1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 0000-0001-7780-5278 Jones, C.P. 0000-0003-4549-1619 Ferre-D'Amare, A.R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 90.00 90.00 90.00 1.00 1.00 1.00 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking H2 O 18.015 WATER non-polymer K 1 39.098 POTASSIUM ION non-polymer C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 R C N 49 N O N 50 R C N 51 N N N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N C N 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N P N 75 N O N 76 N O N 77 N O N 78 N C N 79 R C N 80 N O N 81 S C N 82 N O N 83 R C N 84 N O N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C N 90 N C N 91 N O N 92 N N N 93 N C N 94 N N N 95 N N Y 96 N C N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N O N 112 N H N 113 N H N 114 N K N 115 N O N 116 N P N 117 N O N 118 N O N 119 N O N 120 N C N 121 R C N 122 N O N 123 S C N 124 N O N 125 R C N 126 N O N 127 R C N 128 N N N 129 N C N 130 N O N 131 N N N 132 N C N 133 N O N 134 N C N 135 N C N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing Y 100 N sing Y 101 N sing Y 102 N doub N 103 N sing Y 104 N sing N 105 N sing Y 106 N doub N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N doub N 151 N sing N 152 N sing To Be Published 0353 Symmetric scaffolds enable de novo modelling of RNA by cryoEM 0000-0001-7780-5278 0000-0003-4549-1619 10.2210/pdb9ndw/pdb pdb_00009ndw 9NDW 1320184 2.71 FSC 0.143 CUT-OFF POINT REL 2025-02-18 RCSB 2026-03-04 2026-03-04 Scaffold attached to quinine-I aptamer (Tonic) local refinement of core 7.4 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 1 Scaffold attached to quinine-I aptamer (Tonic) local refinement of core 0 RECOMBINANT COMPLEX 32630 synthetic construct 905931 in vitro transcription vector pT7-TP(deltai) PARTICLE 1 1 SINGLE PARTICLE 45.09 GATAN K3 BIOQUANTUM (6k x 4k) 300 FIELD EMISSION GUN SPOT SCAN TFS KRIOS BRIGHT FIELD 2000 800 1 PARTICLE SELECTION 1 IMAGE ACQUISITION 1 MASKING CTF CORRECTION 1 LAYERLINE INDEXING DIFFRACTION INDEXING MODEL FITTING MODEL REFINEMENT OTHER INITIAL EULER ASSIGNMENT 1 FINAL EULER ASSIGNMENT 1 CLASSIFICATION 1 RECONSTRUCTION 1 NO NO NO YES ETHANE 9NDW 53433.723 RNA (91-MER) 2 syn polymer 39.098 POTASSIUM ION 2 syn non-polymer 18.015 water 390 nat water no no GGGCCACUGUUUCACUGUUGCGCUACAUCUCCGGACGACUCUAUACCGCGUGGAUAUGGCACGCAACUUCAAGACGGGCA CCGUAAAUGUCCUCGGGCGUCGUCCGGAGGCCACACGAAAGUGUGGAGUGACCAGUGGCCCCACCCUGAAGGUAAACUUG UAGCGC GGGCCACUGUUUCACUGUUGCGCUACAUCUCCGGACGACUCUAUACCGCGUGGAUAUGGCACGCAACUUCAAGACGGGCA CCGUAAAUGUCCUCGGGCGUCGUCCGGAGGCCACACGAAAGUGUGGAGUGACCAGUGGCCCCACCCUGAAGGUAAACUUG UAGCGC A,B polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n -16.867 1 19 A 17 A 157 0.329 A_G17:C157_A 1 -9.950 -0.287 -0.362 -0.189 -8.380 1 20 A 18 A 156 2.702 A_U18:A156_A 2 -12.526 -0.076 0.012 -0.194 -1.174 1 20 A 19 A 155 -0.295 A_U19:A155_A 3 -9.449 0.000 0.098 -0.168 -0.600 1 19 A 105 A 33 0.984 A_C105:G33_A 4 -0.738 0.184 -1.182 -0.391 -4.243 1 19 A 106 A 32 -1.067 A_G106:C32_A 5 3.441 -0.170 -0.035 -0.177 -3.414 1 19 A 107 A 31 1.404 A_G107:C31_A 6 3.152 -0.237 0.069 -0.188 0.451 1 20 A 108 A 30 7.922 A_A108:U30_A 7 2.857 -0.037 0.011 -0.024 4.987 1 19 A 109 A 29 3.698 A_G109:C29_A 8 -1.478 -0.223 -0.257 -0.095 -8.300 1 16 A 158 A 28 17.908 A_U158:U28_A 9 -15.386 -3.162 -0.431 -1.815 -5.607 1 20 A 159 A 27 2.361 A_U159:A27_A 10 -7.182 -0.156 -0.394 -0.106 -1.621 1 19 A 160 A 26 1.816 A_G160:C26_A 11 -6.668 -0.189 0.173 -0.174 4.811 1 20 A 161 A 25 4.157 A_U161:A25_A 12 -8.282 -0.030 -0.055 -0.121 4.539 1 20 A 162 A 24 2.795 A_A162:U24_A 13 -5.847 0.124 0.309 -0.137 1.743 1 19 A 163 A 23 0.428 A_G163:C23_A 14 -8.911 -0.246 0.068 -0.189 5.119 1 19 A 164 A 22 4.378 A_C164:G22_A 15 -9.572 0.304 -0.242 -0.158 2.039 1 19 A 165 A 21 1.932 A_G165:C21_A 16 -6.699 -0.152 0.024 -0.100 3.498 1 19 A 166 A 20 -1.298 A_C166:G20_A 17 -6.599 0.197 0.065 -0.239 0.651 1 19 B 1 B 141 1.788 B_G1:C141_B 18 -3.657 -0.229 0.327 -0.230 1.848 1 19 B 2 B 140 0.213 B_G2:C140_B 19 -4.555 -0.166 0.300 -0.210 -0.936 1 19 B 3 B 139 -0.738 B_G3:C139_B 20 -4.429 -0.155 0.222 -0.208 -1.326 1 19 B 4 B 138 1.658 B_C4:G138_B 21 -4.085 0.194 0.293 -0.188 2.626 1 19 B 5 B 137 0.147 B_C5:G137_B 22 -5.127 0.175 0.438 -0.215 -1.448 1 20 B 6 B 136 2.398 B_A6:U136_B 23 -2.444 0.019 0.337 -0.197 -1.715 1 19 B 7 B 135 -1.003 B_C7:G135_B 24 -1.187 0.197 0.495 -0.218 1.659 1 20 B 8 B 134 3.420 B_U8:A134_B 25 -1.077 -0.048 0.593 -0.185 11.715 1 19 B 9 B 133 -0.302 B_G9:C133_B 26 -9.204 -0.166 0.164 -0.124 14.956 B 10 B 132 -26.524 B_U10:C132_B 27 -32.322 -1.951 -1.251 -0.378 2.129 1 20 B 12 B 131 -2.534 B_U12:A131_B 28 -4.000 -0.090 0.426 -0.109 1.573 1 19 B 13 B 130 -0.133 B_C13:G130_B 29 -6.449 0.131 0.269 -0.239 3.150 1 20 B 14 B 129 1.726 B_A14:U129_B 30 -11.304 0.046 0.279 -0.258 1.605 1 19 B 15 B 128 -0.463 B_C15:G128_B 31 -11.759 0.157 0.195 -0.212 -0.077 1 20 B 16 B 127 -1.638 B_U16:A127_B 32 -7.919 -0.054 0.416 -0.182 -0.353 1 19 B 111 B 126 -0.183 B_C111:G126_B 33 -5.652 0.223 0.252 -0.217 -5.432 1 19 B 112 B 125 -1.874 B_C112:G125_B 34 -5.231 0.190 0.607 -0.264 -2.225 1 20 B 113 B 124 2.462 B_A113:U124_B 35 -7.764 0.207 0.628 -0.090 -0.252 1 19 B 114 B 123 1.115 B_C114:G123_B 36 -6.724 0.214 0.137 -0.117 -0.830 1 20 B 115 B 122 0.386 B_A115:U122_B 37 4.160 0.082 -0.241 -0.179 -3.206 1 19 B 116 B 121 1.010 B_C116:G121_B 38 13.502 0.199 -0.155 -0.165 24.007 B 117 B 120 -10.277 B_G117:A120_B 39 16.015 7.027 1.147 -5.584 -24.019 A 120 A 117 -10.280 A_A120:G117_A 40 16.014 -7.027 1.148 -5.584 3.201 1 19 A 121 A 116 1.009 A_G121:C116_A 41 13.493 -0.199 -0.153 -0.165 0.825 1 20 A 122 A 115 0.380 A_U122:A115_A 42 4.164 -0.082 -0.242 -0.179 0.250 1 19 A 123 A 114 1.117 A_G123:C114_A 43 -6.734 -0.215 0.137 -0.117 2.236 1 20 A 124 A 113 2.459 A_U124:A113_A 44 -7.766 -0.209 0.627 -0.090 5.423 1 19 A 125 A 112 -1.866 A_G125:C112_A 45 -5.234 -0.190 0.607 -0.264 0.359 1 19 A 126 A 111 -0.194 A_G126:C111_A 46 -5.654 -0.223 0.253 -0.218 0.089 1 20 A 127 A 16 -1.632 A_A127:U16_A 47 -7.905 0.054 0.416 -0.181 -1.597 1 19 A 128 A 15 -0.472 A_G128:C15_A 48 -11.758 -0.156 0.195 -0.212 -3.147 1 20 A 129 A 14 1.726 A_U129:A14_A 49 -11.302 -0.045 0.280 -0.258 -1.581 1 19 A 130 A 13 -0.133 A_G130:C13_A 50 -6.455 -0.131 0.270 -0.239 -2.118 1 20 A 131 A 12 -2.530 A_A131:U12_A 51 -3.988 0.090 0.425 -0.109 -14.938 A 132 A 10 -26.506 A_C132:U10_A 52 -32.335 1.951 -1.251 -0.378 -11.716 1 19 A 133 A 9 -0.311 A_C133:G9_A 53 -9.187 0.165 0.163 -0.124 -1.647 1 20 A 134 A 8 3.420 