1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 0000-0003-1854-8907 Santos, B.P.O. 0000-0003-4912-0233 De Magalhaes, M.T.Q. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N C N 7 N O N 8 N N N 9 N O N 10 N H N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N H N 18 N N N 19 S C N 20 N C N 21 N O N 22 N C N 23 N C N 24 N O N 25 N O N 26 N O N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N N N 35 N C N 36 N C N 37 N O N 38 N O N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N N N 45 S C N 46 N C N 47 N O N 48 S C N 49 N C N 50 N C N 51 N C N 52 N O N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N N N 67 S C N 68 N C N 69 N O N 70 N C N 71 N C N 72 N C N 73 N C N 74 N O N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N C N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N H N 115 N H N 116 N N N 117 S C N 118 N C N 119 N O N 120 N C Y 121 N C Y 122 N C Y 123 N C Y 124 N C Y 125 N C Y 126 N C N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N N N 140 S C N 141 N C N 142 N O N 143 N C N 144 N O N 145 N O N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N N N 154 S C N 155 N C N 156 N O N 157 N C N 158 N C N 159 N C N 160 N O N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N doub N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N doub N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N doub N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N doub N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing Y 120 N doub Y 121 N sing Y 122 N sing N 123 N sing Y 124 N doub N 125 N sing Y 126 N doub N 127 N sing Y 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing Biochim Biophys Acta Gen Subj 1872-8006 1865 129989 129989 10.1016/j.bbagen.2021.129989 34389467 Schistocins: Novel antimicrobial peptides encrypted in the Schistosoma mansoni Kunitz Inhibitor SmKI-1. 2021 10.2210/pdb7m79/pdb pdb_00007m79 10.13018/BMR30894 1444.719 Schistocin-4 antimicrobial peptide 1 syn polymer no yes GILDILNKVSNLF(NH2) GILDILNKVSNLFX A polypeptide(L) n n n n n n n n n n n n n n pdbx_database_status chem_comp_atom chem_comp_bond database_2 pdbx_entry_details pdbx_modification_feature repository Initial release Other Data collection Database references Structure summary 1 0 2021-09-15 1 1 2023-06-14 1 2 2024-11-20 _pdbx_database_status.status_code_nmr_data _database_2.pdbx_DOI _pdbx_entry_details.has_protein_modification Brazil Coordination for the Improvement of Higher Education Personnel 88882.349264/2019-01 NMR Structure of Schistocin-4 antimicrobial peptide in presence of DPC-d38 micelles N RCSB Y RCSB 2021-03-26 REL REL REL REL 6183 Schistosoma mansoni sample 1 14 N Y A NH2 14 Terminal amidation A NH2 14 A PHE 13 PHE A PHE 13 1_555 NH2 15 1_555 None structures with the lowest energy 40 10 isotropic 1 2D 1H-1H TOCSY isotropic 1 2D 1H-1H NOESY isotropic 1 2D 1H-13C HSQC 90 % natural abundance 0.5 % natural abundance 2 mM natural abundance 200 mM natural abundance 50 mM conditions_1 6.2 pH 1 atm 300 K simulated annealing 1 lowest energy 90 % Buffer, 0.5 % DSS, 2 mM peptide, 200 mM DPC, 90% H2O/10% D2O 1H_sample 90% H2O/10% D2O solution Bruker Biospin processing TopSpin CCPN data analysis CcpNmr Analysis Linge, O'Donoghue and Nilges structure calculation ARIA Brunger, Adams, Clore, Gros, Nilges and Read refinement CNS 500 Bruker AVANCE III GLY 1 n 1 GLY 1 A ILE 2 n 2 ILE 2 A LEU 3 n 3 LEU 3 A ASP 4 n 4 ASP 4 A ILE 5 n 5 ILE 5 A LEU 6 n 6 LEU 6 A ASN 7 n 7 ASN 7 A LYS 8 n 8 LYS 8 A VAL 9 n 9 VAL 9 A SER 10 n 10 SER 10 A ASN 11 n 11 ASN 11 A LEU 12 n 12 LEU 12 A PHE 13 n 13 PHE 13 A NH2 14 n 14 NH2 14 A author_defined_assembly 1 monomeric none 120 1 1430 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A H3 OD2 GLY ASP 1 4 1.60 7 A A H2 OD2 GLY ASP 1 4 1.58 N NMR Structure of Schistocin-3.1 antimicrobial peptide in presence of DPC-d38 micelles 1 N N A GLY 1 A GLY 1 HELX_P A PHE 13 A PHE 13 1 AA1 13 covale 1.323 both A PHE 13 A C PHE 13 1_555 A NH2 14 A N NH2 14 1_555 ANTIMICROBIAL PROTEIN antimicrobial peptide, ANTIMICROBIAL PROTEIN 7M79 PDB 1 1 7M79 1 14 7M79 1 14 7M79 A 1 1 14