1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 0000-0001-6931-1526 Jespersen, N. 0000-0003-2949-6962 Singhal, A. 0000-0002-7129-403X Prajapati, J.D. 0000-0002-7965-7392 Sanbonmatsu, K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 90.00 90.00 90.00 1.00 1.00 1.00 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 R C N 49 N O N 50 R C N 51 N N N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N C N 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N P N 75 N O N 76 N O N 77 N O N 78 N C N 79 R C N 80 N O N 81 S C N 82 N O N 83 R C N 84 N O N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C N 90 N C N 91 N O N 92 N N N 93 N C N 94 N N N 95 N N Y 96 N C N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N MG N 112 N O N 113 N P N 114 N O N 115 N O N 116 N O N 117 N C N 118 R C N 119 N O N 120 S C N 121 N O N 122 R C N 123 N O N 124 R C N 125 N N N 126 N C N 127 N O N 128 N N N 129 N C N 130 N O N 131 N C N 132 N C N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing Y 100 N sing Y 101 N sing Y 102 N doub N 103 N sing Y 104 N sing N 105 N sing Y 106 N doub N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing To Be Published 0353 Vibrio cholerae Glycine Riboswitch - Apo at 3.3A resolution 0000-0001-6931-1526 0000-0003-2949-6962 0000-0002-7129-403X 0000-0002-7965-7392 10.2210/pdb9n3j/pdb pdb_00009n3j 6WLT A 1 A 6WLT PDB experimental model 9N3J 207411 3.27 FSC 0.143 CUT-OFF POINT REL 2025-01-31 RCSB 2026-08-05 2026-08-05 Vibrio cholerae Glycine Riboswitch - Apo at 3.3A resolution 25mM MES (pH 6.0), 10mM MgCl2 6.0 25 mM MES 10 mM MgCl2 Magnesium Chloride 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 1 Apo structure of the glycine riboswitch with 10mM Magnesium 0 NATURAL COMPLEX NO KILODALTONS/NANOMETER 75.7 666 Vibrio cholerae PARTICLE 1 1 SINGLE PARTICLE 59 GATAN K3 BIOQUANTUM (6k x 4k) 5819 300 FIELD EMISSION GUN FLOOD BEAM TFS KRIOS BRIGHT FIELD 2.7 2300 500 FEI TITAN KRIOS AUTOGRID HOLDER 1 850408 15mA GOLD Quantifoil R1.2/1.3 PARTICLE SELECTION 1 cryoSPARC 4.6.0 IMAGE ACQUISITION 1 MASKING CTF CORRECTION 1 cryoSPARC 4.6.0 LAYERLINE INDEXING DIFFRACTION INDEXING MODEL FITTING 1 Coot 0.9.8.95 OTHER MODEL REFINEMENT 1 PHENIX 1.21.1_5286 INITIAL EULER ASSIGNMENT 1 FINAL EULER ASSIGNMENT 1 CLASSIFICATION 1 cryoSPARC 4.6.0 RECONSTRUCTION 1 cryoSPARC 4.6.0 VOLUME SELECTION 1 1 1 SERIES ALIGNMENT 1 1 1 MOLECULAR REPLACEMENT 1 1 1 LATTICE DISTORTION CORRECTION 1 1 1 SYMMETRY DETERMINATION 1 1 1 CRYSTALLOGRAPHY MERGING 1 1 1 1.2 NO NO NO YES 277 ETHANE 9N3J 100 FEI VITROBOT MARK IV 76063.195 Glycine Riboswitch 1 syn polymer 24.305 MAGNESIUM ION 12 syn non-polymer no no GUCCGUUGAAGACUGCAGGAGAGUGGUUGUUAACCAGAUUUUAACAUCUGAGCCAAAUAACCCGCCGAAGAAGUAAAUCU UUCAGGUGCAUUAUUCUUAGCCAUAUAUUGGCAACGAAUAAGCGAGGACUGUAGUUGGAGGAACCUCUGGAGAGAACCGU UUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGCAUAUGCAGAGUGAAACUCUCAGGCAAAAGGACAGAGGAGUGAA GUCCGUUGAAGACUGCAGGAGAGUGGUUGUUAACCAGAUUUUAACAUCUGAGCCAAAUAACCCGCCGAAGAAGUAAAUCU UUCAGGUGCAUUAUUCUUAGCCAUAUAUUGGCAACGAAUAAGCGAGGACUGUAGUUGGAGGAACCUCUGGAGAGAACCGU UUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGCAUAUGCAGAGUGAAACUCUCAGGCAAAAGGACAGAGGAGUGAA A polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1.081 1 19 A 139 A 3 1.222 A_G139:C3_A 1 13.491 0.217 -0.174 -0.123 -4.818 1 19 A 140 A 2 -2.455 A_G140:C2_A 2 -6.928 -0.204 -0.109 -0.359 -14.091 1 20 A 141 A 1 -11.654 A_A141:U1_A 3 9.505 0.409 -0.422 -0.140 41.245 1 A 142 A 229 3.041 A_A142:A229_A 4 -1.431 -2.848 1.036 1.399 20.749 1 19 A 143 A 228 -3.364 A_C143:G228_A 5 -13.286 -0.054 0.188 -0.104 10.131 1 19 A 144 A 227 -2.236 A_C144:G227_A 6 -13.110 0.050 0.127 -0.136 3.845 1 20 A 145 A 226 -2.299 A_U145:A226_A 7 1.860 -0.046 0.731 0.074 12.301 1 19 A 146 A 225 -4.403 A_C146:G225_A 8 -0.828 0.350 0.308 -0.015 -1.010 1 20 A 147 A 224 7.734 A_U147:A224_A 9 7.292 -0.085 0.403 0.085 -6.432 1 19 A 148 A 223 -0.059 A_G148:C223_A 10 -7.527 -0.361 -0.808 -0.007 8.250 A 149 A 222 -25.593 A_G149:A222_A 11 -20.791 7.434 0.440 -5.589 -25.067 A 150 A 221 -20.096 A_A150:G221_A 12 -7.744 -7.141 0.468 -5.110 -4.028 1 A 151 A 220 -36.197 A_G151:G220_A 13 -20.393 -4.341 1.219 1.452 17.520 10 11 A 7 A 138 4.005 A_G7:A138_A 14 5.762 6.802 1.508 -4.341 -31.701 10 11 A 8 A 137 -11.851 A_A8:G137_A 15 -4.553 -6.879 0.051 -5.091 -7.393 5 11 A 9 A 136 2.164 A_A9:G136_A 16 -22.148 -6.505 -1.482 -4.357 2.721 1 28 A 10 A 135 -5.092 A_G10:U135_A 17 -9.393 -1.980 0.135 -0.613 -3.401 1 20 A 11 A 134 -5.903 A_A11:U134_A 18 -7.732 0.169 -0.455 0.008 12.647 1 19 A 12 A 133 0.083 A_C12:G133_A 19 -8.353 0.033 -0.413 -0.080 13.507 1 20 A 13 A 132 4.201 A_U13:A132_A 20 -7.541 0.131 -0.265 0.032 12.618 1 28 A 14 A 131 -3.730 A_G14:U131_A 21 -15.040 -2.448 -0.222 -0.530 18.034 1 19 A 15 A 130 0.684 A_C15:G130_A 22 -18.734 0.158 -0.948 0.129 -21.814 1 20 A 16 A 129 12.702 A_A16:U129_A 23 -13.848 -0.048 -1.336 0.085 -14.621 1 19 A 17 A 128 -2.384 A_G17:C128_A 24 -6.956 -0.232 -0.896 -0.050 8.911 A 18 A 127 -28.773 A_G18:A127_A 25 -13.421 7.544 0.171 -5.367 -23.218 10 A 19 A 126 -22.720 A_A19:G126_A 26 -15.916 -7.299 0.286 -5.242 0.400 1 A 20 A 125 -30.727 A_G20:G125_A 27 -22.647 -4.852 1.072 0.933 -24.048 6 A 43 A 40 -13.406 A_A43:U40_A 28 1.156 -6.358 0.123 -5.053 -7.978 1 18 A 44 A 39 -7.687 A_C44:U39_A 29 5.196 1.723 0.398 -1.512 7.451 1 20 A 45 A 38 -5.229 A_A45:U38_A 30 -24.816 -0.395 0.290 -0.041 2.807 1 20 A 46 A 37 -5.776 A_U46:A37_A 31 -24.777 0.281 0.139 -0.074 -1.995 1 19 A 47 A 36 -3.825 A_C47:G36_A 32 -16.555 0.202 0.346 -0.112 -0.317 1 20 A 48 A 35 -7.423 A_U48:A35_A 33 -14.125 0.411 0.304 -0.218 2.249 1 19 A 49 A 34 -5.216 A_G49:C34_A 34 -11.622 -0.166 0.379 -0.243 24.471 6 A 50 A 33 -9.853 A_A50:C33_A 35 -1.513 -6.710 -0.246 -4.084 24.353 1 8 A 51 A 32 -15.293 A_G51:A32_A 36 -22.880 0.626 -1.369 0.986 -3.991 1 A 53 A 31 9.897 A_C53:A31_A 37 -31.718 1.274 0.611 -0.407 -8.865 1 20 A 55 A 30 -1.718 A_A55:U30_A 38 -8.678 -0.116 -0.325 0.088 -7.861 1 20 A 56 A 29 -5.761 A_A56:U29_A 39 -19.596 -0.250 0.029 -0.012 -5.864 1 28 A 57 A 28 -0.032 A_U57:G28_A 40 -11.212 2.372 0.142 -0.745 2.804 1 20 A 58 A 27 -0.154 A_A58:U27_A 41 1.320 -0.434 0.140 -0.351 22.477 1 20 A 59 A 26 -4.169 A_A59:U26_A 42 -14.154 0.263 0.295 -0.111 13.615 1 19 A 60 A 25 1.101 A_C60:G25_A 43 -6.979 0.533 0.344 -0.100 4.388 1 19 A 61 A 24 2.335 A_C61:G24_A 44 -3.358 0.891 0.411 -0.483 16.754 1 19 A 62 A 22 2.702 A_C62:G22_A 45 -14.616 0.687 -0.028 -0.145 5.550 1 28 A 63 A 86 -0.661 A_G63:U86_A 46 -16.974 -2.187 -0.179 -0.491 15.674 1 19 A 64 A 85 4.256 A_C64:G85_A 47 -28.344 0.091 -0.260 0.172 1.116 1 19 A 65 A 84 -2.510 A_C65:G84_A 48 -12.906 0.272 -0.077 -0.054 -2.981 3 A 66 A 83 109.553 A_G66:A83_A 49 -13.013 2.079 0.363 -6.161 -15.564 1 19 A 69 A 82 -7.906 A_G69:C82_A 50 -2.590 0.236 -0.334 -0.135 18.234 1 20 A 70 A 81 9.220 A_A70:U81_A 51 13.279 -0.003 0.577 -0.024 -10.117 1 20 A 71 A 79 9.438 A_A71:U79_A 52 -19.495 -0.001 -0.547 0.120 -1.468 1 19 A 72 A 78 -4.008 A_G72:C78_A 53 1.507 -0.483 0.075 -0.355 34.145 4 24 A 73 A 76 -65.298 A_U73:A76_A 54 7.893 4.965 0.249 -3.850 22.347 3 23 A 77 A 206 -64.222 A_U77:A206_A 55 -1.976 -1.659 1.040 3.169 6.683 1 19 A 87 A 122 3.603 A_G87:C122_A 56 -2.261 -1.000 0.642 -0.255 3.416 1 19 A 88 A 121 1.814 A_C88:G121_A 57 -2.023 0.251 -0.077 -0.057 -20.825 1 20 A 90 A 120 -2.360 A_U90:A120_A 58 -8.317 -0.443 0.443 -0.128 -3.497 1 20 A 91 A 119 -9.154 A_U91:A119_A 59 -12.959 -0.068 0.348 -0.401 -14.370 1 20 A 92 A 118 1.301 A_A92:U118_A 60 -21.127 0.411 -0.618 -0.182 -14.279 1 20 A 93 A 117 -0.064 A_U93:A117_A 61 -39.535 -0.294 0.456 -0.322 -14.712 1 20 A 94 A 116 -7.087 A_U94:A116_A 62 -26.358 -0.103 0.212 -0.348 1.810 1 19 A 95 A 115 -1.999 A_C95:G115_A 63 -7.691 0.445 0.258 -0.455 -8.283 A 96 A 114 -44.296 A_U96:C114_A 64 -36.459 -1.393 -2.432 -0.025 -10.903 1 20 A 97 A 113 -0.387 A_U97:A113_A 65 -29.752 -0.136 -0.003 -0.243 -11.948 10 A 98 A 112 -4.870 A_A98:A112_A 66 -19.663 6.387 0.557 -4.099 1.378 1 19 A 99 A 111 4.539 A_G99:C111_A 67 -7.125 -0.772 0.202 -0.267 13.898 1 19 A 100 A 110 -2.299 A_C100:G110_A 68 -16.420 0.228 0.085 -0.212 13.502 1 19 A 101 A 109 -0.473 A_C101:G109_A 69 -23.360 0.560 0.100 -0.264 14.073 1 20 A 102 A 108 0.460 A_A102:U108_A 70 -34.637 0.650 0.318 -0.096 20.234 4 24 A 103 A 106 -96.358 A_U103:A106_A 71 -2.292 4.362 0.537 -2.033 -18.853 1 16 A 164 A 159 6.382 A_U164:U159_A 72 -14.531 -3.246 0.604 -2.181 -0.827 1 19 A 165 A 158 -6.486 A_C165:G158_A 73 -18.793 0.684 -0.193 -0.496 3.193 1 19 A 166 A 157 0.892 A_G166:C157_A 74 -4.058 -0.264 0.067 -0.325 4.512 1 19 A 167 A 156 -8.194 A_G167:C156_A 75 6.229 -0.581 0.992 -0.536 -2.080 1 20 A 168 A 155 -13.063 A_U168:A155_A 76 -0.221 -0.306 1.142 0.052 3.637 1 19 A 169 A 153 1.645 A_C169:G153_A 77 1.645 0.805 0.411 -0.274 15.679 1 19 A 170 A 215 4.390 A_G170:C215_A 78 -4.606 -0.578 0.302 0.174 10.245 1 19 A 171 A 214 6.261 A_C171:G214_A 79 -19.244 0.156 -0.200 0.147 5.194 1 19 A 172 A 213 0.034 A_C172:G213_A 80 -18.117 0.084 -0.583 -0.024 4.875 10 A 175 A 212 -18.747 A_A175:A212_A 81 -6.299 -6.542 -0.222 -4.552 -10.352 1 19 A 176 A 211 -6.879 A_G176:C211_A 82 2.497 -0.193 -1.004 -0.084 1.584 1 19 A 177 A 209 -4.461 A_G177:C209_A 83 -13.880 0.157 0.175 0.032 -8.430 1 20 A 178 A 208 6.553 A_A178:U208_A 84 -22.170 -0.061 -0.331 0.184 -5.184 1 19 A 179 A 207 -0.912 A_G179:C207_A 85 -21.311 -0.135 0.257 -0.116 24.228 4 25 A 180 A 205 -87.342 A_C180:A205_A 86 -11.216 3.296 -0.834 -0.114 14.842 10 11 A 182 A 203 -9.597 A_A182:G203_A 87 -18.398 -6.875 1.622 -4.712 20.301 1 28 A 183 A 202 -1.876 A_G183:U202_A 88 -2.796 -2.556 0.666 -0.497 28.534 1 19 A 184 A 201 4.821 A_C184:G201_A 89 -19.453 -0.128 -0.639 0.286 2.907 1 20 A 185 A 200 -5.982 A_U185:A200_A 90 5.656 -0.070 0.325 -0.160 -6.846 1 19 A 186 A 199 1.962 A_C186:G199_A 91 2.325 0.082 0.735 -0.094 -1.215 1 20 A 187 A 198 -1.604 A_U187:A198_A 92 -11.862 -0.080 -0.098 -0.238 -10.590 1 19 A 188 A 197 -3.523 A_G188:C197_A 93 -4.695 0.239 -0.579 -0.249 1.678 1 19 A 189 A 196 -1.885 A_C189:G196_A 94 -18.275 -0.054 0.077 -0.325 9.025 1 28 A 190 A 195 3.059 A_G190:U195_A 95 -1.254 -2.470 -0.179 -0.392 3.020 29.462 A A 139 140 9.440 A A 3 2 3.375 4.778 -0.209 -2.008 AA_G139G140:C2C3_AA 1 -1.668 3.295 29.034 -4.954 0.060 4.002 38.862 A A 140 141 -5.815 A A 2 1 3.818 -3.861 -0.178 -2.078 AA_G140A141:U1C2_AA 2 -2.665 4.014 38.589 -2.559 -0.122 -0.099 41.271 A A 141 142 1.458 A A 1 229 1.922 0.974 3.093 -2.617 AA_A141A142:A229U1_AA 3 -22.853 34.207 34.585 -3.744 -5.142 3.666 44.884 A A 142 143 7.224 A A 229 228 3.872 5.502 -0.447 -1.645 AA_A142C143:G228A229_AA 4 -1.508 1.980 44.539 -2.731 0.428 3.123 36.951 A A 143 144 7.281 A A 228 227 3.397 4.603 -0.153 -2.058 AA_C143C144:G227G228_AA 5 0.391 -0.618 36.671 -3.868 0.294 2.973 30.349 A A 144 145 10.291 A A 227 226 3.369 5.344 -0.186 -1.975 AA_C144U145:A226G227_AA 6 -4.103 7.899 29.609 -4.829 -0.454 2.777 35.480 A A 145 146 4.057 A A 226 225 2.898 2.465 0.123 -1.641 AA_U145C146:G225A226_AA 7 4.135 -6.805 35.162 -3.008 0.326 2.103 32.702 A A 146 147 28.785 A A 225 224 3.417 15.579 0.569 -1.931 AA_C146U147:A224G225_AA 8 -1.044 1.929 28.824 -5.856 -1.173 1.854 35.108 A A 147 148 24.647 A A 224 223 3.077 14.373 -0.878 -1.917 AA_U147G148:C223A224_AA 9 6.232 -10.687 31.518 -4.894 2.200 3.267 66.092 A A 148 149 8.298 A A 223 222 3.317 9.025 -1.941 -0.836 AA_G148G149:A222C223_AA 10 -3.013 2.770 65.480 -1.134 1.657 5.355 -36.704 A A 149 150 -20.076 A A 222 221 5.801 12.381 0.151 0.321 AA_G149A150:G221A222_AA 11 -4.291 -6.958 -34.360 -3.500 -0.796 3.195 50.533 A A 150 151 -6.559 A A 221 220 3.178 -5.586 -1.122 -1.064 AA_A150G151:G220G221_AA 12 3.339 -3.921 50.139 -0.859 1.546 2.232 -16.506 A A 7 8 20.679 A A 138 137 4.195 -5.627 -1.798 -1.677 AA_G7A8:G137A138_AA 13 -6.859 -25.208 -13.933 9.957 -11.281 2.913 33.302 A A 8 9 20.560 A A 137 136 2.896 11.108 -1.080 0.069 AA_A8A9:G136G137_AA 14 -15.409 28.523 27.479 -1.693 -0.631 3.249 62.487 A A 9 10 -2.615 A A 136 135 3.286 -2.664 -0.331 -0.913 AA_A9G10:U135G136_AA 15 -22.220 21.815 58.724 -0.755 -0.730 3.899 35.177 A A 10 11 -6.713 A A 135 134 3.644 -4.048 -1.024 -2.136 AA_G10A11:U134U135_AA 16 -1.534 2.544 34.918 -2.836 1.429 2.618 33.171 A A 11 12 5.373 A A 134 133 2.750 3.063 0.192 -1.325 AA_A11C12:G133U134_AA 17 -0.401 0.704 33.031 -2.743 -0.391 2.496 32.602 A A 12 13 21.537 A A 133 132 3.198 11.820 0.050 -1.389 AA_C12U13:A132G133_AA 18 2.078 -3.786 30.368 -4.332 0.238 1.701 26.194 A A 13 14 34.522 A A 132 131 3.113 14.743 -0.267 -1.611 AA_U13G14:U131A132_AA 19 -1.845 4.320 21.633 -6.785 0.184 2.616 42.797 A A 14 15 16.062 A A 131 130 3.005 11.583 -0.119 -1.072 AA_G14C15:G130U131_AA 20 2.052 -2.846 41.222 -2.484 0.342 2.728 35.660 A A 15 16 41.407 A A 130 129 4.670 23.363 0.677 -1.351 AA_C15A16:U129G130_AA 21 1.239 -2.196 27.103 -6.605 -0.872 2.487 32.851 A A 16 17 25.443 A A 129 128 3.085 13.791 -1.284 -1.315 AA_A16G17:C128U129_AA 22 -8.502 15.685 28.674 -4.485 0.940 2.895 64.163 A A 17 18 8.806 A A 128 127 2.980 9.326 -2.252 -0.983 AA_G17G18:A127C128_AA 23 -2.208 2.085 63.519 -1.287 2.035 5.091 -36.239 A A 18 19 -24.951 A A 127 126 5.847 14.965 0.257 0.452 AA_G18A19:G126A127_AA 24 -7.533 -12.560 -32.250 -4.461 -1.467 3.234 46.079 A A 19 20 -10.517 A A 126 125 3.172 -8.185 -1.104 -1.189 AA_A19G20:G125G126_AA 25 3.684 -4.733 45.243 -0.825 1.724 2.335 60.812 A A 43 44 8.853 A A 40 39 2.498 8.935 -1.605 -0.917 AA_A43C44:U39U40_AA 26 0.738 -0.731 60.210 -1.225 1.612 1.946 30.278 A A 44 45 24.827 A A 39 38 2.483 12.384 0.993 -1.242 AA_C44A45:U38U39_AA 27 9.200 -18.443 26.132 -4.205 -0.544 3.194 39.385 A A 45 46 -4.566 A A 38 37 3.085 -3.074 -0.007 -1.576 AA_A45U46:A37U38_AA 28 -0.057 0.085 39.269 -1.988 0.004 2.600 35.242 A A 46 47 11.311 A A 37 36 2.946 6.808 0.139 -1.566 AA_U46C47:G36A37_AA 29 -0.217 0.360 34.598 -3.451 -0.257 2.618 35.521 A A 47 48 6.863 A A 36 35 2.816 4.177 0.037 -1.566 AA_C47U48:A35G36_AA 30 1.541 -2.532 35.250 -3.076 0.128 1.955 32.649 A A 48 49 