A_A134:U8_A 54 -1.068 0.048 0.594 -0.185 1.690 1 19 A 135 A 7 -1.006 A_G135:C7_A 55 -1.170 -0.197 0.493 -0.218 1.439 1 20 A 136 A 6 2.402 A_U136:A6_A 56 -2.434 -0.019 0.337 -0.197 -2.649 1 19 A 137 A 5 0.150 A_G137:C5_A 57 -5.147 -0.175 0.437 -0.216 1.313 1 19 A 138 A 4 1.659 A_G138:C4_A 58 -4.111 -0.194 0.292 -0.187 0.918 1 19 A 139 A 3 -0.728 A_C139:G3_A 59 -4.431 0.155 0.222 -0.208 -1.849 1 19 A 140 A 2 0.212 A_C140:G2_A 60 -4.553 0.166 0.299 -0.210 -0.664 1 19 A 141 A 1 1.776 A_C141:G1_A 61 -3.665 0.228 0.328 -0.230 -3.507 1 19 B 20 B 166 -1.302 B_G20:C166_B 62 -6.596 -0.198 0.065 -0.239 -2.051 1 19 B 21 B 165 1.933 B_C21:G165_B 63 -6.705 0.152 0.024 -0.100 -5.120 1 19 B 22 B 164 4.376 B_G22:C164_B 64 -9.572 -0.304 -0.242 -0.159 -1.743 1 19 B 23 B 163 0.418 B_C23:G163_B 65 -8.892 0.245 0.068 -0.189 -4.542 1 20 B 24 B 162 2.799 B_U24:A162_B 66 -5.836 -0.123 0.310 -0.137 -4.815 1 20 B 25 B 161 4.167 B_A25:U161_B 67 -8.291 0.030 -0.055 -0.121 1.619 1 19 B 26 B 160 1.801 B_C26:G160_B 68 -6.667 0.189 0.172 -0.174 5.586 1 20 B 27 B 159 2.365 B_A27:U159_B 69 -7.173 0.156 -0.396 -0.106 8.283 1 16 B 28 B 158 17.885 B_U28:U158_B 70 -15.381 3.162 -0.431 -1.815 -4.986 1 19 B 29 B 109 3.701 B_C29:G109_B 71 -1.496 0.222 -0.257 -0.095 -0.444 1 20 B 30 B 108 7.922 B_U30:A108_B 72 2.841 0.038 0.011 -0.024 3.416 1 19 B 31 B 107 1.397 B_C31:G107_B 73 3.146 0.237 0.070 -0.188 4.243 1 19 B 32 B 106 -1.075 B_C32:G106_B 74 3.436 0.170 -0.036 -0.178 0.587 1 19 B 33 B 105 0.989 B_G33:C105_B 75 -0.738 -0.184 -1.183 -0.392 -2.004 A 142 B 153 -57.313 A_C142:U153_B 76 -10.628 -4.516 -1.253 -1.985 0.828 1 8 A 143 B 152 -6.653 A_A143:G152_B 77 -6.791 0.163 -0.986 1.072 1.486 1 19 A 144 B 151 -2.599 A_C144:G151_B 78 -2.830 0.204 -0.256 -0.149 1.433 1 A 145 B 150 0.141 A_C145:A150_B 79 -4.671 2.192 -0.465 -0.465 -1.382 1 A 150 B 145 0.161 A_A150:C145_B 80 -4.597 -2.240 -0.493 -0.531 -1.390 1 19 A 151 B 144 -2.584 A_G151:C144_B 81 -2.809 -0.276 -0.285 -0.185 -0.708 1 8 A 152 B 143 -6.626 A_G152:A143_B 82 -6.800 -0.245 -1.019 1.065 2.047 A 153 B 142 -57.286 A_U153:C142_B 83 -10.715 4.452 -1.293 -1.934 -16.862 1 19 B 17 B 157 0.320 B_G17:C157_B 84 -9.952 -0.287 -0.361 -0.189 -8.389 1 20 B 18 B 156 2.707 B_U18:A156_B 85 -12.529 -0.076 0.012 -0.194 -1.179 1 20 B 19 B 155 -0.296 B_U19:A155_B 86 -9.455 -0.001 0.098 -0.168 3.052 33.077 A A 17 18 5.064 A A 157 156 3.094 2.876 -0.655 -0.895 AA_G17U18:A156C157_AA 1 -2.927 5.154 32.828 -2.031 0.684 3.014 32.635 A A 18 19 9.047 A A 156 155 3.135 5.064 0.062 -0.554 AA_U18U19:A155A156_AA 2 -0.729 1.302 32.242 -1.817 -0.230 3.314 30.632 A A 105 106 12.955 A A 33 32 3.748 6.756 -0.563 -1.787 AA_C105G106:C32G33_AA 3 -5.298 10.159 29.431 -4.852 -0.087 2.920 33.005 A A 106 107 7.525 A A 32 31 3.163 4.257 -0.200 -1.771 AA_G106G107:C31C32_AA 4 -3.279 5.797 32.577 -3.793 -0.169 2.949 33.686 A A 107 108 8.740 A A 31 30 3.221 5.046 -0.030 -1.616 AA_G107A108:U30C31_AA 5 1.002 -1.736 33.302 -3.568 0.207 2.793 27.483 A A 108 109 15.370 A A 30 29 3.351 7.198 0.139 -1.684 AA_A108G109:C29U30_AA 6 3.708 -7.918 26.285 -5.244 0.582 -0.126 -5.829 A A 109 158 -47.715 A A 29 28 3.957 3.419 3.932 -3.936 AA_G109U158:U28C29_AA 7 4.614 64.403 -0.998 19.848 64.127 3.442 44.376 A A 158 159 1.808 A A 28 27 3.471 1.365 -0.837 -0.871 AA_U158U159:A27U28_AA 8 0.082 -0.108 44.356 -1.287 1.116 2.952 25.646 A A 159 160 9.466 A A 27 26 3.235 4.181 0.043 -1.466 AA_U159G160:C26A27_AA 9 -1.378 3.119 25.271 -4.429 -0.467 3.126 28.916 A A 160 161 3.163 A A 26 25 3.209 1.577 -0.018 -1.272 AA_G160U161:A25C26_AA 10 2.176 -4.364 28.793 -2.888 0.505 2.631 37.644 A A 161 162 16.131 A A 25 24 3.100 10.285 0.492 -1.345 AA_U161A162:U24A25_AA 11 -0.288 0.451 36.260 -3.279 -0.796 2.730 23.545 A A 162 163 11.363 A A 24 23 3.252 4.600 0.281 -2.451 AA_A162G163:C23U24_AA 12 2.367 -5.847 22.978 -7.435 0.047 3.154 34.099 A A 163 164 4.122 A A 23 22 3.279 2.413 0.004 -1.569 AA_G163C164:G22C23_AA 13 2.700 -4.613 33.911 -3.054 0.416 1.917 33.134 A A 164 165 29.871 A A 22 21 3.174 16.328 -0.048 -1.789 AA_C164G165:C21G22_AA 14 0.533 -0.975 28.926 -5.431 0.160 3.079 29.109 A A 165 166 6.227 A A 21 20 3.284 3.122 0.420 -1.962 AA_G165C166:G20C21_AA 15 1.772 -3.535 28.892 -4.570 -0.457 4.790 -15.331 A B 166 1 -34.048 A B 20 141 3.169 8.527 0.244 -3.899 AB_C166G1:C141G20_BA 16 -2.365 -9.444 -12.532 5.524 -1.608 2.811 32.140 B B 1 2 8.967 B B 141 140 3.103 4.946 0.086 -1.709 BB_G1G2:C140C141_BB 17 -0.214 0.389 31.767 -3.892 -0.190 2.957 36.152 B B 2 3 6.677 B B 140 139 3.161 4.135 0.417 -1.757 BB_G2G3:C139C140_BB 18 0.921 -1.488 35.911 -3.378 -0.551 3.197 38.411 B B 3 4 2.471 B B 139 138 3.265 1.625 0.692 -1.421 BB_G3C4:G138C139_BB 19 -0.388 0.590 38.376 -2.361 -1.100 2.878 37.251 B B 4 5 5.859 B B 138 137 3.082 3.733 0.380 -1.586 BB_C4C5:G137G138_BB 20 -2.859 4.488 36.964 -2.935 -0.942 2.348 33.020 B B 5 6 18.690 B B 137 136 3.045 10.439 -0.331 -1.831 BB_C5A6:U136G137_BB 21 -2.566 4.594 31.267 -4.723 0.214 3.041 35.936 B B 6 7 6.357 B B 136 135 3.250 3.912 -0.017 -1.772 BB_A6C7:G135U136_BB 22 -2.158 3.506 35.666 -3.412 -0.270 2.571 29.636 B B 7 8 12.712 B B 135 134 3.007 6.452 -0.089 -1.725 BB_C7U8:A134G135_BB 23 -0.710 1.399 28.932 -4.547 0.044 2.004 33.054 B B 8 9 19.546 B B 134 133 2.651 10.889 -0.037 -1.484 BB_U8G9:C133A134_BB 24 4.486 -8.052 30.940 -3.966 0.625 2.359 25.184 B B 9 10 7.570 B B 133 132 3.191 3.228 -1.363 -1.338 BB_G9U10:C132C133_BB 25 8.506 -19.945 23.508 -3.900 5.316 3.810 62.096 B B 10 12 25.960 B B 132 131 4.952 26.067 -0.588 -1.809 BB_U10U12:A131C132_BB 26 5.436 -5.414 56.620 -3.457 0.925 2.931 34.633 B B 12 13 7.120 B B 131 130 3.145 4.229 0.081 -1.610 BB_U12C13:G130A131_BB 27 -0.175 0.294 34.381 -3.311 -0.162 2.764 29.228 B B 13 14 9.160 B B 130 129 3.062 4.603 0.015 -1.677 BB_C13A14:U129G130_BB 28 -1.276 2.540 28.843 -4.219 -0.277 3.203 30.343 B B 14 15 4.305 B B 129 128 3.306 2.251 -0.008 -1.298 BB_A14C15:G128U129_BB 29 0.151 -0.288 30.260 -2.931 0.046 3.080 37.996 B B 15 16 8.176 B B 128 127 3.241 5.307 -0.131 -0.985 BB_C15U16:A127G128_BB 30 -0.437 0.673 37.635 -2.169 0.147 2.729 37.267 B B 16 111 11.122 B B 127 126 3.071 7.067 -0.387 -1.537 BB_U16C111:G126A127_BB 31 0.777 -1.222 36.606 -3.243 0.697 2.732 34.661 B B 111 112 11.218 B B 126 125 3.139 6.638 -0.297 -1.965 BB_C111C112:G125G126_BB 32 -2.602 4.396 33.942 -4.224 0.135 1.921 33.869 B B 112 113 21.357 B B 125 124 2.672 12.173 -0.554 -1.731 BB_C112A113:U124G125_BB 33 -1.747 3.065 31.619 -4.397 0.746 3.243 31.520 B B 113 114 0.748 B B 124 123 3.288 0.406 -0.091 -1.505 BB_A113C114:G123U124_BB 34 3.302 -6.089 31.349 -2.846 0.783 2.945 32.352 B B 114 115 13.475 B B 123 122 3.286 7.444 -0.231 -1.165 BB_C114A115:U122G123_BB 35 -0.629 1.140 31.500 -3.361 0.308 3.028 31.930 B B 115 116 9.317 B B 122 121 3.354 5.103 0.214 -1.759 BB_A115C116:G121U122_BB 36 -1.283 2.343 31.505 -4.108 -0.619 2.240 57.512 B B 116 117 8.683 B B 121 120 2.261 8.324 -1.930 -0.910 BB_C116G117:A120G121_BB 37 -4.050 4.224 56.825 -1.257 1.855 2.239 57.514 A A 120 121 8.692 A A 117 116 2.261 8.333 1.931 -0.910 AA_A120G121:C116G117_AA 38 4.041 -4.215 56.826 -1.258 -1.855 3.027 31.929 A A 121 122 9.333 A A 116 115 3.354 5.111 -0.215 -1.759 AA_G121U122:A115C116_AA 39 1.293 -2.361 31.502 -4.109 0.622 2.946 32.342 A A 122 123 13.463 A A 115 114 3.286 7.435 0.231 -1.165 AA_U122G123:C114A115_AA 40 0.610 -1.105 31.492 -3.360 -0.310 3.243 31.519 A A 123 124 0.751 A A 114 113 3.288 0.407 0.090 -1.505 AA_G123U124:A113C114_AA 41 -3.287 6.062 31.349 -2.847 -0.779 1.923 33.867 A A 124 125 21.337 A A 113 112 2.673 12.161 0.555 -1.730 AA_U124G125:C112A113_AA 42 1.743 -3.058 31.621 -4.396 -0.748 2.731 34.672 A A 125 126 11.236 A A 112 111 3.138 6.651 0.296 -1.966 AA_G125G126:C111C112_AA 43 2.591 -4.376 33.951 -4.224 -0.136 2.729 37.259 A A 126 127 11.121 A A 111 16 3.071 7.065 0.387 -1.537 AA_G126A127:U16C111_AA 44 -0.769 1.210 36.598 -3.244 -0.697 3.080 37.999 A A 127 128 8.173 A A 16 15 3.241 5.305 0.131 -0.985 AA_A127G128:C15U16_AA 45 0.432 -0.666 37.638 -2.169 -0.147 3.204 30.343 A A 128 129 4.304 A A 15 14 3.307 2.251 0.009 -1.298 AA_G128U129:A14C15_AA 46 -0.154 0.295 30.261 -2.931 -0.047 2.765 29.224 A A 129 130 9.138 A A 14 13 3.062 4.591 -0.014 -1.677 AA_U129G130:C13A14_AA 47 1.280 -2.547 28.841 -4.218 0.278 2.930 34.633 A A 130 131 7.134 A A 13 12 3.144 4.237 -0.081 -1.610 AA_G130A131:U12C13_AA 48 0.184 -0.309 34.380 -3.313 0.163 3.809 62.104 A A 131 132 25.977 A A 12 10 4.952 26.086 0.588 -1.809 AA_A131C132:U10U12_AA 49 -5.440 5.417 56.620 -3.457 -0.925 2.360 25.178 A A 132 133 7.551 A A 10 9 3.192 3.219 1.361 -1.337 AA_C132C133:G9U10_AA 50 -8.517 19.977 23.498 -3.898 -5.318 2.004 33.063 A A 133 134 19.527 A A 9 8 2.651 10.881 0.038 -1.484 AA_C133A134:U8G9_AA 51 -4.498 8.071 30.950 -3.963 -0.626 2.573 29.630 A A 134 135 12.705 A A 8 7 3.008 6.447 0.089 -1.725 AA_A134G135:C7U8_AA 52 0.726 -1.431 28.927 -4.548 -0.042 3.040 35.942 A A 135 136 6.369 A A 7 6 3.250 3.920 0.018 -1.772 AA_G135U136:A6C7_AA 53 2.157 -3.504 35.672 -3.411 0.269 2.348 33.021 A A 136 137 18.698 A A 6 5 3.045 10.444 0.331 -1.831 AA_U136G137:C5A6_AA 54 2.576 -4.611 31.266 -4.723 -0.212 2.877 37.249 A A 137 138 5.870 A A 5 4 3.082 3.740 -0.380 -1.585 AA_G137G138:C4C5_AA 55 2.853 -4.477 36.961 -2.936 0.941 3.198 38.411 A A 138 139 2.452 A A 4 3 3.265 1.613 -0.691 -1.421 AA_G138C139:G3C4_AA 56 0.384 -0.584 38.376 -2.359 1.098 2.955 36.154 A A 139 140 6.691 A A 3 2 3.160 4.144 -0.417 -1.756 AA_C139C140:G2G3_AA 57 -0.911 1.471 35.912 -3.378 0.552 2.812 32.139 A A 140 141 8.968 A A 2 1 3.103 4.946 -0.086 -1.709 AA_C140C141:G1G2_AA 58 0.211 -0.383 31.765 -3.893 0.190 4.800 -15.328 A B 141 20 -34.137 A B 1 166 3.196 8.548 -0.155 -3.891 AB_C141G20:C166G1_BA 59 2.274 9.081 -12.531 5.433 1.854 3.080 29.111 B B 20 21 6.211 B B 166 165 3.284 3.114 -0.420 -1.962 BB_G20C21:G165C166_BB 60 -1.778 3.546 28.894 -4.569 0.455 1.915 33.142 B B 21 22 29.883 B B 165 164 3.173 16.338 0.048 -1.789 BB_C21G22:C164G165_BB 61 -0.529 0.968 28.929 -5.431 -0.159 3.155 34.087 B B 22 23 4.114 B B 164 163 3.279 2.407 -0.004 -1.570 BB_G22C23:G163C164_BB 62 -2.700 4.614 33.900 -3.055 -0.416 2.729 23.559 B B 23 24 11.365 B B 163 162 3.251 4.603 -0.281 -2.451 BB_C23U24:A162G163_BB 63 -2.371 5.854 22.991 -7.431 -0.049 2.631 37.646 B B 24 25 16.123 B B 162 161 3.100 10.281 -0.492 -1.345 BB_U24A25:U161A162_BB 64 0.290 -0.454 36.263 -3.278 0.796 3.127 28.912 B B 25 26 3.147 B B 161 160 3.209 1.569 0.018 -1.272 BB_A25C26:G160U161_BB 65 -2.169 4.351 28.791 -2.886 -0.503 2.952 25.645 B B 26 27 9.480 B B 160 159 3.236 4.188 -0.042 -1.466 BB_C26A27:U159G160_BB 66 1.386 -3.137 25.269 -4.431 0.468 3.442 44.378 B B 27 28 1.811 B B 159 158 3.471 1.368 0.836 -0.871 BB_A27U28:U158U159_BB 67 -0.095 0.125 44.358 -1.287 -1.117 -0.112 -5.825 B B 28 29 -47.744 B B 158 109 3.956 3.422 -3.931 -3.937 BB_U28C29:G109U158_BB 68 -4.606 -64.266 -1.006 19.793 -64.179 2.793 27.491 B B 29 30 15.362 B B 109 108 3.351 7.196 -0.139 -1.684 BB_C29U30:A108G109_BB 69 -3.714 7.929 26.293 -5.243 -0.584 2.949 33.684 B B 30 31 8.747 B B 108 107 3.221 5.050 0.030 -1.617 BB_U30C31:G107A108_BB 70 -1.001 1.735 33.299 -3.569 -0.206 2.921 33.001 B B 31 32 7.515 B B 107 106 3.163 4.251 0.200 -1.771 BB_C31C32:G106G107_BB 71 3.287 -5.810 32.573 -3.792 0.170 3.316 30.639 B B 32 33 12.947 B B 106 105 3.749 6.754 0.563 -1.787 BB_C32G33:C105G106_BB 72 5.304 -10.168 29.438 -4.850 0.088 3.297 47.773 A A 142 143 2.007 B B 153 152 3.407 1.625 1.948 -1.463 AA_C142A143:G152U153_BB 73 -1.552 1.917 47.723 -1.940 -2.532 3.058 27.504 A A 143 144 2.608 B B 152 151 3.258 1.233 0.386 -1.695 AA_A143C144:G151G152_BB 74 -5.035 10.652 27.020 -3.860 -2.016 3.292 32.290 A A 144 145 1.402 B B 151 150 3.318 0.779 -0.872 -1.831 AA_C144C145:A150G151_BB 75 -0.683 1.229 32.274 -3.433 1.446 3.291 32.293 A A 150 151 1.371 B B 145 144 3.317 0.762 0.872 -1.831 AA_A150G151:C144C145_BB 76 0.673 -1.211 32.277 -3.429 -1.447 3.058 27.497 A A 151 152 2.621 B B 144 143 3.259 1.239 -0.386 -1.695 AA_G151G152:A143C144_BB 77 5.046 -10.677 27.011 -3.862 2.019 3.299 47.773 A A 152 153 2.004 B B 143 142 3.409 1.623 -1.948 -1.463 AA_G152U153:C142A143_BB 78 1.546 -1.910 47.724 -1.939 2.531 3.053 33.073 B B 17 18 5.064 B B 157 156 3.095 2.875 -0.654 -0.896 BB_G17U18:A156C157_BB 79 -2.925 5.150 32.824 -2.032 0.683 3.014 32.635 B B 18 19 9.051 B B 156 155 3.135 5.066 0.062 -0.554 BB_U18U19:A155A156_BB 80 -0.725 1.296 32.242 -1.817 -0.230 repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release 1 0 2026-03-04 1 0 2026-03-04 1 0 1 2026-03-04 1 0 1 2026-03-04 1 0 2 2026-03-04 1 0 2026-03-04 1 0 1 2026-03-04 1 0 2026-03-04 United States National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI) adrian.ferre@nih.gov 0000-0003-4549-1619 Adrian Ferre-D'Amare principal investigator/group leader Scaffold attached to quinine-I aptamer (Tonic) local refinement of core N RCSB Y RCSB 2025-02-18 REL K POTASSIUM ION HOH water 32630 synthetic construct sample 1 166 N N K 2 2 K K 201 A K 1 2 K K 201 B HOH 244 3 HOH HOH 301 A HOH 88 3 HOH HOH 302 A HOH 9 3 HOH HOH 303 A HOH 52 3 HOH HOH 304 A HOH 77 3 HOH HOH 305 A HOH 139 3 HOH HOH 306 A HOH 123 3 HOH HOH 