0.022040 0.001514 0.008668 0.000000 0.015500 0.007254 0.000000 0.000000 0.017331 0.000000 0.000000 0.000000 Morgunova, E. Yin, Y. Popov, A. Taipale, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 112.370 108.110 93.930 45.373 64.669 67.028 C10 H16 N3 O8 P 337.223 n 2'-deoxy-5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) DNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 N C N 6 R C N 7 N O N 8 S C N 9 N O N 10 N C N 11 R C N 12 N N N 13 N C N 14 N O N 15 N N N 16 N C N 17 N N N 18 N C N 19 N C N 20 N O N 21 N C N 22 N O N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N N N 40 S C N 41 N C N 42 N O N 43 N C N 44 N O N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N N N 53 S C N 54 N C N 55 N O N 56 N C N 57 N C N 58 N C N 59 N N N 60 N C N 61 N N N 62 N N N 63 N O N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N N N 80 S C N 81 N C N 82 N O N 83 N C N 84 N C N 85 N O N 86 N N N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N N N 97 S C N 98 N C N 99 N O N 100 N C N 101 N C N 102 N O N 103 N O N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N O N 113 N P N 114 N O N 115 N O N 116 N O N 117 N C N 118 R C N 119 N O N 120 S C N 121 N O N 122 N C N 123 R C Y 124 N N Y 125 N C Y 126 N N Y 127 N C Y 128 N C N 129 N N Y 130 N N Y 131 N C Y 132 N N Y 133 N C N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N O N 149 N P N 150 N O N 151 N O N 152 N O N 153 N C N 154 R C N 155 N O N 156 S C N 157 N O N 158 N C N 159 R C N 160 N N N 161 N C N 162 N O N 163 N N N 164 N C N 165 N N N 166 N C N 167 N C N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N O N 183 N P N 184 N O N 185 N O N 186 N O N 187 N C N 188 R C N 189 N O N 190 S C N 191 N O N 192 N C N 193 R C Y 194 N N Y 195 N C Y 196 N N Y 197 N C N 198 N C N 199 N O N 200 N N N 201 N C N 202 N N N 203 N N Y 204 N C N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N O N 220 N P N 221 N O N 222 N O N 223 N O N 224 N C N 225 R C N 226 N O N 227 S C N 228 N O N 229 N C N 230 R C N 231 N N N 232 N C N 233 N O N 234 N N N 235 N C N 236 N O N 237 N C N 238 N C N 239 N C N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N N N 256 S C N 257 N C N 258 N O N 259 N C N 260 N C N 261 N C N 262 N O N 263 N N N 264 N O N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N N N 276 S C N 277 N C N 278 N O N 279 N C N 280 N C N 281 N C N 282 N O N 283 N O N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 N C N 296 N C N 297 N O N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C Y 309 N C Y 310 N N Y 311 N C Y 312 N C Y 313 N N N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N O N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 S C N 333 N C N 334 N C N 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 N C N 355 N C N 356 N C N 357 N C N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N C N 380 N N N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N N N 398 S C N 399 N C N 400 N O N 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N C N 408 N O N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N N N 421 S C N 422 N C N 423 N O N 424 N C N 425 N O N 426 N O N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N N N 435 S C N 436 N C N 437 N O N 438 R C N 439 N O N 440 N C N 441 N O N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N N N 452 S C N 453 N C N 454 N O N 455 N C Y 456 N C Y 457 N C Y 458 N C Y 459 N N Y 460 N C Y 461 N C Y 462 N C Y 463 N C Y 464 N C N 465 N O N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N N N 479 S C N 480 N C N 481 N O N 482 N C Y 483 N C Y 484 N C Y 485 N C Y 486 N C Y 487 N C Y 488 N C N 489 N O N 490 N O N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N N N 503 S C N 504 N C N 505 N O N 506 N C N 507 N C N 508 N C N 509 N O N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N doub N 13 N sing N 14 N sing N 15 N doub N 16 N sing N 17 N doub N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing Y 132 N sing Y 133 N sing Y 134 N doub N 135 N sing Y 136 N sing Y 137 N sing Y 138 N doub N 139 N sing Y 140 N doub N 141 N sing N 142 N sing Y 143 N sing Y 144 N doub N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing Y 205 N sing Y 206 N sing Y 207 N doub N 208 N sing Y 209 N sing N 210 N sing Y 211 N doub N 212 N doub N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N doub N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing Y 315 N sing Y 316 N doub Y 317 N doub N 318 N sing Y 319 N sing N 320 N sing Y 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N doub N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N doub N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N doub N 400 N sing N 401 N sing N 402 N sing N 403 N sing Y 404 N doub Y 405 N sing Y 406 N sing N 407 N sing Y 408 N doub N 409 N sing Y 410 N doub N 411 N sing Y 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N doub N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N doub N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N doub N 452 N sing N 453 N sing N 454 N sing N 455 N sing Y 456 N doub Y 457 N sing Y 458 N sing N 459 N sing Y 460 N doub Y 461 N sing Y 462 N sing N 463 N sing Y 464 N sing Y 465 N doub N 466 N sing Y 467 N doub N 468 N sing Y 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N doub N 480 N sing N 481 N sing N 482 N sing N 483 N sing Y 484 N doub Y 485 N sing Y 486 N sing N 487 N sing Y 488 N doub N 489 N sing Y 490 N doub N 491 N sing Y 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N doub N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing To Be Published 0353 Structure of CDX1 bound to hydroxymethylated DNA 10.2210/pdb7q3o/pdb pdb_00007q3o 100 1 N PIXEL 2018-10-20 DECTRIS PILATUS 6M SINGLE WAVELENGTH M x-ray 1 0.972420 1.0 ID23-1 ESRF 0.972420 SYNCHROTRON ESRF BEAMLINE ID23-1 5503.560 hydroxymethylated DNA (18-MER) 4 syn polymer 5556.660 hydroxymethylated DNA (18-MER) 4 syn polymer 8145.416 Homeobox protein CDX-1 4 man polymer 18.015 water 70 nat water Caudal-type homeobox protein 1 no no (DT)(DT)(DG)(DT)(DG)(DT)(DT)(DT)(DT)(DA)(DT)(DG)(DA)(DC)(DG)(DT)(DC)(DC) TTGTGTTTTATGACGTCC A,B,D,F polydeoxyribonucleotide no yes (DG)(DG)(DA)(DC)(DG)(DT)(5HC)(DA)(DT)(DA)(DA)(DA)(DA)(DC)(DA)(DC)(DA)(DA) GGACGTXATAAAACACAA H,I,J,L polydeoxyribonucleotide no no TRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK TRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK K,C,E,G polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human pETG20A-SBP sample 1 65 CDX1 9606 Homo sapiens 562 Escherichia coli Biological sequence pETG20A 1 2.19 43.93 VAPOR DIFFUSION, SITTING DROP 8.0 PEG 3350, potassium chloride, magnesium chloride, PEG 200, Tris 298 -3.626 1 20 A 1 H 18 1.590 A_DT1:DA18_H 1 -6.604 0.212 -0.088 -0.152 -7.795 A 2 H 17 -108.597 A_DT2:DA17_H 2 -0.865 -0.684 0.341 3.975 -7.189 1 19 A 3 H 16 -1.281 A_DG3:DC16_H 3 -1.450 0.189 -0.165 -0.031 2.050 1 20 A 4 H 15 -0.771 A_DT4:DA15_H 4 -7.422 -0.255 0.057 -0.103 1.501 1 19 A 5 H 14 -0.724 A_DG5:DC14_H 5 -8.363 -0.390 -0.087 -0.137 -2.050 1 20 A 6 H 13 -0.267 A_DT6:DA13_H 6 -12.023 0.048 -0.134 -0.135 -6.046 1 20 A 7 H 12 -0.564 A_DT7:DA12_H 7 -10.928 0.097 0.095 -0.147 -11.191 1 20 A 8 H 11 -0.891 A_DT8:DA11_H 8 -7.897 0.094 0.313 -0.135 -9.819 1 20 A 9 H 10 0.547 A_DT9:DA10_H 9 -4.543 0.213 0.228 -0.139 -8.903 1 20 A 10 H 9 2.144 A_DA10:DT9_H 10 0.946 0.446 0.380 -0.140 -6.144 1 20 A 11 H 8 1.161 A_DT11:DA8_H 11 5.417 -0.074 0.409 -0.120 -0.907 1 19 A 12 H 7 1.829 A_DG12:5HC7_H 12 -5.301 -0.620 0.174 -0.145 7.224 1 20 A 13 H 6 -0.435 A_DA13:DT6_H 13 -4.779 -0.319 0.417 -0.192 3.352 1 19 A 14 H 5 -0.673 A_DC14:DG5_H 14 -6.419 -0.086 0.229 -0.067 -2.872 1 19 A 15 H 4 -0.735 A_DG15:DC4_H 15 -4.363 -0.484 0.280 -0.179 -4.126 1 20 A 16 H 3 -0.797 A_DT16:DA3_H 16 -3.827 -0.605 0.166 -0.090 -7.129 1 19 A 17 H 2 -2.326 A_DC17:DG2_H 17 -2.350 0.065 0.283 -0.072 -2.530 1 20 B 1 I 18 1.811 B_DT1:DA18_I 18 -7.353 0.214 -0.086 -0.143 -8.658 B 2 I 17 -108.225 B_DT2:DA17_I 19 -1.569 -0.682 0.353 3.941 -7.740 1 19 B 3 I 16 -1.239 B_DG3:DC16_I 20 -1.458 0.199 -0.196 -0.030 2.002 1 20 B 4 I 15 -0.343 B_DT4:DA15_I 21 -7.996 -0.209 0.044 -0.099 0.900 1 19 B 5 I 14 -0.329 B_DG5:DC14_I 22 -8.302 -0.400 -0.100 -0.143 -2.805 1 20 B 6 I 13 0.614 B_DT6:DA13_I 23 -11.397 0.061 -0.144 -0.124 -6.619 1 20 B 7 I 12 -0.097 B_DT7:DA12_I 24 -10.493 0.116 0.090 -0.139 -11.783 1 20 B 8 I 11 -0.287 B_DT8:DA11_I 25 -6.922 0.100 0.313 -0.124 -9.836 1 20 B 9 I 10 0.460 B_DT9:DA10_I 26 -3.496 0.154 0.240 -0.126 -8.037 1 20 B 10 I 9 1.991 B_DA10:DT9_I 27 1.994 0.421 0.387 -0.124 -5.578 1 20 B 11 I 8 1.257 B_DT11:DA8_I 28 6.385 -0.081 0.428 -0.121 -1.387 1 19 B 12 I 7 2.056 B_DG12:5HC7_I 29 -4.768 -0.638 0.216 -0.147 6.554 1 20 B 13 I 6 -1.041 B_DA13:DT6_I 30 -3.944 -0.323 0.416 -0.208 3.069 1 19 B 14 I 5 -0.719 B_DC14:DG5_I 31 -5.147 -0.096 0.223 -0.056 -1.122 1 19 B 15 I 4 -1.105 B_DG15:DC4_I 32 -4.229 -0.515 0.268 -0.176 -2.178 1 20 B 16 I 3 -0.618 B_DT16:DA3_I 33 -3.883 -0.685 0.094 -0.122 -5.268 1 19 B 17 I 2 -1.128 B_DC17:DG2_I 34 -3.166 0.010 0.262 -0.082 -2.750 1 20 D 1 J 18 1.445 D_DT1:DA18_J 35 -7.458 0.205 -0.118 -0.151 -8.899 D 2 J 17 -108.976 D_DT2:DA17_J 36 -1.275 -0.661 0.326 3.941 -7.578 1 19 D 3 J 16 -1.501 D_DG3:DC16_J 37 -1.339 0.209 -0.213 -0.035 2.170 1 20 D 4 J 15 -0.564 D_DT4:DA15_J 38 -7.511 -0.215 0.023 -0.105 1.562 1 19 D 5 J 14 -0.137 D_DG5:DC14_J 39 -7.433 -0.421 -0.095 -0.145 -1.931 1 20 D 6 J 13 0.894 D_DT6:DA13_J 40 -11.317 0.039 -0.146 -0.131 -5.889 1 20 D 7 J 12 0.860 D_DT7:DA12_J 41 -10.408 0.095 0.082 -0.145 -11.670 1 20 D 8 J 11 0.484 D_DT8:DA11_J 42 -6.968 0.105 0.334 -0.133 -9.836 1 20 D 9 J 10 0.753 D_DT9:DA10_J 43 -3.200 0.162 0.255 -0.126 -8.103 1 20 D 10 J 9 2.151 D_DA10:DT9_J 44 1.909 0.422 0.389 -0.135 -5.522 1 20 D 11 J 8 0.729 D_DT11:DA8_J 45 6.396 -0.083 0.419 -0.131 -1.137 1 19 D 12 J 7 1.775 D_DG12:5HC7_J 46 -4.848 -0.631 0.203 -0.143 7.314 1 20 D 13 J 6 -1.046 D_DA13:DT6_J 47 -3.919 -0.345 0.427 -0.201 3.827 1 19 D 14 J 5 -1.056 D_DC14:DG5_J 48 -5.640 -0.102 0.216 -0.068 -1.512 1 19 D 15 J 4 -1.255 D_DG15:DC4_J 49 -4.941 -0.526 0.273 -0.198 -3.096 1 20 D 16 J 3 -0.661 D_DT16:DA3_J 50 -4.258 -0.653 0.112 -0.118 -6.552 1 19 D 17 J 2 -1.327 D_DC17:DG2_J 51 -2.617 0.045 0.257 -0.077 -2.855 1 20 F 1 L 18 1.146 F_DT1:DA18_L 52 -6.863 0.203 -0.121 -0.148 -7.722 F 2 L 17 -108.605 F_DT2:DA17_L 53 -1.828 -0.682 0.297 3.979 -6.937 1 19 F 3 L 16 -1.346 F_DG3:DC16_L 54 -2.381 0.184 -0.174 -0.029 2.059 1 20 F 4 L 15 -0.284 F_DT4:DA15_L 55 -9.004 -0.217 0.059 -0.089 0.378 1 19 F 5 L 14 -0.409 F_DG5:DC14_L 56 -9.020 -0.371 -0.109 -0.127 -3.120 1 20 F 6 L 13 0.213 F_DT6:DA13_L 57 -11.902 0.086 -0.145 -0.120 -6.648 1 20 F 7 L 12 -0.704 F_DT7:DA12_L 58 -10.792 0.090 0.080 -0.134 -11.330 1 20 F 8 L 11 -0.972 F_DT8:DA11_L 59 -7.769 0.077 0.321 -0.132 -9.710 1 20 F 9 L 10 0.510 F_DT9:DA10_L 60 -4.163 0.165 0.250 -0.118 -7.912 1 20 F 10 L 9 1.850 F_DA10:DT9_L 61 0.747 0.439 0.376 -0.125 -5.494 1 20 F 11 L 8 0.677 F_DT11:DA8_L 62 4.699 -0.095 0.397 -0.130 -1.449 1 19 F 12 L 7 1.737 F_DG12:5HC7_L 63 -5.676 -0.610 0.166 -0.150 6.380 1 20 F 13 L 6 -1.170 F_DA13:DT6_L 64 -4.605 -0.303 0.387 -0.202 2.786 1 19 F 14 L 5 -0.503 F_DC14:DG5_L 65 -5.996 -0.089 0.230 -0.064 -2.358 1 19 F 15 L 4 -0.686 F_DG15:DC4_L 66 -4.277 -0.490 0.277 -0.181 -3.846 1 20 F 16 L 3 -0.471 F_DT16:DA3_L 67 -3.622 -0.628 0.149 -0.098 -6.237 1 19 F 17 L 2 -1.581 F_DC17:DG2_L 68 -1.620 0.083 0.266 -0.073 3.237 77.327 A A 1 2 0.235 H H 18 17 3.241 0.294 -0.140 -1.246 AA_DT1DT2:DA17DA18_HH 1 -0.207 0.166 77.326 -1.006 0.106 3.306 2.942 A A 2 3 4.388 H H 17 16 3.431 0.223 1.053 3.293 AA_DT2DG3:DC16DA17_HH 2 -0.722 14.229 2.843 59.088 -36.880 3.016 19.723 A A 3 4 9.145 H H 16 15 3.116 3.091 -0.317 -0.326 AA_DG3DT4:DA15DC16_HH 3 -4.583 13.558 18.940 -2.369 -1.177 3.313 40.728 A A 4 5 0.082 H H 15 14 3.311 0.057 0.131 0.467 AA_DT4DG5:DC14DA15_HH 4 0.549 -0.789 40.724 0.665 -0.126 3.301 36.673 A A 5 6 -0.143 H H 14 13 3.299 -0.090 0.079 -0.599 AA_DG5DT6:DA13DC14_HH 5 0.278 -0.442 36.672 -0.940 -0.087 3.436 36.288 A A 6 7 -1.255 