0.011910 0.006876 0.000000 0.000000 0.013753 0.000000 0.000000 0.000000 0.004312 0.00000 0.00000 0.00000 Chen, W. Wang, L. Ruan, K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 83.962 83.962 231.916 C12 H18 O2 194.270 1-Adamantylacetic acid 2-(1-adamantyl)ethanoic acid non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N C N 3 N C N 4 N C N 5 N C N 6 N C N 7 N C N 8 N C N 9 N C N 10 N C N 11 N C N 12 N C N 13 N O N 14 N O N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N N N 34 S C N 35 N C N 36 N O N 37 N C N 38 N O N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N N N 47 S C N 48 N C N 49 N O N 50 N C N 51 N C N 52 N C N 53 N N N 54 N C N 55 N N N 56 N N N 57 N O N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N N N 74 S C N 75 N C N 76 N O N 77 N C N 78 N C N 79 N O N 80 N N N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N N N 91 S C N 92 N C N 93 N O N 94 N C N 95 N C N 96 N O N 97 N O N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N N N 107 R C N 108 N C N 109 N O N 110 N C N 111 N S N 112 N O N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N N N 121 S C N 122 N C N 123 N O N 124 N C N 125 N C N 126 N C N 127 N O N 128 N N N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N N N 141 S C N 142 N C N 143 N O N 144 N C N 145 N C N 146 N C N 147 N O N 148 N O N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N N N 160 N C N 161 N C N 162 N O N 163 N O N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C Y 174 N C Y 175 N N Y 176 N C Y 177 N C Y 178 N N N 179 N O N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N O N 191 N H N 192 N H N 193 N N N 194 S C N 195 N C N 196 N O N 197 S C N 198 N C N 199 N C N 200 N C N 201 N O N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N N N 216 S C N 217 N C N 218 N O N 219 N C N 220 N C N 221 N C N 222 N C N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C N 242 N C N 243 N C N 244 N C N 245 N N N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N N N 263 S C N 264 N C N 265 N O N 266 N C N 267 N C N 268 N S N 269 N C N 270 N O N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 S C N 284 N C N 285 N O N 286 N C Y 287 N C Y 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C N 327 N O N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N N N 337 S C N 338 N C N 339 N O N 340 R C N 341 N O N 342 N C N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N N N 354 S C N 355 N C N 356 N O N 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N N Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N C Y 390 N C N 391 N O N 392 N O N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N