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AA_A182G183:U202G203_AA 78 -11.297 12.083 53.159 -2.048 -1.410 2.944 40.126 A A 183 184 3.038 A A 202 201 2.969 2.068 0.528 -1.332 AA_G183C184:G201U202_AA 79 8.762 -12.872 39.143 -2.157 0.145 3.119 37.356 A A 184 185 18.657 A A 201 200 3.955 11.674 -0.350 -2.092 AA_C184U185:A200G201_AA 80 -7.879 12.591 34.687 -4.999 -0.623 2.403 34.109 A A 185 186 18.854 A A 200 199 3.238 10.874 0.290 -2.130 AA_U185C186:G199A200_AA 81 -1.412 2.448 32.348 -5.162 -0.692 2.693 34.064 A A 186 187 8.947 A A 199 198 2.996 5.205 0.063 -1.684 AA_C186U187:A198G199_AA 82 4.786 -8.226 33.344 -3.603 0.561 2.075 38.859 A A 187 188 30.174 A A 198 197 3.255 19.245 -0.160 -1.605 AA_U187G188:C197A198_AA 83 1.496 -2.346 33.888 -4.465 0.401 3.105 28.875 A A 188 189 1.216 A A 197 196 3.127 0.606 -0.217 -1.029 AA_G188C189:G196C197_AA 84 0.004 -0.008 28.869 -2.192 0.436 1.687 25.778 A A 189 190 28.625 A A 196 195 2.798 12.217 0.891 -1.312 AA_C189G190:U195G196_AA 85 -3.962 9.282 22.398 -5.456 -2.812 repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release repository Initial release 1 0 2026-08-05 1 0 2026-08-05 1 0 1 2026-08-05 1 0 2026-08-05 1 0 1 2026-08-05 1 0 2 2026-08-05 1 0 2026-08-05 1 0 1 2026-08-05 1 0 2026-08-05 United States Department of Energy (DOE, United States) 20230044DR kys@lanl.gov 0000-0002-7965-7392 Karissa Sanbonmatsu principal investigator/group leader Vibrio cholerae Glycine Riboswitch - Apo at 3.3A resolution N RCSB Y RCSB 2025-01-31 REL MG MAGNESIUM ION 666 Vibrio cholerae sample 1 235 N N 6WLT PDB experimental model MG 101 2 MG MG 301 A MG 102 2 MG MG 302 A MG 103 2 MG MG 303 A MG 104 2 MG MG 304 A MG 105 2 MG MG 305 A MG 106 2 MG MG 306 A MG 107 2 MG MG 307 A MG 108 2 MG MG 308 A MG 109 2 MG MG 309 A MG 110 2 MG MG 310 A MG 111 2 MG MG 311 A MG 112 2 MG MG 312 A n 1 0 A U 1 n 2 U 1 A C 2 n 3 C 2 A C 3 n 4 C 3 A G 4 n 5 G 4 A U 5 n 6 U 5 A U 6 n 7 U 6 A G 7 n 8 G 7 A A 8 n 9 A 8 A A 9 n 10 A 9 A G 10 n 11 G 10 A A 11 n 12 A 11 A C 12 n 13 C 12 A U 13 n 14 U 13 A G 14 n 15 G 14 A C 15 n 16 C 15 A A 16 n 17 A 16 A G 17 n 18 G 17 A G 18 n 19 G 18 A A 19 n 20 A 19 A G 20 n 21 G 20 A A 21 n 22 A 21 A G 22 n 23 G 22 A U 23 n 24 U 23 A G 24 n 25 G 24 A G 25 n 26 G 25 A U 26 n 27 U 26 A U 27 n 28 U 27 A G 28 n 29 G 28 A U 29 n 30 U 29 A U 30 n 31 U 30 A A 31 n 32 A 31 A A 32 n 33 A 32 A C 33 n 34 C 33 A C 34 n 35 C 34 A A 35 n 36 A 35 A G 36 n 37 G 36 A A 37 n 38 A 37 A U 38 n 39 U 38 A U 39 n 40 U 39 A U 40 n 41 U 40 A U 41 n 42 U 41 A A 42 n 43 A 42 A A 43 n 44 A 43 A C 44 n 45 C 44 A A 45 n 46 A 45 A U 46 n 47 U 46 A C 47 n 48 C 47 A U 48 n 49 U 48 A G 49 n 50 G 49 A A 50 n 51 A 50 A G 51 n 52 G 51 A C 52 n 53 C 52 A C 53 n 54 C 53 A A 54 n 55 A 54 A A 55 n 56 A 55 A A 56 n 57 A 56 A U 57 n 58 U 57 A A 58 n 59 A 58 A A 59 n 60 A 59 A C 60 n 61 C 60 A C 61 n 62 C 61 A C 62 n 63 C 62 A G 63 n 64 G 63 A C 64 n 65 C 64 A C 65 n 66 C 65 A G 66 n 67 G 66 A A 67 n 68 A 67 A A 68 n 69 A 68 A G 69 n 70 G 69 A A 70 n 71 A 70 A A 71 n 72 A 71 A G 72 n 73 G 72 A U 73 n 74 U 73 A A 74 n 75 A 74 A A 75 n 76 A 75 A A 76 n 77 A 76 A U 77 n 78 U 77 A C 78 n 79 C 78 A U 79 n 80 U 79 A U 80 n 81 U 80 A U 81 n 82 U 81 A C 82 n 83 C 82 A A 83 n 84 A 83 A G 84 n 85 G 84 A G 85 n 86 G 85 A U 86 n 87 U 86 A G 87 n 88 G 87 A C 88 n 89 C 88 A A 89 n 90 A 89 A U 90 n 91 U 90 A U 91 n 92 U 91 A A 92 n 93 A 92 A U 93 n 94 U 93 A U 94 n 95 U 94 A C 95 n 96 C 95 A U 96 n 97 U 96 A U 97 n 98 U 97 A A 98 n 99 A 98 A G 99 n 100 G 99 A C 100 n 101 C 100 A C 101 n 102 C 101 A A 102 n 103 A 102 A U 103 n 104 U 103 A A 104 n 105 A 104 A U 105 n 106 U 105 A A 106 n 107 A 106 A U 107 n 108 U 107 A U 108 n 109 U 108 A G 109 n 110 G 109 A G 110 n 111 G 110 A C 111 n 112 C 111 A A 112 n 113 A 112 A A 113 n 114 A 113 A C 114 n 115 C 114 A G 115 n 116 G 115 A A 116 n 117 A 116 A A 117 n 118 A 117 A U 118 n 119 U 118 A A 119 n 120 A 119 A A 120 n 121 A 120 A G 121 n 122 G 121 A C 122 n 123 C 122 A G 123 n 124 G 123 A A 124 n 125 A 124 A G 125 n 126 G 125 A G 126 n 127 G 126 A A 127 n 128 A 127 A C 128 n 129 C 128 A U 129 n 130 U 129 A G 130 n 131 G 130 A U 131 n 132 U 131 A A 132 n 133 A 132 A G 133 n 134 G 133 A U 134 n 135 U 134 A U 135 n 136 U 135 A G 136 n 137 G 136 A G 137 n 138 G 137 A A 138 n 139 A 138 A G 139 n 140 G 139 A G 140 n 141 G 140 A A 141 n 142 A 141 A A 142 n 143 A 142 A C 143 n 144 C 143 A C 144 n 145 C 144 A U 145 n 146 U 145 A C 146 n 147 C 146 A U 147 n 148 U 147 A G 148 n 149 G 148 A G 149 n 150 G 149 A A 150 n 151 A 150 A G 151 n 152 G 151 A A 152 n 153 A 152 A G 153 n 154 G 153 A A 154 n 155 A 154 A A 155 n 156 A 155 A C 156 n 157 C 156 A C 157 n 158 C 157 A G 158 n 159 G 158 A U 159 