0.009621 0.000000 0.000000 0.000000 0.009621 0.000000 0.000000 0.000000 0.012951 0.00000 0.00000 0.00000 Li, F.D. Yang, L.N. Xie, H.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 103.944 103.944 77.216 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N O N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 S C N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N C N 355 N C N 356 N N N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N S N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N C N 423 N O N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 N C N 438 N O N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N N N 448 S C N 449 N C N 450 N O N 451 R C N 452 N O N 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N N N 465 S C N 466 N C N 467 N O N 468 N C Y 469 N C Y 470 N C Y 471 N C Y 472 N N Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C N 478 N O N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 N C Y 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C Y 501 N C N 502 N O N 503 N O N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N N N 516 S C N 517 N C N 518 N O N 519 N C N 520 N C N 521 N C N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing UK Structure STRUE6 2005 0969-2126 33 1398 1407.e2 10.1016/j.str.2025.05.009 40494351 Structural insights into ZBTB20 action at the AFP promoter. 2025 10.2210/pdb9jzt/pdb pdb_00009jzt 100 1 N PIXEL 2023-10-31 DECTRIS PILATUS3 6M SINGLE WAVELENGTH M x-ray 1 0.97923 1.0 BL19U1 SSRF 0.97923 SYNCHROTRON SSRF BEAMLINE BL19U1 13877.247 Zinc finger and BTB domain-containing protein 20 1 man polymer 4864.165 DNA (5'-D(*CP*TP*TP*CP*CP*TP*TP*AP*CP*GP*TP*TP*GP*AP*AP*G)-3') 1 syn polymer 4931.231 DNA (5'-D(*GP*CP*TP*TP*CP*AP*AP*CP*GP*TP*AP*AP*GP*GP*AP*A)-3') 1 syn polymer 65.409 ZINC ION 4 syn non-polymer 18.015 water 7 nat water Dendritic-derived BTB/POZ zinc finger protein,Zinc finger protein 288 no no GPHMKPYECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSICNKRFTQKSSLNV HMRLHRGEKSYECYICKKKFSHKTLLERHVALHSASNG GPHMKPYECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSICNKRFTQKSSLNV HMRLHRGEKSYECYICKKKFSHKTLLERHVALHSASNG A polypeptide(L) no no (DC)(DT)(DT)(DC)(DC)(DT)(DT)(DA)(DC)(DG)(DT)(DT)(DG)(DA)(DA)(DG) CTTCCTTACGTTGAAG B polydeoxyribonucleotide no no (DG)(DC)(DT)(DT)(DC)(DA)(DA)(DC)(DG)(DT)(DA)(DA)(DG)(DG)(DA)(DA) GCTTCAACGTAAGGAA C polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 1 118 ZBTB20, DPZF, ZNF288 9606 Homo sapiens 562 Escherichia coli Biological sequence 1 4.41 72.08 VAPOR DIFFUSION, HANGING