N N 405 S C N 406 N C N 407 N O N 408 N C N 409 N C N 410 N C N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N doub N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N doub N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N sing N 172 N sing N 173 N sing Y 174 N sing Y 175 N doub Y 176 N doub N 177 N sing Y 178 N sing N 179 N sing Y 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing Y 282 N doub Y 283 N sing Y 284 N sing N 285 N sing Y 286 N doub N 287 N sing Y 288 N doub N 289 N sing Y 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing Y 351 N doub Y 352 N sing Y 353 N sing N 354 N sing Y 355 N doub Y 356 N sing Y 357 N sing N 358 N sing Y 359 N sing Y 360 N doub N 361 N sing Y 362 N doub N 363 N sing Y 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing Y 379 N doub Y 380 N sing Y 381 N sing N 382 N sing Y 383 N doub N 384 N sing Y 385 N doub N 386 N sing Y 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing To Be Published 0353 Small-Molecule Ligand Screening and Structural Investigation of the TopBP1 BRCT 7-8 Domain 10.2210/pdb9maw/pdb pdb_00009maw 100 1 N PIXEL 2024-11-28 DECTRIS EIGER2 S 9M SINGLE WAVELENGTH M x-ray 1 0.97918 1.0 BL02U1 SSRF 0.97918 SYNCHROTRON SSRF BEAMLINE BL02U1 26125.893 DNA topoisomerase 2-binding protein 1 1 man polymer 194.270 1-Adamantylacetic acid 1 syn non-polymer 18.015 water 128 nat water DNA topoisomerase II-beta-binding protein 1,TopBP1,DNA topoisomerase II-binding protein 1 no no GHMLKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTA GHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGA KVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRTEYIADYLMQESPPHVENYCLPEAIS GHMLKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTA GHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGA KVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRTEYIADYLMQESPPHVENYCLPEAIS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 1 231 TOPBP1, KIAA0259 9606 Homo sapiens 562 Escherichia coli Biological sequence 1 4.53 72.87 VAPOR DIFFUSION, SITTING DROP 0.1 M Citric acid, 2.4 M Ammonium sulfate pH 5.0 277 repository Initial release 1 0 2026-03-18 China National Natural Science Foundation of China (NSFC) kruan@ustc.edu.cn 0000-0001-9358-0451 Ke Ruan principal investigator/group leader N PDBJ N PDBC 2025-03-14 REL REL 1 A O HOH 1728 6.01 A1ENP A1ENP SUBJECT OF INVESTIGATION A1ENP 1-Adamantylacetic acid HOH water Y N 9MAT PDB experimental model LIG 1501 2 A1ENP A1ENP 1501 A HOH 77 3 HOH HOH 1601 A HOH 35 3 HOH HOH 1602 A HOH 78 3 HOH HOH 1603 A HOH 60 3 HOH HOH 1604 A HOH 67 3 HOH HOH 1605 A