n 160 U 159 A U 160 n 161 U 160 A U 161 n 162 U 161 A A 162 n 163 A 162 A A 163 n 164 A 163 A U 164 n 165 U 164 A C 165 n 166 C 165 A G 166 n 167 G 166 A G 167 n 168 G 167 A U 168 n 169 U 168 A C 169 n 170 C 169 A G 170 n 171 G 170 A C 171 n 172 C 171 A C 172 n 173 C 172 A G 173 n 174 G 173 A A 174 n 175 A 174 A A 175 n 176 A 175 A G 176 n 177 G 176 A G 177 n 178 G 177 A A 178 n 179 A 178 A G 179 n 180 G 179 A C 180 n 181 C 180 A A 181 n 182 A 181 A A 182 n 183 A 182 A G 183 n 184 G 183 A C 184 n 185 C 184 A U 185 n 186 U 185 A C 186 n 187 C 186 A U 187 n 188 U 187 A G 188 n 189 G 188 A C 189 n 190 C 189 A G 190 n 191 G 190 A C 191 n 192 C 191 A A 192 n 193 A 192 A U 193 n 194 U 193 A A 194 n 195 A 194 A U 195 n 196 U 195 A G 196 n 197 G 196 A C 197 n 198 C 197 A A 198 n 199 A 198 A G 199 n 200 G 199 A A 200 n 201 A 200 A G 201 n 202 G 201 A U 202 n 203 U 202 A G 203 n 204 G 203 A A 204 n 205 A 204 A A 205 n 206 A 205 A A 206 n 207 A 206 A C 207 n 208 C 207 A U 208 n 209 U 208 A C 209 n 210 C 209 A U 210 n 211 U 210 A C 211 n 212 C 211 A A 212 n 213 A 212 A G 213 n 214 G 213 A G 214 n 215 G 214 A C 215 n 216 C 215 A A 216 n 217 A 216 A A 217 n 218 A 217 A A 218 n 219 A 218 A A 219 n 220 A 219 A G 220 n 221 G 220 A G 221 n 222 G 221 A A 222 n 223 A 222 A C 223 n 224 C 223 A A 224 n 225 A 224 A G 225 n 226 G 225 A A 226 n 227 A 226 A G 227 n 228 G 227 A G 228 n 229 G 228 A A 229 n 230 A 229 A G 230 n 231 G 230 A n 232 231 A n 233 232 A n 234 233 A n 235 234 A author_and_software_defined_assembly 1 monomeric not applicable electron microscopy A A 68 A OP1 A 69 1_555 A MG 308 I MG MG 1_555 A G 69 A OP2 G 70 1_555 104.6 A C 211 A OP2 C 212 1_555 A MG 305 F MG MG 1_555 A A 212 A OP2 A 213 1_555 112.0 1.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 1.0 1_555 x,y,z identity operation 0.0 0.0 0.0 1 A G 0 A G 1 1 Y 1 A U 231 A U 232 1 Y 1 A G 232 A G 233 1 Y 1 A A 233 A A 234 1 Y 1 A A 234 A A 235 1 Y 3.27 REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS) 0.006 5523 0.512 8610 22.518 3309 0.031 1150 0.003 230 N Vibrio cholerae Glycine Riboswitch - Apo at 3.3A resolution 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N metalc 2.603 A G 18 A O6 G 19 1_555 A MG 307 H MG MG 1_555 metalc 1.914 A A 68 A OP1 A 69 1_555 A MG 308 I MG MG 1_555 metalc 2.387 A G 69 A OP2 G 70 1_555 A MG 308 I MG MG 1_555 metalc 1.951 A U 73 A O4 U 74 1_555 A MG 302 C MG MG 1_555 metalc 2.932 A U 73 A OP2 U 74 1_555 A MG 309 J MG MG 1_555 metalc 2.557 A A 175 A OP1 A 176 1_555 A MG 311 L MG MG 1_555 metalc 1.905 A C 211 A OP2 C 212 1_555 A MG 305 F MG MG 1_555 metalc 1.897 A A 212 A OP2 A 213 1_555 A MG 305 F MG MG 1_555 metalc 2.195 A A 219 A OP2 A 220 1_555 A MG 306 G MG MG 1_555 hydrog WATSON-CRICK A U 1 A N3 U 2 1_555 A A 141 A N1 A 142 1_555 hydrog WATSON-CRICK A U 1 A O4 U 2 1_555 A A 141 A N6 A 142 1_555 hydrog U-G MISPAIR A U 1 A O4 U 2 1_555 A G 230 A N2 G 231 1_555 hydrog WATSON-CRICK A C 2 A N3 C 3 1_555 A G 140 A N1 G 141 1_555 hydrog WATSON-CRICK A C 2 A N4 C 3 1_555 A G 140 A O6 G 141 1_555 hydrog WATSON-CRICK A C 2 A O2 C 3 1_555 A G 140 A N2 G 141 1_555 hydrog WATSON-CRICK A C 3 A N3 C 4 1_555 A G 139 A N1 G 140 1_555 hydrog WATSON-CRICK A C 3 A N4 C 4 1_555 A G 139 A O6 G 140 1_555 hydrog WATSON-CRICK A C 3 A O2 C 4 1_555 A G 139 A N2 G 140 1_555 hydrog TYPE_11_PAIR A G 7 A N2 G 8 1_555 A A 138 A N7 A 139 1_555 hydrog TYPE_11_PAIR A G 7 A N3 G 8 1_555 A A 138 A N6 A 139 1_555 hydrog TYPE_11_PAIR A A 8 A N6 A 9 1_555 A G 137 A N3 G 138 1_555 hydrog TYPE_11_PAIR A A 8 A N7 A 9 1_555 A G 137 A N2 G 138 1_555 hydrog TYPE_11_PAIR A A 9 A N6 A 10 1_555 A G 136 A N3 G 137 1_555 hydrog TYPE_11_PAIR A A 9 A N7 A 10 1_555 A G 136 A N2 G 137 1_555 hydrog TYPE_28_PAIR A G 10 A N1 G 11 1_555 A U 135 A O2 U 136 1_555 hydrog TYPE_28_PAIR A G 10 A O6 G 11 1_555 A U 135 A N3 U 136 1_555 hydrog WATSON-CRICK A A 11 A N1 A 12 1_555 A U 134 A N3 U 135 1_555 hydrog WATSON-CRICK A A 11 A N6 A 12 1_555 A U 134 A O4 U 135 1_555 hydrog WATSON-CRICK A C 12 A N3 C 13 1_555 A G 133 A N1 G 134 1_555 hydrog WATSON-CRICK A C 12 A N4 C 13 1_555 A G 133 A O6 G 134 1_555 hydrog WATSON-CRICK A C 12 A O2 C 13 1_555 A G 133 A N2 G 134 1_555 hydrog WATSON-CRICK A U 13 A N3 U 14 1_555 A A 132 A N1 A 133 1_555 hydrog WATSON-CRICK A U 13 A O4 U 14 1_555 A A 132 A N6 A 133 1_555 hydrog TYPE_28_PAIR A G 14 A N1 G 15 1_555 A U 131 A O2 U 132 1_555 hydrog TYPE_28_PAIR A G 14 A O6 G 15 1_555 A U 131 A N3 U 132 1_555 hydrog WATSON-CRICK A C 15 A N3 C 16 1_555 A G 130 A N1 G 131 1_555 hydrog WATSON-CRICK A C 15 A N4 C 16 1_555 A G 130 A O6 G 131 1_555 hydrog WATSON-CRICK A C 15 A O2 C 16 1_555 A G 130 A N2 G 131 1_555 