DROP 0.12 M Ethylene glycols, 0.1 M Tris (base), Bicine pH 8.5, 18% Ethylene glycol, PEG 4K 293 -6.935 1 20 B 2 C 16 -1.929 B_DT2:DA16_C 1 -18.414 -0.230 0.542 -0.171 -4.507 1 20 B 3 C 15 5.186 B_DT3:DA15_C 2 -17.065 -0.114 0.551 -0.214 -8.554 1 19 B 4 C 14 1.328 B_DC4:DG14_C 3 -18.344 -0.166 0.261 -0.040 -16.049 1 19 B 5 C 13 6.607 B_DC5:DG13_C 4 -1.124 0.344 0.310 -0.069 -12.734 1 20 B 6 C 12 11.662 B_DT6:DA12_C 5 -16.497 0.632 0.798 0.061 5.098 1 20 B 7 C 11 0.622 B_DT7:DA11_C 6 -4.985 0.122 0.066 -0.281 10.917 1 20 B 8 C 10 7.968 B_DA8:DT10_C 7 -16.430 0.983 0.720 0.151 8.360 1 19 B 9 C 9 3.672 B_DC9:DG9_C 8 -23.597 0.415 0.423 -0.166 -12.043 1 19 B 10 C 8 3.062 B_DG10:DC8_C 9 -23.712 -0.810 0.448 -0.041 -12.657 1 20 B 11 C 7 -7.723 B_DT11:DA7_C 10 -1.335 -0.229 0.384 0.083 -2.582 1 20 B 12 C 6 -4.892 B_DT12:DA6_C 11 -10.070 -0.336 0.387 0.019 -8.597 1 19 B 13 C 5 7.608 B_DG13:DC5_C 12 -9.208 0.259 -0.516 0.021 -1.964 1 20 B 14 C 4 -9.411 B_DA14:DT4_C 13 -11.157 -0.299 0.060 -0.142 11.860 1 20 B 15 C 3 -4.262 B_DA15:DT3_C 14 -13.892 0.683 0.910 -0.421 7.254 1 19 B 16 C 2 4.568 B_DG16:DC2_C 15 -7.158 0.080 0.391 -0.058 3.313 35.882 B B 2 3 -10.136 C C 16 15 3.230 -6.215 0.135 -0.755 BB_DT2DT3:DA15DA16_CC 1 0.743 -1.211 35.350 -0.329 -0.113 3.246 42.001 B B 3 4 -9.416 C C 15 14 3.228 -6.718 -0.124 -0.458 BB_DT3DC4:DG14DA15_CC 2 2.725 -3.819 41.399 0.056 0.455 3.663 37.806 B B 4 5 4.446 C C 14 13 3.592 2.877 1.286 0.466 BB_DC4DC5:DG13DG14_CC 3 1.500 -2.317 37.671 0.307 -1.771 3.370 32.171 B B 5 6 2.392 C C 13 12 3.386 1.324 0.008 -0.086 BB_DC5DT6:DA12DG13_CC 4 -2.420 4.373 32.056 -0.400 -0.462 2.759 29.614 B B 6 7 6.136 C C 12 11 2.886 3.114 0.226 -1.038 BB_DT6DT7:DA11DA12_CC 5 5.342 -10.526 28.975 -2.604 0.543 2.755 33.341 B B 7 8 15.136 C C 11 10 3.136 8.591 -0.084 -1.125 BB_DT7DA8:DT10DA11_CC 6 -0.549 0.967 32.241 -3.269 0.063 3.395 30.712 B B 8 9 -3.930 C C 10 9 3.338 -2.079 -0.022 -1.016 BB_DA8DC9:DG9DT10_CC 7 1.176 -2.223 30.621 -1.497 0.279 3.137 33.525 B B 9 10 13.509 C C 9 8 3.529 7.725 0.254 -1.381 BB_DC9DG10:DC8DG9_CC 8 1.237 -2.163 32.625 -3.706 -0.230 3.308 32.687 B B 10 11 3.056 C C 8 7 3.378 1.719 -1.385 -0.769 BB_DG10DT11:DA7DC8_CC 9 0.610 -1.085 32.637 -1.670 2.569 3.135 35.077 B B 11 12 -12.600 C C 7 6 3.020 -7.538 -0.184 -0.869 BB_DT11DT12:DA6DA7_CC 10 -0.060 0.100 34.282 -0.366 0.297 3.814 39.570 B B 12 13 9.037 C C 6 5 3.581 6.052 1.220 0.680 BB_DT12DG13:DC5DA6_CC 11 8.341 -12.454 38.257 0.187 -0.676 3.479 33.825 B B 13 14 9.564 C C 5 4 3.078 5.439 -1.679 0.400 BB_DG13DA14:DT4DC5_CC 12 -11.314 