0000-0002-2121-365X Huang, L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 94.782 90.000 81.753 27.814 51.718 117191.187 C10 H14 N5 O7 P 347.221 ADENOSINE MONOPHOSPHATE non-polymer Ca 2 40.078 CALCIUM ION non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer Na 1 22.990 SODIUM ION non-polymer N 1 N P N 2 N O N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N CA N 39 N O N 40 N P N 41 N O N 42 N O N 43 N O N 44 N C N 45 R C N 46 N O N 47 S C N 48 N O N 49 N C N 50 R C Y 51 N N Y 52 N C Y 53 N N Y 54 N C Y 55 N C N 56 N N Y 57 N N Y 58 N C Y 59 N N Y 60 N C N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N O N 76 N P N 77 N O N 78 N O N 79 N O N 80 N C N 81 R C N 82 N O N 83 S C N 84 N O N 85 N C N 86 R C N 87 N N N 88 N C N 89 N O N 90 N N N 91 N C N 92 N N N 93 N C N 94 N C N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N O N 110 N P N 111 N O N 112 N O N 113 N O N 114 N C N 115 R C N 116 N O N 117 S C N 118 N O N 119 N C N 120 R C Y 121 N N Y 122 N C Y 123 N N Y 124 N C N 125 N C N 126 N O N 127 N N N 128 N C N 129 N N N 130 N N Y 131 N C N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N O N 147 N P N 148 N O N 149 N O N 150 N O N 151 N C N 152 R C N 153 N O N 154 S C N 155 N O N 156 N C N 157 R C N 158 N N N 159 N C N 160 N O N 161 N N N 162 N C N 163 N O N 164 N C N 165 N C N 166 N C N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N O N 183 N H N 184 N H N 185 N NA N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing Y 63 N sing Y 64 N sing Y 65 N doub N 66 N sing Y 67 N sing Y 68 N sing Y 69 N doub N 70 N sing Y 71 N doub N 72 N sing N 73 N sing Y 74 N sing Y 75 N doub N 76 N sing Y 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing Y 136 N sing Y 137 N sing Y 138 N doub N 139 N sing Y 140 N sing N 141 N sing Y 142 N doub N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing To Be Published 0353 Crystal structure of adenosine and ATP-binding DNA aptamer 0000-0002-4502-0633 0009-0006-3449-7088 0009-0006-0959-2008 0000-0002-2121-365X 10.2210/pdb9urv/pdb pdb_00009urv 100 1 N PIXEL 2024-03-24 DECTRIS EIGER2 S 9M SINGLE WAVELENGTH M x-ray 1 0.979183 1.0 BL02U1 SSRF 0.979183 SYNCHROTRON SSRF BEAMLINE BL02U1 13618.746 DNA (44-MER) 1 syn polymer 347.221 ADENOSINE MONOPHOSPHATE 1 syn non-polymer 40.078 CALCIUM ION 3 syn non-polymer 22.990 SODIUM ION 3 syn non-polymer 18.015 water 214 nat water no no (DT)(DG)(DT)(DA)(DC)(DG)(DA)(DC)(DA)(DC)(DG)(DG)(DA)(DG)(DG)(DC)(DT)(DT)(DA)(DG) (DT)(DT)(DT)(DG)(DC)(DT)(DA)(DA)(DA)(DT)(DG)(DG)(DT)(DC)(DA)(DT)(DG)(DT)(DC)(DG) (DT)(DA)(DC)(DA) TGTACGACACGGAGGCTTAGTTTGCTAAATGGTCATGTCGTACA A polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 2.15 42.82 VAPOR DIFFUSION, HANGING DROP 0.2 M Calcium chloride dihydrate, 0.05 M HEPES sodium pH 7.8, 30% v/v Polyethylene glycol 400, 0.002 M Spermine tetrahydrochloride 291 2.191 1 19 A -1 A 40 -0.423 A_DG-1:DC40_A 1 -10.802 -0.248 0.179 -0.141 6.887 1 20 A 0 A 39 -2.751 A_DT0:DA39_A 2 -8.928 -0.170 -0.200 -0.132 -2.412 1 20 A 1 A 38 4.094 A_DA1:DT38_A 3 -9.547 0.036 0.090 -0.114 1.905 1 19 A 2 A 37 -2.239 A_DC2:DG37_A 4 -6.107 0.176 -0.077 -0.188 2.602 1 19 A 3 A 36 -0.921 A_DG3:DC36_A 5 -11.244 0.037 0.030 -0.148 2.172 1 20 A 4 A 35 -0.230 A_DA4:DT35_A 6 -3.162 0.126 0.109 -0.183 12.181 1 19 A 5 A 34 1.598 A_DC5:DG34_A 7 0.409 0.140 -0.203 -0.116 19.505 1 20 A 6 A 33 2.019 A_DA6:DT33_A 8 -18.292 0.200 -0.035 -0.071 