H H 13 12 3.423 -0.781 -0.214 -0.528 AA_DT6DT7:DA12DA13_HH 6 -0.524 0.841 36.276 -0.733 0.267 3.294 40.577 A A 7 8 2.007 H H 12 11 3.300 1.392 0.235 -0.029 AA_DT7DT8:DA11DA12_HH 7 -0.561 0.809 40.550 -0.198 -0.401 3.190 33.962 A A 8 9 6.090 H H 11 10 3.231 3.551 -0.221 -0.191 AA_DT8DT9:DA10DA11_HH 8 0.788 -1.352 33.772 -0.886 0.503 3.043 34.373 A A 9 10 10.440 H H 10 9 3.184 6.138 1.085 -0.667 AA_DT9DA10:DT9DA10_HH 9 0.749 -1.275 33.829 -2.049 -1.724 3.057 27.191 A A 10 11 3.190 H H 9 8 3.165 1.498 -0.635 -1.102 AA_DA10DT11:DA8DT9_HH 10 1.668 -3.552 27.100 -2.703 1.751 3.355 34.872 A A 11 12 17.436 H H 8 7 3.320 10.302 -0.003 0.608 AA_DT11DG12:5HC7DA8_HH 11 0.238 -0.403 33.360 -0.618 0.043 3.109 35.324 A A 12 13 2.958 H H 7 6 3.094 1.786 -0.557 -0.630 AA_DG12DA13:DT65HC7_HH 12 -6.251 10.356 34.740 -1.291 0.034 3.336 30.895 A A 13 14 2.643 H H 6 5 3.397 1.407 0.390 -0.963 AA_DA13DC14:DG5DT6_HH 13 -1.073 2.016 30.846 -2.088 -0.946 3.121 38.052 A A 14 15 3.634 H H 5 4 3.186 2.368 0.307 -1.116 AA_DC14DG15:DC4DG5_HH 14 1.161 -1.781 37.964 -2.002 -0.328 3.343 29.673 A A 15 16 -0.056 H H 4 3 3.369 -0.029 -0.570 -0.707 AA_DG15DT16:DA3DC4_HH 15 1.278 -2.496 29.646 -1.374 1.389 3.332 41.097 A A 16 17 -2.068 H H 3 2 3.318 -1.451 0.407 -0.368 AA_DT16DC17:DG2DA3_HH 16 0.351 -0.500 41.071 -0.365 -0.541 3.247 77.875 B B 1 2 0.184 I I 18 17 3.250 0.231 -0.116 -1.258 BB_DT1DT2:DA17DA18_II 17 -0.140 0.111 77.875 -1.007 0.088 3.075 3.089 B B 2 3 1.589 I I 17 16 3.451 0.084 1.029 3.288 BB_DT2DG3:DC16DA17_II 18 -0.922 17.380 2.947 59.302 -37.590 2.990 19.614 B B 3 4 10.138 I I 16 15 3.104 3.401 -0.343 -0.328 BB_DG3DT4:DA15DC16_II 19 -4.820 14.367 18.714 -2.535 -1.221 3.334 39.985 B B 4 5 1.690 I I 15 14 3.323 1.155 0.098 0.432 BB_DT4DG5:DC14DA15_II 20 0.189 -0.276 39.969 0.497 -0.121 3.304 36.232 B B 5 6 0.578 I I 14 13 3.310 0.359 0.078 -0.609 BB_DG5DT6:DA13DC14_II 21 0.360 -0.579 36.228 -1.030 -0.074 3.440 35.726 B B 6 7 -0.629 I I 13 12 3.433 -0.386 -0.221 -0.547 BB_DT6DT7:DA12DA13_II 22 -0.290 0.472 35.723 -0.833 0.317 3.310 40.250 B B 7 8 1.522 I I 12 11 3.315 1.047 0.229 -0.041 BB_DT7DT8:DA11DA12_II 23 -0.507 0.737 40.234 -0.180 -0.391 3.209 32.907 B B 8 9 5.106 I I 11 10 3.244 2.889 -0.287 -0.192 BB_DT8DT9:DA10DA11_II 24 0.713 -1.260 32.776 -0.827 0.627 3.076 33.587 B B 9 10 8.645 I I 10 9 3.192 4.978 1.053 -0.665 BB_DT9DA10:DT9DA10_II 25 0.442 -0.768 33.224 -1.937 -1.752 3.081 26.896 B B 10 11 3.422 I I 9 8 3.189 1.590 -0.644 -1.109 BB_DA10DT11:DA8DT9_II 26 1.471 -3.167 26.810 -2.775 1.747 3.381 34.591 B B 11 12 19.591 I I 8 7 3.358 11.442 -0.041 0.625 BB_DT11DG12:5HC7DA8_II 27 -0.110 0.189 32.698 -0.822 0.050 3.120 34.924 B B 12 13 3.810 I I 7 6 3.111 2.274 -0.590 -0.625 BB_DG12DA13:DT65HC7_II 28 -5.980 10.017 34.351 -1.372 0.114 3.341 29.881 B B 13 14 3.009 I I 6 5 3.410 1.551 0.406 -0.965 BB_DA13DC14:DG5DT6_II 29 -1.060 2.057 29.823 -2.203 -1.014 3.079 36.649 B B 14 15 4.382 I I 5 4 3.163 2.753 0.304 -1.136 BB_DC14DG15:DC4DG5_II 30 1.051 -1.674 36.534 -2.167 -0.346 3.321 29.077 B B 15 16 0.838 I I 4 3 3.365 0.420 -0.547 -0.720 BB_DG15DT16:DA3DC4_II 31 1.584 -3.156 29.032 -1.529 1.445 3.331 40.710 B B 16 17 -1.312 I I 3 2 3.324 -0.912 0.449 -0.390 BB_DT16DC17:DG2DA3_II 32 -0.015 0.022 40.701 -0.458 -0.647 3.250 78.018 D D 1 2 0.118 J J 18 17 3.252 0.149 -0.097 -1.236 DD_DT1DT2:DA17DA18_JJ 33 -0.100 0.079 78.018 -0.986 0.075 2.468 2.811 D D 2 3 -6.444 J J 17 16 3.443 -0.309 1.056 3.279 DD_DT2DG3:DC16DA17_JJ 34 -0.990 20.676 2.613 73.695 -43.521 3.005 19.576 D D 3 4 9.179 J J 16 15 3.110 3.076 -0.326 -0.328 DD_DG3DT4:DA15DC16_JJ 35 -4.827 14.403 18.728 -2.397 -1.287 3.333 39.816 D D 4 5 0.398 J J 15 14 3.330 0.271 0.127 0.451 DD_DT4DG5:DC14DA15_JJ 36 -0.040 0.058 39.815 0.630 -0.191 3.303 36.130 D D 5 6 0.700 J J 14 13 3.309 0.434 0.096 -0.611 DD_DG5DT6:DA13DC14_JJ 37 0.270 -0.436 36.127 -1.046 -0.116 3.437 35.585 D D 6 7 -0.075 J J 13 12 3.435 -0.046 -0.181 -0.549 DD_DT6DT7:DA12DA13_JJ 38 -0.320 0.523 35.584 -0.891 0.247 3.324 40.584 D D 7 8 2.168 J J 12 11 3.333 1.503 0.250 -0.047 DD_DT7DT8:DA11DA12_JJ 39 -0.674 0.972 40.552 -0.239 -0.436 3.204 32.999 D D 8 9 5.919 J J 11 10 3.248 3.356 -0.286 -0.197 DD_DT8DT9:DA10DA11_JJ 40 0.812 -1.431 32.823 -0.910 0.639 3.065 33.762 D D 9 10 9.406 J J 10 9 3.192 5.440 1.058 -0.664 DD_DT9DA10:DT9DA10_JJ 41 0.554 -0.958 33.329 -1.993 -1.736 3.079 27.007 D D 10 11 3.300 J J 9 8 3.189 1.540 -0.653 -1.110 DD_DA10DT11:DA8DT9_JJ 42 1.610 -3.451 26.916 -2.753 1.792 3.373 34.821 D D 11 12 19.205 J J 8 7 3.353 11.297 -0.039 0.605 DD_DT11DG12:5HC7DA8_JJ 43 -0.209 0.355 32.991 -0.808 0.032 3.102 34.744 D D 12 13 3.906 J J 7 6 3.095 2.319 -0.584 -0.643 DD_DG12DA13:DT65HC7_JJ 44 -6.268 10.559 34.114 -1.416 0.062 3.322 30.520 D D 13 14 3.508 J J 6 5 3.400 1.845 0.395 -0.966 DD_DA13DC14:DG5DT6_JJ 45 -1.032 1.963 30.448 -2.212 -0.962 3.073 37.361 D D 14 15 5.222 J J 5 4 3.174 3.341 0.320 -1.111 DD_DC14DG15:DC4DG5_JJ 46 0.987 -1.543 37.204 -2.156 -0.376 3.331 29.686 D D 15 16 0.866 J J 4 3 3.374 0.444 -0.520 -0.712 DD_DG15DT16:DA3DC4_JJ 47 1.575 -3.075 29.642 -1.485 1.354 3.342 41.035 D D 16 17 -1.595 J J 3 2 3.331 -1.118 0.448 -0.385 DD_DT16DC17:DG2DA3_JJ 48 0.197 -0.281 41.020 -0.425 -0.617 3.232 77.404 F F 1 2 0.237 L L 18 17 3.235 0.296 -0.114 -1.265 FF_DT1DT2:DA17DA18_LL 49 -0.198 0.158 77.403 -1.020 0.085 3.646 3.146 F F 2 3 11.673 L L 17 16 3.429 0.630 1.040 3.271 FF_DT2DG3:DC16DA17_LL 50 -0.781 14.481 2.982 46.336 -35.372 2.972 20.043 F F 3 4 11.303 L L 16 15 3.103 3.872 -0.331 -0.330 FF_DG3DT4:DA15DC16_LL 51 -4.743 13.844 19.094 -2.660 -1.143 3.331 40.244 F F 4 5 2.559 L L 15 14 3.314 1.760 0.127 0.439 FF_DT4DG5:DC14DA15_LL 52 0.695 -1.011 40.201 0.436 -0.105 3.283 36.679 F F 5 6 0.360 L L 14 13 3.286 0.227 0.077 -0.626 FF_DG5DT6:DA13DC14_LL 53 0.451 -0.717 36.676 -1.026 -0.061 3.420 35.811 F F 6 7 -1.126 L L 13 12 3.408 -0.692 -0.246 -0.551 FF_DT6DT7:DA12DA13_LL 54 -0.320 0.521 35.803 -0.792 0.351 3.286 40.642 F F 7 8 1.379 L L 12 11 3.292 0.958 0.234 -0.031 FF_DT7DT8:DA11DA12_LL 55 -0.755 1.088 