1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 0000-0002-3694-3989 MacRaild, C.A. Robinson, S.D. Chhabra, S. Norton, R.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C4 H9 N O2 103.120 n ALPHA-AMINOBUTYRIC ACID L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N C N 7 N O N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N N N 18 S C N 19 N C N 20 N O N 21 N C N 22 N C N 23 N C N 24 N N N 25 N C N 26 N N N 27 N N N 28 N O N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N N N 45 S C N 46 N C N 47 N O N 48 N C N 49 N C N 50 N O N 51 N N N 52 N O N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N N N 62 S C N 63 N C N 64 N O N 65 N C N 66 N C N 67 N O N 68 N O N 69 N O N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N N N 78 R C N 79 N C N 80 N O N 81 N C N 82 N S N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N N N 92 S C N 93 N C N 94 N O N 95 N C N 96 N C N 97 N C N 98 N O N 99 N O N 100 N O N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N N N 111 N C N 112 N C N 113 N O N 114 N O N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N N N 121 S C N 122 N C N 123 N O N 124 N C Y 125 N C Y 126 N N Y 127 N C Y 128 N C Y 129 N N N 130 N O N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 S C N 146 N C N 147 N C N 148 N C N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N N N 164 S C N 165 N C N 166 N O N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 S C N 182 N C N 183 N O N 184 N C N 185 N O N 186 N O N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N N N 195 S C N 196 N C N 197 N O N 198 N C Y 199 N C Y 200 N C Y 201 N C Y 202 N C Y 203 N C Y 204 N C N 205 N O N 206 N O N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N doub N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N doub N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N doub N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N doub N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing Y 124 N sing Y 125 N doub Y 126 N doub N 127 N sing Y 128 N sing N 129 N sing Y 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing Y 196 N doub Y 197 N sing Y 198 N sing N 199 N sing Y 200 N doub N 201 N sing Y 202 N doub N 203 N sing Y 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 64 3222 3233 10.1021/acs.jmedchem.0c02151 33724033 Alkyne-Bridged alpha-Conotoxin Vc1.1 Potently Reverses Mechanical Allodynia in Neuropathic Pain Models. 2021 0000-0002-3694-3989 0000-0001-8961-7194 0000-0002-7030-2288 0000-0001-8893-0584 0000-0003-3859-1312 10.2210/pdb7knn/pdb pdb_00007knn 1777.934 Alpha-conotoxin Vc1a 1 syn polymer Alpha-Vc1a,ACV1,Vc1.1 no yes G(ABA)CSDPR(ABA)NYDHPEIC GACSDPRANYDHPEIC A polypeptide(L) n n n n n n n n n n n n n n n n pdbx_database_status chem_comp_atom chem_comp_bond repository Initial release Other Data collection 1 0 2021-09-15 1 1 2023-06-14 1 2 2023-11-15 _pdbx_database_status.status_code_nmr_data Australia