37.776 4 7 A 8 A 29 -100.205 A_DG8:DG29_A 9 -12.094 5.742 0.020 -0.738 20.560 1 20 A 10 A 30 1.602 A_DA10:DT30_A 10 28.929 0.122 -0.308 0.009 7.613 1 28 A 11 A 27 -6.876 A_DG11:DT27_A 11 2.586 -2.140 -0.256 -0.533 13.385 1 8 A 12 A 26 -21.850 A_DG12:DA26_A 12 -16.394 -0.186 -0.176 1.469 -13.056 1 20 A 14 A 25 1.652 A_DT14:DA25_A 13 -17.253 -0.234 0.237 -0.170 -13.403 1 20 A 15 A 24 2.323 A_DT15:DA24_A 14 -22.314 -0.049 0.028 -0.082 -8.917 1 20 A 16 A 23 -0.758 A_DA16:DT23_A 15 1.472 0.054 -0.177 -0.144 6.257 1 19 A 17 A 22 -0.578 A_DG17:DC22_A 16 -0.988 -0.118 0.045 -0.151 2.850 31.172 A A -1 0 18.437 A A 40 39 3.259 9.719 -0.210 -0.639 AA_DG-1DT0:DA39DC40_AA 1 4.249 -8.060 29.354 -2.974 1.171 3.053 35.201 A A 0 1 13.032 A A 39 38 3.393 7.819 0.660 -1.141 AA_DT0DA1:DT38DA39_AA 2 -0.749 1.249 34.340 -3.049 -1.202 3.173 29.858 A A 1 2 6.075 A A 38 37 3.253 3.124 -0.377 -0.433 AA_DA1DC2:DG37DT38_AA 3 1.289 -2.507 29.671 -1.481 0.996 3.397 38.359 A A 2 3 8.098 A A 37 36 3.327 5.303 -0.475 0.624 AA_DC2DG3:DC36DG37_AA 4 -1.629 2.487 37.971 0.265 0.513 3.269 39.519 A A 3 4 0.563 A A 36 35 3.278 0.381 0.212 0.272 AA_DG3DA4:DT35DC36_AA 5 -1.667 2.466 39.483 0.357 -0.509 3.172 26.385 A A 4 5 8.117 A A 35 34 3.164 3.683 0.715 -0.204 AA_DA4DC5:DG34DT35_AA 6 3.509 -7.734 25.899 -1.409 -0.651 3.301 39.206 A A 5 6 6.026 A A 34 33 3.207 4.037 -0.594 1.176 AA_DC5DA6:DT33DG34_AA 7 0.456 -0.681 39.003 1.272 0.940 2.704 82.432 A A 6 8 -7.453 A A 33 29 3.040 -9.762 1.455 5.284 AA_DA6DG8:DG29DT33_AA 8 16.283 -12.432 80.599 4.226 -0.744 4.667 58.896 A A 10 11 14.877 A A 30 27 3.061 14.116 3.921 1.822 AA_DA10DG11:DT27DT30_AA 9 24.633 -25.960 52.148 0.928 -2.374 3.391 39.671 A A 11 12 5.552 A A 27 26 3.251 3.760 -1.864 0.568 AA_DG11DG12:DA26DT27_AA 10 -2.375 3.507 39.431 0.390 2.464 3.570 58.892 A A 12 14 -7.993 A A 26 25 3.593 -7.829 -0.476 0.199 AA_DG12DT14:DA25DA26_AA 11 -5.615 5.732 58.168 0.647 0.165 3.260 34.032 A A 14 15 -1.977 A A 25 24 3.271 -1.157 -0.718 0.069 AA_DT14DT15:DA24DA25_AA 12 0.370 -0.632 34.011 0.301 1.286 3.101 42.976 A A 15 16 -5.742 A A 24 23 3.279 -4.200 0.608 1.786 AA_DT15DA16:DT23DA24_AA 13 0.129 -0.177 42.780 2.844 -0.817 3.020 26.794 A A 16 17 -0.277 A A 23 22 3.087 -0.128 0.442 -0.413 AA_DA16DG17:DC22DT23_AA 14 -3.058 6.612 26.621 -0.859 -1.695 repository Initial release 1 0 2026-11-11 China National Natural Science Foundation of China (NSFC) 32171191 huanglin36@mail.sysu.edu.cn 0000-0002-2121-365X Lin Huang principal investigator/group leader N PDBJ Y PDBC 2025-04-30 REL REL AMP AMP SUBJECT OF INVESTIGATION CA CA SUBJECT OF INVESTIGATION NA NA SUBJECT OF INVESTIGATION AMP ADENOSINE MONOPHOSPHATE CA CALCIUM ION NA SODIUM ION HOH water 32630 synthetic construct sample 1 44 Y N Ba SAD Other experimental model AMP 101 2 AMP AMP 101 A CA 2 3 CA CA 102 A CA 5 3 CA CA 103 A CA 6 3 CA CA 104 A NA 1 4 NA NA 105 A NA 2 4 NA NA 106 A NA 3 4 NA NA 107 A HOH 936 5 HOH HOH 201 A HOH 135 5 HOH HOH 202 A HOH 452 5 HOH HOH 203 A HOH 205 5 HOH HOH 204 A HOH 96 5 HOH HOH 205 A HOH 77 5 HOH HOH 206 A HOH 703 5 HOH HOH 207 A HOH 104 5 HOH HOH 208 A HOH 838 5 HOH HOH 209 A HOH 92 5 HOH HOH 210 A HOH 1 5 HOH HOH 211 A HOH 143 5 HOH HOH 212 A HOH 89 5 HOH HOH 213 A HOH 626 5 HOH HOH 214 A HOH 8 5 HOH HOH 215 A HOH 590 5 HOH HOH 216 A HOH 33 5 HOH HOH 217 A HOH 155 5 HOH HOH 218 A HOH 362 5 HOH HOH 219 A HOH 310 5 HOH HOH 220 A HOH 294 5 HOH HOH 221 A HOH 411 5 