19.895 31.473 -0.226 0.984 2.808 36.490 B B 14 15 -2.127 C C 4 3 2.840 -1.325 0.137 -1.009 BB_DA14DA15:DT3DT4_CC 13 -6.458 10.366 35.910 -1.452 -0.997 3.578 31.227 B B 15 16 -9.483 C C 3 2 3.520 -5.070 0.544 -0.400 BB_DA15DG16:DC2DT3_CC 14 3.839 -7.179 30.588 0.313 -0.211 repository Initial release 1 0 2025-10-15 China National Natural Science Foundation of China (NSFC) 32371282 lifudong@ustc.edu.cn 0000-0002-9434-3762 Fudong Li principal investigator/group leader N PDBJ Y PDBJ 2024-10-14 REL REL ZN ZN SUBJECT OF INVESTIGATION ZN ZINC ION HOH water 10090 Mus musculus sample 1 16 10090 Mus musculus sample 1 16 Y N AlphaFold in silico model ZN 1 4 ZN ZN 701 A ZN 2 4 ZN ZN 702 A ZN 3 4 ZN ZN 703 A ZN 4 4 ZN ZN 704 A HOH 5 5 HOH HOH 801 A HOH 6 5 HOH HOH 802 A HOH 2 5 HOH HOH 101 B HOH 3 5 HOH HOH 102 B HOH 8 5 HOH HOH 101 C HOH 1 5 HOH HOH 102 C HOH 4 5 HOH HOH 103 C n 1 572 A n 2 573 A n 3 574 A n 4 575 A n 5 576 A PRO 577 n 6 PRO 577 A TYR 578 n 7 TYR 578 A GLU 579 n 8 GLU 579 A CYS 580 n 9 CYS 580 A THR 581 n 10 THR 581 A LEU 582 n 11 LEU 582 A CYS 583 n 12 CYS 583 A ASN 584 n 13 ASN 584 A LYS 585 n 14 LYS 585 A THR 586 n 15 THR 586 A PHE 587 n 16 PHE 587 A THR 588 n 17 THR 588 A ALA 589 n 18 ALA 589 A LYS 590 n 19 LYS 590 A GLN 591 n 20 GLN 591 A ASN 592 n 21 ASN 592 A TYR 593 n 22 TYR 593 A VAL 594 n 23 VAL 594 A LYS 595 n 24 LYS 595 A HIS 596 n 25 HIS 596 A MET 597 n 26 MET 597 A PHE 598 n 27 PHE 598 A VAL 599 n 28 VAL 599 A HIS 600 n 29 HIS 600 A THR 601 n 30 THR 601 A GLY 602 n 31 GLY 602 A GLU 603 n 32 GLU 603 A LYS 604 n 33 LYS 604 A PRO 605 n 34 PRO 605 A HIS 606 n 35 HIS 606 A GLN 607 n 36 GLN 607 A CYS 608 n 37 CYS 608 A SER 609 n 38 SER 609 A ILE 610 n 39 ILE 610 A CYS 611 n 40 CYS 611 A TRP 612 n 41 TRP 612 A ARG 613 n 42 ARG 613 A SER 614 n 43 SER 614 A PHE 615 n 44 PHE 615 A SER 616 n 45 SER 616 A LEU 617 n 46 LEU 617 A LYS 618 n 47 LYS 618 A ASP 619 n 48 ASP 619 A TYR 620 n 49 TYR 620 A LEU 621 n 50 LEU 621 A ILE 622 n 51 ILE 622 A LYS 623 n 52 LYS 623 A HIS 624 n 53 HIS 624 A MET 625 n 54 MET 625 A VAL 626 n 55 VAL 626 A THR 627 n 56 THR 627 A HIS 628 n 57 HIS 628 A THR 629 n 58 THR 629 A GLY 630 n 59 GLY 630 A VAL 631 n 60 VAL 631 A ARG 632 n 61 ARG 632 A ALA 633 n 62 ALA 633 A TYR 634 n 63 TYR 634 A GLN 635 n 64 GLN 635 A CYS 636 n 65 CYS 636 A SER 637 n 66 SER 637 A ILE 638 n 67 ILE 638 A CYS 639 n 68 CYS 639 A ASN 640 n 69 ASN 640 A LYS 641 n 70 LYS 641 A ARG 642 n 71 ARG 642 A PHE 643 n 72 PHE 643 A THR 644 n 73 THR 644 A GLN 645 n 74 GLN 645 A LYS 646 n 75 LYS 646 A SER 647 n 76 SER 647 A SER 648 n 77 