HOH 121 3 HOH HOH 1606 A HOH 72 3 HOH HOH 1607 A HOH 32 3 HOH HOH 1608 A HOH 144 3 HOH HOH 1609 A HOH 20 3 HOH HOH 1610 A HOH 83 3 HOH HOH 1611 A HOH 6 3 HOH HOH 1612 A HOH 24 3 HOH HOH 1613 A HOH 8 3 HOH HOH 1614 A HOH 14 3 HOH HOH 1615 A HOH 34 3 HOH HOH 1616 A HOH 26 3 HOH HOH 1617 A HOH 73 3 HOH HOH 1618 A HOH 51 3 HOH HOH 1619 A HOH 36 3 HOH HOH 1620 A HOH 7 3 HOH HOH 1621 A HOH 87 3 HOH HOH 1622 A HOH 53 3 HOH HOH 1623 A HOH 12 3 HOH HOH 1624 A HOH 57 3 HOH HOH 1625 A HOH 65 3 HOH HOH 1626 A HOH 135 3 HOH HOH 1627 A HOH 3 3 HOH HOH 1628 A HOH 113 3 HOH HOH 1629 A HOH 37 3 HOH HOH 1630 A HOH 28 3 HOH HOH 1631 A HOH 1 3 HOH HOH 1632 A HOH 104 3 HOH HOH 1633 A HOH 52 3 HOH HOH 1634 A HOH 29 3 HOH HOH 1635 A HOH 22 3 HOH HOH 1636 A HOH 97 3 HOH HOH 1637 A HOH 112 3 HOH HOH 1638 A HOH 95 3 HOH HOH 1639 A HOH 49 3 HOH HOH 1640 A HOH 11 3 HOH HOH 1641 A HOH 38 3 HOH HOH 1642 A HOH 50 3 HOH HOH 1643 A HOH 23 3 HOH HOH 1644 A HOH 58 3 HOH HOH 1645 A HOH 54 3 HOH HOH 1646 A HOH 88 3 HOH HOH 1647 A HOH 94 3 HOH HOH 1648 A HOH 68 3 HOH HOH 1649 A HOH 40 3 HOH HOH 1650 A HOH 16 3 HOH HOH 1651 A HOH 64 3 HOH HOH 1652 A HOH 4 3 HOH HOH 1653 A HOH 18 3 HOH HOH 1654 A HOH 143 3 HOH HOH 1655 A HOH 47 3 HOH HOH 1656 A HOH 76 3 HOH HOH 1657 A HOH 10 3 HOH HOH 1658 A HOH 105 3 HOH HOH 1659 A HOH 19 3 HOH HOH 1660 A HOH 30 3 HOH HOH 1661 A HOH 138 3 HOH HOH 1662 A HOH 2 3 HOH HOH 1663 A HOH 129 3 HOH HOH 1664 A HOH 75 3 HOH HOH 1665 A HOH 103 3 HOH HOH 1666 A HOH 70 3 HOH HOH 1667 A HOH 66 3 HOH HOH 1668 A HOH 91 3 HOH HOH 1669 A HOH 21 3 HOH HOH 1670 A HOH 15 3 HOH HOH 1671 A HOH 71 3 HOH HOH 1672 A HOH 81 3 HOH HOH 1673 A HOH 56 3 HOH HOH 1674 A HOH 90 3 HOH HOH 1675 A HOH 17 3 HOH HOH 1676 A HOH 132 3 HOH HOH 1677 A HOH 43 3 HOH HOH 1678 A HOH 74 3 HOH HOH 1679 A HOH 42 3 HOH HOH 1680 A HOH 96 3 HOH HOH 1681 A HOH 33 3 HOH HOH 1682 A HOH 63 3 HOH HOH 1683 A HOH 126 3 HOH HOH 1684 A HOH 125 3 HOH HOH 1685 A HOH 25 3 HOH HOH 1686 A HOH 108 3 HOH HOH 1687 A HOH 13 3 HOH HOH 1688 A HOH 111 3 HOH HOH 1689 A HOH 139 3 HOH HOH 1690 A HOH 130 3 HOH HOH 1691 A HOH 31 3 HOH HOH 1692 A HOH 79 3 HOH HOH 1693 A HOH 110 3 HOH HOH 1694 A HOH 9 3 HOH HOH 1695 A HOH 98 3 HOH HOH 1696 A HOH 128 3 HOH HOH 1697 A HOH 92 3 HOH HOH 1698 A HOH 27 3 HOH HOH 1699 A HOH 107 3 HOH HOH 1700 A HOH 119 3 HOH HOH 1701 A HOH 114 3 HOH HOH 1702 A HOH 141 3 HOH HOH 1703 A HOH 61 3 HOH HOH 1704 A HOH 82 3 HOH HOH 1705 A HOH 100 3 HOH HOH 1706 A HOH 39 3 HOH HOH 1707 A HOH 102 3 HOH HOH 1708 A HOH 131 3 HOH HOH 1709 A HOH 85 3 HOH HOH 1710 A HOH 46 3 HOH HOH 1711 A HOH 93 3 HOH HOH 1712 A HOH 106 3 HOH HOH 1713 A HOH 115 3 HOH HOH 