40.624 -0.152 -0.421 3.191 33.522 F F 8 9 5.660 L L 11 10 3.229 3.259 -0.246 -0.191 FF_DT8DT9:DA10DA11_LL 56 0.661 -1.148 33.361 -0.858 0.533 3.028 34.036 F F 9 10 10.271 L L 10 9 3.168 5.983 1.043 -0.662 FF_DT9DA10:DT9DA10_LL 57 0.685 -1.176 33.515 -2.042 -1.678 3.066 27.255 F F 10 11 3.067 L L 9 8 3.168 1.444 -0.647 -1.094 FF_DA10DT11:DA8DT9_LL 58 1.560 -3.313 27.173 -2.666 1.746 3.376 35.042 F F 11 12 17.390 L L 8 7 3.341 10.325 -0.035 0.611 FF_DT11DG12:5HC7DA8_LL 59 0.038 -0.064 33.532 -0.616 0.064 3.129 35.046 F F 12 13 2.641 L L 7 6 3.105 1.582 -0.585 -0.616 FF_DG12DA13:DT65HC7_LL 60 -5.904 9.852 34.526 -1.251 0.119 3.343 30.524 F F 13 14 2.154 L L 6 5 3.397 1.134 0.411 -0.947 FF_DA13DC14:DG5DT6_LL 61 -1.127 2.142 30.483 -2.031 -1.012 3.117 37.584 F F 14 15 3.156 L L 5 4 3.170 2.032 0.315 -1.098 FF_DC14DG15:DC4DG5_LL 62 1.213 -1.884 37.512 -1.959 -0.337 3.355 29.856 F F 15 16 -0.395 L L 4 3 3.378 -0.204 -0.543 -0.710 FF_DG15DT16:DA3DC4_LL 63 1.343 -2.607 29.826 -1.334 1.342 3.331 41.046 F F 16 17 -2.222 L L 3 2 3.317 -1.558 0.430 -0.378 FF_DT16DC17:DG2DA3_LL 64 0.217 -0.310 41.017 -0.368 -0.589 chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Data collection Refinement description 1 0 2022-11-16 1 1 2024-01-31 Not funded ajt208@cam.ac.uk 0000-0003-4204-0951 Jussi Taipale principal investigator/group leader N PDBE Y PDBE 2021-10-28 REL REL 5HC 5HC SUBJECT OF INVESTIGATION HOH water 32630 synthetic construct sample 1 18 32630 synthetic construct sample 1 18 Y 5LUX PDB experimental model HOH 13 4 HOH HOH 101 A HOH 2 4 HOH HOH 102 A HOH 26 4 HOH HOH 103 A HOH 55 4 HOH HOH 104 A HOH 27 4 HOH HOH 105 A HOH 1 4 HOH HOH 101 H HOH 33 4 HOH HOH 102 H HOH 4 4 HOH HOH 103 H HOH 51 4 HOH HOH 104 H HOH 5 4 HOH HOH 105 H HOH 19 4 HOH HOH 101 B HOH 46 4 HOH HOH 102 B HOH 40 4 HOH HOH 103 B HOH 28 4 HOH HOH 104 B HOH 64 4 HOH HOH 101 I HOH 52 4 HOH HOH 102 I HOH 3 4 HOH HOH 103 I HOH 8 4 HOH HOH 101 D HOH 56 4 HOH HOH 102 D HOH 14 4 HOH HOH 103 D HOH 58 4 HOH HOH 104 D HOH 6 4 HOH HOH 105 D HOH 10 4 HOH HOH 106 D HOH 65 4 HOH HOH 101 J HOH 34 4 HOH HOH 102 J HOH 7 4 HOH HOH 103 J HOH 63 4 HOH HOH 104 J HOH 41 4 HOH HOH 105 J HOH 29 4 HOH HOH 106 J HOH 23 4 HOH HOH 107 J HOH 45 4 HOH HOH 108 J HOH 57 4 HOH HOH 101 F HOH 17 4 HOH HOH 102 F HOH 67 4 HOH HOH 103 F HOH 37 4 HOH HOH 104 F HOH 11 4 HOH HOH 105 F HOH 49 4 HOH HOH 106 F HOH 42 4 HOH HOH 101 L HOH 48 4 HOH HOH 102 L HOH 62 4 HOH HOH 103 L HOH 20 4 HOH HOH 104 L HOH 21 4 HOH HOH 301 K HOH 38 4 HOH HOH 302 K HOH 39 4 HOH HOH 303 K HOH 53 4 HOH HOH 304 K HOH 16 4 HOH HOH 305 K HOH 66 4 HOH HOH 306 K HOH 25 4 HOH HOH 307 K HOH 36 4 HOH HOH 308 K HOH 54 4 HOH HOH 309 K HOH 22 4 HOH HOH 301 C HOH 68 4 HOH HOH 302 C HOH 70 4 HOH HOH 303 C HOH 31 4 HOH HOH 304 C HOH 59 4 HOH HOH 305 C HOH 69 4 HOH HOH 306 C HOH 30 4 HOH HOH 307 C HOH 44 4 HOH HOH 308 C HOH 60 4 HOH HOH 309 C HOH 15 4 HOH HOH 310 C HOH 9 4 HOH HOH 311 C HOH 47 4 HOH HOH 301 E HOH 50 4 HOH HOH 302 E HOH 43 4 HOH HOH 303 E HOH 61 4 HOH HOH 304 E HOH 24 4 HOH HOH 301 G HOH 18 4 HOH HOH 302 G HOH 12 4 HOH HOH 303 G HOH 32 4 HOH HOH 304 G HOH 35 4 HOH HOH 305 G DT 1 n 1 DT 1 A DT 2 n 2 DT 2 A DG 3 n 3 DG 3 A DT 4 n 4 DT 4 A DG 5 n 5 DG 5 A DT 6 n 6 DT 6 A DT 7 n 7 DT 7 A DT 8 n 8 DT 8 A DT 9 n 9 DT 9 A DA 10 n 10 DA 10 A DT 11 n 11 DT 11 A DG 12 n 12 DG 12 A DA 13 n 13 DA 13 A DC 14 n 14 DC 14 A DG 15 n 15 DG 15 A DT 16 n 16 DT 16 A DC 17 n 17 DC 17 A DC 18 n 18 DC 18 A DG 22 n 1 DG 1 H DG 23 n 2 DG 2 H DA 24 n 3 DA 3 H DC 25 n 4 DC 4 H DG 26 n 5 DG 5 H DT 27 n 6 DT 6 H 5HC 28 n 7 5HC 7 H DA 29 n 8 DA 8 H DT 30 n 9 DT 9 H DA 31 n 10 DA 10 H DA 32 n 11 DA 11 H DA 33 n 12 DA 12 H DA 34 n 13 DA 13 H DC 35 n 14 DC 14 H DA 36 n 15 DA 15 H DC 37 n 16 DC 16 H DA 38 n 17 DA 17 H DA 39 n 18 DA 18 H DT 1 n 1 DT 1 B DT 2 n 2 DT 2 B DG 3 n 3 DG 3 B DT 4 n 4 DT 4 B DG 5 n 5 DG 5 B DT 6 n 6 DT 6 B DT 7 n 7 DT 7 B DT 8 n 8 DT 8 B DT 9 n 9 DT 9 B DA 10 n 10 DA 10 B DT 11 n 11 DT 11 B DG 12 n 12 DG 12 B DA 13 n 13 DA 13 B DC 14 n 14 DC 14 B DG 15 n 15 DG 15 B DT 16 n 16 DT 16 B DC 17 n 17 DC 17 B DC 18 n 18 DC 18 B DG 22 n 1 DG 1 I DG 23 n 2 DG 2 I DA 24 n 3 DA 3 I DC 25 n 4 DC 4 I DG 26 n 5 DG 5 I DT 27 n 6 DT 6 I 5HC 28 n 7 5HC 7 I DA 29 n 8 DA 8 I DT 30 n 9 DT 9 I DA 31 n 10 DA 10 I DA 32 n 11 DA 11 I DA 33 n 12 DA 12 I DA 34 n 13 DA 13 I DC 35 n 14 DC 14 I DA 36 n 15 DA 15 I DC 37 n 16 DC 16 I DA 38 n 17 DA 17 I DA 39 n 18 DA 18 I DT 1 n 1 DT 1 D DT 2 n 2 DT 2 D DG 3 n 3 DG 3 D DT 4 n 4 DT 4 D DG 5 n 5 DG 5 D DT 6 n 6 DT 6 D DT 7 n 7 DT 7 D DT 8 n 8 DT 8 D DT 9 n 9 DT 9 D DA 10 n 10 DA 10 D DT 11 n 11 DT 11 D DG 12 n 12 DG 12 D DA 13 n 13 DA 13 D DC 14 n 14 DC 14 D DG 15 n 15 DG 15 D DT 16 n 16 DT 16 D DC 17 n 17 DC 17 D DC 18 n 18 DC 18 D DG 22 n 1 DG 1 J DG 23 n 2 DG 2 J DA 24 n 3 DA 3 J DC 25 n 4 DC 4 J DG 26 n 5 DG 5 J DT 27 n 6 DT 6 J 5HC 28 n 7 5HC 7 J DA 29 n 8 DA 8 J DT 30 n 9 DT 9 J DA 31 n 10 DA 10 J DA 32 n 11 DA 11 J DA 33 n 12 DA 12 J DA 34 n 13 DA 13 J DC 35 n 14 DC 14 J DA 36 n 15 DA 15 J DC 37 n 16 DC 16 J DA 38 n 17 DA 17 J DA 39 n 18 DA 18 J DT 1 n 1 DT 1 F DT 2 n 2 DT 2 F DG 3 n 3 DG 3 F DT 4 n 4 DT 4 F DG 5 n 5 DG 5 F DT 6 n 6 DT 6 F DT 7 n 7 DT 7 F DT 8 n 8 DT 8 F DT 9 n 9 DT 9 F DA 10 n 10 DA 10 F DT 11 n 11 DT 11 F DG 12 n 12 DG 12 F DA 13 n 13 DA 13 F DC 14 n 14 DC 14 F DG 15 n 15 DG 15 F DT 16 n 16 DT 16 F DC 17 n 17 DC 17 F DC 18 n 18 DC 18 F DG 22 n 1 DG 1 L DG 23 n 2 DG 2 L DA 24 n 3 DA 3 L DC 25 n 4 DC 4 L DG 26 n 5 DG 5 L DT 27 n 6 DT 6 L 5HC 28 n 7 5HC 7 L DA 29 n 8 DA 8 L DT 30 n 9 DT 9 L DA 31 n 10 DA 10 L DA 32 n 11 DA 11 L DA 33 n 12 DA 12 L DA 34 n 13 DA 13 L DC 35 n 14 DC 14 L DA 36 n 15 DA 15 L DC 37 n 16 DC 16 L DA 38 n 17 DA 17 L DA 39 n 18 DA 18 L THR 183 n 1 THR 183 K ARG 184 n 2 ARG 184 K THR 185 n 3 THR 185 K LYS 186 n 4 LYS 186 K ASP 187 n 5 ASP 187 K LYS 188 n 6 LYS 188 K TYR 189 n 7 TYR 189 K ARG 190 n 8 ARG 190 K VAL 191 n 9 VAL 191 K VAL 192 n 10 VAL 192 K TYR 193 n 11 TYR 193 K THR 194 n 12 THR 194 K ASP 195 n 13 ASP 195 K HIS 196 n 14 HIS 196 K GLN 197 n 15 GLN 197 K ARG 198 