HOH HOH 222 A HOH 128 5 HOH HOH 223 A HOH 72 5 HOH HOH 224 A HOH 828 5 HOH HOH 225 A HOH 230 5 HOH HOH 226 A HOH 61 5 HOH HOH 227 A HOH 103 5 HOH HOH 228 A HOH 137 5 HOH HOH 229 A HOH 874 5 HOH HOH 230 A HOH 107 5 HOH HOH 231 A HOH 4 5 HOH HOH 232 A HOH 25 5 HOH HOH 233 A HOH 17 5 HOH HOH 234 A HOH 580 5 HOH HOH 235 A HOH 459 5 HOH HOH 236 A HOH 141 5 HOH HOH 237 A HOH 851 5 HOH HOH 238 A HOH 157 5 HOH HOH 239 A HOH 152 5 HOH HOH 240 A HOH 267 5 HOH HOH 241 A HOH 46 5 HOH HOH 242 A HOH 132 5 HOH HOH 243 A HOH 150 5 HOH HOH 244 A HOH 101 5 HOH HOH 245 A HOH 15 5 HOH HOH 246 A HOH 36 5 HOH HOH 247 A HOH 27 5 HOH HOH 248 A HOH 648 5 HOH HOH 249 A HOH 26 5 HOH HOH 250 A HOH 612 5 HOH HOH 251 A HOH 616 5 HOH HOH 252 A HOH 533 5 HOH HOH 253 A HOH 94 5 HOH HOH 254 A HOH 243 5 HOH HOH 255 A HOH 16 5 HOH HOH 256 A HOH 80 5 HOH HOH 257 A HOH 700 5 HOH HOH 258 A HOH 18 5 HOH HOH 259 A HOH 853 5 HOH HOH 260 A HOH 380 5 HOH HOH 261 A HOH 52 5 HOH HOH 262 A HOH 87 5 HOH HOH 263 A HOH 372 5 HOH HOH 264 A HOH 42 5 HOH HOH 265 A HOH 5 5 HOH HOH 266 A HOH 51 5 HOH HOH 267 A HOH 248 5 HOH HOH 268 A HOH 142 5 HOH HOH 269 A HOH 67 5 HOH HOH 270 A HOH 116 5 HOH HOH 271 A HOH 66 5 HOH HOH 272 A HOH 830 5 HOH HOH 273 A HOH 215 5 HOH HOH 274 A HOH 661 5 HOH HOH 275 A HOH 21 5 HOH HOH 276 A HOH 510 5 HOH HOH 277 A HOH 182 5 HOH HOH 278 A HOH 751 5 HOH HOH 279 A HOH 184 5 HOH HOH 280 A HOH 47 5 HOH HOH 281 A HOH 100 5 HOH HOH 282 A HOH 824 5 HOH HOH 283 A HOH 83 5 HOH HOH 284 A HOH 139 5 HOH HOH 285 A HOH 546 5 HOH HOH 286 A HOH 897 5 HOH HOH 287 A HOH 576 5 HOH HOH 288 A HOH 840 5 HOH HOH 289 A HOH 916 5 HOH HOH 290 A HOH 44 5 HOH HOH 291 A HOH 43 5 HOH HOH 292 A HOH 22 5 HOH HOH 293 A HOH 81 5 HOH HOH 294 A HOH 64 5 HOH HOH 295 A HOH 699 5 HOH HOH 296 A HOH 251 5 HOH HOH 297 A HOH 167 5 HOH HOH 298 A HOH 154 5 HOH HOH 299 A HOH 334 5 HOH HOH 300 A HOH 53 5 HOH HOH 301 A HOH 203 5 HOH HOH 302 A HOH 71 5 HOH HOH 303 A HOH 625 5 HOH HOH 304 A HOH 283 5 HOH HOH 305 A HOH 583 5 HOH HOH 306 A HOH 31 5 HOH HOH 307 A HOH 694 5 HOH HOH 308 A HOH 279 5 HOH HOH 309 A HOH 943 5 HOH HOH 310 A HOH 19 5 HOH HOH 311 A HOH 204 5 HOH HOH 312 A HOH 35 5 HOH HOH 313 A HOH 228 5 HOH HOH 314 A HOH 60 5 HOH HOH 315 A HOH 45 5 HOH HOH 316 A HOH 97 5 HOH HOH 317 A HOH 41 5 HOH HOH 318 A HOH 7 5 HOH HOH 319 A HOH 24 5 HOH HOH 320 A HOH 68 5 HOH HOH 321 A HOH 225 5 HOH HOH 322 A HOH 73 5 HOH HOH 323 A HOH 177 5 HOH HOH 324 A HOH 891 5 HOH HOH 325 A HOH 159 5 HOH HOH 326 A HOH 880 5 HOH HOH 327 A HOH 329 5 HOH HOH 328 A HOH 134 5 HOH HOH 329 A HOH 212 5 HOH HOH 330 A HOH 69 5 HOH HOH 331 A HOH 11 5 HOH HOH 332 A HOH 266 5 HOH HOH 333 A HOH 633 5 HOH HOH 334 A HOH 50 5 HOH HOH 335 A HOH 86 5 HOH HOH 336 A HOH 168 5 HOH HOH 337 A HOH 229 5 HOH HOH 338 A HOH 239 5 HOH HOH 339 A HOH 163 5 HOH HOH 340 A HOH 192 5 HOH HOH 341 A HOH 62 5 HOH HOH 342 A HOH 85 5 HOH HOH 343 A HOH 490 5 HOH HOH 344 A HOH 921 5 HOH HOH 345 A HOH 117 5 HOH HOH 346 A HOH 454 5 HOH HOH 347 A HOH 693 5 HOH HOH 348 A HOH 131 5 HOH HOH 349 A HOH 861 5 HOH HOH 350 A HOH 32 5 HOH HOH 351 A HOH 872 5 HOH HOH 352 A HOH 13 5 HOH HOH 353 A HOH 332 5 HOH HOH 354 A HOH 695 5 HOH HOH 355 A HOH 209 5 HOH HOH 356 A HOH 839 5 HOH HOH 357 A HOH 147 5 HOH HOH 358 A HOH 870 5 HOH HOH 359 A HOH 945 5 HOH HOH 360 A HOH 253 5 HOH HOH 361 A HOH 3 5 HOH HOH 362 A HOH 660 5 HOH HOH 363 A HOH 275 5 HOH HOH 364 A HOH 124 5 HOH HOH 365 A HOH 213 5 HOH HOH 