1714 A HOH 120 3 HOH HOH 1715 A HOH 118 3 HOH HOH 1716 A HOH 117 3 HOH HOH 1717 A HOH 86 3 HOH HOH 1718 A HOH 137 3 HOH HOH 1719 A HOH 109 3 HOH HOH 1720 A HOH 146 3 HOH HOH 1721 A HOH 127 3 HOH HOH 1722 A HOH 136 3 HOH HOH 1723 A HOH 147 3 HOH HOH 1724 A HOH 133 3 HOH HOH 1725 A HOH 142 3 HOH HOH 1726 A HOH 89 3 HOH HOH 1727 A HOH 140 3 HOH HOH 1728 A n 1 1261 A n 2 1262 A n 3 1263 A LEU 1264 n 4 LEU 1264 A LYS 1265 n 5 LYS 1265 A LYS 1266 n 6 LYS 1266 A GLN 1267 n 7 GLN 1267 A TYR 1268 n 8 TYR 1268 A ILE 1269 n 9 ILE 1269 A PHE 1270 n 10 PHE 1270 A GLN 1271 n 11 GLN 1271 A LEU 1272 n 12 LEU 1272 A SER 1273 n 13 SER 1273 A SER 1274 n 14 SER 1274 A LEU 1275 n 15 LEU 1275 A ASN 1276 n 16 ASN 1276 A PRO 1277 n 17 PRO 1277 A GLN 1278 n 18 GLN 1278 A GLU 1279 n 19 GLU 1279 A ARG 1280 n 20 ARG 1280 A ILE 1281 n 21 ILE 1281 A ASP 1282 n 22 ASP 1282 A TYR 1283 n 23 TYR 1283 A CYS 1284 n 24 CYS 1284 A HIS 1285 n 25 HIS 1285 A LEU 1286 n 26 LEU 1286 A ILE 1287 n 27 ILE 1287 A GLU 1288 n 28 GLU 1288 A LYS 1289 n 29 LYS 1289 A LEU 1290 n 30 LEU 1290 A GLY 1291 n 31 GLY 1291 A GLY 1292 n 32 GLY 1292 A LEU 1293 n 33 LEU 1293 A VAL 1294 n 34 VAL 1294 A ILE 1295 n 35 ILE 1295 A GLU 1296 n 36 GLU 1296 A LYS 1297 n 37 LYS 1297 A GLN 1298 n 38 GLN 1298 A CYS 1299 n 39 CYS 1299 A PHE 1300 n 40 PHE 1300 A ASP 1301 n 41 ASP 1301 A PRO 1302 n 42 PRO 1302 A THR 1303 n 43 THR 1303 A CYS 1304 n 44 CYS 1304 A THR 1305 n 45 THR 1305 A HIS 1306 n 46 HIS 1306 A ILE 1307 n 47 ILE 1307 A VAL 1308 n 48 VAL 1308 A VAL 1309 n 49 VAL 1309 A GLY 1310 n 50 GLY 1310 A HIS 1311 n 51 HIS 1311 A PRO 1312 n 52 PRO 1312 A LEU 1313 n 53 LEU 1313 A ARG 1314 n 54 ARG 1314 A ASN 1315 n 55 ASN 1315 A GLU 1316 n 56 GLU 1316 A LYS 1317 n 57 LYS 1317 A TYR 1318 n 58 TYR 1318 A LEU 1319 n 59 LEU 1319 A ALA 1320 n 60 ALA 1320 A SER 1321 n 61 SER 1321 A VAL 1322 n 62 VAL 1322 A ALA 1323 n 63 ALA 1323 A ALA 1324 n 64 ALA 1324 A GLY 1325 n 65 GLY 1325 A LYS 1326 n 66 LYS 1326 A TRP 1327 n 67 TRP 1327 A VAL 1328 n 68 VAL 1328 A LEU 1329 n 69 LEU 1329 A HIS 1330 n 70 HIS 1330 A ARG 1331 n 71 ARG 1331 A SER 1332 n 72 SER 1332 A TYR 1333 n 73 TYR 1333 A LEU 1334 n 74 LEU 1334 A GLU 1335 n 75 GLU 1335 A ALA 1336 n 76 ALA 1336 A CYS 1337 n 77 CYS 1337 A ARG 1338 n 78 ARG 1338 A THR 1339 n 79 THR 1339 A ALA 1340 n 80 ALA 1340 A GLY 1341 n 81 GLY 1341 A HIS 1342 n 82 HIS 1342 A PHE 1343 n 83 PHE 1343 A VAL 1344 n 84 VAL 1344 A GLN 1345 n 85 GLN 1345 A GLU 1346 n 86 GLU 1346 A GLU 1347 n 87 GLU 1347 A ASP 1348 n 88 ASP 1348 A TYR 1349 n 89 TYR 1349 A GLU 1350 n 90 GLU 1350 A TRP 1351 n 91 TRP 1351 A GLY 1352 n 92 GLY 1352 A SER 1353 n 93 SER 1353 