0.036744 0.000000 0.008937 0.000000 0.018807 0.000000 0.000000 0.000000 0.037816 0.00000 0.00000 0.00000 Kanazawa, H. Kondo, J. Romolini, G. Cerretani, C. Lanza, A. Huang, Z. Vosch, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 103.67 90.00 27.215 53.171 27.215 Ag 1 107.868 SILVER ION non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer N 1 N AG N 2 N CL N 3 N O N 4 N P N 5 N O N 6 N O N 7 N O N 8 N C N 9 R C N 10 N O N 11 S C N 12 N O N 13 N C N 14 R C Y 15 N N Y 16 N C Y 17 N N Y 18 N C Y 19 N C N 20 N N Y 21 N N Y 22 N C Y 23 N N Y 24 N C N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N O N 40 N P N 41 N O N 42 N O N 43 N O N 44 N C N 45 R C N 46 N O N 47 S C N 48 N O N 49 N C N 50 R C N 51 N N N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N C N 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N P N 75 N O N 76 N O N 77 N O N 78 N C N 79 R C N 80 N O N 81 S C N 82 N O N 83 N C N 84 R C Y 85 N N Y 86 N C Y 87 N N Y 88 N C N 89 N C N 90 N O N 91 N N N 92 N C N 93 N N N 94 N N Y 95 N C N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N H N 112 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing DE Small Struct 2688-4062 10.1002/sstr.202500022 Shining Bright at 960 nm: A 28-Silver-Atom Nanorod Stabilized by DNA 2025 10.2210/pdb9khw/pdb pdb_00009khw 100 1 Y 100 2 Y PIXEL 2024-10-12 DECTRIS PILATUS 6M PIXEL 2024-10-20 DECTRIS EIGER2 S 16M SINGLE WAVELENGTH M x-ray 1 SINGLE WAVELENGTH M x-ray 2 1.9 1.0 0.6199 1.0 BL-5A Photon Factory 1.9 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-5A BioMAX MAX IV 0.6199 SYNCHROTRON MAX IV BEAMLINE BioMAX 4870.146 DNA (5'-D(*CP*CP*GP*CP*GP*CP*GP*CP*GP*CP*CP*GP*CP*GP*AP*A)-3') 2 syn polymer 107.868 SILVER ION 28 syn non-polymer 35.453 CHLORIDE ION 2 syn non-polymer 18.015 water 39 nat water no no (DC)(DC)(DG)(DC)(DG)(DC)(DG)(DC)(DG)(DC)(DC)(DG)(DC)(DG)(DA)(DA) CCGCGCGCGCCGCGAA A,B polydeoxyribonucleotide n n n n n n n n n n n n n n n n 2 1.96 37.38 VAPOR DIFFUSION, SITTING DROP 7.0 50 mM MOPS, 10 mM spermine, 10 mM KNO3, 10% MPD 293 VAPOR DIFFUSION, HANGING DROP 7.0 50 mM 3-(N-morpholino)propanesulfonic acid, 10 mM spermine, 10 mM Ca(NO3), 10% 2-methyl-2,4-pentanediol against a reservoir solution of 40% 2-methyl-2,4-pentanediol. 