n 16 ARG 198 K LEU 199 n 17 LEU 199 K GLU 200 n 18 GLU 200 K LEU 201 n 19 LEU 201 K GLU 202 n 20 GLU 202 K LYS 203 n 21 LYS 203 K GLU 204 n 22 GLU 204 K PHE 205 n 23 PHE 205 K HIS 206 n 24 HIS 206 K TYR 207 n 25 TYR 207 K SER 208 n 26 SER 208 K ARG 209 n 27 ARG 209 K TYR 210 n 28 TYR 210 K ILE 211 n 29 ILE 211 K THR 212 n 30 THR 212 K ILE 213 n 31 ILE 213 K ARG 214 n 32 ARG 214 K ARG 215 n 33 ARG 215 K LYS 216 n 34 LYS 216 K SER 217 n 35 SER 217 K GLU 218 n 36 GLU 218 K LEU 219 n 37 LEU 219 K ALA 220 n 38 ALA 220 K ALA 221 n 39 ALA 221 K ASN 222 n 40 ASN 222 K LEU 223 n 41 LEU 223 K GLY 224 n 42 GLY 224 K LEU 225 n 43 LEU 225 K THR 226 n 44 THR 226 K GLU 227 n 45 GLU 227 K ARG 228 n 46 ARG 228 K GLN 229 n 47 GLN 229 K VAL 230 n 48 VAL 230 K LYS 231 n 49 LYS 231 K ILE 232 n 50 ILE 232 K TRP 233 n 51 TRP 233 K PHE 234 n 52 PHE 234 K GLN 235 n 53 GLN 235 K ASN 236 n 54 ASN 236 K ARG 237 n 55 ARG 237 K ARG 238 n 56 ARG 238 K ALA 239 n 57 ALA 239 K LYS 240 n 58 LYS 240 K GLU 241 n 59 GLU 241 K ARG 242 n 60 ARG 242 K LYS 243 n 61 LYS 243 K n 62 244 K n 63 245 K n 64 246 K n 65 247 K THR 183 n 1 THR 183 C ARG 184 n 2 ARG 184 C THR 185 n 3 THR 185 C LYS 186 n 4 LYS 186 C ASP 187 n 5 ASP 187 C LYS 188 n 6 LYS 188 C TYR 189 n 7 TYR 189 C ARG 190 n 8 ARG 190 C VAL 191 n 9 VAL 191 C VAL 192 n 10 VAL 192 C TYR 193 n 11 TYR 193 C THR 194 n 12 THR 194 C ASP 195 n 13 ASP 195 C HIS 196 n 14 HIS 196 C GLN 197 n 15 GLN 197 C ARG 198 n 16 ARG 198 C LEU 199 n 17 LEU 199 C GLU 200 n 18 GLU 200 C LEU 201 n 19 LEU 201 C GLU 202 n 20 GLU 202 C LYS 203 n 21 LYS 203 C GLU 204 n 22 GLU 204 C PHE 205 n 23 PHE 205 C HIS 206 n 24 HIS 206 C TYR 207 n 25 TYR 207 C SER 208 n 26 SER 208 C ARG 209 n 27 ARG 209 C TYR 210 n 28 TYR 210 C ILE 211 n 29 ILE 211 C THR 212 n 30 THR 212 C ILE 213 n 31 ILE 213 C ARG 214 n 32 ARG 214 C ARG 215 n 33 ARG 215 C LYS 216 n 34 LYS 216 C SER 217 n 35 SER 217 C GLU 218 n 36 GLU 218 C LEU 219 n 37 LEU 219 C ALA 220 n 38 ALA 220 C ALA 221 n 39 ALA 221 C ASN 222 n 40 ASN 222 C LEU 223 n 41 LEU 223 C GLY 224 n 42 GLY 224 C LEU 225 n 43 LEU 225 C THR 226 n 44 THR 226 C GLU 227 n 45 GLU 227 C ARG 228 n 46 ARG 228 C GLN 229 n 47 GLN 229 C VAL 230 n 48 VAL 230 C LYS 231 n 49 LYS 231 C ILE 232 n 50 ILE 232 C TRP 233 n 51 TRP 233 C PHE 234 n 52 PHE 234 C GLN 235 n 53 GLN 235 C ASN 236 n 54 ASN 236 C ARG 237 n 55 ARG 237 C ARG 238 n 56 ARG 238 C ALA 239 n 57 ALA 239 C LYS 240 n 58 LYS 240 C GLU 241 n 59 GLU 241 C ARG 242 n 60 ARG 242 C LYS 243 n 61 LYS 243 C VAL 244 n 62 VAL 244 C ASN 245 n 63 ASN 245 C n 64 246 C n 65 247 C n 1 183 E n 2 184 E THR 185 n 3 THR 185 E LYS 186 n 4 LYS 186 E ASP 187 n 5 ASP 187 E LYS 188 n 6 LYS 188 E TYR 189 n 7 TYR 189 E ARG 190 n 8 ARG 190 E VAL 191 n 9 VAL 191 E VAL 192 n 10 VAL 192 E TYR 193 n 11 TYR 193 E THR 194 n 12 THR 194 E ASP 195 n 13 ASP 195 E HIS 196 n 14 HIS 196 E GLN 197 n 15 GLN 197 E ARG 198 n 16 ARG 198 E LEU 199 n 17 LEU 199 E GLU 200 n 18 GLU 200 E LEU 201 n 19 LEU 201 E GLU 202 n 20 GLU 202 E LYS 203 n 21 LYS 203 E GLU 204 n 22 GLU 204 E PHE 205 n 23 PHE 205 E HIS 206 n 24 HIS 206 E TYR 207 n 25 TYR 207 E SER 208 n 26 SER 208 E ARG 209 n 27 ARG 209 E TYR 210 n 28 TYR 210 E ILE 211 n 29 ILE 211 E THR 212 n 30 THR 212 E ILE 213 n 31 ILE 213 E ARG 214 n 32 ARG 214 E ARG 215 n 33 ARG 215 E LYS 216 n 34 LYS 216 E SER 217 n 35 SER 217 E GLU 218 n 36 GLU 218 E LEU 219 n 37 LEU 219 E ALA 220 n 38 ALA 220 E ALA 221 n 39 ALA 221 E ASN 222 n 40 ASN 222 E LEU 223 n 41 LEU 223 E GLY 224 n 42 GLY 224 E LEU 225 n 43 LEU 225 E THR 226 n 44 THR 226 E GLU 227 n 45 GLU 227 E ARG 228 n 46 ARG 228 E GLN 229 n 47 GLN 229 E VAL 230 n 48 VAL 230 E LYS 231 n 49 LYS 231 E ILE 232 n 50 ILE 232 E TRP 233 n 51 TRP 233 E PHE 234 n 52 PHE 234 E GLN 235 n 53 GLN 235 E ASN 236 n 54 ASN 236 E ARG 237 n 55 ARG 237 E ARG 238 n 56 ARG 238 E ALA 239 n 57 ALA 239 E LYS 240 n 58 LYS 240 E GLU 241 n 59 GLU 241 E ARG 242 n 60 ARG 242 E LYS 243 n 61 LYS 243 E VAL 244 n 62 VAL 244 E n 63 245 E n 64 246 E n 65 247 E THR 183 n 1 THR 183 G ARG 184 n 2 ARG 184 G THR 185 n 3 THR 185 G LYS 186 n 4 LYS 186 G ASP 187 n 5 ASP 187 G LYS 188 n 6 LYS 188 G TYR 189 n 7 TYR 189 G ARG 190 n 8 ARG 190 G VAL 191 n 9 VAL 191 G VAL 192 n 10 VAL 192 G TYR 193 n 11 TYR 193 G THR 194 n 12 THR 194 G ASP 195 n 13 ASP 195 G HIS 196 n 14 HIS 196 G GLN 197 n 15 GLN 197 G ARG 198 n 16 ARG 198 G LEU 199 n 17 LEU 199 G GLU 200 n 18 GLU 200 G LEU 201 n 19 LEU 201 G GLU 202 n 20 GLU 202 G LYS 203 n 21 LYS 203 G GLU 204 n 22 GLU 204 G PHE 205 n 23 PHE 205 G HIS 206 n 24 HIS 206 G TYR 207 n 25 TYR 207 G SER 208 n 26 SER 208 G ARG 209 n 27 ARG 209 G TYR 210 n 28 TYR 210 G ILE 211 n 29 ILE 211 G THR 212 n 30 THR 212 G ILE 213 n 31 ILE 213 G ARG 214 n 32 ARG 214 G ARG 215 n 33 ARG 215 G LYS 216 n 34 LYS 216 G SER 217 n 35 SER 217 G GLU 218 n 36 GLU 218 G LEU 219 n 37 LEU 219 G ALA 220 n 38 ALA 220 G ALA 221 n 39 ALA 221 G ASN 222 n 40 ASN 222 G LEU 223 n 41 LEU 223 G GLY 224 n 42 GLY 224 G LEU 225 n 43 LEU 225 G THR 226 n 44 THR 226 G GLU 227 n 45 GLU 227 G ARG 228 n 46 ARG 228 G GLN 229 n 47 GLN 229 G VAL 230 n 48 VAL 230 G LYS 231 n 49 LYS 231 G ILE 232 n 50 ILE 232 G TRP 233 n 51 TRP 233 G PHE 234 n 52 PHE 234 G GLN 235 n 53 GLN 235 G ASN 236 n 54 ASN 236 G ARG 237 n 55 ARG 237 G ARG 238 n 56 ARG 238 G ALA 239 n 57 ALA 239 G LYS 240 n 58 LYS 240 G GLU 241 n 59 GLU 241 G ARG 242 n 60 ARG 242 G LYS 243 n 61 LYS 243 G n 62 244 G n 63 245 G n 64 246 G n 65 247 G 1.8443 -0.2814 0.0198 1.5373 -0.1535 0.9395 -0.1473 0.0849 -0.1377 -0.1481 -0.0910 0.0607 -0.0438 0.1478 0.2383 0.0976 -0.1450 0.0596 0.3477 -0.0624 0.3704 refined -7.1568 18.7467 -20.2358 X-RAY DIFFRACTION 3.4109 -1.7905 -1.5252 2.6567 0.1439 1.3482 -0.2803 -0.0914 -0.0081 0.2753 0.1223 -0.1340 -0.0024 0.0426 0.1580 0.0670 0.0637 0.0045 0.2894 -0.0226 0.2151 refined -6.1592 16.9904 18.2277 X-RAY DIFFRACTION 3.4705 -2.1676 -0.0529 2.7442 -0.1946 0.8740 -0.3798 -0.4127 -0.1337 0.2358 0.3008 0.1862 -0.0046 0.0771 0.0790 0.0645 0.1234 0.0349 0.3678 0.0285 0.1957 refined -10.5408 46.5482 19.0251 X-RAY DIFFRACTION 