SER 648 A LEU 649 n 78 LEU 649 A ASN 650 n 79 ASN 650 A VAL 651 n 80 VAL 651 A HIS 652 n 81 HIS 652 A MET 653 n 82 MET 653 A ARG 654 n 83 ARG 654 A LEU 655 n 84 LEU 655 A HIS 656 n 85 HIS 656 A ARG 657 n 86 ARG 657 A GLY 658 n 87 GLY 658 A GLU 659 n 88 GLU 659 A LYS 660 n 89 LYS 660 A SER 661 n 90 SER 661 A TYR 662 n 91 TYR 662 A GLU 663 n 92 GLU 663 A CYS 664 n 93 CYS 664 A TYR 665 n 94 TYR 665 A ILE 666 n 95 ILE 666 A CYS 667 n 96 CYS 667 A LYS 668 n 97 LYS 668 A LYS 669 n 98 LYS 669 A LYS 670 n 99 LYS 670 A PHE 671 n 100 PHE 671 A SER 672 n 101 SER 672 A HIS 673 n 102 HIS 673 A LYS 674 n 103 LYS 674 A THR 675 n 104 THR 675 A LEU 676 n 105 LEU 676 A LEU 677 n 106 LEU 677 A GLU 678 n 107 GLU 678 A ARG 679 n 108 ARG 679 A HIS 680 n 109 HIS 680 A VAL 681 n 110 VAL 681 A ALA 682 n 111 ALA 682 A LEU 683 n 112 LEU 683 A HIS 684 n 113 HIS 684 A SER 685 n 114 SER 685 A ALA 686 n 115 ALA 686 A SER 687 n 116 SER 687 A ASN 688 n 117 ASN 688 A n 118 689 A DC 1 n 1 DC 1 B DT 2 n 2 DT 2 B DT 3 n 3 DT 3 B DC 4 n 4 DC 4 B DC 5 n 5 DC 5 B DT 6 n 6 DT 6 B DT 7 n 7 DT 7 B DA 8 n 8 DA 8 B DC 9 n 9 DC 9 B DG 10 n 10 DG 10 B DT 11 n 11 DT 11 B DT 12 n 12 DT 12 B DG 13 n 13 DG 13 B DA 14 n 14 DA 14 B DA 15 n 15 DA 15 B DG 16 n 16 DG 16 B DG 1 n 1 DG 1 C DC 2 n 2 DC 2 C DT 3 n 3 DT 3 C DT 4 n 4 DT 4 C DC 5 n 5 DC 5 C DA 6 n 6 DA 6 C DA 7 n 7 DA 7 C DC 8 n 8 DC 8 C DG 9 n 9 DG 9 C DT 10 n 10 DT 10 C DA 11 n 11 DA 11 C DA 12 n 12 DA 12 C DG 13 n 13 DG 13 C DG 14 n 14 DG 14 C DA 15 n 15 DA 15 C DA 16 n 16 DA 16 C -0.2337 -0.2182 -0.4501 0.3787 -0.8713 -0.0822 0.0845 -0.0517 -0.0063 0.1065 -0.1474 0.0097 -0.0023 0.0147 -0.0072 0.4826 -0.0406 -0.0388 0.7478 -0.0686 0.5352 refined -29.5044 -27.1313 -13.4251 X-RAY DIFFRACTION 0.2136 0.1711 0.2906 0.7081 -0.1371 0.4884 -0.4381 -0.7847 -0.5240 -0.0136 0.1496 -0.2651 0.1088 0.0533 0.0002 0.6449 0.0107 0.0690 1.3530 0.0215 0.9474 refined -18.6158 -25.0254 -18.9166 X-RAY DIFFRACTION 0.0237 -0.0432 0.0853 -0.0501 0.0080 0.8804 -0.4517 -1.0339 0.1339 0.3419 0.1619 0.0398 0.1145 0.1379 0.0002 0.6086 0.0770 0.0056 1.3336 0.0212 0.8873 refined -16.8047 -22.9115 -18.4898 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 (chain 'A' and resid 577 through 688) X-RAY DIFFRACTION 2 (chain 'B' and resid 1 through 16) X-RAY DIFFRACTION 3 (chain 'C' and resid 1 through 16) author_and_software_defined_assembly PISA 3 trimeric gel filtration 4040 -37 12710 A CYS 580 A SG CYS 9 1_555 A ZN 702 E ZN ZN 1_555 A CYS 583 A SG CYS 12 1_555 110.7 A CYS 580 A SG CYS 9 1_555 A ZN 702 E ZN ZN 1_555 A HIS 596 A NE2 HIS 25 1_555 