293 -9.268 A 4 A 11 -82.521 A_DC4:DC11_A 1 37.689 1.614 -0.470 -3.371 -25.985 A 5 A 1 148.192 A_DG5:DC1_A 2 -6.215 0.049 0.239 -3.072 -0.964 4 A 9 A 15 -114.814 A_DG9:DA15_A 3 -5.322 -2.120 -0.212 3.185 -18.733 A 16 A 7 -162.946 A_DA16:DG7_A 4 -19.336 0.896 0.350 3.860 18.546 B 7 B 16 162.875 B_DG7:DA16_B 5 19.210 -0.852 -0.296 -3.923 -0.816 4 B 9 B 15 -114.862 B_DG9:DA15_B 6 -5.480 -2.110 -0.238 3.195 0.082 B 10 B 14 -97.452 B_DC10:DG14_B 7 5.184 1.343 0.005 1.892 -18.703 B 2 B 13 96.927 B_DC2:DC13_B 8 -1.363 -0.944 2.496 3.271 -3.355 165.139 A A 4 5 33.307 A A 11 1 -1.617 63.788 2.087 -2.747 AA_DC4DG5:DC1DC11_AA 1 -147.831 77.190 76.779 -0.909 0.051 -2.314 106.872 A A 5 9 -3.411 A A 1 15 -1.918 -5.471 2.335 5.334 AA_DG5DG9:DA15DC1_AA 2 -14.145 8.820 106.121 3.273 -1.332 0.021 -179.550 A B 16 7 -52.625 A B 7 16 0.105 105.237 -2.965 -2.484 AB_DA16DG7:DA16DG7_BA 3 -140.151 -70.084 -169.094 1.240 -1.485 1.603 173.999 B B 7 9 42.282 B B 16 15 0.436 83.223 -0.201 3.222 BB_DG7DG9:DA15DA16_BB 4 -150.668 76.547 80.684 1.385 -0.312 3.365 38.247 B B 9 10 -5.176 B B 15 14 3.239 -3.387 -0.023 -1.617 BB_DG9DC10:DG14DA15_BB 5 -0.038 0.058 38.102 -2.038 0.030 -0.147 -163.354 B B 10 2 11.735 B B 14 13 -0.674 -21.774 0.293 2.425 BB_DC10DC2:DC13DG14_BB 6 161.276 86.921 -30.557 -1.268 -0.165 repository Initial release 1 0 2025-04-02 Denmark Novo Nordisk Foundation NNF22OC0073734 Denmark Independent Research Fund Denmark - Technology and Production Sciences 0136-00024B Denmark Independent Research Fund Denmark - Technology and Production Sciences 3103-00279B European Union Marie Sklodowska-Curie Actions, FragNET ITN NIR-emitting Ag-DNAs 101151897 Japan Japan Agency for Medical Research and Development (AMED) JP24ama121014 j.kondo@sophia.ac.jp 0000-0002-5682-3685 Kondo Jiro principal investigator/group leader tom@chem.ku.dk 0000-0001-5435-2181 Tom Vosch principal investigator/group leader N PDBJ Y PDBJ 2024-11-11 REL REL CL CL SUBJECT OF INVESTIGATION AG AG SUBJECT OF INVESTIGATION AG SILVER ION CL CHLORIDE ION HOH water 32630 synthetic construct sample 1 16 Y N AG 1 2 AG AG 101 A AG 2 2 AG AG 102 A AG 3 2 AG AG 103 A AG 4 2 AG AG 104 A AG 5 2 AG AG 105 A AG 6 2 AG AG 106 A AG 7 2 AG AG 107 A AG 8 2 AG AG 108 A AG 9 2 AG AG 109 A AG 10 2 AG AG 110 A AG 11 2 AG AG 111 A AG 12 2 AG AG 112 A AG 13 2 AG AG 113 A AG 14 2 AG AG 114 A CL 1 3 CL CL 115 A AG 15 2 AG AG 101 B AG 16 2 AG AG 102 B AG 17 2 AG AG 103 B AG 18 2 AG AG 104 B AG 19 2 AG AG 105 B AG 20 2 AG AG 106 B AG 21 2 AG AG 107 B AG 22 2 AG AG 108 B AG 23 2 AG AG 109 B AG 24 2 AG AG 110 B AG 25 2 AG AG 111 B AG 26 2 AG AG 112 B AG 27 2 AG AG 113 B AG 28 2 AG AG 114 B CL 2 3 CL CL 115 B HOH 1 4 HOH HOH 201 A HOH 25 4 HOH HOH 202 A HOH 22 4 HOH HOH 203 A HOH 21 4 HOH HOH 204 A HOH 11 4 HOH HOH 205 A HOH 8 4 HOH HOH 206 A HOH 3 4 HOH HOH 207 A HOH 6 4 HOH HOH 208 A HOH 12 4 HOH HOH 209 A HOH 19 4 HOH HOH 210 A HOH 33 4 HOH