2.6452 0.5942 -0.3138 1.8855 0.1121 0.9648 -0.2172 0.0087 0.0033 -0.1462 -0.0165 -0.1417 -0.0211 -0.1769 0.2337 0.0775 -0.1053 -0.0012 0.2981 0.0380 0.3781 refined -9.3754 47.0668 -19.5527 X-RAY DIFFRACTION 0.4213 0.8455 0.1405 2.7988 2.0623 4.8391 0.0085 0.0819 -0.0212 0.2653 0.0642 -0.1829 0.1248 0.2316 -0.0726 0.1277 -0.0465 0.0335 0.2489 -0.0110 0.2996 refined 0.9615 17.4148 -10.1170 X-RAY DIFFRACTION 0.9838 -0.7241 -1.0818 3.5496 -1.0531 3.0113 -0.0618 -0.0541 0.0331 -0.1972 0.0446 0.2465 0.1847 -0.2933 0.0172 0.0938 0.0282 0.0280 0.2919 -0.0061 0.2402 refined -13.1383 17.1174 7.9890 X-RAY DIFFRACTION 1.5995 0.3226 0.6304 4.9713 -0.0300 2.4766 -0.0864 -0.2603 -0.0315 -0.1966 0.2064 -0.2362 -0.0693 0.2345 -0.1200 0.0617 0.0648 0.0202 0.2964 -0.0039 0.2007 refined -2.8528 46.8296 8.4397 X-RAY DIFFRACTION 0.6520 0.3399 -0.0224 2.4290 -1.6318 3.9268 -0.0486 0.2071 -0.0164 0.3706 0.0768 0.2915 -0.1704 -0.1610 -0.0282 0.0949 -0.0065 0.0114 0.2336 0.0097 0.2614 refined -17.4540 47.8539 -9.3116 X-RAY DIFFRACTION A 1 A 18 X-RAY DIFFRACTION 1 H 1 H 18 X-RAY DIFFRACTION 1 B 1 B 18 X-RAY DIFFRACTION 2 I 1 I 18 X-RAY DIFFRACTION 2 D 1 D 18 X-RAY DIFFRACTION 3 J 1 J 18 X-RAY DIFFRACTION 3 F 1 F 18 X-RAY DIFFRACTION 4 L 1 L 18 X-RAY DIFFRACTION 4 K 183 K 243 X-RAY DIFFRACTION 5 C 183 C 243 X-RAY DIFFRACTION 6 E 185 E 243 X-RAY DIFFRACTION 7 G 183 G 243 X-RAY DIFFRACTION 8 author_and_software_defined_assembly PISA 3 trimeric author_and_software_defined_assembly PISA 3 trimeric author_and_software_defined_assembly PISA 3 trimeric author_and_software_defined_assembly PISA 3 trimeric isothermal titration calorimetry 3760 -16 9700 3870 -19 9790 3700 -18 9610 3750 -20 9690 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 K VAL 244 I VAL 62 1 Y 1 K ASN 245 I ASN 63 1 Y 1 K LYS 246 I LYS 64 1 Y 1 K LYS 247 I LYS 65 1 Y 1 C LYS 246 J LYS 64 1 Y 1 C LYS 247 J LYS 65 1 Y 1 E THR 183 K THR 1 1 Y 1 E ARG 184 K ARG 2 1 Y 1 E ASN 245 K ASN 63 1 Y 1 E LYS 246 K LYS 64 1 Y 1 E LYS 247 K LYS 65 1 Y 1 G VAL 244 L VAL 62 1 Y 1 G ASN 245 L ASN 63 1 Y 1 G LYS 246 L LYS 64 1 Y 1 G LYS 247 L LYS 65 1 Y 1 L L N7 O DA HOH 17 101 2.01 1 G G O O HOH HOH 301 304 2.10 1 C C O O HOH HOH 301 304 2.12 1 1.99 0.30 108.30 110.29 B B B O4' C1' N1 DC DC DC 14 14 14 N 1 2.09 0.30 108.30 110.39 I I I O4' C1' N1 DC DC DC 4 4 4 N 1 2.00 0.30 108.30 110.30 L L L O4' C1' N1 DC DC DC 4 4 4 N 1 A A P OP3 DT DT 1 1 -0.109 0.012 1.607 1.498 N 1 B B P OP3 DT DT 1 1 -0.128 0.012 1.607 1.479 N 1 D D P OP3 DT DT 1 1 -0.116 0.012 1.607 1.491 N 1 F F P OP3 DT DT 1 1 -0.122 0.012 1.607 1.485 N 1 H I O6 OP1 DG DA 1 11 2.14 1_555 1_554 1 K LYS 186 -158.29 -113.97 1 C LYS 186 -159.50 -107.80 1 E TYR 189 35.56 91.83 1 E ARG 190 46.93 127.31 1 G LYS 186 -152.62 -114.03 290.450 81.1800 26.740 -3.7000 3.7800 -0.0200 3.3600 0.7500 -0.5500 0.9490 0.9110 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED 0.2857 0.2169 0.2203 2.7800 42.1800 709 14157 4.8000 90.0300 54.2940 0.4760 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.5070 0.8000 0.8000 1.2000 5LUX MAXIMUM LIKELIHOOD MASK 2.7800 42.1800 70 5215 58.02 0 2968 2177 390 0.009 0.012 5672 0.002 0.019 3790 1.734 1.396 8063 1.492 2.215 8835 26.660 6.678 992 24.067 18.750 152 21.786 15.000 428 16.440 15.000 38 0.246 0.243 829 0.011 0.020 4113 0.002 0.020 1252 1 A 1 3536 X-RAY DIFFRACTION interatomic distance 0.040 0.050 2 B 1 3536 X-RAY DIFFRACTION interatomic distance 0.040 0.050 1 A 2 3535 X-RAY DIFFRACTION interatomic distance 0.040 0.050 2 D 2 3535 X-RAY DIFFRACTION interatomic distance 0.040 0.050 1 A 3 3565 X-RAY DIFFRACTION interatomic distance 0.030 0.050 2 F 3 3565 X-RAY DIFFRACTION interatomic distance 0.030 0.050 1 B 4 3591 X-RAY DIFFRACTION interatomic distance 0.030 0.050 2 D 4 3591 X-RAY DIFFRACTION interatomic distance 0.030 0.050 1 B 5 3540 X-RAY DIFFRACTION interatomic distance 0.040 0.050 2 F 5 3540 X-RAY DIFFRACTION interatomic distance 0.040 0.050 1 D 6 3535 X-RAY DIFFRACTION interatomic distance 0.040 0.050 2 F 6 3535 X-RAY DIFFRACTION interatomic distance 0.040 0.050 1 K 7 2044 X-RAY DIFFRACTION interatomic distance 0.100 0.050 2 C 7 2044 X-RAY DIFFRACTION interatomic distance 0.100 0.050 1 K 8 1972 X-RAY DIFFRACTION interatomic distance 0.100 0.050 2 E 8 1972 X-RAY DIFFRACTION interatomic distance 0.100 0.050 1 K 9 2069 X-RAY DIFFRACTION interatomic distance 0.090 0.050 2 G 9 2069 X-RAY DIFFRACTION interatomic distance 0.090 0.050 1 C 10 2018 X-RAY DIFFRACTION interatomic distance 0.090 0.050 2 E 10 2018 X-RAY DIFFRACTION interatomic distance 0.090 0.050 1 C 11 2064 X-RAY DIFFRACTION interatomic distance 0.100 0.050 2 G 11 2064 X-RAY DIFFRACTION interatomic distance 0.100 0.050 1 E 12 1974 X-RAY DIFFRACTION interatomic distance 0.100 0.050 2 G 12 1974 X-RAY DIFFRACTION interatomic distance 0.100 0.050 0.4910 0.0000 0.4550 2.8500 53 946 81.6800 2.780 42.180 7Q3O 14867 0.997 0.058 0.052 0.078 1 7.600 30774 2.100 90.000 0.693 2.780 2.930 4282 2121 0.640 0.638 0.944 1 1.000 2.000 87.600 0.026 8.780 42.180 898 451 0.997 0.024 0.036 1 18.500 2.000 85.700 refinement REFMAC 5.8.0257 data scaling Aimless 0.7.3 data extraction PDB_EXTRACT 3.27 data reduction XDS phasing PHASER N Structure of CDX1 bound to hydroxymethylated DNA 1 N N 2 N N 1 N N 2 N N 1 N N 2 N N 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N K THR 194 I THR 12 HELX_P K SER 208 I SER 26 1 AA1 15 K THR 212 I THR 30 HELX_P K ASN 222 I ASN 40 1 AA2 11 K THR 226 I THR 44 HELX_P K LYS 243 I LYS 61 1 AA3 18 C THR 194 J THR 12 HELX_P C SER 208 J SER 26 1 AA4 15 C THR 212 J THR 30 HELX_P C ASN 222 J ASN 40 1 AA5 11 C THR 226 J THR 44 HELX_P C ASN 245 J ASN 63 1 AA6 20 E THR 194 K THR 12 HELX_P E SER 208 K SER 26 1 AA7 15 E THR 212 K THR 30 HELX_P E ASN 222 K ASN 40 1 AA8 11 E THR 226 K THR 44 HELX_P E VAL 244 K VAL 62 1 AA9 19 G THR 194 L THR 12 HELX_P G SER 208 L SER 26 1 AB1 15 G THR 212 L THR 30 HELX_P G ASN 222 L ASN 40 1 AB2 11 G THR 226 L THR 44 HELX_P G LYS 243 L LYS 61 1 AB3 18 covale 1.593 both H DT 6 B O3' DT 6 1_555 H 5HC 7 B P 5HC 