hydrog WATSON-CRICK A A 16 A N1 A 17 1_555 A U 129 A N3 U 130 1_555 hydrog WATSON-CRICK A A 16 A N6 A 17 1_555 A U 129 A O4 U 130 1_555 hydrog WATSON-CRICK A G 17 A N1 G 18 1_555 A C 128 A N3 C 129 1_555 hydrog WATSON-CRICK A G 17 A N2 G 18 1_555 A C 128 A O2 C 129 1_555 hydrog WATSON-CRICK A G 17 A O6 G 18 1_555 A C 128 A N4 C 129 1_555 hydrog TYPE_28_PAIR A G 17 A N1 G 18 1_555 A U 129 A O2 U 130 1_555 hydrog TYPE_28_PAIR A G 17 A O6 G 18 1_555 A U 129 A N3 U 130 1_555 hydrog G-A MISPAIR A G 18 A N2 G 19 1_555 A A 127 A N7 A 128 1_555 hydrog G-C PAIR A G 18 A N2 G 19 1_555 A C 128 A N3 C 129 1_555 hydrog A-G MISPAIR A A 19 A N7 A 20 1_555 A G 126 A N2 G 127 1_555 hydrog G-G MISPAIR A G 20 A O6 G 21 1_555 A G 125 A N2 G 126 1_555 hydrog A-G MISPAIR A A 21 A N3 A 22 1_555 A G 85 A N2 G 86 1_555 hydrog WATSON-CRICK A G 22 A N1 G 23 1_555 A C 62 A N3 C 63 1_555 hydrog WATSON-CRICK A G 22 A N2 G 23 1_555 A C 62 A O2 C 63 1_555 hydrog WATSON-CRICK A G 22 A O6 G 23 1_555 A C 62 A N4 C 63 1_555 hydrog WATSON-CRICK A G 24 A N1 G 25 1_555 A C 61 A N3 C 62 1_555 hydrog WATSON-CRICK A G 24 A N2 G 25 1_555 A C 61 A O2 C 62 1_555 hydrog WATSON-CRICK A G 24 A O6 G 25 1_555 A C 61 A N4 C 62 1_555 hydrog WATSON-CRICK A G 25 A N1 G 26 1_555 A C 60 A N3 C 61 1_555 hydrog WATSON-CRICK A G 25 A N2 G 26 1_555 A C 60 A O2 C 61 1_555 hydrog WATSON-CRICK A G 25 A O6 G 26 1_555 A C 60 A N4 C 61 1_555 hydrog WATSON-CRICK A U 26 A N3 U 27 1_555 A A 59 A N1 A 60 1_555 hydrog WATSON-CRICK A U 26 A O4 U 27 1_555 A A 59 A N6 A 60 1_555 hydrog WATSON-CRICK A U 27 A N3 U 28 1_555 A A 58 A N1 A 59 1_555 hydrog WATSON-CRICK A U 27 A O4 U 28 1_555 A A 58 A N6 A 59 1_555 hydrog TYPE_28_PAIR A G 28 A N1 G 29 1_555 A U 57 A O2 U 58 1_555 hydrog TYPE_28_PAIR A G 28 A O6 G 29 1_555 A U 57 A N3 U 58 1_555 hydrog WATSON-CRICK A U 29 A N3 U 30 1_555 A A 56 A N1 A 57 1_555 hydrog WATSON-CRICK A U 29 A O4 U 30 1_555 A A 56 A N6 A 57 1_555 hydrog WATSON-CRICK A U 30 A N3 U 31 1_555 A A 55 A N1 A 56 1_555 hydrog WATSON-CRICK A U 30 A O4 U 31 1_555 A A 55 A N6 A 56 1_555 hydrog A-C MISPAIR A A 31 A N6 A 32 1_555 A C 53 A N3 C 54 1_555 hydrog A-A MISPAIR A A 31 A N3 A 32 1_555 A A 54 A N6 A 55 1_555 hydrog TYPE_8_PAIR A A 32 A N1 A 33 1_555 A G 51 A N1 G 52 1_555 hydrog TYPE_8_PAIR A A 32 A N6 A 33 1_555 A G 51 A O6 G 52 1_555 hydrog C-A MISPAIR A C 33 A O2 C 34 1_555 A A 50 A N6 A 51 1_555 hydrog C-G PAIR A C 33 A O2 C 34 1_555 A G 51 A N1 G 52 1_555 hydrog WATSON-CRICK A C 34 A N3 C 35 1_555 A G 49 A N1 G 50 1_555 hydrog WATSON-CRICK A C 34 A N4 C 35 1_555 A G 49 A O6 G 50 1_555 hydrog WATSON-CRICK A C 34 A O2 C 35 1_555 A G 49 A N2 G 50 1_555 hydrog WATSON-CRICK A A 35 A N1 A 36 1_555 A U 48 A N3 U 49 1_555 hydrog WATSON-CRICK A A 35 A N6 A 36 1_555 A U 48 A O4 U 49 1_555 hydrog WATSON-CRICK A G 36 A N1 G 37 1_555 A C 47 A N3 C 48 1_555 hydrog WATSON-CRICK A G 36 A N2 G 37 1_555 A C 47 A O2 C 48 1_555 hydrog WATSON-CRICK A G 36 A O6 G 37 1_555 A C 47 A N4 C 48 1_555 hydrog WATSON-CRICK A A 37 A N1 A 38 1_555 A U 46 A N3 U 47 1_555 hydrog WATSON-CRICK A A 37 A N6 A 38 1_555 A U 46 A O4 U 47 1_555 hydrog WATSON-CRICK A U 38 A N3 U 39 1_555 A A 45 A N1 A 46 1_555 hydrog WATSON-CRICK A U 38 A O4 U 39 1_555 A A 45 A N6 A 46 1_555 hydrog TYPE_18_PAIR A U 39 A N3 U 40 1_555 A C 44 A N3 C 45 1_555 hydrog TYPE_18_PAIR A U 39 A O4 U 40 1_555 A C 44 A N4 C 45 1_555 hydrog U-A PAIR A U 40 A O2 U 41 1_555 A A 43 A N6 A 44 1_555 hydrog TYPE_28_PAIR A G 63 A N1 G 64 1_555 A U 86 A O2 U 87 1_555 hydrog TYPE_28_PAIR A G 63 A O6 G 64 1_555 A U 86 A N3 U 87 1_555 hydrog WATSON-CRICK A C 64 A N3 C 65 1_555 A G 85 A N1 G 86 1_555 hydrog WATSON-CRICK A C 64 A N4 C 65 1_555 A G 85 A O6 G 86 1_555 hydrog WATSON-CRICK A C 64 A O2 C 65 1_555 A G 85 A N2 G 86 1_555 hydrog WATSON-CRICK A C 65 A N3 C 66 1_555 A G 84 A N1 G 85 1_555 hydrog WATSON-CRICK A C 65 A N4 C 66 1_555 A G 84 A O6 G 85 1_555 hydrog WATSON-CRICK A C 65 A O2 C 66 1_555 A G 84 A N2 G 85 1_555 hydrog G-A MISPAIR A G 66 A N7 G 67 1_555 A A 83 A N6 A 84 1_555 hydrog A-A MISPAIR A A 68 A N6 A 69 1_555 A A 83 A N3 A 84 1_555 hydrog WATSON-CRICK A G 69 A N1 G 70 1_555 A C 82 A N3 C 83 1_555 hydrog WATSON-CRICK A G 69 A N2 G 70 1_555 A C 82 A O2 C 83 1_555 hydrog WATSON-CRICK A G 69 A O6 G 70 1_555 A C 82 A N4 C 83 1_555 hydrog WATSON-CRICK A A 70 A N1 A 71 1_555 A U 81 A N3 U 82 1_555 hydrog WATSON-CRICK A A 70 A N6 A 71 1_555 A U 81 A O4 U 82 1_555 hydrog WATSON-CRICK A A 71 A N1 A 72 1_555 A U 79 A N3 U 80 1_555 hydrog WATSON-CRICK A A 71 A N6 A 72 1_555 A U 79 A O4 U 80 1_555 hydrog WATSON-CRICK A G 72 A N1 G 73 1_555 A C 78 A N3 C 79 1_555 hydrog WATSON-CRICK A G 72 A N2 G 73 