366 A HOH 865 5 HOH HOH 367 A HOH 208 5 HOH HOH 368 A HOH 672 5 HOH HOH 369 A HOH 698 5 HOH HOH 370 A HOH 277 5 HOH HOH 371 A HOH 265 5 HOH HOH 372 A HOH 889 5 HOH HOH 373 A HOH 148 5 HOH HOH 374 A HOH 809 5 HOH HOH 375 A HOH 844 5 HOH HOH 376 A HOH 217 5 HOH HOH 377 A HOH 258 5 HOH HOH 378 A HOH 20 5 HOH HOH 379 A HOH 956 5 HOH HOH 380 A HOH 335 5 HOH HOH 381 A HOH 206 5 HOH HOH 382 A HOH 856 5 HOH HOH 383 A HOH 30 5 HOH HOH 384 A HOH 210 5 HOH HOH 385 A HOH 37 5 HOH HOH 386 A HOH 462 5 HOH HOH 387 A HOH 683 5 HOH HOH 388 A HOH 49 5 HOH HOH 389 A HOH 898 5 HOH HOH 390 A HOH 907 5 HOH HOH 391 A HOH 457 5 HOH HOH 392 A HOH 145 5 HOH HOH 393 A HOH 187 5 HOH HOH 394 A HOH 444 5 HOH HOH 395 A HOH 599 5 HOH HOH 396 A HOH 378 5 HOH HOH 397 A HOH 218 5 HOH HOH 398 A HOH 262 5 HOH HOH 399 A HOH 123 5 HOH HOH 400 A HOH 171 5 HOH HOH 401 A HOH 28 5 HOH HOH 402 A HOH 467 5 HOH HOH 403 A HOH 318 5 HOH HOH 404 A HOH 38 5 HOH HOH 405 A HOH 236 5 HOH HOH 406 A HOH 119 5 HOH HOH 407 A HOH 6 5 HOH HOH 408 A HOH 125 5 HOH HOH 409 A HOH 201 5 HOH HOH 410 A HOH 12 5 HOH HOH 411 A HOH 198 5 HOH HOH 412 A HOH 366 5 HOH HOH 413 A HOH 834 5 HOH HOH 414 A DT -2 n 1 DT -2 A DG -1 n 2 DG -1 A DT 0 n 3 DT 0 A DA 1 n 4 DA 1 A DC 2 n 5 DC 2 A DG 3 n 6 DG 3 A DA 4 n 7 DA 4 A DC 5 n 8 DC 5 A DA 6 n 9 DA 6 A DC 7 n 10 DC 7 A DG 8 n 11 DG 8 A DG 9 n 12 DG 9 A DA 10 n 13 DA 10 A DG 11 n 14 DG 11 A DG 12 n 15 DG 12 A DC 13 n 16 DC 13 A DT 14 n 17 DT 14 A DT 15 n 18 DT 15 A DA 16 n 19 DA 16 A DG 17 n 20 DG 17 A DT 18 n 21 DT 18 A DT 19 n 22 DT 19 A DT 20 n 23 DT 20 A DG 21 n 24 DG 21 A DC 22 n 25 DC 22 A DT 23 n 26 DT 23 A DA 24 n 27 DA 24 A DA 25 n 28 DA 25 A DA 26 n 29 DA 26 A DT 27 n 30 DT 27 A DG 28 n 31 DG 28 A DG 29 n 32 DG 29 A DT 30 n 33 DT 30 A DC 31 n 34 DC 31 A DA 32 n 35 DA 32 A DT 33 n 36 DT 33 A DG 34 n 37 DG 34 A DT 35 n 38 DT 35 A DC 36 n 39 DC 36 A DG 37 n 40 DG 37 A DT 38 n 41 DT 38 A DA 39 n 42 DA 39 A DC 40 n 43 DC 40 A DA 41 n 44 DA 41 A 0.627890554829 0.491237287448 0.938010914875 2.10062494731 2.9867010441 4.36261936608 0.0786970644227 -0.00565756990658 0.0102283605559 0.120413368421 0.112529385154 -0.226796543139 0.30275422171 -0.0318583707599 -0.156953013903 0.153218184835 -0.0116348292309 0.0225859862525 0.115667809639 0.0193282217278 0.0745055454975 refined -10.1444568461 -4.45754926982 -6.33216686166 X-RAY DIFFRACTION 1.96612963263 -1.82390626391 -3.12056003747 1.6895155284 3.00156333839 6.42568659109 -0.0780848678816 -0.149253921882 0.06415296223 0.230102846412 0.166220389931 -0.0536413403839 0.2911773738 0.242341286509 -0.0936896307341 0.132315556636 0.00507372562285 0.0172244546678 0.128944967712 0.00174684904117 0.0987865220735 refined -12.1897343997 7.04331686252 15.4432201173 X-RAY DIFFRACTION 4.48622417452 -2.63657145396 -2.98749533756 8.47172585988 5.68973334277 5.74301999682 0.267800746568 -0.176722789992 0.128838499507 -0.497814651315 -0.286880195235 0.0167999347447 -0.1625343055 -0.238828251111 0.0138662066926 0.253308773246 0.0257044227145 -0.0521038143999 0.220081892562 -0.0297941106204 0.10987663033 refined -9.51000554472 -10.9542258347 -14.2193716821 X-RAY DIFFRACTION A -2 A A 12 A X-RAY DIFFRACTION 1 chain 'A' and (resid -2 through 12 ) A 13 A A 32 A X-RAY DIFFRACTION 2 chain 'A' and (resid 13 through 32 ) A 33 A A 41 A X-RAY DIFFRACTION 3 chain 'A' and (resid 33 through 41 ) author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 1 