7 1_555 covale 1.645 both H 5HC 7 B O3' 5HC 7 1_555 H DA 8 B P DA 8 1_555 covale 1.579 both I DT 6 D O3' DT 6 1_555 I 5HC 7 D P 5HC 7 1_555 covale 1.631 both I 5HC 7 D O3' 5HC 7 1_555 I DA 8 D P DA 8 1_555 covale 1.602 both J DT 6 F O3' DT 6 1_555 J 5HC 7 F P 5HC 7 1_555 covale 1.618 both J 5HC 7 F O3' 5HC 7 1_555 J DA 8 F P DA 8 1_555 covale 1.575 both L DT 6 H O3' DT 6 1_555 L 5HC 7 H P 5HC 7 1_555 covale 1.624 both L 5HC 7 H O3' 5HC 7 1_555 L DA 8 H P DA 8 1_555 hydrog WATSON-CRICK A DT 1 A N3 DT 1 1_555 H DA 18 B N1 DA 18 1_555 hydrog WATSON-CRICK A DT 1 A O4 DT 1 1_555 H DA 18 B N6 DA 18 1_555 hydrog DT-DA PAIR A DT 2 A O4 DT 2 1_555 H DA 17 B N6 DA 17 1_555 hydrog WATSON-CRICK A DG 3 A N1 DG 3 1_555 H DC 16 B N3 DC 16 1_555 hydrog WATSON-CRICK A DG 3 A N2 DG 3 1_555 H DC 16 B O2 DC 16 1_555 hydrog WATSON-CRICK A DG 3 A O6 DG 3 1_555 H DC 16 B N4 DC 16 1_555 hydrog WATSON-CRICK A DT 4 A N3 DT 4 1_555 H DA 15 B N1 DA 15 1_555 hydrog WATSON-CRICK A DT 4 A O4 DT 4 1_555 H DA 15 B N6 DA 15 1_555 hydrog WATSON-CRICK A DG 5 A N1 DG 5 1_555 H DC 14 B N3 DC 14 1_555 hydrog WATSON-CRICK A DG 5 A N2 DG 5 1_555 H DC 14 B O2 DC 14 1_555 hydrog WATSON-CRICK A DG 5 A O6 DG 5 1_555 H DC 14 B N4 DC 14 1_555 hydrog WATSON-CRICK A DT 6 A N3 DT 6 1_555 H DA 13 B N1 DA 13 1_555 hydrog WATSON-CRICK A DT 6 A O4 DT 6 1_555 H DA 13 B N6 DA 13 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 H DA 12 B N1 DA 12 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 H DA 12 B N6 DA 12 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 H DA 11 B N1 DA 11 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 H DA 11 B N6 DA 11 1_555 hydrog WATSON-CRICK A DT 9 A N3 DT 9 1_555 H DA 10 B N1 DA 10 1_555 hydrog WATSON-CRICK A DT 9 A O4 DT 9 1_555 H DA 10 B N6 DA 10 1_555 hydrog WATSON-CRICK A DA 10 A N1 DA 10 1_555 H DT 9 B N3 DT 9 1_555 hydrog WATSON-CRICK A DA 10 A N6 DA 10 1_555 H DT 9 B O4 DT 9 1_555 hydrog WATSON-CRICK A DT 11 A N3 DT 11 1_555 H DA 8 B N1 DA 8 1_555 hydrog WATSON-CRICK A DT 11 A O4 DT 11 1_555 H DA 8 B N6 DA 8 1_555 hydrog WATSON-CRICK A DG 12 A N1 DG 12 1_555 H 5HC 7 B N3 5HC 7 1_555 hydrog WATSON-CRICK A DG 12 A N2 DG 12 1_555 H 5HC 7 B O2 5HC 7 1_555 hydrog WATSON-CRICK A DG 12 A O6 DG 12 1_555 H 5HC 7 B N4 5HC 7 1_555 hydrog WATSON-CRICK A DA 13 A N1 DA 13 1_555 H DT 6 B N3 DT 6 1_555 hydrog WATSON-CRICK A DA 13 A N6 DA 13 1_555 H DT 6 B O4 DT 6 1_555 hydrog WATSON-CRICK A DC 14 A N3 DC 14 1_555 H DG 5 B N1 DG 5 1_555 hydrog WATSON-CRICK A DC 14 A N4 DC 14 1_555 H DG 5 B O6 DG 5 1_555 hydrog WATSON-CRICK A DC 14 A O2 DC 14 1_555 H DG 5 B N2 DG 5 1_555 hydrog WATSON-CRICK A DG 15 A N1 DG 15 1_555 H DC 4 B N3 DC 4 1_555 hydrog WATSON-CRICK A DG 15 A N2 DG 15 1_555 H DC 4 B O2 DC 4 1_555 hydrog WATSON-CRICK A DG 15 A O6 DG 15 1_555 H DC 4 B N4 DC 4 1_555 hydrog WATSON-CRICK A DT 16 A N3 DT 16 1_555 H DA 3 B N1 DA 3 1_555 hydrog WATSON-CRICK A DT 16 A O4 DT 16 1_555 H DA 3 B N6 DA 3 1_555 hydrog WATSON-CRICK A DC 17 A N3 DC 17 1_555 H DG 2 B N1 DG 2 1_555 hydrog WATSON-CRICK A DC 17 A N4 DC 17 1_555 H DG 2 B O6 DG 2 1_555 hydrog WATSON-CRICK A DC 17 A O2 DC 17 1_555 H DG 2 B N2 DG 2 1_555 hydrog WATSON-CRICK B DT 1 C N3 DT 1 1_555 I DA 18 D N1 DA 18 1_555 hydrog WATSON-CRICK B DT 1 C O4 DT 1 1_555 I DA 18 D N6 DA 18 1_555 hydrog DT-DA PAIR B DT 2 C O4 DT 2 1_555 I DA 17 D N6 DA 17 1_555 hydrog WATSON-CRICK B DG 3 C N1 DG 3 1_555 I DC 16 D N3 DC 16 1_555 hydrog WATSON-CRICK B DG 3 C N2 DG 3 1_555 I DC 16 D O2 DC 16 1_555 hydrog WATSON-CRICK B DG 3 C O6 DG 3 1_555 I DC 16 D N4 DC 16 1_555 hydrog WATSON-CRICK B DT 4 C N3 DT 4 1_555 I DA 15 D N1 DA 15 1_555 hydrog WATSON-CRICK B DT 4 C O4 DT 4 1_555 I DA 15 D N6 DA 15 1_555 hydrog WATSON-CRICK B DG 5 C N1 DG 5 1_555 I DC 14 D N3 DC 14 1_555 hydrog WATSON-CRICK B DG 5 C N2 DG 5 1_555 I DC 14 D O2 DC 14 1_555 hydrog WATSON-CRICK B DG 5 C O6 DG 5 1_555 I DC 14 D N4 DC 14 1_555 hydrog WATSON-CRICK B DT 6 C N3 DT 6 1_555 I DA 13 D N1 DA 13 1_555 hydrog WATSON-CRICK B DT 6 C O4 DT 6 1_555 I DA 13 D N6 DA 13 1_555 hydrog WATSON-CRICK B DT 7 C N3 DT 7 1_555 I DA 12 D N1 DA 12 1_555 hydrog WATSON-CRICK B DT 7 C O4 DT 7 1_555 I DA 12 D N6 DA 12 1_555 hydrog WATSON-CRICK B DT 8 C N3 DT 8 1_555 I DA 11 D N1 DA 11 1_555 hydrog WATSON-CRICK B DT 8 C O4 DT 8 1_555 I DA 11 D N6 DA 11 1_555 hydrog WATSON-CRICK B DT 9 C N3 DT 9 1_555 I DA 10 D N1 DA 10 1_555 hydrog WATSON-CRICK B DT 9 C O4 DT 9 1_555 I DA 10 D N6 DA 10 1_555 hydrog WATSON-CRICK B DA 10 C N1 DA 10 1_555 I DT 9 D N3 DT 9 1_555 hydrog WATSON-CRICK B DA 10 C N6 DA 10 1_555 I DT 9 D O4 DT 9 1_555 hydrog WATSON-CRICK B DT 11 C N3 DT 11 1_555 I DA 8 D N1 DA 8 1_555 hydrog WATSON-CRICK B DT 11 C O4 DT 11 1_555 I DA 8 D N6 DA 8 1_555 hydrog WATSON-CRICK B DG 12 C N1 DG 12 1_555 I 5HC 7 D N3 5HC 7 1_555 hydrog WATSON-CRICK B DG 12 C N2 DG 12 1_555 I 5HC 7 D O2 5HC 7 1_555 hydrog WATSON-CRICK B DG 12 C O6 DG 12 1_555 I 5HC 7 D N4 5HC 7 1_555 hydrog WATSON-CRICK B DA 13 C N1 DA 13 1_555 I DT 6 D N3 DT 6 1_555 hydrog WATSON-CRICK B DA 13 C N6 DA 13 1_555 I DT 6 D O4 DT 6 1_555 hydrog WATSON-CRICK B DC 14 C N3 DC 14 1_555 I DG 5 D N1 DG 5 1_555 hydrog WATSON-CRICK B DC 14 C N4 DC 14 1_555 I DG 5 D O6 DG 5 1_555 hydrog WATSON-CRICK B DC 14 C O2 DC 14 1_555 I DG 5 D N2 DG 5 1_555 hydrog WATSON-CRICK B DG 15 C N1 DG 15 1_555 I DC 4 D N3 DC 4 1_555 hydrog WATSON-CRICK B DG 15 C N2 DG 15 1_555 I DC 4 D O2 DC 4 1_555 hydrog WATSON-CRICK B DG 15 C O6 DG 15 1_555 I DC 4 D N4 DC 4 1_555 hydrog WATSON-CRICK B DT 16 C N3 DT 16 1_555 I DA 3 D N1 DA 3 1_555 hydrog WATSON-CRICK B DT 16 C O4 DT 16 1_555 I DA 3 D N6 DA 3 1_555 hydrog WATSON-CRICK B DC 17 C N3 DC 17 1_555 I DG 2 D N1 DG 2 1_555 hydrog WATSON-CRICK B DC 17 C N4 DC 17 1_555 I DG 2 D O6 DG 2 1_555 hydrog WATSON-CRICK B DC 17 C O2 DC 17 1_555 I DG 2 D N2 DG 2 1_555 hydrog WATSON-CRICK D DT 1 E N3 DT 1 1_555 J DA 18 F N1 DA 18 1_555 hydrog WATSON-CRICK D DT 1 E O4 DT 1 1_555 J DA 18 F N6 DA 18 1_555 hydrog DT-DA PAIR D DT 2 E O4 DT 2 1_555 J DA 17 F N6 DA 17 1_555 hydrog WATSON-CRICK D DG 3 