HOH 211 A HOH 4 4 HOH HOH 212 A HOH 32 4 HOH HOH 213 A HOH 15 4 HOH HOH 214 A HOH 16 4 HOH HOH 215 A HOH 31 4 HOH HOH 216 A HOH 36 4 HOH HOH 217 A HOH 14 4 HOH HOH 201 B HOH 34 4 HOH HOH 202 B HOH 17 4 HOH HOH 203 B HOH 24 4 HOH HOH 204 B HOH 10 4 HOH HOH 205 B HOH 18 4 HOH HOH 206 B HOH 7 4 HOH HOH 207 B HOH 2 4 HOH HOH 208 B HOH 26 4 HOH HOH 209 B HOH 9 4 HOH HOH 210 B HOH 13 4 HOH HOH 211 B HOH 28 4 HOH HOH 212 B HOH 5 4 HOH HOH 213 B HOH 39 4 HOH HOH 214 B HOH 29 4 HOH HOH 215 B HOH 20 4 HOH HOH 216 B HOH 27 4 HOH HOH 217 B HOH 23 4 HOH HOH 218 B HOH 30 4 HOH HOH 219 B HOH 35 4 HOH HOH 220 B HOH 38 4 HOH HOH 221 B HOH 37 4 HOH HOH 222 B DC 1 n 1 DC 1 A DC 2 n 2 DC 2 A DG 3 n 3 DG 3 A DC 4 n 4 DC 4 A DG 5 n 5 DG 5 A DC 6 n 6 DC 6 A DG 7 n 7 DG 7 A DC 8 n 8 DC 8 A DG 9 n 9 DG 9 A DC 10 n 10 DC 10 A DC 11 n 11 DC 11 A DG 12 n 12 DG 12 A DC 13 n 13 DC 13 A DG 14 n 14 DG 14 A DA 15 n 15 DA 15 A DA 16 n 16 DA 16 A DC 1 n 1 DC 1 B DC 2 n 2 DC 2 B DG 3 n 3 DG 3 B DC 4 n 4 DC 4 B DG 5 n 5 DG 5 B DC 6 n 6 DC 6 B DG 7 n 7 DG 7 B DC 8 n 8 DC 8 B DG 9 n 9 DG 9 B DC 10 n 10 DC 10 B DC 11 n 11 DC 11 B DG 12 n 12 DG 12 B DC 13 n 13 DC 13 B DG 14 n 14 DG 14 B DA 15 n 15 DA 15 B DA 16 n 16 DA 16 B fixed target fixed target author_and_software_defined_assembly PISA 2 dimeric Electron Dispersive X-ray Spectroscopy mass spectrometry 5790 -196 3790 A DC 1 A O2 DC 1 1_555 A AG 107 I AG AG 1_555 A DG 14 A N1 DG 14 1_555 97.5 A DC 1 A N3 DC 1 1_555 A AG 110 L AG AG 1_555 A DG 5 A O6 DG 5 1_555 92.2 A DC 2 A N3 DC 2 1_555 A AG 102 D AG AG 1_555 A DC 13 A O2 DC 13 1_555 99.6 A DC 2 A O2 DC 2 1_555 A AG 105 G AG AG 1_555 A DC 4 A N3 DC 4 1_555 91.9 A DG 3 A N7 DG 3 1_555 A AG 101 C AG AG 1_555 A DG 12 A N7 DG 12 1_555 102.4 A DC 4 A O2 DC 4 1_555 A AG 104 F AG AG 1_555 A DC 10 A O2 DC 10 1_555 119.6 A DC 4 A O2 DC 4 1_555 A AG 104 F AG AG 1_555 A DC 11 A N3 DC 11 1_555 88.9 A DC 10 A O2 DC 10 1_555 A AG 104 F AG AG 1_555 A DC 11 A N3 DC 11 1_555 87.0 A DC 6 A O2 DC 6 1_555 A AG 111 M AG AG 1_555 A DG 9 A N1 DG 9 1_555 95.4 A DG 7 A O6 DG 7 1_555 A AG 113 O AG AG 1_555 A DA 16 A N1 DA 16 1_555 92.0 A DG 9 A O6 DG 9 1_555 A AG 109 K AG AG 1_555 A DA 15 A N1 DA 15 1_555 92.1 A DC 10 A N3 DC 10 1_555 A AG 106 H AG AG 1_555 A DG 14 A O6 DG 14 1_555 92.6 A DC 11 A O2 DC 11 1_555 A AG 103 E AG AG 1_555 A DC 13 A N3 DC 13 1_555 99.3 B DC 1 B N3 DC 1 1_555 B AG 106 W AG AG 1_555 B DG 5 B O6 DG 5 1_555 92.2 B DC 1 B O2 DC 1 1_555 B AG 108 Y AG AG 1_555 B DG 14 B N1 DG 14 1_555 98.1 B DC 2 B O2 DC 2 1_555 B AG 110 AA AG AG 1_555 B DC 4 B N3 DC 4 1_555 90.2 B DC 2 B N3 