307 A HOH 169 3 HOH HOH 308 A HOH 325 3 HOH HOH 309 A HOH 309 3 HOH HOH 310 A HOH 127 3 HOH HOH 311 A HOH 71 3 HOH HOH 312 A HOH 232 3 HOH HOH 313 A HOH 155 3 HOH HOH 314 A HOH 22 3 HOH HOH 315 A HOH 89 3 HOH HOH 316 A HOH 81 3 HOH HOH 317 A HOH 277 3 HOH HOH 318 A HOH 209 3 HOH HOH 319 A HOH 103 3 HOH HOH 320 A HOH 170 3 HOH HOH 321 A HOH 182 3 HOH HOH 322 A HOH 360 3 HOH HOH 323 A HOH 92 3 HOH HOH 324 A HOH 45 3 HOH HOH 325 A HOH 28 3 HOH HOH 326 A HOH 258 3 HOH HOH 327 A HOH 32 3 HOH HOH 328 A HOH 253 3 HOH HOH 329 A HOH 58 3 HOH HOH 330 A HOH 128 3 HOH HOH 331 A HOH 337 3 HOH HOH 332 A HOH 36 3 HOH HOH 333 A HOH 57 3 HOH HOH 334 A HOH 256 3 HOH HOH 335 A HOH 43 3 HOH HOH 336 A HOH 106 3 HOH HOH 337 A HOH 266 3 HOH HOH 338 A HOH 13 3 HOH HOH 339 A HOH 308 3 HOH HOH 340 A HOH 63 3 HOH HOH 341 A HOH 39 3 HOH HOH 342 A HOH 102 3 HOH HOH 343 A HOH 281 3 HOH HOH 344 A HOH 51 3 HOH HOH 345 A HOH 179 3 HOH HOH 346 A HOH 387 3 HOH HOH 347 A HOH 257 3 HOH HOH 348 A HOH 305 3 HOH HOH 349 A HOH 380 3 HOH HOH 350 A HOH 191 3 HOH HOH 351 A HOH 146 3 HOH HOH 352 A HOH 366 3 HOH HOH 353 A HOH 6 3 HOH HOH 354 A HOH 95 3 HOH HOH 355 A HOH 383 3 HOH HOH 356 A HOH 184 3 HOH HOH 357 A HOH 3 3 HOH HOH 358 A HOH 183 3 HOH HOH 359 A HOH 272 3 HOH HOH 360 A HOH 85 3 HOH HOH 361 A HOH 148 3 HOH HOH 362 A HOH 132 3 HOH HOH 363 A HOH 341 3 HOH HOH 364 A HOH 70 3 HOH HOH 365 A HOH 208 3 HOH HOH 366 A HOH 323 3 HOH HOH 367 A HOH 359 3 HOH HOH 368 A HOH 372 3 HOH HOH 369 A HOH 47 3 HOH HOH 370 A HOH 376 3 HOH HOH 371 A HOH 134 3 HOH HOH 372 A HOH 2 3 HOH HOH 373 A HOH 27 3 HOH HOH 374 A HOH 222 3 HOH HOH 375 A HOH 73 3 HOH HOH 376 A HOH 207 3 HOH HOH 377 A HOH 304 3 HOH HOH 378 A HOH 291 3 HOH HOH 379 A HOH 178 3 HOH HOH 380 A HOH 377 3 HOH HOH 381 A HOH 367 3 HOH HOH 382 A HOH 118 3 HOH HOH 383 A HOH 165 3 HOH HOH 384 A HOH 252 3 HOH HOH 385 A HOH 108 3 HOH HOH 386 A HOH 221 3 HOH HOH 387 A HOH 228 3 HOH HOH 388 A HOH 220 3 HOH HOH 389 A HOH 326 3 HOH HOH 390 A HOH 276 3 HOH HOH 391 A HOH 355 3 HOH HOH 392 A HOH 195 3 HOH HOH 393 A HOH 117 3 HOH HOH 394 A HOH 141 3 HOH HOH 395 A HOH 243 3 HOH HOH 396 A HOH 378 3 HOH HOH 397 A HOH 7 3 HOH HOH 398 A HOH 185 3 HOH HOH 399 A HOH 166 3 HOH HOH 400 A HOH 201 3 HOH HOH 401 A HOH 245 3 HOH HOH 402 A HOH 282 3 HOH HOH 403 A HOH 354 3 HOH HOH 404 A HOH 154 3 HOH HOH 405 A HOH 290 3 HOH HOH 406 A HOH 114 3 HOH HOH 407 A HOH 386 3 HOH HOH 408 A HOH 210 3 HOH HOH 409 A HOH 347 3 HOH HOH 410 A HOH 49 3 HOH HOH 411 A HOH 93 3 HOH HOH 412 A HOH 149 3 HOH HOH 413 A HOH 194 3 HOH HOH 414 A HOH 262 3 HOH HOH 415 A HOH 312 3 HOH HOH 416 A HOH 59 3 HOH HOH 417 A HOH 361 3 HOH HOH 418 A HOH 267 3 HOH HOH 419 A HOH 62 3 HOH HOH 420 A HOH 229 3 HOH HOH 421 A HOH 33 3 HOH HOH 422 A HOH 16 3 HOH HOH 423 A HOH 107 3 HOH HOH 424 A HOH 26 3 HOH HOH 425 A HOH 234 3 HOH HOH 426 A HOH 164 3 HOH HOH 427 A HOH 174 3 HOH HOH 428 A HOH 147 3 HOH HOH 429 A HOH 297 3 HOH HOH 430 A HOH 20 3 HOH HOH 431 A HOH 269 3 HOH HOH 432 A HOH 353 3 HOH HOH 433 A HOH 68 3 HOH HOH 434 A HOH 249 3 HOH HOH 435 A HOH 17 3 HOH HOH 436 A HOH 365 3 HOH HOH 437 A HOH 94 3 HOH HOH 438 A HOH 84 3 HOH HOH 439 A HOH 275 3 HOH HOH 440 A HOH 328 3 HOH HOH 441 A HOH 293 3 HOH HOH 442 A HOH 38 3 HOH HOH 443 A HOH 10 3 HOH HOH 444 A HOH 124 3 HOH HOH 445 A HOH 265 3 HOH HOH 446 A HOH 158 3 HOH HOH 447 A HOH 151 3 HOH HOH 448 A HOH 283 3 HOH HOH 449 A HOH 327 3 HOH HOH 450 A HOH 371 3 HOH HOH 451 A HOH 21 3 HOH HOH 452 A HOH 133 3 HOH HOH 453 A HOH 153 3 HOH HOH 454 A HOH 115 3 HOH HOH 455 A HOH 237 3 HOH HOH 456 A HOH 349 3 HOH HOH 457 A HOH 175 3 HOH HOH 458 A HOH 72 3 HOH HOH 459 A HOH 313 3 HOH HOH 460 A HOH 388 3 HOH HOH 461 A HOH 190 3 HOH HOH 462 A HOH 211 3 HOH HOH 463 A HOH 109 3 HOH HOH 464 A HOH 238 3 HOH HOH 465 A HOH 213 3 HOH HOH 466 A HOH 125 3 HOH HOH 467 A HOH 199 3 HOH HOH 468 A HOH 206 3 HOH HOH 469 A HOH 91 3 HOH HOH 470 A HOH 61 3 HOH HOH 471 A HOH 350 3 HOH HOH 472 A HOH 200 3 HOH HOH 473 A HOH 348 3 HOH HOH 474 A HOH 44 3 HOH HOH 475 A HOH 163 3 HOH HOH 476 A HOH 338 3 HOH HOH 477 A HOH 298 3 HOH HOH 478 A HOH 231 3 HOH HOH 479 A HOH 159 3 HOH HOH 480 A HOH 140 3 HOH HOH 481 A HOH 342 3 HOH HOH 482 A HOH 299 3 HOH HOH 483 A HOH 212 3 HOH HOH 484 A HOH 336 3 HOH HOH 485 A HOH 292 3 HOH HOH 486 A HOH 324 3 HOH HOH 487 A HOH 236 3 HOH HOH 488 A HOH 300 3 HOH HOH 489 A HOH 223 3 HOH HOH 490 A HOH 317 3 HOH HOH 491 A HOH 316 3 HOH HOH 492 A HOH 284 3 HOH HOH 493 A HOH 74 3 HOH HOH 494 A HOH 329 3 HOH HOH 495 A HOH 246 3 HOH HOH 496 A HOH 247 3 HOH HOH 497 A HOH 87 3 HOH HOH 301 B HOH 53 3 HOH HOH 302 B HOH 11 3 HOH HOH 303 B HOH 310 3 HOH HOH 304 B HOH 55 3 HOH HOH 305 B HOH 225 3 HOH HOH 306 B HOH 137 3 HOH HOH 307 B HOH 230 3 HOH HOH 308 B HOH 259 3 HOH HOH 309 B HOH 321 3 HOH HOH 310 B HOH 122 3 HOH HOH 311 B HOH 78 3 HOH HOH 312 B HOH 82 3 HOH HOH 313 B HOH 90 3 HOH HOH 314 B HOH 23 3 HOH HOH 315 B HOH 76 3 HOH HOH 316 B HOH 156 3 HOH HOH 317 B HOH 214 3 HOH HOH 318 B HOH 181 3 HOH HOH 319 B HOH 129 3 HOH HOH 320 B HOH 104 3 HOH HOH 321 B HOH 65 3 HOH HOH 322 B HOH 264 3 HOH HOH 323 B HOH 97 3 HOH HOH 324 B HOH 390 3 HOH HOH 325 B HOH 30 3 HOH HOH 326 B HOH 172 3 HOH HOH 327 B HOH 130 3 HOH HOH 328 B HOH 307 3 HOH HOH 329 B HOH 54 3 HOH HOH 330 B HOH 15 3 HOH HOH 331 B HOH 31 3 HOH HOH 332 B HOH 171 3 HOH HOH 333 B HOH 187 3 HOH HOH 334 B HOH 35 3 HOH HOH 335 B HOH 279 3 HOH HOH 336 B HOH 56 3 HOH HOH 337 B HOH 105 3 HOH HOH 338 B HOH 37 3 HOH HOH 339 B HOH 306 3 HOH HOH 340 B HOH 5 3 HOH HOH 341 B HOH 192 3 HOH HOH 342 B HOH 362 3 HOH HOH 343 B HOH 278 3 HOH HOH 344 B HOH 254 3 HOH HOH 345 B HOH 260 3 HOH HOH 346 B HOH 382 3 HOH HOH 347 B HOH 131 3 HOH HOH 348 B HOH 86 3 HOH HOH 349 B HOH 143 3 HOH HOH 350 B HOH 46 3 HOH HOH 351 B HOH 4 3 HOH HOH 352 B HOH 202 3 HOH HOH 353 B HOH 180 3 HOH HOH 354 B HOH 319 3 HOH HOH 355 B HOH 381 3 HOH HOH 356 B HOH 270 3 HOH HOH 357 B HOH 99 3 HOH HOH 358 B HOH 42 3 HOH HOH 359 B HOH 186 3 HOH HOH 360 B HOH 145 3 HOH HOH 361 B HOH 204 3 HOH HOH 362 B HOH 69 3 HOH HOH 363 B HOH 343 3 HOH HOH 364 B HOH 248 3 HOH HOH 365 B HOH 1 3 HOH HOH 366 B HOH 224 3 HOH HOH 367 B HOH 80 3 HOH HOH 368 B HOH 101 3 HOH HOH 369 B HOH 255 3 HOH HOH 370 B HOH 242 3 HOH HOH 371 B HOH 358 3 HOH HOH 372 B HOH 368 3 HOH HOH 373 B HOH 177 3 HOH HOH 374 B HOH 48 3 HOH HOH 375 B HOH 384 3 HOH HOH 376 B HOH 352 3 HOH HOH 377 B HOH 136 3 HOH HOH 378 B HOH 29 3 HOH HOH 379 B HOH 345 3 HOH HOH 380 B HOH 374 3 HOH HOH 381 B HOH 373 3 HOH HOH 382 B HOH 120 3 HOH HOH 383 B HOH 335 3 HOH HOH 384 B HOH 375 3 HOH HOH 385 B HOH 251 3 HOH HOH 386 B HOH 