E N1 DG 3 1_555 J DC 16 F N3 DC 16 1_555 hydrog WATSON-CRICK D DG 3 E N2 DG 3 1_555 J DC 16 F O2 DC 16 1_555 hydrog WATSON-CRICK D DG 3 E O6 DG 3 1_555 J DC 16 F N4 DC 16 1_555 hydrog WATSON-CRICK D DT 4 E N3 DT 4 1_555 J DA 15 F N1 DA 15 1_555 hydrog WATSON-CRICK D DT 4 E O4 DT 4 1_555 J DA 15 F N6 DA 15 1_555 hydrog WATSON-CRICK D DG 5 E N1 DG 5 1_555 J DC 14 F N3 DC 14 1_555 hydrog WATSON-CRICK D DG 5 E N2 DG 5 1_555 J DC 14 F O2 DC 14 1_555 hydrog WATSON-CRICK D DG 5 E O6 DG 5 1_555 J DC 14 F N4 DC 14 1_555 hydrog WATSON-CRICK D DT 6 E N3 DT 6 1_555 J DA 13 F N1 DA 13 1_555 hydrog WATSON-CRICK D DT 6 E O4 DT 6 1_555 J DA 13 F N6 DA 13 1_555 hydrog WATSON-CRICK D DT 7 E N3 DT 7 1_555 J DA 12 F N1 DA 12 1_555 hydrog WATSON-CRICK D DT 7 E O4 DT 7 1_555 J DA 12 F N6 DA 12 1_555 hydrog WATSON-CRICK D DT 8 E N3 DT 8 1_555 J DA 11 F N1 DA 11 1_555 hydrog WATSON-CRICK D DT 8 E O4 DT 8 1_555 J DA 11 F N6 DA 11 1_555 hydrog WATSON-CRICK D DT 9 E N3 DT 9 1_555 J DA 10 F N1 DA 10 1_555 hydrog WATSON-CRICK D DT 9 E O4 DT 9 1_555 J DA 10 F N6 DA 10 1_555 hydrog WATSON-CRICK D DA 10 E N1 DA 10 1_555 J DT 9 F N3 DT 9 1_555 hydrog WATSON-CRICK D DA 10 E N6 DA 10 1_555 J DT 9 F O4 DT 9 1_555 hydrog WATSON-CRICK D DT 11 E N3 DT 11 1_555 J DA 8 F N1 DA 8 1_555 hydrog WATSON-CRICK D DT 11 E O4 DT 11 1_555 J DA 8 F N6 DA 8 1_555 hydrog WATSON-CRICK D DG 12 E N1 DG 12 1_555 J 5HC 7 F N3 5HC 7 1_555 hydrog WATSON-CRICK D DG 12 E N2 DG 12 1_555 J 5HC 7 F O2 5HC 7 1_555 hydrog WATSON-CRICK D DG 12 E O6 DG 12 1_555 J 5HC 7 F N4 5HC 7 1_555 hydrog WATSON-CRICK D DA 13 E N1 DA 13 1_555 J DT 6 F N3 DT 6 1_555 hydrog WATSON-CRICK D DA 13 E N6 DA 13 1_555 J DT 6 F O4 DT 6 1_555 hydrog WATSON-CRICK D DC 14 E N3 DC 14 1_555 J DG 5 F N1 DG 5 1_555 hydrog WATSON-CRICK D DC 14 E N4 DC 14 1_555 J DG 5 F O6 DG 5 1_555 hydrog WATSON-CRICK D DC 14 E O2 DC 14 1_555 J DG 5 F N2 DG 5 1_555 hydrog WATSON-CRICK D DG 15 E N1 DG 15 1_555 J DC 4 F N3 DC 4 1_555 hydrog WATSON-CRICK D DG 15 E N2 DG 15 1_555 J DC 4 F O2 DC 4 1_555 hydrog WATSON-CRICK D DG 15 E O6 DG 15 1_555 J DC 4 F N4 DC 4 1_555 hydrog WATSON-CRICK D DT 16 E N3 DT 16 1_555 J DA 3 F N1 DA 3 1_555 hydrog WATSON-CRICK D DT 16 E O4 DT 16 1_555 J DA 3 F N6 DA 3 1_555 hydrog WATSON-CRICK D DC 17 E N3 DC 17 1_555 J DG 2 F N1 DG 2 1_555 hydrog WATSON-CRICK D DC 17 E N4 DC 17 1_555 J DG 2 F O6 DG 2 1_555 hydrog WATSON-CRICK D DC 17 E O2 DC 17 1_555 J DG 2 F N2 DG 2 1_555 hydrog WATSON-CRICK F DT 1 G N3 DT 1 1_555 L DA 18 H N1 DA 18 1_555 hydrog WATSON-CRICK F DT 1 G O4 DT 1 1_555 L DA 18 H N6 DA 18 1_555 hydrog DT-DA PAIR F DT 2 G O4 DT 2 1_555 L DA 17 H N6 DA 17 1_555 hydrog WATSON-CRICK F DG 3 G N1 DG 3 1_555 L DC 16 H N3 DC 16 1_555 hydrog WATSON-CRICK F DG 3 G N2 DG 3 1_555 L DC 16 H O2 DC 16 1_555 hydrog WATSON-CRICK F DG 3 G O6 DG 3 1_555 L DC 16 H N4 DC 16 1_555 hydrog WATSON-CRICK F DT 4 G N3 DT 4 1_555 L DA 15 H N1 DA 15 1_555 hydrog WATSON-CRICK F DT 4 G O4 DT 4 1_555 L DA 15 H N6 DA 15 1_555 hydrog WATSON-CRICK F DG 5 G N1 DG 5 1_555 L DC 14 H N3 DC 14 1_555 hydrog WATSON-CRICK F DG 5 G N2 DG 5 1_555 L DC 14 H O2 DC 14 1_555 hydrog WATSON-CRICK F DG 5 G O6 DG 5 1_555 L DC 14 H N4 DC 14 1_555 hydrog WATSON-CRICK F DT 6 G N3 DT 6 1_555 L DA 13 H N1 DA 13 1_555 hydrog WATSON-CRICK F DT 6 G O4 DT 6 1_555 L DA 13 H N6 DA 13 1_555 hydrog WATSON-CRICK F DT 7 G N3 DT 7 1_555 L DA 12 H N1 DA 12 1_555 hydrog WATSON-CRICK F DT 7 G O4 DT 7 1_555 L DA 12 H N6 DA 12 1_555 hydrog WATSON-CRICK F DT 8 G N3 DT 8 1_555 L DA 11 H N1 DA 11 1_555 hydrog WATSON-CRICK F DT 8 G O4 DT 8 1_555 L DA 11 H N6 DA 11 1_555 hydrog WATSON-CRICK F DT 9 G N3 DT 9 1_555 L DA 10 H N1 DA 10 1_555 hydrog WATSON-CRICK F DT 9 G O4 DT 9 1_555 L DA 10 H N6 DA 10 1_555 hydrog WATSON-CRICK F DA 10 G N1 DA 10 1_555 L DT 9 H N3 DT 9 1_555 hydrog WATSON-CRICK F DA 10 G N6 DA 10 1_555 L DT 9 H O4 DT 9 1_555 hydrog WATSON-CRICK F DT 11 G N3 DT 11 1_555 L DA 8 H N1 DA 8 1_555 hydrog WATSON-CRICK F DT 11 G O4 DT 11 1_555 L DA 8 H N6 DA 8 1_555 hydrog WATSON-CRICK F DG 12 G N1 DG 12 1_555 L 5HC 7 H N3 5HC 7 1_555 hydrog WATSON-CRICK F DG 12 G N2 DG 12 1_555 L 5HC 7 H O2 5HC 7 1_555 hydrog WATSON-CRICK F DG 12 G O6 DG 12 1_555 L 5HC 7 H N4 5HC 7 1_555 hydrog WATSON-CRICK F DA 13 G N1 DA 13 1_555 L DT 6 H N3 DT 6 1_555 hydrog WATSON-CRICK F DA 13 G N6 DA 13 1_555 L DT 6 H O4 DT 6 1_555 hydrog WATSON-CRICK F DC 14 G N3 DC 14 1_555 L DG 5 H N1 DG 5 1_555 hydrog WATSON-CRICK F DC 14 G N4 DC 14 1_555 L DG 5 H O6 DG 5 1_555 hydrog WATSON-CRICK F DC 14 G O2 DC 14 1_555 L DG 5 H N2 DG 5 1_555 hydrog WATSON-CRICK F DG 15 G N1 DG 15 1_555 L DC 4 H N3 DC 4 1_555 hydrog WATSON-CRICK F DG 15 G N2 DG 15 1_555 L DC 4 H O2 DC 4 1_555 hydrog WATSON-CRICK F DG 15 G O6 DG 15 1_555 L DC 4 H N4 DC 4 1_555 hydrog WATSON-CRICK F DT 16 G N3 DT 16 1_555 L DA 3 H N1 DA 3 1_555 hydrog WATSON-CRICK F DT 16 G O4 DT 16 1_555 L DA 3 H N6 DA 3 1_555 hydrog WATSON-CRICK F DC 17 G N3 DC 17 1_555 L DG 2 H N1 DG 2 1_555 hydrog WATSON-CRICK F DC 17 G N4 DC 17 1_555 L DG 2 H O6 DG 2 1_555 hydrog WATSON-CRICK F DC 17 G O2 DC 17 1_555 L DG 2 H N2 DG 2 1_555 TRANSCRIPTION transcription factor, DNA-binding protein, hydroxymethylated DNA, TRANSCRIPTION A B A D A F B D B F D F K C K E K G C E C G E G A 1 A 39 0 B 1 B 39 0 A 1 A 39 0 D 1 D 39 0 A 1 A 39 0 F 1 F 39 0 B 1 B 39 0 D 1 D 39 0 B 1 B 39 0 F 1 F 39 0 D 1 D 39 0 F 1 F 39 0 K 183 K 242 0 C 183 C 242 0 K 185 K 242 0 E 185 E 242 0 K 183 K 243 0 G 183 G 243 0 C 185 C 243 0 E 185 E 243 0 C 183 C 242 0 G 183 G 242 0 E 185 E 242 0 G 185 G 242 0 7Q3O PDB 1 1 7Q3O 7Q3O PDB 2 1 7Q3O CDX1_HUMAN UNP 3 151 P47902 TRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK 1 18 7Q3O 1 18 7Q3O A 1 1 18 1 18 7Q3O 1 18 7Q3O H 2 1 18 1 18 7Q3O 1 18 7Q3O B 1 1 18 1 18 7Q3O 1 18 7Q3O I 2 1 18 1 18 7Q3O 1 18 7Q3O D 1 1 18 1 18 7Q3O 1 18 7Q3O J 2 1 18 1 18 7Q3O 1 18 7Q3O F 1 1 18 1 18 7Q3O 1 18 7Q3O L 2 1 18 151 215 7Q3O 183 247 P47902 K 3 1 65 151 215 7Q3O 183 247 P47902 C 3 1 65 151 215 7Q3O 183 247 P47902 E 3 1 65 151 215 7Q3O 183 247 P47902 G 3 1 65 1 P 1