0.050854 0.000000 -0.000354 0.000000 0.036601 0.000000 0.000000 0.000000 0.044223 0.00000 0.00000 0.00000 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0.51345 0.48472 24.73122 6.32584 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.01032 2.96436 19.97189 1.75589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.49882 3.47563 15.80542 1.70748 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 5.12366 3.84317 3.49406 27.47979 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0000-0001-7924-3539 Bloch, Y. 0000-0003-1408-2214 Rayan, B. 0000-0002-0979-8165 Ragonis-Bachar, P. 0000-0002-1743-3430 Landau, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 89.601 90.000 19.664 27.322 22.613 12148.550 C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N O N 21 N O N 22 N O N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N N N 31 N C N 32 N C N 33 N O N 34 N O N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N N N 41 S C N 42 N C N 43 N O N 44 N C Y 45 N C Y 46 N N Y 47 N C Y 48 N C Y 49 N N N 50 N O N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N O N 62 N H N 63 N H N 64 N N N 65 S C N 66 N C N 67 N O N 68 S C N 69 N C N 70 N C N 71 N C N 72 N O N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N N N 87 S C N 88 N C N 89 N O N 90 N C N 91 N C N 92 N C N 93 N C N 94 N O N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N C N 116 N N N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N N N 134 S C N 135 N C N 136 N O N 137 N C Y 138 N C Y 139 N C Y 140 N C Y 141 N C Y 142 N C Y 143 N C N 144 N O N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N N N 157 S C N 158 N C N 159 N O N 160 N C N 161 N O N 162 N O N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N N N 171 S C N 172 N C N 173 N O N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N doub N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N doub N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N doub N 44 N sing N 45 N sing N 46 N sing N 47 N sing Y 48 N sing Y 49 N doub Y 50 N doub N 51 N sing Y 52 N sing N 53 N sing Y 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N doub N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing Y 137 N doub Y 138 N sing Y 139 N sing N 140 N sing Y 141 N doub N 142 N sing Y 143 N doub N 144 N sing Y 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing To Be Published 0353 A Fate Amenable To Change: Chameleon Characteristics of Antimicrobial Peptides from Wasp Venom and Frog Skin DK Acta Crystallogr., Sect. D: Biol. Crystallogr. ABCRE6 0766 0907-4449 75 861 877 10.1107/S2059798319011471 31588918 Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix 2019 UK Nat Commun 2041-1723 13 4356 10.1107/S2059798319011471 35896552 The Cryo-EM structures of two amphibian antimicrobial cross-beta amyloid fibrils. 