DC 2 1_555 B AG 112 CA AG AG 1_555 B DC 13 B O2 DC 13 1_555 99.6 B DG 3 B N7 DG 3 1_555 B AG 114 EA AG AG 1_555 B DG 12 B N7 DG 12 1_555 101.1 B DC 4 B O2 DC 4 1_555 B AG 111 BA AG AG 1_555 B DC 10 B O2 DC 10 1_555 120.9 B DC 4 B O2 DC 4 1_555 B AG 111 BA AG AG 1_555 B DC 11 B N3 DC 11 1_555 90.0 B DC 10 B O2 DC 10 1_555 B AG 111 BA AG AG 1_555 B DC 11 B N3 DC 11 1_555 87.0 B DC 6 B O2 DC 6 1_555 B AG 103 T AG AG 1_555 B DG 9 B N1 DG 9 1_555 95.1 B DG 7 B O6 DG 7 1_555 B AG 104 U AG AG 1_555 B DA 16 B N1 DA 16 1_555 91.9 B DG 9 B O6 DG 9 1_555 B AG 105 V AG AG 1_555 B DA 15 B N1 DA 15 1_555 92.1 B DC 10 B N3 DC 10 1_555 B AG 109 Z AG AG 1_555 B DG 14 B O6 DG 14 1_555 91.5 B DC 11 B O2 DC 11 1_555 B AG 113 DA AG AG 1_555 B DC 13 B N3 DC 13 1_555 99.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.1642 0.1631 0.1632 1.30 16.82 3521 35654 9.88 97.16 0.10 1 FREE R-VALUE 1.98 AB INITIO PHASING 19.95 0.90 1.10 ML FLAT BULK SOLVENT MODEL 1.30 16.82 39 715 30 646 0 0.009 724 1.210 1112 28.714 312 0.097 126 0.018 32 0.2676 0.2335 1.31 132 1189 96.00 0.2502 0.2342 1.33 138 1257 96.00 0.2243 0.2214 1.35 146 1303 97.00 0.2757 0.2155 1.37 143 1280 96.00 0.2001 0.2181 1.40 139 1244 96.00 0.1800 0.2176 1.42 142 1318 98.00 0.1995 0.2127 1.45 136 1272 97.00 0.1992 0.2026 1.47 147 1337 98.00 0.1946 0.2146 1.50 143 1276 97.00 0.2174 0.2155 1.54 147 1256 97.00 0.2367 0.1921 1.57 140 1311 97.00 0.2775 0.2110 1.61 142 1291 98.00 0.2026 0.1801 1.66 139 1287 98.00 0.1607 0.1841 1.70 148 1335 98.00 0.1409 0.1702 1.76 141 1258 98.00 0.1497 0.1652 1.82 145 1323 98.00 0.1351 0.1396 1.89 136 1283 98.00 0.1499 0.1281 1.98 145 1309 98.00 0.1304 0.1284 2.08 137 1310 98.00 0.1258 0.1232 2.21 125 1313 98.00 0.1093 0.1226 2.39 144 1294 97.00 0.1062 0.1157 2.62 149 1239 96.00 0.1635 0.1430 3.00 133 1298 97.00 0.1747 0.1657 3.78 138 1302 98.00 0.1749 0.1688 16.82 146 1248 95.00 1.3 26.4 9KHW 35689 0.993 0.111 0.13 2 7.25 3.6 97.1 0.319 1.30 1.33 2549 0.899 0.376 2 0.288 1.33 1.37 2543 0.918 0.339 2 0.266 1.37 1.41 2478 0.939 0.314 2 0.267 1.41 1.45 2443 0.933 0.315 2 0.247 1.45 1.5 2414 0.938 0.291 2 0.249 1.50 1.55 2202 0.931 0.295 2 0.235 1.55 1.61 2257 0.951 0.275 2 0.203 1.61 1.67 2089 0.96 0.238 2 0.184 1.67 1.75 2071 0.962 0.216 2 0.154 1.75 1.83 1967 0.973 0.181 2 0.133 1.83 1.93 1919 0.982 0.156 2 0.102 1.93 2.05 1737 0.987 0.12 2 0.089 2.05 2.19 1646 0.989 0.104 2 0.074 2.19 2.37 1539 0.992 0.087 2 0.068 2.37 2.59 1371 0.996 0.08 2 0.076 2.59 2.9 1268 0.991 0.089 2 0.068 2.90 3.35 1143 0.995 0.079 2 0.067 3.35 4.1 939 0.995 0.077 2 0.063 4.10 5.8 742 