A SER 1354 n 94 SER 1354 A SER 1355 n 95 SER 1355 A ILE 1356 n 96 ILE 1356 A LEU 1357 n 97 LEU 1357 A ASP 1358 n 98 ASP 1358 A VAL 1359 n 99 VAL 1359 A LEU 1360 n 100 LEU 1360 A THR 1361 n 101 THR 1361 A GLY 1362 n 102 GLY 1362 A ILE 1363 n 103 ILE 1363 A ASN 1364 n 104 ASN 1364 A VAL 1365 n 105 VAL 1365 A GLN 1366 n 106 GLN 1366 A GLN 1367 n 107 GLN 1367 A ARG 1368 n 108 ARG 1368 A ARG 1369 n 109 ARG 1369 A LEU 1370 n 110 LEU 1370 A ALA 1371 n 111 ALA 1371 A LEU 1372 n 112 LEU 1372 A ALA 1373 n 113 ALA 1373 A ALA 1374 n 114 ALA 1374 A MET 1375 n 115 MET 1375 A ARG 1376 n 116 ARG 1376 A TRP 1377 n 117 TRP 1377 A ARG 1378 n 118 ARG 1378 A LYS 1379 n 119 LYS 1379 A LYS 1380 n 120 LYS 1380 A ILE 1381 n 121 ILE 1381 A GLN 1382 n 122 GLN 1382 A GLN 1383 n 123 GLN 1383 A ARG 1384 n 124 ARG 1384 A GLN 1385 n 125 GLN 1385 A GLU 1386 n 126 GLU 1386 A SER 1387 n 127 SER 1387 A GLY 1388 n 128 GLY 1388 A ILE 1389 n 129 ILE 1389 A VAL 1390 n 130 VAL 1390 A GLU 1391 n 131 GLU 1391 A GLY 1392 n 132 GLY 1392 A ALA 1393 n 133 ALA 1393 A PHE 1394 n 134 PHE 1394 A SER 1395 n 135 SER 1395 A GLY 1396 n 136 GLY 1396 A TRP 1397 n 137 TRP 1397 A LYS 1398 n 138 LYS 1398 A VAL 1399 n 139 VAL 1399 A ILE 1400 n 140 ILE 1400 A LEU 1401 n 141 LEU 1401 A HIS 1402 n 142 HIS 1402 A VAL 1403 n 143 VAL 1403 A ASP 1404 n 144 ASP 1404 A GLN 1405 n 145 GLN 1405 A SER 1406 n 146 SER 1406 A ARG 1407 n 147 ARG 1407 A GLU 1408 n 148 GLU 1408 A ALA 1409 n 149 ALA 1409 A GLY 1410 n 150 GLY 1410 A PHE 1411 n 151 PHE 1411 A LYS 1412 n 152 LYS 1412 A ARG 1413 n 153 ARG 1413 A LEU 1414 n 154 LEU 1414 A LEU 1415 n 155 LEU 1415 A GLN 1416 n 156 GLN 1416 A SER 1417 n 157 SER 1417 A GLY 1418 n 158 GLY 1418 A GLY 1419 n 159 GLY 1419 A ALA 1420 n 160 ALA 1420 A LYS 1421 n 161 LYS 1421 A VAL 1422 n 162 VAL 1422 A LEU 1423 n 163 LEU 1423 A PRO 1424 n 164 PRO 1424 A GLY 1425 n 165 GLY 1425 A HIS 1426 n 166 HIS 1426 A SER 1427 n 167 SER 1427 A VAL 1428 n 168 VAL 1428 A PRO 1429 n 169 PRO 1429 A LEU 1430 n 170 LEU 1430 A PHE 1431 n 171 PHE 1431 A LYS 1432 n 172 LYS 1432 A GLU 1433 n 173 GLU 1433 A ALA 1434 n 174 ALA 1434 A THR 1435 n 175 THR 1435 A HIS 1436 n 176 HIS 1436 A LEU 1437 n 177 LEU 1437 A PHE 1438 n 178 PHE 1438 A SER 1439 n 179 SER 1439 A ASP 1440 n 180 ASP 1440 A LEU 1441 n 181 LEU 1441 A ASN 1442 n 182 ASN 1442 A LYS 1443 n 183 LYS 1443 A LEU 1444 n 184 LEU 1444 A LYS 1445 n 185 LYS 1445 A n 186 1446 A ASP 1447 n 187 ASP 1447 A ASP 1448 n 188 ASP 1448 A SER 1449 n 189 SER 1449 A GLY 1450 n 190 GLY 1450 A VAL 1451 n 191 VAL 1451 A ASN 1452 n 192 ASN 1452 A ILE 1453 n 193 ILE 1453 A ALA 1454 n 194 ALA 1454 A GLU 1455 n 195 GLU 