263 3 HOH HOH 387 B HOH 369 3 HOH HOH 388 B HOH 322 3 HOH HOH 389 B HOH 203 3 HOH HOH 390 B HOH 168 3 HOH HOH 391 B HOH 273 3 HOH HOH 392 B HOH 167 3 HOH HOH 393 B HOH 303 3 HOH HOH 394 B HOH 152 3 HOH HOH 395 B HOH 142 3 HOH HOH 396 B HOH 288 3 HOH HOH 397 B HOH 8 3 HOH HOH 398 B HOH 379 3 HOH HOH 399 B HOH 219 3 HOH HOH 400 B HOH 226 3 HOH HOH 401 B HOH 311 3 HOH HOH 402 B HOH 34 3 HOH HOH 403 B HOH 363 3 HOH HOH 404 B HOH 357 3 HOH HOH 405 B HOH 119 3 HOH HOH 406 B HOH 227 3 HOH HOH 407 B HOH 280 3 HOH HOH 408 B HOH 113 3 HOH HOH 409 B HOH 356 3 HOH HOH 410 B HOH 289 3 HOH HOH 411 B HOH 330 3 HOH HOH 412 B HOH 25 3 HOH HOH 413 B HOH 50 3 HOH HOH 414 B HOH 150 3 HOH HOH 415 B HOH 215 3 HOH HOH 416 B HOH 385 3 HOH HOH 417 B HOH 196 3 HOH HOH 418 B HOH 271 3 HOH HOH 419 B HOH 268 3 HOH HOH 420 B HOH 193 3 HOH HOH 421 B HOH 250 3 HOH HOH 422 B HOH 173 3 HOH HOH 423 B HOH 144 3 HOH HOH 424 B HOH 111 3 HOH HOH 425 B HOH 14 3 HOH HOH 426 B HOH 64 3 HOH HOH 427 B HOH 241 3 HOH HOH 428 B HOH 235 3 HOH HOH 429 B HOH 189 3 HOH HOH 430 B HOH 161 3 HOH HOH 431 B HOH 19 3 HOH HOH 432 B HOH 121 3 HOH HOH 433 B HOH 67 3 HOH HOH 434 B HOH 294 3 HOH HOH 435 B HOH 112 3 HOH HOH 436 B HOH 83 3 HOH HOH 437 B HOH 60 3 HOH HOH 438 B HOH 110 3 HOH HOH 439 B HOH 188 3 HOH HOH 440 B HOH 364 3 HOH HOH 441 B HOH 274 3 HOH HOH 442 B HOH 100 3 HOH HOH 443 B HOH 351 3 HOH HOH 444 B HOH 295 3 HOH HOH 445 B HOH 18 3 HOH HOH 446 B HOH 197 3 HOH HOH 447 B HOH 12 3 HOH HOH 448 B HOH 135 3 HOH HOH 449 B HOH 285 3 HOH HOH 450 B HOH 24 3 HOH HOH 451 B HOH 116 3 HOH HOH 452 B HOH 261 3 HOH HOH 453 B HOH 40 3 HOH HOH 454 B HOH 157 3 HOH HOH 455 B HOH 98 3 HOH HOH 456 B HOH 370 3 HOH HOH 457 B HOH 162 3 HOH HOH 458 B HOH 331 3 HOH HOH 459 B HOH 389 3 HOH HOH 460 B HOH 218 3 HOH HOH 461 B HOH 205 3 HOH HOH 462 B HOH 346 3 HOH HOH 463 B HOH 240 3 HOH HOH 464 B HOH 344 3 HOH HOH 465 B HOH 233 3 HOH HOH 466 B HOH 176 3 HOH HOH 467 B HOH 66 3 HOH HOH 468 B HOH 198 3 HOH HOH 469 B HOH 339 3 HOH HOH 470 B HOH 96 3 HOH HOH 471 B HOH 126 3 HOH HOH 472 B HOH 216 3 HOH HOH 473 B HOH 340 3 HOH HOH 474 B HOH 239 3 HOH HOH 475 B HOH 79 3 HOH HOH 476 B HOH 320 3 HOH HOH 477 B HOH 296 3 HOH HOH 478 B HOH 160 3 HOH HOH 479 B HOH 217 3 HOH HOH 480 B HOH 138 3 HOH HOH 481 B HOH 41 3 HOH HOH 482 B HOH 287 3 HOH HOH 483 B HOH 301 3 HOH HOH 484 B HOH 302 3 HOH HOH 485 B HOH 334 3 HOH HOH 486 B HOH 333 3 HOH HOH 487 B HOH 314 3 HOH HOH 488 B HOH 318 3 HOH HOH 489 B HOH 75 3 HOH HOH 490 B HOH 332 3 HOH HOH 491 B HOH 286 3 HOH HOH 492 B HOH 315 3 HOH HOH 493 B G 1 n 1 G 1 A G 2 n 2 G 2 A G 3 n 3 G 3 A C 4 n 4 C 4 A C 5 n 5 C 5 A A 6 n 6 A 6 A C 7 n 7 C 7 A U 8 n 8 U 8 A G 9 n 9 G 9 A U 10 n 10 U 10 A U 11 n 11 U 11 A U 12 n 12 U 12 A C 13 n 13 C 13 A A 14 n 14 A 14 A C 15 n 15 C 15 A U 16 n 16 U 16 A G 17 n 17 G 17 A U 18 n 18 U 18 A U 19 n 19 U 19 A G 20 n 20 G 20 A C 21 n 21 C 21 A G 22 n 22 G 22 A C 23 n 23 C 23 A U 24 n 24 U 24 A A 25 n 25 A 25 A C 26 n 26 C 26 A A 27 n 27 A 27 A U 28 n 28 U 28 A C 29 n 29 C 29 A U 30 n 30 U 30 A C 31 n 31 C 31 A C 32 n 32 C 32 A G 33 n 33 G 33 A n 34 34 A n 35 35 A n 36 36 A n 37 37 A n 38 38 A n 39 39 A n 40 40 A n 41 41 A n 42 42 A n 43 43 A n 44 44 A n 45 45 A n 46 46 A n 47 47 A n 48 48 A n 49 49 A n 50 50 A n 51 51 A n 52 52 A n 53 53 A n 54 54 A n 55 55 A n 56 56 A n 57 57 A n 58 58 A n 59 59 A n 60 60 A n 61 61 A n 62 62 A n 63 63 A n 64 64 A n 65 65 A n 66 66 A n 67 67 A n 68 68 A n 69 69 A n 70 70 A n 71 71 A n 72 72 A n 73 73 A n 74 74 A n 75 75 A n 76 76 A n 77 77 A n 78 78 A n 79 79 A n 80 80 A n 81 81 A n 82 82 A n 83 83 A n 84 84 A n 85 85 A n 86 86 A n 87 87 A n 88 88 A n 89 89 A n 90 90 A n 91 91 A n 92 92 A n 93 93 A n 94 94 A n 95 95 A n 96 96 A n 97 97 A n 98 98 A n 99 99 A n 100 100 A n 101 101 A n 102 102 A n 103 103 A n 104 104 A C 105 n 105 C 105 A G 106 n 106 G 106 A G 107 n 107 G 107 A A 108 n 108 A 108 A G 109 n 109 G 109 A G 110 n 110 G 110 A C 111 n 111 C 111 A C 112 n 112 C 112 A A 113 n 113 A 113 A C 114 n 114 C 114 A A 115 n 115 A 115 A C 116 n 116 C 116 A G 117 n 117 G 117 A A 118 n 118 A 118 A A 119 n 119 A 119 A A 120 n 120 A 120 A G 121 n 121 G 121 A U 122 n 122 U 122 A G 123 n 123 G 123 A U 124 n 124 U 124 A G 125 n 125 G 125 A G 126 n 126 G 126 A A 127 n 127 A 127 A G 128 n 128 G 128 A U 129 n 129 U 129 A G 130 n 130 G 130 A A 131 n 131 A 131 A C 132 n 132 C 132 A C 133 n 133 C 133 A A 134 n 134 A 134 A G 135 n 135 G 135 A U 136 n 136 U 136 A G 137 n 137 G 137 A G 138 n 138 G 138 A C 139 n 139 C 139 A C 140 n 140 C 140 A C 141 n 141 C 141 A C 142 n 142 C 142 A A 143 n 143 A 143 A C 144 n 144 C 144 A C 145 n 145 C 145 A n 146 146 A n 147 147 A n 148 148 A n 149 149 A A 150 n 150 A 150 A G 151 n 151 G 151 A G 152 n 152 G 152 A U 153 n 153 U 153 A A 154 n 154 A 154 A A 155 n 155 A 155 A A 156 n 156 A 156 A C 157 n 157 C 157 A U 158 n 158 U 158 A U 159 n 159 U 159 A G 160 n 160 G 160 A U 161 n 161 U 161 A A 162 n 162 A 162 A G 163 n 163 G 163 A C 164 n 164 C 164 A G 165 n 165 G 165 A C 166 n 166 C 166 A G 1 n 1 G 1 B G 2 n 2 G 2 B G 3 n 3 G 3 B C 4 n 4 C 4 B C 5 n 5 C 5 B A 6 n 6 A 6 B C 7 n 7 C 7 B U 8 n 8 U 8 B G 9 n 9 G 9 B U 10 n 10 U 10 B U 11 n 11 U 11 B U 12 n 12 U 12 B C 13 n 13 C 13 B A 14 n 14 A 14 B C 15 n 15 C 15 B U 16 n 16 U 16 B G 17 n 17 G 17 B U 18 n 18 U 18 B U 19 n 19 U 19 B G 20 n 20 G 20 B C 21 n 21 C 21 B G 22 n 22 G 22 B C 23 n 23 C 23 B U 24 n 24 U 24 B A 25 n 25 A 25 B C 26 n 26 C 26 B A 27 n 27 A 27 B U 28 n 28 U 28 B C 29 n 29 C 29 B U 30 n 30 U 30 B C 31 n 31 C 31 B C 32 n 32 C 32 B G 33 n 33 G 33 B n 34 34 B n 35 35 B n 36 36 B n 37 37 B n 38 38 B n 39 39 B n 40 40 B n 41 41 B n 42 42 B n 43 43 B n 44 44 B n 45 45 B n 46 46 B n 47 47 B n 48 48 B n 49 49 B n 50 50 B n 51 51 B n 52 52 B n 53 53 B n 54 54 B n 55 55 B n 56 56 B n 57 57 B n 58 58 B n 59 59 B n 60 60 B n 61 61 B n 62 62 B n 63 63 B n 64 64 B n 65 65 B n 66 66 B n 67 67 B n 68 68 B n 69 69 B n 70 70 B n 71 71 B n 72 72 B n 73 73 B n 74 74 B n 75 75 B n 76 76 B n 77 77 B n 78 78 B n 79 79 B n 80 80 B n 81 81 B n 82 82 B n 83 83 B n 84 84 B n 85 85 B n 86 86 B n 87 87 B n 88 88 B n 89 89 B n 90 90 B n 91 91 B n 92 92 B n 93 93 B n 94 94 B n 95 95 B n 96 96 B n 97 97 B n 98 98 B n 99 99 B n 100 100 B n 101 101 B n 102 102 B n 103 103 B n 104 104 B C 105 n 105 C 105 B G 106 n 106 G 106 B G 107 n 107 G 107 B A 108 n 108 A 108 B G 109 n 109 G 109 B G 110 n 110 G 110 B C 111 n 111 C 111 B C 112 n 112 C 112 B A 113 n 113 A 113 B C 114 n 114 C 114 B A 115 n 115 A 115 B C 116 n 116 C 116 B G 117 n 117 G 117 B A 118 n 118 A 118 B A 119 n 119 A 