Australian Research Council (ARC) LP120100414 Solution structure of the alpha-conotoxin analogue [2-8]-alkyne Vc1.1 N RCSB Y RCSB 2020-11-05 REL REL REL REL 319920 Queen Victoria cone Conus victoriae sample 1 16 N structures with the lowest energy 100 20 isotropic 1 2D 1H-1H TOCSY isotropic 1 2D 1H-1H NOESY isotropic 1 2D DQF-COSY isotropic 1 2D 1H-15N soFastHMQC isotropic 1 2D 1H-1H NOESY isotropic 1 2D 1H-13C HSQC 1 mg/mL natural abundance 1 mg/mL natural abundance 0 M 1 4.8 pH 1 atm 298 K 0 M 1 4.8 pH* 1 atm 298 K torsion angle dynamics 1 lowest energy 1 mg/mL [2-8]-alkyne Vc1.1, 90% H2O/10% D2O 1 90% H2O/10% D2O solution 1 mg/mL [2-8]-alkyne Vc1.1, 100% D2O 1 100% D2O solution CCPN chemical shift assignment CcpNmr Analysis Schwieters, Kuszewski, Tjandra and Clore refinement X-PLOR NIH 2.40 Schwieters, Kuszewski, Tjandra and Clore structure calculation X-PLOR NIH 2.40 600 Bruker AVANCE III GLY 1 n 1 GLY 1 A ABA 2 n 2 ABA 2 A CYS 3 n 3 CYS 3 A SER 4 n 4 SER 4 A ASP 5 n 5 ASP 5 A PRO 6 n 6 PRO 6 A ARG 7 n 7 ARG 7 A ABA 8 n 8 ABA 8 A ASN 9 n 9 ASN 9 A TYR 10 n 10 TYR 10 A ASP 11 n 11 ASP 11 A HIS 12 n 12 HIS 12 A PRO 13 n 13 PRO 13 A GLU 14 n 14 GLU 14 A ILE 15 n 15 ILE 15 A CYS 16 n 16 CYS 16 A author_defined_assembly 1 monomeric none 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ABA 2 -152.81 5.03 3 A PRO 6 -70.65 27.68 4 A PRO 6 -65.56 15.68 4 A ASN 9 -162.83 -168.45 4 A ILE 15 -84.14 -98.85 5 A ABA 2 -158.91 16.54 6 A PRO 6 -62.26 2.07 6 A ASN 9 -164.39 -169.52 6 A ILE 15 -102.18 -162.16 7 A PRO 6 -68.58 7.60 8 A ILE 15 -92.28 -155.72 9 A PRO 6 -61.81 5.35 9 A ILE 15 -102.58 -150.34 10 A PRO 6 -69.80 14.67 11 A ABA 2 -145.30 10.08 11 A PRO 6 -63.86 16.53 11 A ILE 15 -87.67 -159.52 12 A ABA 2 -149.42 11.53 12 A PRO 6 -63.96 24.41 12 A ILE 15 -82.20 -85.82 13 A PRO 6 -63.46 8.77 13 A ASN 9 -165.21 -169.27 14 A ABA 2 -154.85 11.37 14 A PRO 6 -69.65 14.28 14 A ILE 15 -106.68 -159.91 15 A ABA 2 -159.94 15.50 15 A ILE 15 -82.19 -146.56 16 A ABA 2 -157.39 22.45 16 A PRO 13 -69.99 1.33 16 A ILE 15 -97.42 -157.94 17 A ABA 2 -158.00 26.93 17 A PRO 6 -68.07 2.13 18 A ABA 2 -153.31 7.40 18 A PRO 6 -68.16 27.95 18 A ILE 15 -97.44 -156.80 19 A ABA 2 -153.37 5.01 20 A PRO 6 -64.56 15.19 20 A ILE 15 -85.00 -152.55 N Solution structure of the alpha-conotoxin analogue [2-8]-alkyne Vc1.1 1 N N disulf 2.035 A CYS 3 A SG CYS 3 1_555 A CYS 16 A SG CYS 16 1_555 covale 1.325 both A GLY 1 A C GLY 1 1_555 A ABA 2 A N ABA 2 1_555 covale 1.336 both A ABA 2 A C ABA 2 1_555 A CYS 3 A N CYS 3 1_555 covale 1.207 none A ABA 2 A CG ABA 2 1_555 A ABA 8 A CG ABA 8 1_555 covale 1.323 both A ARG 7 A C ARG 7 1_555 A ABA 8 A N ABA 8 1_555 covale 1.312 both A ABA 8 A C ABA 8 1_555 A ASN 9 A N ASN 9 1_555 TOXIN Conotoxin dicarba, TOXIN CA1A_CONVC UNP 1 50 P69747 GCCSDPRCNYDHPEIC 50 65 7KNN 1 16 P69747 A 1 1 16 1 CYS conflict ABA 2 7KNN A P69747 UNP 51 2 1 CYS conflict ABA 8 7KNN A P69747 UNP 57 8