monomeric 1310 -74 15290 120 -8 7880 A DG -1 A OP2 DG 2 1_555 A CA 102 C CA CA 4_445 A DT 20 A OP1 DT 23 1_555 56.3 A DG -1 A OP2 DG 2 1_555 A CA 102 C CA CA 4_445 A DC 22 A OP2 DC 25 1_555 45.2 A DT 20 A OP1 DT 23 1_555 A CA 102 C CA CA 4_445 A DC 22 A OP2 DC 25 1_555 11.4 A DG -1 A OP2 DG 2 1_555 A CA 102 C CA CA 4_445 A HOH 235 I O HOH 4_446 40.8 A DT 20 A OP1 DT 23 1_555 A CA 102 C CA CA 4_445 A HOH 235 I O HOH 4_446 15.6 A DC 22 A OP2 DC 25 1_555 A CA 102 C CA CA 4_445 A HOH 235 I O HOH 4_446 4.8 A DG -1 A OP2 DG 2 1_555 A CA 102 C CA CA 4_445 A HOH 355 I O HOH 1_555 44.2 A DT 20 A OP1 DT 23 1_555 A CA 102 C CA CA 4_445 A HOH 355 I O HOH 1_555 12.2 A DC 22 A OP2 DC 25 1_555 A CA 102 C CA CA 4_445 A HOH 355 I O HOH 1_555 3.2 A HOH 235 I O HOH 4_446 A CA 102 C CA CA 4_445 A HOH 355 I O HOH 1_555 3.6 A DG -1 A OP2 DG 2 1_555 A CA 102 C CA CA 4_445 A HOH 370 I O HOH 4_446 43.3 A DT 20 A OP1 DT 23 1_555 A CA 102 C CA CA 4_445 A HOH 370 I O HOH 4_446 13.1 A DC 22 A OP2 DC 25 1_555 A CA 102 C CA CA 4_445 A HOH 370 I O HOH 4_446 2.4 A HOH 235 I O HOH 4_446 A CA 102 C CA CA 4_445 A HOH 370 I O HOH 4_446 2.6 A HOH 355 I O HOH 1_555 A CA 102 C CA CA 4_445 A HOH 370 I O HOH 4_446 1.7 A DG -1 A OP1 DG 2 1_555 A CA 104 E CA CA 1_544 A DT 19 A OP2 DT 22 1_555 81.8 A DG -1 A OP1 DG 2 1_555 A CA 104 E CA CA 1_544 A DT 20 A OP2 DT 23 1_555 79.3 A DT 19 A OP2 DT 22 1_555 A CA 104 E CA CA 1_544 A DT 20 A OP2 DT 23 1_555 2.5 A DG -1 A OP1 DG 2 1_555 A CA 104 E CA CA 1_544 A DC 22 A OP1 DC 25 1_555 68.5 A DT 19 A OP2 DT 22 1_555 A CA 104 E CA CA 1_544 A DC 22 A OP1 DC 25 1_555 14.1 A DT 20 A OP2 DT 23 1_555 A CA 104 E CA CA 1_544 A DC 22 A OP1 DC 25 1_555 12.0 A DG -1 A OP1 DG 2 1_555 A CA 104 E CA CA 1_544 A HOH 308 I O HOH 1_566 79.4 A DT 19 A OP2 DT 22 1_555 A CA 104 E CA CA 1_544 A HOH 308 I O HOH 1_566 3.2 A DT 20 A OP2 DT 23 1_555 A CA 104 E CA CA 1_544 A HOH 308 I O HOH 1_566 2.7 A DC 22 A OP1 DC 25 1_555 A CA 104 E CA CA 1_544 A HOH 308 I O HOH 1_566 11.3 A DG -1 A OP1 DG 2 1_555 A CA 104 E CA CA 1_544 A HOH 348 I O HOH 1_566 79.8 A DT 19 A OP2 DT 22 1_555 A CA 104 E CA CA 1_544 A HOH 348 I O HOH 1_566 2.0 A DT 20 A OP2 DT 23 1_555 A CA 104 E CA CA 1_544 A HOH 348 I O HOH 1_566 1.2 A DC 22 A OP1 DC 25 1_555 A CA 104 E CA CA 1_544 A HOH 348 I O HOH 1_566 12.1 A HOH 308 I O HOH 1_566 A CA 104 E CA CA 1_544 A HOH 348 I O HOH 1_566 1.7 A DA 6 A OP2 DA 9 1_555 A CA 103 D CA CA 2_555 A DC 7 A O2 DC 10 1_555 82.6 A DA 6 A OP2 DA 9 1_555 A CA 103 D CA CA 2_555 A DG 29 A OP1 DG 32 1_555 71.8 A DC 7 A O2 DC 10 1_555 A CA 103 D CA CA 2_555 A DG 29 A OP1 DG 32 1_555 67.3 A DA 6 A OP2 DA 9 1_555 A CA 103 D CA CA 2_555 A HOH 274 I O HOH 2_555 81.1 A DC 7 A O2 DC 10 1_555 A CA 103 D CA CA 2_555 A HOH 274 I O HOH 2_555 70.8 A DG 29 A OP1 DG 32 1_555 A CA 103 D CA CA 2_555 A HOH 274 I O HOH 2_555 9.8 A DA 6 A OP2 DA 9 1_555 A CA 103 D CA CA 2_555 A HOH 307 I O HOH 1_555 72.7 A DC 7 A O2 DC 10 1_555 A CA 103 D CA CA 2_555 A HOH 307 I O HOH 1_555 87.8 A DG 29 A OP1 DG 32 1_555 A CA 103 D CA CA 2_555 A HOH 307 I O HOH 1_555 20.5 A HOH 274 I O HOH 2_555 A CA 103 D CA CA 2_555 A HOH 307 I O HOH 1_555 19.7 A DA 6 A OP2 DA 9 1_555 A CA 103 D CA CA 2_555 A HOH 332 I O HOH 2_555 81.7 A DC 7 A O2 DC 10 1_555 A CA 103 D CA CA 2_555 A HOH 332 I O HOH 2_555 81.0 A DG 29 A OP1 DG 32 1_555 A CA 103 D CA CA 2_555 A HOH 332 I O HOH 2_555 16.4 A HOH 274 I O HOH 2_555 A CA 103 D CA CA 2_555 