119 B A 120 n 120 A 120 B G 121 n 121 G 121 B U 122 n 122 U 122 B G 123 n 123 G 123 B U 124 n 124 U 124 B G 125 n 125 G 125 B G 126 n 126 G 126 B A 127 n 127 A 127 B G 128 n 128 G 128 B U 129 n 129 U 129 B G 130 n 130 G 130 B A 131 n 131 A 131 B C 132 n 132 C 132 B C 133 n 133 C 133 B A 134 n 134 A 134 B G 135 n 135 G 135 B U 136 n 136 U 136 B G 137 n 137 G 137 B G 138 n 138 G 138 B C 139 n 139 C 139 B C 140 n 140 C 140 B C 141 n 141 C 141 B C 142 n 142 C 142 B A 143 n 143 A 143 B C 144 n 144 C 144 B C 145 n 145 C 145 B n 146 146 B n 147 147 B n 148 148 B n 149 149 B A 150 n 150 A 150 B G 151 n 151 G 151 B G 152 n 152 G 152 B U 153 n 153 U 153 B A 154 n 154 A 154 B A 155 n 155 A 155 B A 156 n 156 A 156 B C 157 n 157 C 157 B U 158 n 158 U 158 B U 159 n 159 U 159 B G 160 n 160 G 160 B U 161 n 161 U 161 B A 162 n 162 A 162 B G 163 n 163 G 163 B C 164 n 164 C 164 B G 165 n 165 G 165 B C 166 n 166 C 166 B author_defined_assembly 2 dimeric not applicable electron microscopy A G 109 A O3' G 109 1_555 A K 201 C K K 1_555 A G 109 A O2' G 109 1_555 47.1 A G 109 A O3' G 109 1_555 A K 201 C K K 1_555 A HOH 364 E O HOH 1_555 80.1 A G 109 A O2' G 109 1_555 A K 201 C K K 1_555 A HOH 364 E O HOH 1_555 126.5 B G 109 B O3' G 109 1_555 B K 201 D K K 1_555 B G 109 B O2' G 109 1_555 47.1 B G 109 B O3' G 109 1_555 B K 201 D K K 1_555 B HOH 364 F O HOH 1_555 79.8 B G 109 B O2' G 109 1_555 B K 201 D K K 1_555 B HOH 364 F O HOH 1_555 126.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 1 A G 34 A G 34 1 Y 1 A A 35 A A 35 1 Y 1 A C 36 A C 36 1 Y 1 A G 37 A G 37 1 Y 1 A A 38 A A 38 1 Y 1 A C 39 A C 39 1 Y 1 A U 40 A U 40 1 Y 1 A C 41 A C 41 1 Y 1 A U 42 A U 42 1 Y 1 A A 43 A A 43 1 Y 1 A U 44 A U 44 1 Y 1 A A 45 A A 45 1 Y 1 A C 46 A C 46 1 Y 1 A C 47 A C 47 1 Y 1 A G 48 A G 48 1 Y 1 A C 49 A C 49 1 Y 1 A G 50 A G 50 1 Y 1 A U 51 A U 51 1 Y 1 A G 52 A G 52 1 Y 1 A G 53 A G 53 1 Y 1 A A 54 A A 54 1 Y 1 A U 55 A U 55 1 Y 1 A A 56 A A 56 1 Y 1 A U 57 A U 57 1 Y 1 A G 58 A G 58 1 Y 1 A G 59 A G 59 1 Y 1 A C 60 A C 60 1 Y 1 A A 61 A A 61 1 Y 1 A C 62 A C 62 1 Y 1 A G 63 A G 63 1 Y 1 A C 64 A C 64 1 Y 1 A A 65 A A 65 1 Y 1 A A 66 A A 66 1 Y 1 A C 67 A C 67 1 Y 1 A U 68 A U 68 1 Y 1 A U 69 A U 69 1 Y 1 A C 70 A C 70 1 Y 1 A A 71 A A 71 1 Y 1 A A 72 A A 72 1 Y 1 A G 73 A G 73 1 Y 1 A A 74 A A 74 1 Y 1 A C 75 A C 75 1 Y 1 A G 76 A G 76 1 Y 1 A G 77 A G 77 1 Y 1 A G 78 A G 78 1 Y 1 A C 79 A C 79 1 Y 1 A A 80 A A 80 1 Y 1 A C 81 A C 81 1 Y 1 A C 82 A C 82 1 Y 1 A G 83 A G 83 1 Y 1 A U 84 A U 84 1 Y 1 A A 85 A A 85 1 Y 1 A A 86 A A 86 1 Y 1 A A 87 A A 87 1 Y 1 A U 88 A U 88 1 Y 1 A G 89 A G 89 1 Y 1 A U 90 A U 90 1 Y 1 A C 91 A C 91 1 Y 1 A C 92 A C 92 1 Y 1 A U 93 A U 93 1 Y 1 A C 94 A C 94 1 Y 1 A G 95 A G 95 1 Y 1 A G 96 A G 96 1 Y 1 A G 97 A G 97 1 Y 1 A C 98 A C 98 1 Y 1 A G 99 A G 99 1 Y 1 A U 100 A U 100 1 Y 1 A C 101 A C 101 1 Y 1 A G 102 A G 102 1 Y 1 A U 103 A U 103 1 Y 1 A C 104 A C 104 1 Y 1 A C 146 A C 146 1 Y 1 A U 147 A U 147 1 Y 1 A G 148 A G 148 1 Y 1 A A 149 A A 149 1 Y 1 B G 34 B G 34 1 Y 1 B A 35 B A 35 1 Y 1 B C 36 B C 36 1 Y 1 B G 37 B G 37 1 Y 1 B A 38 B A 38 1 Y 1 B C 39 B C 39 1 Y 1 B U 40 B U 40 1 Y 1 B C 41 B C 41 1 Y 1 B U 42 B U 42 1 Y 1 B A 43 B A 43 1 Y 1 B U 44 B U 44 1 Y 1 B A 45 B A 45 1 Y 1 B C 46 B C 46 1 Y 1 B C 47 B C 47 1 Y 1 B G 48 B G 48 1 Y 1 B C 49 B C 49 1 Y 1 B G 50 B G 50 1 Y 1 B U 51 B U 51 1 Y 1 B G 52 B G 52 1 Y 1 B G 53 B G 53 1 Y 1 B A 54 B A 54 1 Y 1 B U 55 B U 55 1 Y 1 B A 56 B A 56 1 Y 1 B U 57 B U 57 1 Y 1 B G 58 B G 58 1 Y 1 B G 59 B G 59 1 Y 1 B C 60 B C 60 1 Y 1 B A 61 B A 61 1 Y 1 B C 62 B C 62 1 Y 1 B G 63 B G 63 1 Y 1 B C 64 B C 64 1 Y 1 B A 65 B A 65 1 Y 1 B A 66 B A 66 1 Y 1 B C 67 B C 67 1 Y 1 B U 68 B U 68 1 Y 1 B U 69 B U 69 1 Y 1 B C 70 B C 70 1 Y 1 B A 71 B A 71 1 Y 1 B A 72 B A 72 1 Y 1 B G 73 B G 73 1 Y 1 B A 74 B A 74 1 Y 1 B C 75 B C 75 1 Y 1 B G 76 B G 76 1 Y 1 B G 77 B G 77 1 Y 1 B G 78 B G 78 1 Y 1 B C 79 B C 79 1 Y 1 B A 80 B A 80 1 Y 1 B C 81 B C 81 1 Y 1 B C 82 B C 82 1 Y 1 B G 83 B G 83 1 Y 1 B U 84 B U 84 1 Y 1 B A 85 B A 85 1 Y 1 B A 86 B A 86 1 Y 1 B A 87 B A 87 1 Y 1 B U 88 B U 88 1 Y 1 B G 89 B G 89 1 Y 1 B U 90 B U 90 1 Y 1 B C 91 B C 91 1 Y 1 B C 92 B C 92 1 Y 1 B U 93 B U 93 1 Y 1 B C 94 B C 94 1 Y 1 B G 95 B G 95 1 Y 1 B G 96 B G 96 1 Y 1 B G 97 B G 97 1 Y 1 B C 98 B C 98 1 Y 1 B G 99 B G 99 1 Y 1 B U 100 B U 100 1 Y 1 B C 101 B C 101 1 Y 1 B G 102 B G 102 1 Y 1 B U 103 B U 103 1 Y 1 B C 104 B C 104 1 Y 1 B C 146 B C 146 1 Y 1 B U 147 B U 147 1 Y 1 B G 148 B G 148 1 Y 1 B A 149 B A 149 1 Y N Scaffold attached to quinine-I aptamer (Tonic) local refinement of core 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N metalc 3.443 A G 109 A O3' G 109 1_555 A K 201 C K K 1_555 metalc 3.477 A G 109 A O2' G 109 1_555 A K 201 C K K 1_555 metalc 2.851 A K 201 C K K 1_555 A HOH 364 E O HOH 1_555 metalc 3.460 B G 109 B O3' G 109 1_555 B K 201 D K K 1_555 metalc 3.466 B G 109 B O2' G 109 1_555 B K 201 D K K 1_555 metalc 2.804 B K 201 D K K 1_555 B HOH 364 F O HOH 1_555 hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 A C 141 A N3 C 141 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 A C 141 A O2 C 141 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 A C 141 A N4 C 141 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 A C 140 A N3 C 140 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 A C 140 A O2 C 140 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 A C 140 A N4 C 140 1_555 hydrog WATSON-CRICK A G 3 A N1 G 3 1_555 A C 139 A N3 C 139 1_555 hydrog WATSON-CRICK A G 3 A N2 G 3 1_555 A C 139 A O2 C 139 1_555 hydrog WATSON-CRICK A G 3 A O6 G 3 1_555 A C 139 A N4 C 139 1_555 hydrog WATSON-CRICK A C 4 A N3 C 4 1_555 A G 138 A N1 G 138 1_555 hydrog WATSON-CRICK A C 4 A N4 C 4 1_555 A G 138 A O6 G 138 1_555 hydrog WATSON-CRICK A C 4 A O2 C 4 1_555 A G 138 A N2 G 138 1_555 hydrog WATSON-CRICK A C 5 A N3 C 5 1_555 A G 137 A N1 G 137 1_555 hydrog WATSON-CRICK A C 5 A N4 C 5 1_555 A G 137 A O6 G 137 1_555 hydrog WATSON-CRICK A C 5 A O2 C 5 1_555 A G 137 A N2 G 137 1_555 hydrog WATSON-CRICK A A 6 A N1 A 6 1_555 A U 136 A N3 U 136 1_555 hydrog WATSON-CRICK A A 6 A N6 A 6 1_555 A U 136 A O4 U 136 1_555 hydrog WATSON-CRICK A C 7 A N3 C 7 1_555 A G 135 A N1 G 135 1_555 hydrog WATSON-CRICK A C 7 A N4 C 7 1_555 A G 135 A O6 G 135 1_555 hydrog WATSON-CRICK A C 7 A O2 C 7 1_555 A G 135 A N2 G 135 1_555 hydrog WATSON-CRICK A U 8 A N3 U 8 1_555 A A 134 A N1 A 134 1_555 hydrog WATSON-CRICK A U 8 A O4 U 8 1_555 A A 134 A N6 A 134 1_555 hydrog WATSON-CRICK A G 9 A N1 G 9 1_555 A C 133 