0.994 0.074 2 0.056 5.80 26.4 372 0.995 0.065 2 2.0 26.6 9236 0.994 1 refinement PHENIX (1.20.1_4487: ???) data scaling XSCALE phasing Sir2014 Sir2019 phasing AutoSol data reduction XDS N A DNA-stabilized atomically precise silver nanorod with emission at 960 nm 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 4 N N 4 N N metalc 2.306 A DC 1 A O2 DC 1 1_555 A AG 107 I AG AG 1_555 metalc 2.372 A DC 1 A N3 DC 1 1_555 A AG 110 L AG AG 1_555 metalc 2.284 A DC 2 A N3 DC 2 1_555 A AG 102 D AG AG 1_555 metalc 2.632 A DC 2 A O2 DC 2 1_555 A AG 105 G AG AG 1_555 metalc 2.303 A DG 3 A N7 DG 3 1_555 A AG 101 C AG AG 1_555 metalc 2.370 A DC 4 A O2 DC 4 1_555 A AG 104 F AG AG 1_555 metalc 2.285 A DC 4 A N3 DC 4 1_555 A AG 105 G AG AG 1_555 metalc 2.235 A DG 5 A N7 DG 5 1_555 A AG 108 J AG AG 1_555 metalc 2.513 A DG 5 A O6 DG 5 1_555 A AG 110 L AG AG 1_555 metalc 2.495 A DC 6 A O2 DC 6 1_555 A AG 111 M AG AG 1_555 metalc 2.225 A DC 6 A N3 DC 6 1_555 A AG 112 N AG AG 1_555 metalc 2.652 A DG 7 A O6 DG 7 1_555 A AG 113 O AG AG 1_555 metalc 2.312 A DG 7 A N7 DG 7 1_555 A AG 114 P AG AG 1_555 metalc 2.200 A DG 9 A O6 DG 9 1_555 A AG 109 K AG AG 1_555 metalc 2.305 A DG 9 A N1 DG 9 1_555 A AG 111 M AG AG 1_555 metalc 2.480 A DC 10 A O2 DC 10 1_555 A AG 104 F AG AG 1_555 metalc 2.348 A DC 10 A N3 DC 10 1_555 A AG 106 H AG AG 1_555 metalc 2.363 A DC 11 A O2 DC 11 1_555 A AG 103 E AG AG 1_555 metalc 2.441 A DC 11 A N3 DC 11 1_555 A AG 104 F AG AG 1_555 metalc 2.415 A DG 12 A N7 DG 12 1_555 A AG 101 C AG AG 1_555 metalc 2.604 A DC 13 A O2 DC 13 1_555 A AG 102 D AG AG 1_555 metalc 2.313 A DC 13 A N3 DC 13 1_555 A AG 103 E AG AG 1_555 metalc 2.352 A DG 14 A O6 DG 14 1_555 A AG 106 H AG AG 1_555 metalc 2.377 A DG 14 A N1 DG 14 1_555 A AG 107 I AG AG 1_555 metalc 2.345 A DA 15 A N1 DA 15 1_555 A AG 109 K AG AG 1_555 metalc 2.271 A DA 16 A N1 DA 16 1_555 A AG 113 O AG AG 1_555 metalc 2.377 B DC 1 B N3 DC 1 1_555 B AG 106 W AG AG 1_555 metalc 2.314 B DC 1 B O2 DC 1 1_555 B AG 108 Y AG AG 1_555 metalc 2.642 B DC 2 B O2 DC 2 1_555 B AG 110 AA AG AG 1_555 metalc 2.289 B DC 2 B N3 DC 2 1_555 B AG 112 CA AG AG 1_555 metalc 2.305 B DG 3 B N7 DG 3 1_555 B AG 114 EA AG AG 1_555 metalc 2.233 B DC 4 B N3 DC 4 1_555 B AG 110 AA AG AG 1_555 metalc 2.365 B DC 4 B O2 DC 4 1_555 B AG 111 BA AG AG 1_555 metalc 2.470 B DG 5 B O6 DG 5 1_555 B AG 106 W AG AG 1_555 metalc 2.365 B DG 5 B N7 DG 5 1_555 B AG 107 X AG AG 1_555 metalc 2.263 B DC 6 B N3 DC 6 1_555 B AG 102 S AG AG 1_555 metalc 2.530 B DC 6 B O2 DC 6 1_555 B AG 103 T AG AG 1_555 metalc 2.337 B DG 7 B N7 DG 7 1_555 B AG 