A HOH 332 I O HOH 2_555 10.2 A HOH 307 I O HOH 1_555 A CA 103 D CA CA 2_555 A HOH 332 I O HOH 2_555 12.0 A DC 13 A OP2 DC 16 1_555 A NA 105 F NA NA 1_555 A DG 21 A O6 DG 24 1_555 130.8 A DC 13 A OP2 DC 16 1_555 A NA 105 F NA NA 1_555 A HOH 240 I O HOH 1_545 85.8 A DG 21 A O6 DG 24 1_555 A NA 105 F NA NA 1_555 A HOH 240 I O HOH 1_545 142.9 A DC 13 A OP2 DC 16 1_555 A NA 105 F NA NA 1_555 A HOH 246 I O HOH 4_455 94.3 A DG 21 A O6 DG 24 1_555 A NA 105 F NA NA 1_555 A HOH 246 I O HOH 4_455 41.9 A HOH 240 I O HOH 1_545 A NA 105 F NA NA 1_555 A HOH 246 I O HOH 4_455 151.3 A DC 13 A OP2 DC 16 1_555 A NA 105 F NA NA 1_555 A HOH 342 I O HOH 4_446 104.1 A DG 21 A O6 DG 24 1_555 A NA 105 F NA NA 1_555 A HOH 342 I O HOH 4_446 95.2 A HOH 240 I O HOH 1_545 A NA 105 F NA NA 1_555 A HOH 342 I O HOH 4_446 77.6 A HOH 246 I O HOH 4_455 A NA 105 F NA NA 1_555 A HOH 342 I O HOH 4_446 129.7 A DC 13 A OP2 DC 16 1_555 A NA 105 F NA NA 1_555 A HOH 376 I O HOH 4_446 93.1 A DG 21 A O6 DG 24 1_555 A NA 105 F NA NA 1_555 A HOH 376 I O HOH 4_446 93.6 A HOH 240 I O HOH 1_545 A NA 105 F NA NA 1_555 A HOH 376 I O HOH 4_446 76.8 A HOH 246 I O HOH 4_455 A NA 105 F NA NA 1_555 A HOH 376 I O HOH 4_446 74.5 A HOH 342 I O HOH 4_446 A NA 105 F NA NA 1_555 A HOH 376 I O HOH 4_446 147.9 A DT 27 A OP1 DT 30 1_555 A NA 106 G NA NA 1_555 A DA 39 A OP1 DA 42 1_555 57.4 A DT 27 A OP1 DT 30 1_555 A NA 106 G NA NA 1_555 A HOH 358 I O HOH 1_555 69.4 A DA 39 A OP1 DA 42 1_555 A NA 106 G NA NA 1_555 A HOH 358 I O HOH 1_555 39.6 A DT 27 A OP1 DT 30 1_555 A NA 106 G NA NA 1_555 A HOH 382 I O HOH 1_555 81.4 A DA 39 A OP1 DA 42 1_555 A NA 106 G NA NA 1_555 A HOH 382 I O HOH 1_555 55.1 A HOH 358 I O HOH 1_555 A NA 106 G NA NA 1_555 A HOH 382 I O HOH 1_555 93.0 A DT 27 A O2 DT 30 1_555 A NA 107 H NA NA 1_555 A DT 30 A O4 DT 33 1_555 84.5 A DT 27 A O2 DT 30 1_555 A NA 107 H NA NA 1_555 A HOH 389 I O HOH 1_555 134.8 A DT 30 A O4 DT 33 1_555 A NA 107 H NA NA 1_555 A HOH 389 I O HOH 1_555 118.3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_555 -x,y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1 A HOH 378 I HOH 1 A HOH 385 I HOH 1 A HOH 407 I HOH 1 A A O O HOH HOH 300 392 1.63 1 A A O O HOH HOH 201 310 1.75 1 A A OP1 O DG HOH 3 201 1.85 1 A A OP1 O DG HOH 9 202 1.86 1 A A O O HOH HOH 249 363 1.94 1 A A O O HOH HOH 217 297 2.00 1 A A OP2 O DC HOH 36 203 2.00 1 A A OP1 O DG HOH 8 204 2.00 1 A A O3' O DC HOH 2 201 2.00 1 A A O O HOH HOH 388 409 2.07 1 A A O O HOH HOH 240 373 2.09 1 A A O O HOH HOH 215 304 2.10 1 A A O O HOH HOH 238 326 2.12 1 A A O O HOH HOH 215 362 2.15 1 A A OP1 O DC HOH 7 205 2.19 1 2.66 0.30 108.30 110.96 A A A O4' C1' N1 DT DT DT 0 0 0 N 1 3.66 0.60 119.90 123.56 A A A N3 C4 O4 DT DT DT 0 0 0 N 1 -5.06 0.80 102.40 97.34 A A A C3' C2' C1' DC DC DC 5 5 5 N 1 1.84 0.30 108.30 110.14 A A A O4' C1' N1 DC DC DC 5 5 5 N 1 2.53 0.30 108.30 110.83 A A A O4' C1' N1 DC DC DC 7 7 7 N 1 3.79 0.30 108.30 112.09 A A A O4' C1' N9 DG DG DG 21 21 21 N 1 3.94 0.60 119.90 123.84 A A A N3 C4 O4 DT DT DT 23 23 23 N 1 2.62 0.30 108.30 110.92 A A A O4' C1' N9 DA DA DA 25 25 25 N 1 -4.19 0.50 110.60 106.41 A A A C2 N3 C4 DA DA DA 25 25 25 N 1 1.83 0.30 108.30 110.13 A A A O4' C1' N9 DG DG DG 28 28 28 N 1 3.19 0.30 108.30 111.49 A A A O4' C1' N1 DT DT DT 30 30 30 N 1 4.74 0.30 108.30 113.04 A A A O4' C1' N1 DC DC DC 31 31 31 N 1 2.02 0.30 108.30 110.32 A A A O4' C1' N1 DT DT DT 35 35 35 N 1 2.19 