1_555 A C 78 A O2 C 79 1_555 hydrog WATSON-CRICK A G 72 A O6 G 73 1_555 A C 78 A N4 C 79 1_555 hydrog REVERSED HOOGSTEEN A U 73 A N3 U 74 1_555 A A 76 A N7 A 77 1_555 hydrog REVERSED HOOGSTEEN A U 73 A O2 U 74 1_555 A A 76 A N6 A 77 1_555 hydrog HOOGSTEEN A U 77 A N3 U 78 1_555 A A 206 A N7 A 207 1_555 hydrog HOOGSTEEN A U 77 A O4 U 78 1_555 A A 206 A N6 A 207 1_555 hydrog U-C MISPAIR A U 80 A O2 U 81 1_555 A C 82 A N4 C 83 1_555 hydrog WATSON-CRICK A G 87 A N1 G 88 1_555 A C 122 A N3 C 123 1_555 hydrog WATSON-CRICK A G 87 A N2 G 88 1_555 A C 122 A O2 C 123 1_555 hydrog WATSON-CRICK A G 87 A O6 G 88 1_555 A C 122 A N4 C 123 1_555 hydrog WATSON-CRICK A C 88 A N3 C 89 1_555 A G 121 A N1 G 122 1_555 hydrog WATSON-CRICK A C 88 A N4 C 89 1_555 A G 121 A O6 G 122 1_555 hydrog WATSON-CRICK A C 88 A O2 C 89 1_555 A G 121 A N2 G 122 1_555 hydrog WATSON-CRICK A U 90 A N3 U 91 1_555 A A 120 A N1 A 121 1_555 hydrog WATSON-CRICK A U 90 A O4 U 91 1_555 A A 120 A N6 A 121 1_555 hydrog WATSON-CRICK A U 91 A N3 U 92 1_555 A A 119 A N1 A 120 1_555 hydrog WATSON-CRICK A U 91 A O4 U 92 1_555 A A 119 A N6 A 120 1_555 hydrog WATSON-CRICK A A 92 A N1 A 93 1_555 A U 118 A N3 U 119 1_555 hydrog WATSON-CRICK A A 92 A N6 A 93 1_555 A U 118 A O4 U 119 1_555 hydrog WATSON-CRICK A U 93 A N3 U 94 1_555 A A 117 A N1 A 118 1_555 hydrog WATSON-CRICK A U 93 A O4 U 94 1_555 A A 117 A N6 A 118 1_555 hydrog WATSON-CRICK A U 94 A N3 U 95 1_555 A A 116 A N1 A 117 1_555 hydrog WATSON-CRICK A U 94 A O4 U 95 1_555 A A 116 A N6 A 117 1_555 hydrog WATSON-CRICK A C 95 A N3 C 96 1_555 A G 115 A N1 G 116 1_555 hydrog WATSON-CRICK A C 95 A N4 C 96 1_555 A G 115 A O6 G 116 1_555 hydrog WATSON-CRICK A C 95 A O2 C 96 1_555 A G 115 A N2 G 116 1_555 hydrog U-C MISPAIR A U 96 A O4 U 97 1_555 A C 114 A N4 C 115 1_555 hydrog WATSON-CRICK A U 97 A N3 U 98 1_555 A A 113 A N1 A 114 1_555 hydrog WATSON-CRICK A U 97 A O4 U 98 1_555 A A 113 A N6 A 114 1_555 hydrog A-A MISPAIR A A 98 A N3 A 99 1_555 A A 112 A N6 A 113 1_555 hydrog WATSON-CRICK A G 99 A N1 G 100 1_555 A C 111 A N3 C 112 1_555 hydrog WATSON-CRICK A G 99 A N2 G 100 1_555 A C 111 A O2 C 112 1_555 hydrog WATSON-CRICK A G 99 A O6 G 100 1_555 A C 111 A N4 C 112 1_555 hydrog WATSON-CRICK A C 100 A N3 C 101 1_555 A G 110 A N1 G 111 1_555 hydrog WATSON-CRICK A C 100 A N4 C 101 1_555 A G 110 A O6 G 111 1_555 hydrog WATSON-CRICK A C 100 A O2 C 101 1_555 A G 110 A N2 G 111 1_555 hydrog WATSON-CRICK A C 101 A N3 C 102 1_555 A G 109 A N1 G 110 1_555 hydrog WATSON-CRICK A C 101 A N4 C 102 1_555 A G 109 A O6 G 110 1_555 hydrog WATSON-CRICK A C 101 A O2 C 102 1_555 A G 109 A N2 G 110 1_555 hydrog WATSON-CRICK A A 102 A N1 A 103 1_555 A U 108 A N3 U 109 1_555 hydrog WATSON-CRICK A A 102 A N6 A 103 1_555 A U 108 A O4 U 109 1_555 hydrog REVERSED HOOGSTEEN A U 103 A N3 U 104 1_555 A A 106 A N7 A 107 1_555 hydrog REVERSED HOOGSTEEN A U 103 A O2 U 104 1_555 A A 106 A N6 A 107 1_555 hydrog G-A MISPAIR A G 130 A N2 G 131 1_555 A A 182 A N3 A 183 1_555 hydrog A-A MISPAIR A A 142 A N6 A 143 1_555 A A 229 A N1 A 230 1_555 hydrog WATSON-CRICK A C 143 A N3 C 144 1_555 A G 228 A N1 G 229 1_555 hydrog WATSON-CRICK A C 143 A N4 C 144 1_555 A G 228 A O6 G 229 1_555 hydrog WATSON-CRICK A C 143 A O2 C 144 1_555 A G 228 A N2 G 229 1_555 hydrog WATSON-CRICK A C 144 A N3 C 145 1_555 A G 227 A N1 G 228 1_555 hydrog WATSON-CRICK A C 144 A N4 C 145 1_555 A G 227 A O6 G 228 1_555 hydrog WATSON-CRICK A C 144 A O2 C 145 1_555 A G 227 A N2 G 228 1_555 hydrog WATSON-CRICK A U 145 A N3 U 146 1_555 A A 226 A N1 A 227 1_555 hydrog WATSON-CRICK A U 145 A O4 U 146 1_555 A A 226 A N6 A 227 1_555 hydrog WATSON-CRICK A C 146 A N3 C 147 1_555 A G 225 A N1 G 226 1_555 hydrog WATSON-CRICK A C 146 A N4 C 147 1_555 A G 225 A O6 G 226 1_555 hydrog WATSON-CRICK A C 146 A O2 C 147 1_555 A G 225 A N2 G 226 1_555 hydrog WATSON-CRICK A U 147 A N3 U 148 1_555 A A 224 A N1 A 225 1_555 hydrog WATSON-CRICK A U 147 A O4 U 148 1_555 A A 224 A N6 A 225 1_555 hydrog WATSON-CRICK A G 148 A N1 G 149 1_555 A C 223 A N3 C 224 1_555 hydrog WATSON-CRICK A G 148 A N2 G 149 1_555 A C 223 A O2 C 224 1_555 hydrog WATSON-CRICK A G 148 A O6 G 149 1_555 A C 223 A N4 C 224 1_555 hydrog G-A MISPAIR A G 149 A N2 G 150 1_555 A A 222 A N7 A 223 1_555 hydrog A-G MISPAIR A A 150 A N7 A 151 1_555 A G 221 A N2 G 222 1_555 hydrog G-G MISPAIR A G 151 A O6 G 152 1_555 A G 220 A N2 G 221 1_555 hydrog A-G MISPAIR A A 152 A N3 A 153 1_555 A G 214 A N2 G 215 1_555 hydrog WATSON-CRICK A G 153 A N1 G 154 1_555 A C 169 A N3 C 170 1_555 hydrog WATSON-CRICK A G 153 A N2 G 154 1_555 A C 169 A O2 C 170 1_555 hydrog WATSON-CRICK A G 153 A O6 G 154 1_555 A C 169 A N4 C 170 1_555 