101 R AG AG 1_555 metalc 2.692 B DG 7 B O6 DG 7 1_555 B AG 104 U AG AG 1_555 metalc 2.324 B DG 9 B N1 DG 9 1_555 B AG 103 T AG AG 1_555 metalc 2.207 B DG 9 B O6 DG 9 1_555 B AG 105 V AG AG 1_555 metalc 2.366 B DC 10 B N3 DC 10 1_555 B AG 109 Z AG AG 1_555 metalc 2.465 B DC 10 B O2 DC 10 1_555 B AG 111 BA AG AG 1_555 metalc 2.406 B DC 11 B N3 DC 11 1_555 B AG 111 BA AG AG 1_555 metalc 2.357 B DC 11 B O2 DC 11 1_555 B AG 113 DA AG AG 1_555 metalc 2.409 B DG 12 B N7 DG 12 1_555 B AG 114 EA AG AG 1_555 metalc 2.593 B DC 13 B O2 DC 13 1_555 B AG 112 CA AG AG 1_555 metalc 2.310 B DC 13 B N3 DC 13 1_555 B AG 113 DA AG AG 1_555 metalc 2.372 B DG 14 B N1 DG 14 1_555 B AG 108 Y AG AG 1_555 metalc 2.354 B DG 14 B O6 DG 14 1_555 B AG 109 Z AG AG 1_555 metalc 2.351 B DA 15 B N1 DA 15 1_555 B AG 105 V AG AG 1_555 metalc 2.269 B DA 16 B N1 DA 16 1_555 B AG 104 U AG AG 1_555 hydrog DC-DC MISPAIR A DC 1 A N3 DC 1 1_555 A DC 4 A N4 DC 4 1_555 hydrog DC-DG PAIR A DC 1 A N4 DC 1 1_555 A DG 5 A O6 DG 5 1_555 hydrog DC-DG PAIR A DC 1 A O2 DC 1 1_555 A DG 14 A N2 DG 14 1_555 hydrog DC-DC MISPAIR A DC 2 A O2 DC 2 1_555 A DC 4 A N4 DC 4 1_555 hydrog DC-DC MISPAIR A DC 4 A O2 DC 4 1_555 A DC 11 A N4 DC 11 1_555 hydrog DG-DG MISPAIR A DG 5 A N7 DG 5 1_555 A DG 9 A N2 DG 9 1_555 hydrog DC-DG PAIR A DC 6 A O2 DC 6 1_555 A DG 9 A N2 DG 9 1_555 hydrog DG-DA MISPAIR A DG 7 A O6 DG 7 1_555 A DA 16 A N6 DA 16 1_555 hydrog DG-DA MISPAIR A DG 9 A O6 DG 9 1_555 A DA 15 A N6 DA 15 1_555 hydrog DC-DG PAIR A DC 10 A N4 DC 10 1_555 A DG 14 A O6 DG 14 1_555 hydrog DC-DC MISPAIR A DC 11 A O2 DC 11 1_555 A DC 13 A N4 DC 13 1_555 hydrog DC-DC MISPAIR B DC 1 B N3 DC 1 1_555 B DC 4 B N4 DC 4 1_555 hydrog DC-DG PAIR B DC 1 B N4 DC 1 1_555 B DG 5 B O6 DG 5 1_555 hydrog DC-DG PAIR B DC 1 B O2 DC 1 1_555 B DG 14 B N2 DG 14 1_555 hydrog DC-DC MISPAIR B DC 2 B O2 DC 2 1_555 B DC 4 B N4 DC 4 1_555 hydrog DC-DC MISPAIR B DC 2 B N4 DC 2 1_555 B DC 13 B O2 DC 13 1_555 hydrog DC-DC MISPAIR B DC 4 B O2 DC 4 1_555 B DC 11 B N4 DC 11 1_555 hydrog DG-DG MISPAIR B DG 5 B N7 DG 5 1_555 B DG 9 B N2 DG 9 1_555 hydrog DC-DG PAIR B DC 6 B O2 DC 6 1_555 B DG 9 B N2 DG 9 1_555 hydrog DG-DA MISPAIR B DG 7 B O6 DG 7 1_555 B DA 16 B N6 DA 16 1_555 hydrog DG-DA MISPAIR B DG 9 B O6 DG 9 1_555 B DA 15 B N6 DA 15 1_555 hydrog DC-DG PAIR B DC 10 B N4 DC 10 1_555 B DG 14 B O6 DG 14 1_555 hydrog DC-DC MISPAIR B DC 11 B O2 DC 11 1_555 B DC 13 B N4 DC 13 1_555 DNA DNA, silver, Ag28, near infrared emission, fluorescence, DNA-AgNC 9KHW PDB 1 1 9KHW 1 16 9KHW 1 16 9KHW A 1 1 16 1 16 9KHW 1 16 9KHW B 1 1 16 4 P 1 21 1