2022 0000-0001-8519-7727 0000-0001-7924-3539 0000-0002-1743-3430 0000-0003-3921-3209 0000-0002-5052-991X 0000-0003-2492-979X 0000-0002-4871-2096 0000-0001-6690-8458 0000-0001-8857-9464 0000-0003-3107-2202 0000-0001-9633-6067 0000-0001-8273-0047 0000-0002-3311-2944 0000-0002-8346-9247 0000-0002-0623-3214 0000-0001-6384-0320 0000-0001-9333-8219 0000-0003-1000-0859 0000-0002-5200-7816 0000-0002-4788-2691 0000-0002-1743-3430 10.2210/pdb9sr1/pdb pdb_00009sr1 100 1 N PIXEL 2021-01-25 DECTRIS EIGER X 4M SINGLE WAVELENGTH M x-ray 1 0.967697 1.0 MASSIF-3 ESRF 0.967697 SYNCHROTRON ESRF BEAMLINE MASSIF-3 1800.171 Aurein-3.3 2 syn polymer 18.015 water 44 nat water no no GLFDIVKKIAGHIVSSI GLFDIVKKIAGHIVSSI A,B polypeptide(L) n n n n n n n n n n n n n n n n n 1 1.69 27.10 VAPOR DIFFUSION, HANGING DROP 0.2 M sodium thiocyanate, 20% w/v PEG 3350 293 repository Initial release 1 0 2026-10-07 European Union European Research Council (ERC) 101087140 European Union H2020 Marie Curie Actions of the European Commission 945405 Israel Israel Science Foundation 2111/20 Germany Volkswagen Foundation 76251-4659/2022 (ZN 4042) meytal.landau@cssb-hamburg.de 0000-0002-1743-3430 Landau Meytal principal investigator/group leader same peptide other crystal form same peptide, beta amyloid form N PDBE Y PDBE 2025-09-23 REL REL HOH water 116057 blue-thighed treefrog Ranoidea raniformis sample 1 17 N 1vm5 ensemble PDB experimental model HOH 14 2 HOH HOH 101 A HOH 28 2 HOH HOH 102 A HOH 40 2 HOH HOH 103 A HOH 43 2 HOH HOH 104 A HOH 36 2 HOH HOH 105 A HOH 2 2 HOH HOH 106 A HOH 15 2 HOH HOH 107 A HOH 25 2 HOH HOH 108 A HOH 19 2 HOH HOH 109 A HOH 11 2 HOH HOH 110 A HOH 29 2 HOH HOH 111 A HOH 7 2 HOH HOH 112 A HOH 39 2 HOH HOH 113 A HOH 42 2 HOH HOH 114 A HOH 44 2 HOH HOH 115 A HOH 23 2 HOH HOH 116 A HOH 24 2 HOH HOH 117 A HOH 32 2 HOH HOH 118 A HOH 38 2 HOH HOH 119 A HOH 31 2 HOH HOH 120 A HOH 21 2 HOH HOH 121 A HOH 9 2 HOH HOH 101 B HOH 27 2 HOH HOH 102 B HOH 1 2 HOH HOH 103 B HOH 16 2 HOH HOH 104 B HOH 34 2 HOH HOH 105 B HOH 17 2 HOH HOH 106 B HOH 8 2 HOH HOH 107 B HOH 6 2 HOH HOH 108 B HOH 35 2 HOH HOH 109 B HOH 12 2 HOH HOH 110 B HOH 41 2 HOH HOH 111 B HOH 10 2 HOH HOH 112 B HOH 5 2 HOH HOH 113 B HOH 3 2 HOH HOH 114 B HOH 33 2 HOH HOH 115 B HOH 37 2 HOH HOH 116 B HOH 22 2 HOH HOH 117 B HOH 26 2 HOH HOH 118 B HOH 13 2 HOH HOH 119 B HOH 20 2 HOH HOH 120 B HOH 30 2 HOH HOH 121 B HOH 18 2 HOH HOH 122 B HOH 4 2 HOH HOH 123 B GLY 1 n 1 GLY 1 A LEU 2 n 2 LEU 2 A PHE 3 n 3 PHE 3 A ASP 4 n 4 ASP 4 A ILE 5 n 5 ILE 5 A VAL 6 n 6 VAL 6 A LYS 7 n 7 LYS 7 A LYS 8 n 8 LYS 8 A ILE 9 n 9 ILE 9 A ALA 10 n 10 ALA 10 A GLY 11 n 11 GLY 11 A HIS 12 n 12 HIS 12 A ILE 13 n 13 ILE 13 A VAL 14 n 14 VAL 14 A SER 15 n 15 SER 15 A SER 16 n 16 SER 16 A ILE 17 n 17 ILE 17 A GLY 1 n 1 GLY 1 B LEU 2 n 2 LEU 2 B PHE 3 n 3 PHE 3 B ASP 4 n 4 ASP 4 B ILE 5 n 5 ILE 5 B VAL 6 n 6 VAL 6 B LYS 7 n 7 LYS 7 B LYS 8 n 8 LYS 8 B ILE 9 n 9 ILE 9 B ALA 10 n 10 ALA 10 B GLY 