1455 A ALA 1456 n 196 ALA 1456 A ALA 1457 n 197 ALA 1457 A ALA 1458 n 198 ALA 1458 A GLN 1459 n 199 GLN 1459 A ASN 1460 n 200 ASN 1460 A VAL 1461 n 201 VAL 1461 A TYR 1462 n 202 TYR 1462 A CYS 1463 n 203 CYS 1463 A LEU 1464 n 204 LEU 1464 A ARG 1465 n 205 ARG 1465 A THR 1466 n 206 THR 1466 A GLU 1467 n 207 GLU 1467 A TYR 1468 n 208 TYR 1468 A ILE 1469 n 209 ILE 1469 A ALA 1470 n 210 ALA 1470 A ASP 1471 n 211 ASP 1471 A TYR 1472 n 212 TYR 1472 A LEU 1473 n 213 LEU 1473 A MET 1474 n 214 MET 1474 A GLN 1475 n 215 GLN 1475 A GLU 1476 n 216 GLU 1476 A SER 1477 n 217 SER 1477 A PRO 1478 n 218 PRO 1478 A PRO 1479 n 219 PRO 1479 A HIS 1480 n 220 HIS 1480 A VAL 1481 n 221 VAL 1481 A GLU 1482 n 222 GLU 1482 A ASN 1483 n 223 ASN 1483 A TYR 1484 n 224 TYR 1484 A CYS 1485 n 225 CYS 1485 A LEU 1486 n 226 LEU 1486 A PRO 1487 n 227 PRO 1487 A GLU 1488 n 228 GLU 1488 A ALA 1489 n 229 ALA 1489 A ILE 1490 n 230 ILE 1490 A SER 1491 n 231 SER 1491 A 2.4169 0.9556 -0.2423 4.1540 1.6742 5.7921 0.1984 -0.5957 -0.1309 0.3417 -0.3403 0.2570 0.3804 -0.6532 0.0523 0.2572 -0.0698 0.0300 0.3054 -0.0228 0.2213 refined -45.5347 16.2956 -29.8107 X-RAY DIFFRACTION 3.1609 0.9076 1.2808 2.1845 1.0739 1.6858 0.0207 -0.2660 0.2887 -0.0033 -0.1787 0.2196 -0.2239 -0.2585 0.1512 0.2782 -0.0119 0.0247 0.2519 -0.0498 0.2064 refined -40.7992 24.0043 -34.3245 X-RAY DIFFRACTION 3.9868 -1.0980 -0.2403 7.5927 2.8963 5.4454 -0.2432 0.3641 0.0987 -0.5984 -0.0016 0.0414 -0.4365 0.1804 0.2453 0.3183 -0.1343 -0.0297 0.3099 0.0209 0.1565 refined -30.4823 28.7966 -39.4357 X-RAY DIFFRACTION 2.9546 1.1697 0.9939 1.9894 -0.0032 2.0032 0.0365 0.1215 -0.3816 -0.0137 -0.0027 -0.1517 0.3039 0.1039 -0.0032 0.1640 0.0433 0.0548 0.1645 -0.0081 0.2272 refined -13.5762 26.6219 -24.2955 X-RAY DIFFRACTION 0.7643 0.9606 -1.4032 4.1878 0.3602 4.6248 -0.1486 -0.1209 0.4386 -0.1919 -0.0060 -0.0183 -0.5877 0.0095 0.0865 0.1922 -0.0048 0.0682 0.1762 -0.0624 0.2020 refined -13.2454 38.0539 -30.7635 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain 'A' and (resid 1264 through 1289 ) X-RAY DIFFRACTION 2 chain 'A' and (resid 1290 through 1364 ) X-RAY DIFFRACTION 3 chain 'A' and (resid 1365 through 1386 ) X-RAY DIFFRACTION 4 chain 'A' and (resid 1387 through 1474 ) X-RAY DIFFRACTION 5 chain 'A' and (resid 1475 through 1491 ) author_and_software_defined_assembly PISA 1 monomeric gel filtration 370 -0 12270 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 1293 A O LEU 33 A N PHE 1270 A N PHE 10 A N GLN 1271 A N GLN 11 A O VAL 1308 A O VAL 48 A N ILE 1307 A N ILE 47 A O LEU 1329 A O LEU 69 A O LYS 1421 A O LYS 161 A N VAL 1399 A N VAL 139 A N ILE 1400 