98.5 A CYS 583 A SG CYS 12 1_555 A ZN 702 E ZN ZN 1_555 A HIS 596 A NE2 HIS 25 1_555 96.1 A CYS 580 A SG CYS 9 1_555 A ZN 702 E ZN ZN 1_555 A HIS 600 A NE2 HIS 29 1_555 106.5 A CYS 583 A SG CYS 12 1_555 A ZN 702 E ZN ZN 1_555 A HIS 600 A NE2 HIS 29 1_555 137.4 A HIS 596 A NE2 HIS 25 1_555 A ZN 702 E ZN ZN 1_555 A HIS 600 A NE2 HIS 29 1_555 98.3 A CYS 608 A SG CYS 37 1_555 A ZN 701 D ZN ZN 1_555 A CYS 611 A SG CYS 40 1_555 117.1 A CYS 608 A SG CYS 37 1_555 A ZN 701 D ZN ZN 1_555 A HIS 624 A NE2 HIS 53 1_555 112.8 A CYS 611 A SG CYS 40 1_555 A ZN 701 D ZN ZN 1_555 A HIS 624 A NE2 HIS 53 1_555 98.6 A CYS 608 A SG CYS 37 1_555 A ZN 701 D ZN ZN 1_555 A HIS 628 A NE2 HIS 57 1_555 96.7 A CYS 611 A SG CYS 40 1_555 A ZN 701 D ZN ZN 1_555 A HIS 628 A NE2 HIS 57 1_555 131.9 A HIS 624 A NE2 HIS 53 1_555 A ZN 701 D ZN ZN 1_555 A HIS 628 A NE2 HIS 57 1_555 98.5 A CYS 636 A SG CYS 65 1_555 A ZN 703 F ZN ZN 1_555 A CYS 639 A SG CYS 68 1_555 115.3 A CYS 636 A SG CYS 65 1_555 A ZN 703 F ZN ZN 1_555 A HIS 652 A NE2 HIS 81 1_555 120.3 A CYS 639 A SG CYS 68 1_555 A ZN 703 F ZN ZN 1_555 A HIS 652 A NE2 HIS 81 1_555 97.1 A CYS 636 A SG CYS 65 1_555 A ZN 703 F ZN ZN 1_555 A HIS 656 A NE2 HIS 85 1_555 111.8 A CYS 639 A SG CYS 68 1_555 A ZN 703 F ZN ZN 1_555 A HIS 656 A NE2 HIS 85 1_555 108.9 A HIS 652 A NE2 HIS 81 1_555 A ZN 703 F ZN ZN 1_555 A HIS 656 A NE2 HIS 85 1_555 101.7 A CYS 664 A SG CYS 93 1_555 A ZN 704 G ZN ZN 1_555 A CYS 667 A SG CYS 96 1_555 112.0 A CYS 664 A SG CYS 93 1_555 A ZN 704 G ZN ZN 1_555 A HIS 680 A NE2 HIS 109 1_555 107.7 A CYS 667 A SG CYS 96 1_555 A ZN 704 G ZN ZN 1_555 A HIS 680 A NE2 HIS 109 1_555 90.6 A CYS 664 A SG CYS 93 1_555 A ZN 704 G ZN ZN 1_555 A HIS 684 A NE2 HIS 113 1_555 117.9 A CYS 667 A SG CYS 96 1_555 A ZN 704 G ZN ZN 1_555 A HIS 684 A NE2 HIS 113 1_555 122.5 A HIS 680 A NE2 HIS 109 1_555 A ZN 704 G ZN ZN 1_555 A HIS 684 A NE2 HIS 113 1_555 99.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 578 A N TYR 7 A O PHE 587 A O PHE 16 A N HIS 606 A N HIS 35 A O PHE 615 A O PHE 44 A N TYR 634 A N TYR 63 A O PHE 643 A O PHE 72 A N TYR 662 A N TYR 91 A O PHE 671 A O PHE 100 1 A GLY 572 A GLY 1 1 Y 1 A PRO 573 A PRO 2 1 Y 1 A HIS 574 A HIS 3 1 Y 1 A MET 575 A MET 4 1 Y 1 A LYS 576 A LYS 5 1 Y 1 A GLY 689 A GLY 118 1 Y 1 A LEU 582 -75.97 -76.29 1 A ASN 584 53.49 76.58 1 A ILE 638 -95.18 -68.99 1 A ILE 666 -107.16 -70.95 0.2489 0.2046 0.2065 3.10 53.24 395 8055 4.90 99.46 0.42 1 FREE R-VALUE 1.34 MOLECULAR REPLACEMENT 23.72 0.90 1.10 AlphaFold ML FLAT BULK SOLVENT MODEL 3.10 53.24 7 1586 4 650 925 0.003 1677 0.507 