11 n 11 GLY 11 B HIS 12 n 12 HIS 12 B ILE 13 n 13 ILE 13 B VAL 14 n 14 VAL 14 B SER 15 n 15 SER 15 B SER 16 n 16 SER 16 B ILE 17 n 17 ILE 17 B 0.0281519850334 0.000999458036912 0.00186048785189 0.0217632767484 -0.0207078745309 0.0235952472128 -0.000322465336711 0.0225132114412 -0.0294413611519 0.0239213940222 -0.000143858362034 -0.0710223638611 -0.0310442542052 0.0484738526063 0.0183055891022 0.0750921477347 -0.0190238968933 -0.0409232362524 0.0618950950959 0.0123733033681 0.150965556526 refined 7.52203517653 13.3130756787 5.06587414209 X-RAY DIFFRACTION 0.012134671344 -0.00601633395355 -0.0170596471398 0.017297509971 0.00890832234645 0.0311939289694 0.0139372222311 0.0303136652353 0.015777660154 0.0210802504757 -0.049434048475 -0.0298278959771 0.0229799280878 0.0219417263359 -0.00239996910409 0.0756732843519 -0.00530489850384 -0.019595300238 0.0581235567598 0.00815850482157 0.16318540554 refined -2.31193466429 20.2603691112 5.18886494491 X-RAY DIFFRACTION A 1 A 1 A 17 A 17 X-RAY DIFFRACTION 1 chain A B 1 B 1 B 17 B 17 X-RAY DIFFRACTION 2 chain B 0.1700 author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A O O HOH HOH 114 119 2.09 1 A A O O HOH HOH 101 102 2.10 1 B B O O HOH HOH 102 109 2.19 1 A B O O HOH HOH 117 120 2.08 1_555 1_655 11.86 0.1729 0.1374 0.1432 1.45 22.61 427 3785 4212 10.14 96.45 1 FREE R-VALUE 1.43 MOLECULAR REPLACEMENT 20.9338 0.9000 1.1000 GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 1.45 22.61 44 298 0 0 254 0.0025 279 0.4180 378 0.0401 48 0.0013 46 9.1613 100 d_2 A A ens_1 X-RAY DIFFRACTION Torsion NCS 0.838405238927 0.2172 0.1803 1.66 136 1248 86.61 0.1740 0.1604 2.09 143 1270 87.89 0.1551 0.1224 22.61 142 1273 85.96 1.45 22.61 9SR1 4214 0.996 0.1 0.112 1 11.1 5.5 96.32 0.054 3.92 22.62 37.2 227 0.992 1 5.5 95.78 0.58 1.45 1.47 1.4 181 0.779 1 5.0 86.6 refinement PHENIX 1.21.2_5419 data reduction DIALS 3.8 data scaling DIALS 3.8 phasing PHASER 2.8.3 4 monoclinic P 1 21 1 P 2yb x,y,z -x,y+1/2,-z N helical Aurein 3.3, mP form 1 N N 1 N N 2 N N 2 N N A GLY 1 A GLY 1 HELX_P A ILE 17 A ILE 17 1 AA1 17 B LEU 2 B LEU 2 HELX_P B ILE 17 B ILE 17 1 AA2 16 ANTIMICROBIAL PROTEIN amyloid, chimera, helical, ANTIMICROBIAL PROTEIN (chain "A" and (resid 1 through 4 or resid 6 through 14 or resid 16 through 17)) (chain "B" and (resid 1 through 4 or resid 6 through 14 or resid 16 through 17)) A GLY 1 A GLY 1 A ASP 4 A ASP 4 A VAL 6 A VAL 6 A VAL 14 A VAL 14 A SER 16 A SER 16 A ILE 17 A ILE 17 B GLY 1 B GLY 1 B ASP 4 B ASP 4 B VAL 6 B VAL 6 B VAL 14 B VAL 14 B SER 16 B SER 16 B ILE 17 B ILE 17 given -0.997419472433 -0.0168061438413 0.0697993520143 0.0164494545483 -0.999848554309 -0.00568189151373 0.0698842718893 -0.00451906796758 0.997544869451 5.03189137749 33.0119022322 -0.0846814735426 AUR33_RANRN UNP 1 1 P82396 GLFDIVKKIAGHIVSSI 1 17 9SR1 1 17 P82396 A 1 1 17 1 17 9SR1 1 17 P82396 B 1 1 17 4 P 1 21 1 P 2yb