0.30 108.30 110.49 A A A O4' C1' N1 DT DT DT 38 38 38 N 1 A A C5 N7 DG DG 3 3 0.046 0.006 1.388 1.434 N 1 A A C6 N1 DA DA 4 4 -0.056 0.007 1.351 1.295 N 1 A A C3' C2' DA DA 6 6 0.083 0.012 1.518 1.601 N 1 A A C8 N9 DA DA 6 6 -0.054 0.008 1.373 1.319 N 1 A A N1 C6 DC DC 7 7 -0.040 0.006 1.367 1.327 N 1 A A C5 N7 DG DG 9 9 0.045 0.006 1.388 1.433 N 1 A A C5 C7 DT DT 15 15 -0.053 0.006 1.496 1.443 N 1 A A O3' C3' DT DT 20 20 -0.048 0.006 1.419 1.371 N 1 A A O3' C3' DA DA 24 24 -0.073 0.006 1.419 1.346 N 1 A A C6 N1 DA DA 25 25 -0.053 0.007 1.351 1.298 N 1 A A N9 C4 DA DA 25 25 -0.046 0.006 1.374 1.328 N 1 A A N7 C8 DG DG 28 28 0.054 0.006 1.305 1.359 N 1 A A O3' C3' DG DG 29 29 -0.053 0.006 1.419 1.366 N 1 A A P O5' DT DT 30 30 -0.060 0.010 1.593 1.533 N 1 A A N3 C4 DA DA 32 32 -0.043 0.006 1.344 1.301 N 1 A A C5 C7 DT DT 35 35 -0.048 0.006 1.496 1.448 N 1 A A C1' N1 DC DC 36 36 0.081 0.013 1.488 1.569 N 1 A A O O HOH HOH 230 274 1.83 1_555 2_555 1 A A O O HOH HOH 215 403 2.05 1_555 1_566 1 A A O O HOH HOH 241 372 2.08 1_555 1_545 1 A A O O HOH HOH 214 261 2.11 1_555 4_445 21.72 0.2165 0.1855 0.1869 1.59 51.54 718 15001 15719 4.57 98.68 0.1702 1 FREE R-VALUE 1.34 MOLECULAR REPLACEMENT 24.8399 0.9000 1.1000 GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 1.59 51.54 214 1147 29 904 0 0.0240 1039 1.7244 1603 0.0932 179 0.0243 45 33.5565 489 0.2968 0.2395 1.71 124 2933 97.05 0.3015 0.2113 1.89 147 2944 97.91 0.2824 0.2181 2.16 162 2983 99.02 0.2286 0.2108 2.72 149 3006 99.65 0.1555 0.1499 51.54 136 3135 99.76 13.65 1.59 51.54 9URV 15775 0.991 0.128 0.056 1 8.300 6.3 99.0 1.176 1.59 1.63 1137 0.339 0.572 1 refinement PHENIX 1.21.1_5286 data reduction DIALS data scaling DIALS phasing PHASER 5 monoclinic C 1 2 1 C 2y x,y,z -x,y,-z x+1/2,y+1/2,z -x+1/2,y+1/2,-z N Crystal structure of Ade1304 DNA aptamer (1304b9) bound to AMP 1 N N 2 N N 3 N N 3 N N 3 N N 4 N N 4 N N 4 N N 5 N N metalc 2.271 A DG -1 A OP2 DG 2 1_555 A CA 102 C CA CA 4_445 metalc 2.402 A DG -1 A OP1 DG 2 1_555 A CA 104 E CA CA 1_544 metalc 2.373 A DA 6 A OP2 DA 9 1_555 A CA 103 D CA CA 2_555 metalc 2.468 A DC 7 A O2 DC 10 1_555 A CA 103 D CA CA 2_555 metalc 2.192 A DC 13 A OP2 DC 16 1_555 A NA 105 F NA NA 1_555 metalc 2.354 A DT 19 A OP2 DT 22 1_555 A CA 104 E CA CA 1_555 metalc 2.299 A DT 20 A OP1 DT 23 1_555 A CA 102 C CA CA 4_456 metalc 2.264 A DT 20 A OP2 DT 23 1_555 A CA 104 E CA CA 1_555 metalc 2.277 A DG 21 A O6 DG 24 1_555 A NA 105 F NA NA 4_456 metalc 2.313 A DC 22 A OP2 DC 25 1_555 A CA 102 C CA CA 1_555 metalc 2.341 A DC 22 A OP1 DC 25 1_555 A CA 104 E CA CA 4_446 metalc 3.002 A DT 27 A OP1 DT 30 1_555 A NA 106 G NA NA 1_555 metalc 2.864 A DT 27 A O2 DT 30 1_555 A NA 107 H NA NA 1_555 metalc 2.281 A DG 29 A OP1 DG 32 1_555 A CA 103 D CA CA 1_555 metalc 2.828 A DT 30 A O4 DT 33 1_555 A NA 107 H NA NA 1_555 metalc 2.318 A DA 39 A OP1 DA 42 1_555 A NA 106 G NA NA 2_545 metalc 2.369 A CA 102 C CA CA 1_555 A HOH 235 I O HOH 4_446 metalc 2.391 A CA 102 C CA CA 1_555 A HOH 355 I O HOH 1_555 metalc 2.335 A CA 102 C CA CA 1_555 A HOH 370 I O HOH 4_446 metalc 2.395 A CA 103 D CA CA 1_555 A HOH 274 I O HOH 2_555 metalc 2.558 A CA 103 D CA CA 1_555 A HOH 307 I O HOH 1_555 metalc 2.347 A CA 103 D CA CA 1_555 A HOH 332 I O HOH 2_555 metalc 2.297 A CA 104 E CA CA 1_555 A HOH 308 I O HOH 1_566 metalc 2.371 A CA 104 E CA CA 1_555 A HOH 348 I O HOH 1_566 metalc 2.225 A NA 105 F NA NA 1_555 A