2391 21.891 665 0.031 261 0.002 187 0.3518 0.2824 3.55 137 2451 99.00 0.2485 0.2242 4.47 131 2539 100.00 0.2073 0.1672 53.24 127 2670 99.00 3.10 61.98 9JZT 8098 0.997 0.320 0.078 0.330 0.99 1 9.7 16.7 99.7 1.940 3.10 3.31 24682 1415 0.980 0.467 1.997 0.96 1 1.9 17.4 99.3 refinement PHENIX (1.20.1_4487: ???) data scaling Aimless data reduction XDS phasing PHASER N Crystal structure of ZBTB20 in complex with mouse AFP promoter 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N 5 N N 5 N N 5 N N A ALA 589 A ALA 18 HELX_P A THR 601 A THR 30 1 AA1 13 A LEU 617 A LEU 46 HELX_P A MET 625 A MET 54 1 AA2 9 A MET 625 A MET 54 HELX_P A GLY 630 A GLY 59 1 AA3 6 A GLN 645 A GLN 74 HELX_P A ARG 654 A ARG 83 1 AA4 10 A HIS 673 A HIS 102 HELX_P A ASN 688 A ASN 117 1 AA5 16 metalc 2.304 A CYS 580 A SG CYS 9 1_555 A ZN 702 E ZN ZN 1_555 metalc 2.300 A CYS 583 A SG CYS 12 1_555 A ZN 702 E ZN ZN 1_555 metalc 2.044 A HIS 596 A NE2 HIS 25 1_555 A ZN 702 E ZN ZN 1_555 metalc 2.042 A HIS 600 A NE2 HIS 29 1_555 A ZN 702 E ZN ZN 1_555 metalc 2.306 A CYS 608 A SG CYS 37 1_555 A ZN 701 D ZN ZN 1_555 metalc 2.306 A CYS 611 A SG CYS 40 1_555 A ZN 701 D ZN ZN 1_555 metalc 2.078 A HIS 624 A NE2 HIS 53 1_555 A ZN 701 D ZN ZN 1_555 metalc 2.005 A HIS 628 A NE2 HIS 57 1_555 A ZN 701 D ZN ZN 1_555 metalc 2.315 A CYS 636 A SG CYS 65 1_555 A ZN 703 F ZN ZN 1_555 metalc 2.298 A CYS 639 A SG CYS 68 1_555 A ZN 703 F ZN ZN 1_555 metalc 2.048 A HIS 652 A NE2 HIS 81 1_555 A ZN 703 F ZN ZN 1_555 metalc 2.037 A HIS 656 A NE2 HIS 85 1_555 A ZN 703 F ZN ZN 1_555 metalc 2.310 A CYS 664 A SG CYS 93 1_555 A ZN 704 G ZN ZN 1_555 metalc 2.303 A CYS 667 A SG CYS 96 1_555 A ZN 704 G ZN ZN 1_555 metalc 2.060 A HIS 680 A NE2 HIS 109 1_555 A ZN 704 G ZN ZN 1_555 metalc 2.054 A HIS 684 A NE2 HIS 113 1_555 A ZN 704 G ZN ZN 1_555 hydrog WATSON-CRICK B DT 2 B N3 DT 2 1_555 C DA 16 C N1 DA 16 1_555 hydrog WATSON-CRICK B DT 2 B O4 DT 2 1_555 C DA 16 C N6 DA 16 1_555 hydrog WATSON-CRICK B DT 3 B N3 DT 3 1_555 C DA 15 C N1 DA 15 1_555 hydrog WATSON-CRICK B DT 3 B O4 DT 3 1_555 C DA 15 C N6 DA 15 1_555 hydrog WATSON-CRICK B DC 4 B N3 DC 4 1_555 C DG 14 C N1 DG 14 1_555 hydrog WATSON-CRICK B DC 4 B N4 DC 4 1_555 C DG 14 C O6 DG 14 1_555 hydrog WATSON-CRICK B DC 4 B O2 DC 4 1_555 C DG 14 C N2 DG 14 1_555 hydrog WATSON-CRICK B DC 5 B N3 DC 5 1_555 C DG 13 C N1 DG 13 1_555 hydrog WATSON-CRICK B DC 5 B N4 DC 5 1_555 C DG 13 C O6 DG 13 1_555 hydrog WATSON-CRICK B DC 5 B O2 DC 5 1_555 C DG 13 C N2 DG 13 1_555 hydrog WATSON-CRICK B DT 6 B N3 DT 6 1_555 C DA 12 C N1 DA 12 1_555 hydrog