hydrog WATSON-CRICK A A 155 A N1 A 156 1_555 A U 168 A N3 U 169 1_555 hydrog WATSON-CRICK A A 155 A N6 A 156 1_555 A U 168 A O4 U 169 1_555 hydrog WATSON-CRICK A C 156 A N3 C 157 1_555 A G 167 A N1 G 168 1_555 hydrog WATSON-CRICK A C 156 A N4 C 157 1_555 A G 167 A O6 G 168 1_555 hydrog WATSON-CRICK A C 156 A O2 C 157 1_555 A G 167 A N2 G 168 1_555 hydrog WATSON-CRICK A C 157 A N3 C 158 1_555 A G 166 A N1 G 167 1_555 hydrog WATSON-CRICK A C 157 A N4 C 158 1_555 A G 166 A O6 G 167 1_555 hydrog WATSON-CRICK A C 157 A O2 C 158 1_555 A G 166 A N2 G 167 1_555 hydrog WATSON-CRICK A G 158 A N1 G 159 1_555 A C 165 A N3 C 166 1_555 hydrog WATSON-CRICK A G 158 A N2 G 159 1_555 A C 165 A O2 C 166 1_555 hydrog WATSON-CRICK A G 158 A O6 G 159 1_555 A C 165 A N4 C 166 1_555 hydrog TYPE_16_PAIR A U 159 A N3 U 160 1_555 A U 164 A O4 U 165 1_555 hydrog TYPE_16_PAIR A U 159 A O2 U 160 1_555 A U 164 A N3 U 165 1_555 hydrog WATSON-CRICK A G 170 A N1 G 171 1_555 A C 215 A N3 C 216 1_555 hydrog WATSON-CRICK A G 170 A N2 G 171 1_555 A C 215 A O2 C 216 1_555 hydrog WATSON-CRICK A G 170 A O6 G 171 1_555 A C 215 A N4 C 216 1_555 hydrog WATSON-CRICK A C 171 A N3 C 172 1_555 A G 214 A N1 G 215 1_555 hydrog WATSON-CRICK A C 171 A N4 C 172 1_555 A G 214 A O6 G 215 1_555 hydrog WATSON-CRICK A C 171 A O2 C 172 1_555 A G 214 A N2 G 215 1_555 hydrog WATSON-CRICK A C 172 A N3 C 173 1_555 A G 213 A N1 G 214 1_555 hydrog WATSON-CRICK A C 172 A N4 C 173 1_555 A G 213 A O6 G 214 1_555 hydrog WATSON-CRICK A C 172 A O2 C 173 1_555 A G 213 A N2 G 214 1_555 hydrog G-A MISPAIR A G 173 A N7 G 174 1_555 A A 212 A N6 A 213 1_555 hydrog A-A MISPAIR A A 175 A N6 A 176 1_555 A A 212 A N3 A 213 1_555 hydrog WATSON-CRICK A G 176 A N1 G 177 1_555 A C 211 A N3 C 212 1_555 hydrog WATSON-CRICK A G 176 A N2 G 177 1_555 A C 211 A O2 C 212 1_555 hydrog WATSON-CRICK A G 176 A O6 G 177 1_555 A C 211 A N4 C 212 1_555 hydrog WATSON-CRICK A G 177 A N1 G 178 1_555 A C 209 A N3 C 210 1_555 hydrog WATSON-CRICK A G 177 A N2 G 178 1_555 A C 209 A O2 C 210 1_555 hydrog WATSON-CRICK A G 177 A O6 G 178 1_555 A C 209 A N4 C 210 1_555 hydrog WATSON-CRICK A A 178 A N1 A 179 1_555 A U 208 A N3 U 209 1_555 hydrog WATSON-CRICK A A 178 A N6 A 179 1_555 A U 208 A O4 U 209 1_555 hydrog WATSON-CRICK A G 179 A N1 G 180 1_555 A C 207 A N3 C 208 1_555 hydrog WATSON-CRICK A G 179 A N2 G 180 1_555 A C 207 A O2 C 208 1_555 hydrog WATSON-CRICK A G 179 A O6 G 180 1_555 A C 207 A N4 C 208 1_555 hydrog TYPE_25_PAIR A C 180 A N3 C 181 1_555 A A 205 A N6 A 206 1_555 hydrog TYPE_25_PAIR A C 180 A N4 C 181 1_555 A A 205 A N7 A 206 1_555 hydrog A-G MISPAIR A A 181 A N7 A 182 1_555 A G 203 A N2 G 204 1_555 hydrog TYPE_11_PAIR A A 182 A N6 A 183 1_555 A G 203 A N3 G 204 1_555 hydrog TYPE_11_PAIR A A 182 A N7 A 183 1_555 A G 203 A N2 G 204 1_555 hydrog TYPE_28_PAIR A G 183 A N1 G 184 1_555 A U 202 A O2 U 203 1_555 hydrog TYPE_28_PAIR A G 183 A O6 G 184 1_555 A U 202 A N3 U 203 1_555 hydrog WATSON-CRICK A C 184 A N3 C 185 1_555 A G 201 A N1 G 202 1_555 hydrog WATSON-CRICK A C 184 A N4 C 185 1_555 A G 201 A O6 G 202 1_555 hydrog WATSON-CRICK A C 184 A O2 C 185 1_555 A G 201 A N2 G 202 1_555 hydrog WATSON-CRICK A U 185 A N3 U 186 1_555 A A 200 A N1 A 201 1_555 hydrog WATSON-CRICK A U 185 A O4 U 186 1_555 A A 200 A N6 A 201 1_555 hydrog WATSON-CRICK A C 186 A N3 C 187 1_555 A G 199 A N1 G 200 1_555 hydrog WATSON-CRICK A C 186 A N4 C 187 1_555 A G 199 A O6 G 200 1_555 hydrog WATSON-CRICK A C 186 A O2 C 187 1_555 A G 199 A N2 G 200 1_555 hydrog WATSON-CRICK A U 187 A N3 U 188 1_555 A A 198 A N1 A 199 1_555 hydrog WATSON-CRICK A U 187 A O4 U 188 1_555 A A 198 A N6 A 199 1_555 hydrog WATSON-CRICK A G 188 A N1 G 189 1_555 A C 197 A N3 C 198 1_555 hydrog WATSON-CRICK A G 188 A N2 G 189 1_555 A C 197 A O2 C 198 1_555 hydrog WATSON-CRICK A G 188 A O6 G 189 1_555 A C 197 A N4 C 198 1_555 hydrog WATSON-CRICK A C 189 A N3 C 190 1_555 A G 196 A N1 G 197 1_555 hydrog WATSON-CRICK A C 189 A N4 C 190 1_555 A G 196 A O6 G 197 1_555 hydrog WATSON-CRICK A C 189 A O2 C 190 1_555 A G 196 A N2 G 197 1_555 hydrog TYPE_28_PAIR A G 190 A N1 G 191 1_555 A U 195 A O2 U 196 1_555 hydrog TYPE_28_PAIR A G 190 A O6 G 191 1_555 A U 195 A N3 U 196 1_555 hydrog C-C MISPAIR A C 209 A N3 C 210 1_555 A C 211 A N4 C 212 1_555 RNA Riboswitch, Apo, RNA CP160480.1 GB 1 1842282 2772158317 UCCGUUGAAGACUGCAGGAGAGUGGUUGUUAACCAGAUUUUAACAUCUGAGCCAAAUAACCCGCCGAAGAAGUAAAUCUU UCAGGUGCAUUAUUCUUAGCCAUAUAUUGGCAACGAAUAAGCGAGGACUGUAGUUGGAGGAACCUCUGGAGAGAACCGUU UAAUCGGUCGCCGAAGGAGCAAGCUCUGCGCAUAUGCAGAGUGAAACUCUCAGGCAAAAGGACAGAGGAGUGAA 1842282 1842049 9N3J 1 234 2772158317 A 1 2 235 1 expression tag G 0 9N3J A 2772158317 GB 1 1 P 1