A N3 C 133 1_555 hydrog WATSON-CRICK A G 9 A N2 G 9 1_555 A C 133 A O2 C 133 1_555 hydrog WATSON-CRICK A G 9 A O6 G 9 1_555 A C 133 A N4 C 133 1_555 hydrog U-C MISPAIR A U 10 A O4 U 10 1_555 A C 132 A N4 C 132 1_555 hydrog WATSON-CRICK A U 12 A N3 U 12 1_555 A A 131 A N1 A 131 1_555 hydrog WATSON-CRICK A U 12 A O4 U 12 1_555 A A 131 A N6 A 131 1_555 hydrog WATSON-CRICK A C 13 A N3 C 13 1_555 A G 130 A N1 G 130 1_555 hydrog WATSON-CRICK A C 13 A N4 C 13 1_555 A G 130 A O6 G 130 1_555 hydrog WATSON-CRICK A C 13 A O2 C 13 1_555 A G 130 A N2 G 130 1_555 hydrog WATSON-CRICK A A 14 A N1 A 14 1_555 A U 129 A N3 U 129 1_555 hydrog WATSON-CRICK A A 14 A N6 A 14 1_555 A U 129 A O4 U 129 1_555 hydrog WATSON-CRICK A C 15 A N3 C 15 1_555 A G 128 A N1 G 128 1_555 hydrog WATSON-CRICK A C 15 A N4 C 15 1_555 A G 128 A O6 G 128 1_555 hydrog WATSON-CRICK A C 15 A O2 C 15 1_555 A G 128 A N2 G 128 1_555 hydrog WATSON-CRICK A U 16 A N3 U 16 1_555 A A 127 A N1 A 127 1_555 hydrog WATSON-CRICK A U 16 A O4 U 16 1_555 A A 127 A N6 A 127 1_555 hydrog WATSON-CRICK A G 17 A N1 G 17 1_555 A C 157 A N3 C 157 1_555 hydrog WATSON-CRICK A G 17 A N2 G 17 1_555 A C 157 A O2 C 157 1_555 hydrog WATSON-CRICK A G 17 A O6 G 17 1_555 A C 157 A N4 C 157 1_555 hydrog WATSON-CRICK A U 18 A N3 U 18 1_555 A A 156 A N1 A 156 1_555 hydrog WATSON-CRICK A U 18 A O4 U 18 1_555 A A 156 A N6 A 156 1_555 hydrog WATSON-CRICK A U 19 A N3 U 19 1_555 A A 155 A N1 A 155 1_555 hydrog WATSON-CRICK A U 19 A O4 U 19 1_555 A A 155 A N6 A 155 1_555 hydrog WATSON-CRICK A G 20 A N1 G 20 1_555 A C 166 A N3 C 166 1_555 hydrog WATSON-CRICK A G 20 A N2 G 20 1_555 A C 166 A O2 C 166 1_555 hydrog WATSON-CRICK A G 20 A O6 G 20 1_555 A C 166 A N4 C 166 1_555 hydrog WATSON-CRICK A C 21 A N3 C 21 1_555 A G 165 A N1 G 165 1_555 hydrog WATSON-CRICK A C 21 A N4 C 21 1_555 A G 165 A O6 G 165 1_555 hydrog WATSON-CRICK A C 21 A O2 C 21 1_555 A G 165 A N2 G 165 1_555 hydrog WATSON-CRICK A G 22 A N1 G 22 1_555 A C 164 A N3 C 164 1_555 hydrog WATSON-CRICK A G 22 A N2 G 22 1_555 A C 164 A O2 C 164 1_555 hydrog WATSON-CRICK A G 22 A O6 G 22 1_555 A C 164 A N4 C 164 1_555 hydrog WATSON-CRICK A C 23 A N3 C 23 1_555 A G 163 A N1 G 163 1_555 hydrog WATSON-CRICK A C 23 A N4 C 23 1_555 A G 163 A O6 G 163 1_555 hydrog WATSON-CRICK A C 23 A O2 C 23 1_555 A G 163 A N2 G 163 1_555 hydrog WATSON-CRICK A U 24 A N3 U 24 1_555 A A 162 A N1 A 162 1_555 hydrog WATSON-CRICK A U 24 A O4 U 24 1_555 A A 162 A N6 A 162 1_555 hydrog WATSON-CRICK A A 25 A N1 A 25 1_555 A U 161 A N3 U 161 1_555 hydrog WATSON-CRICK A A 25 A N6 A 25 1_555 A U 161 A O4 U 161 1_555 hydrog WATSON-CRICK A C 26 A N3 C 26 1_555 A G 160 A N1 G 160 1_555 hydrog WATSON-CRICK A C 26 A N4 C 26 1_555 A G 160 A O6 G 160 1_555 hydrog WATSON-CRICK A C 26 A O2 C 26 1_555 A G 160 A N2 G 160 1_555 hydrog WATSON-CRICK A A 27 A N1 A 27 1_555 A U 159 A N3 U 159 1_555 hydrog WATSON-CRICK A A 27 A N6 A 27 1_555 A U 159 A O4 U 159 1_555 hydrog TYPE_16_PAIR A U 28 A N3 U 28 1_555 A U 158 A O4 U 158 1_555 hydrog TYPE_16_PAIR A U 28 A O2 U 28 1_555 A U 158 A N3 U 158 1_555 hydrog WATSON-CRICK A C 29 A N3 C 29 1_555 A G 109 A N1 G 109 1_555 hydrog WATSON-CRICK A C 29 A N4 C 29 1_555 A G 109 A O6 G 109 1_555 hydrog WATSON-CRICK A C 29 A O2 C 29 1_555 A G 109 A N2 G 109 1_555 hydrog WATSON-CRICK A U 30 A N3 U 30 1_555 A A 108 A N1 A 108 1_555 hydrog WATSON-CRICK A U 30 A O4 U 30 1_555 A A 108 A N6 A 108 1_555 hydrog WATSON-CRICK A C 31 A N3 C 31 1_555 A G 107 A N1 G 107 1_555 hydrog WATSON-CRICK A C 31 A N4 C 31 1_555 A G 107 A O6 G 107 1_555 hydrog WATSON-CRICK A C 31 A O2 C 31 1_555 A G 107 A N2 G 107 1_555 hydrog WATSON-CRICK A C 32 A N3 C 32 1_555 A G 106 A N1 G 106 1_555 hydrog WATSON-CRICK A C 32 A N4 C 32 1_555 A G 106 A O6 G 106 1_555 hydrog WATSON-CRICK A C 32 A O2 C 32 1_555 A G 106 A N2 G 106 1_555 hydrog WATSON-CRICK A G 33 A N1 G 33 1_555 A C 105 A N3 C 105 1_555 hydrog WATSON-CRICK A G 33 A N2 G 33 1_555 A C 105 A O2 C 105 1_555 hydrog WATSON-CRICK A G 33 A O6 G 33 1_555 A C 105 A N4 C 105 1_555 hydrog WATSON-CRICK A C 111 A N3 C 111 1_555 A G 126 A N1 G 126 1_555 hydrog WATSON-CRICK A C 111 A N4 C 111 1_555 A G 126 A O6 G 126 1_555 hydrog WATSON-CRICK A C 111 A O2 C 111 1_555 A G 126 A N2 G 126 1_555 hydrog WATSON-CRICK A C 112 A N3 C 112 1_555 A G 125 A N1 G 125 1_555 hydrog WATSON-CRICK A C 112 A N4 C 112 1_555 A G 125 A O6 G 125 1_555 hydrog WATSON-CRICK A C 112 A O2 C 112 1_555 A G 125 A N2 G 125 1_555 hydrog WATSON-CRICK A A 113 A N1 A 113 1_555 A U 124 A N3 U 124 1_555 hydrog WATSON-CRICK A A 113 A N6 A 113 1_555 A U 124 A O4 U 124 1_555 hydrog WATSON-CRICK A C 114 A N3 C 114 1_555 A G 123 A N1 G 123 1_555 hydrog WATSON-CRICK A C 114 A N4 C 114 1_555 A G 123 A O6 G 123 1_555 hydrog WATSON-CRICK A C 114 A O2 C 114 1_555 A G 123 A N2 G 123 1_555 hydrog WATSON-CRICK A A 115 A N1 A 115 1_555 A U 122 A N3 U 122 1_555 hydrog WATSON-CRICK A A 115 A N6 A 115 1_555 A U 122 A O4 U 122 1_555 hydrog WATSON-CRICK A C 116 A N3 C 116 1_555 A G 121 A N1 G 121 1_555 hydrog WATSON-CRICK A C 116 A N4 C 116 1_555 A G 121 A O6 G 121 1_555 hydrog WATSON-CRICK A C 116 A O2 C 116 1_555 A G 121 A N2 G 121 1_555 hydrog G-A MISPAIR A G 117 A N2 G 117 1_555 A A 120 A N7 A 120 1_555 hydrog C-U MISPAIR A C 142 A N4 C 142 1_555 B U 153 B O2 U 153 1_555 hydrog TYPE_8_PAIR A A 143 A N1 A 143 1_555 B G 152 B N1 G 152 1_555 hydrog TYPE_8_PAIR A A 143 A N6 A 143 1_555 B G 152 B O6 G 152 1_555 hydrog WATSON-CRICK A C 144 A N3 C 144 1_555 B G 151 B N1 G 151 1_555 hydrog WATSON-CRICK A C 144 A N4 C 144 1_555 B G 151 B O6 G 151 1_555 hydrog WATSON-CRICK A C 144 A O2 C 144 1_555 B G 151 B N2 G 151 1_555 hydrog C-A MISPAIR A C 145 A N3 C 145 1_555 B A 150 B N6 A 150 1_555 hydrog A-C MISPAIR A A 150 A N6 A 150 1_555 B C 145 B N3 C 145 1_555 hydrog WATSON-CRICK A G 151 A N1 G 151 1_555 B C 144 B N3 C 144 1_555 hydrog WATSON-CRICK A G 151 A N2 G 151 1_555 B C 144 B O2 C 144 1_555 hydrog WATSON-CRICK A G 151 A O6 G 151 1_555 B C 144 B N4 C 144 1_555 hydrog TYPE_8_PAIR A G 152 A N1 G 152 1_555 B A 143 B N1 A 143 1_555 hydrog TYPE_8_PAIR A G 152 A O6 G 152 1_555 B A 143 B N6 A 143 1_555 hydrog U-C MISPAIR A U 153 A O2 U 153 1_555 B C 142 B N4 C 142 1_555 hydrog U-A PAIR A U 153 A N3 U 153 1_555 B A 143 B N1 A 143 1_555 hydrog WATSON-CRICK B G 1 B N1 G 1 1_555 B C 141 B N3 C 141 1_555 hydrog WATSON-CRICK B G 1 B N2 G 1 1_555 B C 141 B O2 C 141 1_555 hydrog WATSON-CRICK B G 1 B O6 G 1 1_555 B C 141 B N4 C 141 1_555 hydrog WATSON-CRICK B G 2 B N1 G 2 1_555 B C 140 B N3 C 140 1_555 hydrog WATSON-CRICK B G 2 B N2 G 2 