HOH 240 I O HOH 1_545 metalc 2.402 A NA 105 F NA NA 1_555 A HOH 246 I O HOH 4_455 metalc 2.601 A NA 105 F NA NA 1_555 A HOH 342 I O HOH 4_446 metalc 2.527 A NA 105 F NA NA 1_555 A HOH 376 I O HOH 4_446 metalc 2.394 A NA 106 G NA NA 1_555 A HOH 358 I O HOH 1_555 metalc 2.264 A NA 106 G NA NA 1_555 A HOH 382 I O HOH 1_555 metalc 2.841 A NA 107 H NA NA 1_555 A HOH 389 I O HOH 1_555 hydrog WATSON-CRICK A DG -1 A N1 DG 2 1_555 A DC 40 A N3 DC 43 1_555 hydrog WATSON-CRICK A DG -1 A N2 DG 2 1_555 A DC 40 A O2 DC 43 1_555 hydrog WATSON-CRICK A DG -1 A O6 DG 2 1_555 A DC 40 A N4 DC 43 1_555 hydrog WATSON-CRICK A DT 0 A N3 DT 3 1_555 A DA 39 A N1 DA 42 1_555 hydrog WATSON-CRICK A DT 0 A O4 DT 3 1_555 A DA 39 A N6 DA 42 1_555 hydrog WATSON-CRICK A DA 1 A N1 DA 4 1_555 A DT 38 A N3 DT 41 1_555 hydrog WATSON-CRICK A DA 1 A N6 DA 4 1_555 A DT 38 A O4 DT 41 1_555 hydrog WATSON-CRICK A DC 2 A N3 DC 5 1_555 A DG 37 A N1 DG 40 1_555 hydrog WATSON-CRICK A DC 2 A N4 DC 5 1_555 A DG 37 A O6 DG 40 1_555 hydrog WATSON-CRICK A DC 2 A O2 DC 5 1_555 A DG 37 A N2 DG 40 1_555 hydrog WATSON-CRICK A DG 3 A N1 DG 6 1_555 A DC 36 A N3 DC 39 1_555 hydrog WATSON-CRICK A DG 3 A N2 DG 6 1_555 A DC 36 A O2 DC 39 1_555 hydrog WATSON-CRICK A DG 3 A O6 DG 6 1_555 A DC 36 A N4 DC 39 1_555 hydrog WATSON-CRICK A DA 4 A N1 DA 7 1_555 A DT 35 A N3 DT 38 1_555 hydrog WATSON-CRICK A DA 4 A N6 DA 7 1_555 A DT 35 A O4 DT 38 1_555 hydrog WATSON-CRICK A DC 5 A N3 DC 8 1_555 A DG 34 A N1 DG 37 1_555 hydrog WATSON-CRICK A DC 5 A N4 DC 8 1_555 A DG 34 A O6 DG 37 1_555 hydrog WATSON-CRICK A DC 5 A O2 DC 8 1_555 A DG 34 A N2 DG 37 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 9 1_555 A DT 33 A N3 DT 36 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 9 1_555 A DT 33 A O4 DT 36 1_555 hydrog TYPE_7_PAIR A DG 8 A N1 DG 11 1_555 A DG 29 A N7 DG 32 1_555 hydrog TYPE_7_PAIR A DG 8 A N2 DG 11 1_555 A DG 29 A O6 DG 32 1_555 hydrog TYPE_11_PAIR A DA 10 A N6 DA 13 1_555 A DG 28 A N3 DG 31 1_555 hydrog TYPE_11_PAIR A DA 10 A N7 DA 13 1_555 A DG 28 A N2 DG 31 1_555 hydrog WATSON-CRICK A DA 10 A N1 DA 13 1_555 A DT 30 A N3 DT 33 1_555 hydrog WATSON-CRICK A DA 10 A N6 DA 13 1_555 A DT 30 A O4 DT 33 1_555 hydrog DG-DC PAIR A DG 11 A N2 DG 14 1_555 A DC 13 A N3 DC 16 1_555 hydrog TYPE_28_PAIR A DG 11 A N1 DG 14 1_555 A DT 27 A O2 DT 30 1_555 hydrog TYPE_28_PAIR A DG 11 A O6 DG 14 1_555 A DT 27 A N3 DT 30 1_555 hydrog TYPE_8_PAIR A DG 12 A N1 DG 15 1_555 A DA 26 A N1 DA 29 1_555 hydrog TYPE_8_PAIR A DG 12 A O6 DG 15 1_555 A DA 26 A N6 DA 29 1_555 hydrog WATSON-CRICK A DT 14 A N3 DT 17 1_555 A DA 25 A N1 DA 28 1_555 hydrog WATSON-CRICK A DT 14 A O4 DT 17 1_555 A DA 25 A N6 DA 28 1_555 hydrog WATSON-CRICK A DT 15 A N3 DT 18 1_555 A DA 24 A N1 DA 27 1_555 hydrog WATSON-CRICK A DT 15 A O4 DT 18 1_555 A DA 24 A N6 DA 27 1_555 hydrog WATSON-CRICK A DA 16 A N1 DA 19 1_555 A DT 23 A N3 DT 26 1_555 hydrog WATSON-CRICK A DA 16 A N6 DA 19 1_555 A DT 23 A O4 DT 26 1_555 hydrog WATSON-CRICK A DG 17 A N1 DG 20 1_555 A DC 22 A N3 DC 25 1_555 hydrog WATSON-CRICK A DG 17 A N2 DG 20 1_555 A DC 22 A O2 DC 25 1_555 hydrog WATSON-CRICK A DG 17 A O6 DG 20 1_555 A DC 22 A N4 DC 25 1_555 hydrog TYPE_11_PAIR A DG 29 A N2 DG 32 1_555 A DA 32 A N7 DA 35 1_555 hydrog TYPE_11_PAIR A DG 29 A N3 DG 32 1_555 A DA 32 A N6 DA 35 1_555 DNA Adenosine/ATP DNA aptamer, AMP, DNA 9URV PDB 1 1 9URV -2 41 9URV -2 41 9URV A 1 1 44 5 C 1 2 1 C 2y