WATSON-CRICK B DT 6 B O4 DT 6 1_555 C DA 12 C N6 DA 12 1_555 hydrog WATSON-CRICK B DT 7 B N3 DT 7 1_555 C DA 11 C N1 DA 11 1_555 hydrog WATSON-CRICK B DT 7 B O4 DT 7 1_555 C DA 11 C N6 DA 11 1_555 hydrog WATSON-CRICK B DA 8 B N1 DA 8 1_555 C DT 10 C N3 DT 10 1_555 hydrog WATSON-CRICK B DA 8 B N6 DA 8 1_555 C DT 10 C O4 DT 10 1_555 hydrog WATSON-CRICK B DC 9 B N3 DC 9 1_555 C DG 9 C N1 DG 9 1_555 hydrog WATSON-CRICK B DC 9 B N4 DC 9 1_555 C DG 9 C O6 DG 9 1_555 hydrog WATSON-CRICK B DC 9 B O2 DC 9 1_555 C DG 9 C N2 DG 9 1_555 hydrog WATSON-CRICK B DG 10 B N1 DG 10 1_555 C DC 8 C N3 DC 8 1_555 hydrog WATSON-CRICK B DG 10 B N2 DG 10 1_555 C DC 8 C O2 DC 8 1_555 hydrog WATSON-CRICK B DG 10 B O6 DG 10 1_555 C DC 8 C N4 DC 8 1_555 hydrog WATSON-CRICK B DT 11 B N3 DT 11 1_555 C DA 7 C N1 DA 7 1_555 hydrog WATSON-CRICK B DT 11 B O4 DT 11 1_555 C DA 7 C N6 DA 7 1_555 hydrog WATSON-CRICK B DT 12 B N3 DT 12 1_555 C DA 6 C N1 DA 6 1_555 hydrog WATSON-CRICK B DT 12 B O4 DT 12 1_555 C DA 6 C N6 DA 6 1_555 hydrog WATSON-CRICK B DG 13 B N1 DG 13 1_555 C DC 5 C N3 DC 5 1_555 hydrog WATSON-CRICK B DG 13 B N2 DG 13 1_555 C DC 5 C O2 DC 5 1_555 hydrog WATSON-CRICK B DG 13 B O6 DG 13 1_555 C DC 5 C N4 DC 5 1_555 hydrog WATSON-CRICK B DA 14 B N1 DA 14 1_555 C DT 4 C N3 DT 4 1_555 hydrog WATSON-CRICK B DA 14 B N6 DA 14 1_555 C DT 4 C O4 DT 4 1_555 hydrog WATSON-CRICK B DA 15 B N1 DA 15 1_555 C DT 3 C N3 DT 3 1_555 hydrog WATSON-CRICK B DA 15 B N6 DA 15 1_555 C DT 3 C O4 DT 3 1_555 hydrog WATSON-CRICK B DG 16 B N1 DG 16 1_555 C DC 2 C N3 DC 2 1_555 hydrog WATSON-CRICK B DG 16 B N2 DG 16 1_555 C DC 2 C O2 DC 2 1_555 hydrog WATSON-CRICK B DG 16 B O6 DG 16 1_555 C DC 2 C N4 DC 2 1_555 TRANSCRIPTION Transcription factor, TRANSCRIPTION ZBT20_HUMAN UNP 1 576 Q9HC78 KPYECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSICNKRFTQKSSLNVHMRL HRGEKSYECYICKKKFSHKTLLERHVALHSASNG 9JZT PDB 2 1 9JZT 9JZT PDB 3 1 9JZT 576 689 9JZT 576 689 Q9HC78 A 1 5 118 1 16 9JZT 1 16 9JZT B 2 1 16 1 16 9JZT 1 16 9JZT C 3 1 16 1 expression tag GLY 572 9JZT A Q9HC78 UNP 1 1 expression tag PRO 573 9JZT A Q9HC78 UNP 2 1 expression tag HIS 574 9JZT A Q9HC78 UNP 3 1 expression tag MET 575 9JZT A Q9HC78 UNP 4 2 2 2 2 anti-parallel anti-parallel anti-parallel anti-parallel A TYR 578 A TYR 7 A GLU 579 A GLU 8 A THR 586 A THR 15 A PHE 587 A PHE 16 A HIS 606 A HIS 35 A GLN 607 A GLN 36 A SER 614 A SER 43 A PHE 615 A PHE 44 A TYR 634 A TYR 63 A GLN 635 A GLN 64 A ARG 642 A ARG 71 A PHE 643 A PHE 72 A TYR 662 A TYR 91 A GLU 663 A GLU 92 A LYS 670 A LYS 99 A PHE 671 A PHE 100 94 P 42 21 2