1_555 B C 140 B O2 C 140 1_555 hydrog WATSON-CRICK B G 2 B O6 G 2 1_555 B C 140 B N4 C 140 1_555 hydrog WATSON-CRICK B G 3 B N1 G 3 1_555 B C 139 B N3 C 139 1_555 hydrog WATSON-CRICK B G 3 B N2 G 3 1_555 B C 139 B O2 C 139 1_555 hydrog WATSON-CRICK B G 3 B O6 G 3 1_555 B C 139 B N4 C 139 1_555 hydrog WATSON-CRICK B C 4 B N3 C 4 1_555 B G 138 B N1 G 138 1_555 hydrog WATSON-CRICK B C 4 B N4 C 4 1_555 B G 138 B O6 G 138 1_555 hydrog WATSON-CRICK B C 4 B O2 C 4 1_555 B G 138 B N2 G 138 1_555 hydrog WATSON-CRICK B C 5 B N3 C 5 1_555 B G 137 B N1 G 137 1_555 hydrog WATSON-CRICK B C 5 B N4 C 5 1_555 B G 137 B O6 G 137 1_555 hydrog WATSON-CRICK B C 5 B O2 C 5 1_555 B G 137 B N2 G 137 1_555 hydrog WATSON-CRICK B A 6 B N1 A 6 1_555 B U 136 B N3 U 136 1_555 hydrog WATSON-CRICK B A 6 B N6 A 6 1_555 B U 136 B O4 U 136 1_555 hydrog WATSON-CRICK B C 7 B N3 C 7 1_555 B G 135 B N1 G 135 1_555 hydrog WATSON-CRICK B C 7 B N4 C 7 1_555 B G 135 B O6 G 135 1_555 hydrog WATSON-CRICK B C 7 B O2 C 7 1_555 B G 135 B N2 G 135 1_555 hydrog WATSON-CRICK B U 8 B N3 U 8 1_555 B A 134 B N1 A 134 1_555 hydrog WATSON-CRICK B U 8 B O4 U 8 1_555 B A 134 B N6 A 134 1_555 hydrog WATSON-CRICK B G 9 B N1 G 9 1_555 B C 133 B N3 C 133 1_555 hydrog WATSON-CRICK B G 9 B N2 G 9 1_555 B C 133 B O2 C 133 1_555 hydrog WATSON-CRICK B G 9 B O6 G 9 1_555 B C 133 B N4 C 133 1_555 hydrog U-C MISPAIR B U 10 B O4 U 10 1_555 B C 132 B N4 C 132 1_555 hydrog WATSON-CRICK B U 12 B N3 U 12 1_555 B A 131 B N1 A 131 1_555 hydrog WATSON-CRICK B U 12 B O4 U 12 1_555 B A 131 B N6 A 131 1_555 hydrog WATSON-CRICK B C 13 B N3 C 13 1_555 B G 130 B N1 G 130 1_555 hydrog WATSON-CRICK B C 13 B N4 C 13 1_555 B G 130 B O6 G 130 1_555 hydrog WATSON-CRICK B C 13 B O2 C 13 1_555 B G 130 B N2 G 130 1_555 hydrog WATSON-CRICK B A 14 B N1 A 14 1_555 B U 129 B N3 U 129 1_555 hydrog WATSON-CRICK B A 14 B N6 A 14 1_555 B U 129 B O4 U 129 1_555 hydrog WATSON-CRICK B C 15 B N3 C 15 1_555 B G 128 B N1 G 128 1_555 hydrog WATSON-CRICK B C 15 B N4 C 15 1_555 B G 128 B O6 G 128 1_555 hydrog WATSON-CRICK B C 15 B O2 C 15 1_555 B G 128 B N2 G 128 1_555 hydrog WATSON-CRICK B U 16 B N3 U 16 1_555 B A 127 B N1 A 127 1_555 hydrog WATSON-CRICK B U 16 B O4 U 16 1_555 B A 127 B N6 A 127 1_555 hydrog WATSON-CRICK B G 17 B N1 G 17 1_555 B C 157 B N3 C 157 1_555 hydrog WATSON-CRICK B G 17 B N2 G 17 1_555 B C 157 B O2 C 157 1_555 hydrog WATSON-CRICK B G 17 B O6 G 17 1_555 B C 157 B N4 C 157 1_555 hydrog WATSON-CRICK B U 18 B N3 U 18 1_555 B A 156 B N1 A 156 1_555 hydrog WATSON-CRICK B U 18 B O4 U 18 1_555 B A 156 B N6 A 156 1_555 hydrog WATSON-CRICK B U 19 B N3 U 19 1_555 B A 155 B N1 A 155 1_555 hydrog WATSON-CRICK B U 19 B O4 U 19 1_555 B A 155 B N6 A 155 1_555 hydrog WATSON-CRICK B G 20 B N1 G 20 1_555 B C 166 B N3 C 166 1_555 hydrog WATSON-CRICK B G 20 B N2 G 20 1_555 B C 166 B O2 C 166 1_555 hydrog WATSON-CRICK B G 20 B O6 G 20 1_555 B C 166 B N4 C 166 1_555 hydrog WATSON-CRICK B C 21 B N3 C 21 1_555 B G 165 B N1 G 165 1_555 hydrog WATSON-CRICK B C 21 B N4 C 21 1_555 B G 165 B O6 G 165 1_555 hydrog WATSON-CRICK B C 21 B O2 C 21 1_555 B G 165 B N2 G 165 1_555 hydrog WATSON-CRICK B G 22 B N1 G 22 1_555 B C 164 B N3 C 164 1_555 hydrog WATSON-CRICK B G 22 B N2 G 22 1_555 B C 164 B O2 C 164 1_555 hydrog WATSON-CRICK B G 22 B O6 G 22 1_555 B C 164 B N4 C 164 1_555 hydrog WATSON-CRICK B C 23 B N3 C 23 1_555 B G 163 B N1 G 163 1_555 hydrog WATSON-CRICK B C 23 B N4 C 23 1_555 B G 163 B O6 G 163 1_555 hydrog WATSON-CRICK B C 23 B O2 C 23 1_555 B G 163 B N2 G 163 1_555 hydrog WATSON-CRICK B U 24 B N3 U 24 1_555 B A 162 B N1 A 162 1_555 hydrog WATSON-CRICK B U 24 B O4 U 24 1_555 B A 162 B N6 A 162 1_555 hydrog WATSON-CRICK B A 25 B N1 A 25 1_555 B U 161 B N3 U 161 1_555 hydrog WATSON-CRICK B A 25 B N6 A 25 1_555 B U 161 B O4 U 161 1_555 hydrog WATSON-CRICK B C 26 B N3 C 26 1_555 B G 160 B N1 G 160 1_555 hydrog WATSON-CRICK B C 26 B N4 C 26 1_555 B G 160 B O6 G 160 1_555 hydrog WATSON-CRICK B C 26 B O2 C 26 1_555 B G 160 B N2 G 160 1_555 hydrog WATSON-CRICK B A 27 B N1 A 27 1_555 B U 159 B N3 U 159 1_555 hydrog WATSON-CRICK B A 27 B N6 A 27 1_555 B U 159 B O4 U 159 1_555 hydrog TYPE_16_PAIR B U 28 B N3 U 28 1_555 B U 158 B O4 U 158 1_555 hydrog TYPE_16_PAIR B U 28 B O2 U 28 1_555 B U 158 B N3 U 158 1_555 hydrog WATSON-CRICK B C 29 B N3 C 29 1_555 B G 109 B N1 G 109 1_555 hydrog WATSON-CRICK B C 29 B N4 C 29 1_555 B G 109 B O6 G 109 1_555 hydrog WATSON-CRICK B C 29 B O2 C 29 1_555 B G 109 B N2 G 109 1_555 hydrog WATSON-CRICK B U 30 B N3 U 30 1_555 B A 108 B N1 A 108 1_555 hydrog WATSON-CRICK B U 30 B O4 U 30 1_555 B A 108 B N6 A 108 1_555 hydrog WATSON-CRICK B C 31 B N3 C 31 1_555 B G 107 B N1 G 107 1_555 hydrog WATSON-CRICK B C 31 B N4 C 31 1_555 B G 107 B O6 G 107 1_555 hydrog WATSON-CRICK B C 31 B O2 C 31 1_555 B G 107 B N2 G 107 1_555 hydrog WATSON-CRICK B C 32 B N3 C 32 1_555 B G 106 B N1 G 106 1_555 hydrog WATSON-CRICK B C 32 B N4 C 32 1_555 B G 106 B O6 G 106 1_555 hydrog WATSON-CRICK B C 32 B O2 C 32 1_555 B G 106 B N2 G 106 1_555 hydrog WATSON-CRICK B G 33 B N1 G 33 1_555 B C 105 B N3 C 105 1_555 hydrog WATSON-CRICK B G 33 B N2 G 33 1_555 B C 105 B O2 C 105 1_555 hydrog WATSON-CRICK B G 33 B O6 G 33 1_555 B C 105 B N4 C 105 1_555 hydrog WATSON-CRICK B C 111 B N3 C 111 1_555 B G 126 B N1 G 126 1_555 hydrog WATSON-CRICK B C 111 B N4 C 111 1_555 B G 126 B O6 G 126 1_555 hydrog WATSON-CRICK B C 111 B O2 C 111 1_555 B G 126 B N2 G 126 1_555 hydrog WATSON-CRICK B C 112 B N3 C 112 1_555 B G 125 B N1 G 125 1_555 hydrog WATSON-CRICK B C 112 B N4 C 112 1_555 B G 125 B O6 G 125 1_555 hydrog WATSON-CRICK B C 112 B O2 C 112 1_555 B G 125 B N2 G 125 1_555 hydrog WATSON-CRICK B A 113 B N1 A 113 1_555 B U 124 B N3 U 124 1_555 hydrog WATSON-CRICK B A 113 B N6 A 113 1_555 B U 124 B O4 U 124 1_555 hydrog WATSON-CRICK B C 114 B N3 C 114 1_555 B G 123 B N1 G 123 1_555 hydrog WATSON-CRICK B C 114 B N4 C 114 1_555 B G 123 B O6 G 123 1_555 hydrog WATSON-CRICK B C 114 B O2 C 114 1_555 B G 123 B N2 G 123 1_555 hydrog WATSON-CRICK B A 115 B N1 A 115 1_555 B U 122 B N3 U 122 1_555 hydrog WATSON-CRICK B A 115 B N6 A 115 1_555 B U 122 B O4 U 122 1_555 hydrog WATSON-CRICK B C 116 B N3 C 116 1_555 B G 121 B N1 G 121 1_555 hydrog WATSON-CRICK B C 116 B N4 C 116 1_555 B G 121 B O6 G 121 1_555 hydrog WATSON-CRICK B C 116 B O2 C 116 1_555 B G 121 B N2 G 121 1_555 hydrog G-A MISPAIR B G 117 B N2 G 117 1_555 B A 120 B N7 A 120 1_555 RNA Synthetic, aptamer, engineering, riboswitch, RNA 9NDW PDB 1 1 9NDW 1 166 9NDW 1 166 9NDW A 1 1 166 1 166 9NDW 1 166 9NDW B 1 1 166 1 P 1