A N ILE 140 A O HIS 1436 A O HIS 176 A N LEU 1437 A N LEU 177 A O TYR 1462 A O TYR 202 1 A CG LYS 1445 A CG LYS 185 1 Y 1 A CD LYS 1445 A CD LYS 185 1 Y 1 A CE LYS 1445 A CE LYS 185 1 Y 1 A NZ LYS 1445 A NZ LYS 185 1 Y 1 A GLY 1261 A GLY 1 1 Y 1 A HIS 1262 A HIS 2 1 Y 1 A MET 1263 A MET 3 1 Y 1 A PRO 1446 A PRO 186 1 Y 1 A HIS 1426 -150.96 25.10 0.2368 0.1971 0.1991 2.45 45.33 897 17461 5.14 93.66 0.30 1 FREE R-VALUE 1.34 MOLECULAR REPLACEMENT 19.06 0.90 1.11 ML FLAT BULK SOLVENT MODEL 2.45 45.33 128 1946 14 0 1804 0.002 1868 0.494 2530 4.958 259 0.040 277 0.004 324 0.2896 0.2522 2.60 168 2830 100.00 0.2869 0.2374 2.80 150 2895 100.00 0.2762 0.2212 3.09 155 2856 100.00 0.2741 0.2090 3.53 147 2908 99.00 0.2084 0.1654 4.45 97 1976 66.00 0.1798 0.1653 45.33 180 3099 98.00 2.45 45.33 9MAW 17585 0.996 0.191 0.057 0.200 1.04 1 13.2 207808 11.8 94.7 0.891 2.45 2.55 25211 2046 0.797 0.258 0.928 0.93 1 3.5 12.3 99.9 refinement PHENIX (1.19_4092: ???) data scaling Aimless data reduction XDS phasing MOLREP N Crystal structure of TOPBP1BRCT7-8 domain in complex with 1-Adamantaneacetic acid 1 N N 2 N N 3 N N A ASN 1276 A ASN 16 HELX_P A LEU 1290 A LEU 30 1 AA1 15 A ASN 1315 A ASN 55 HELX_P A ALA 1324 A ALA 64 1 AA2 10 A ARG 1331 A ARG 71 HELX_P A GLY 1341 A GLY 81 1 AA3 11 A GLU 1346 A GLU 86 HELX_P A GLU 1350 A GLU 90 5 AA4 5 A SER 1353 A SER 93 HELX_P A ASP 1358 A ASP 98 1 AA5 6 A ASN 1364 A ASN 104 HELX_P A SER 1387 A SER 127 1 AA6 24 A ARG 1407 A ARG 147 HELX_P A GLY 1418 A GLY 158 1 AA7 12 A SER 1427 A SER 167 HELX_P A LYS 1432 A LYS 172 5 AA8 6 A ASN 1452 A ASN 192 HELX_P A GLN 1459 A GLN 199 1 AA9 8 A THR 1466 A THR 206 HELX_P A GLN 1475 A GLN 215 1 AB1 10 A HIS 1480 A HIS 220 HELX_P A TYR 1484 A TYR 224 5 AB2 5 A LEU 1486 A LEU 226 HELX_P A ILE 1490 A ILE 230 5 AB3 5 ISOMERASE TopBP1, ISOMERASE TOPB1_HUMAN UNP 1 1264 Q92547 LKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTAGHF VQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVL PGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRTEYIADYLMQESPPHVENYCLPEAIS 1264 1491 9MAW 1264 1491 Q92547 A 1 4 231 1 expression tag GLY 1261 9MAW A Q92547 UNP 1 1 expression tag HIS 1262 9MAW A Q92547 UNP 2 1 expression tag MET 1263 9MAW A Q92547 UNP 3 4 4 parallel parallel parallel parallel parallel parallel A LEU 1293 A LEU 33 A VAL 1294 A VAL 34 A ILE 1269 A ILE 9 A SER 1273 A SER 13 A HIS 1306 A HIS 46 A VAL 1309 A VAL 49 A TRP 1327 A TRP 67 A LEU 1329 A LEU 69 A LYS 1421 A LYS 161 A VAL 1422 A VAL 162 A LYS 1398 A LYS 138 A HIS 1402 A HIS 142 A HIS 1436 A HIS 176 A SER 1439 A SER 179 A TYR 1462 A TYR 202 A ARG 1465 A ARG 205 179 P 65 2 2