1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 0000-0002-2934-9906 Wang, K.B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C N 120 N N N 121 N C N 122 N O N 123 N N N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing To Be Published 0353 BLM G-quadruplex stabilizers synergize with PARP inhibitor to kill BRCA wild-type colon cancer cells 0000-0002-2706-3066 0000-0001-9712-2618 0000-0002-2934-9906 10.2210/pdb9jo0/pdb pdb_00009jo0 10.13018/BMR36694 6698.320 DNA (5'-D(*TP*GP*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*GP*AP*GP*GP*GP*AP*AP*T)-3') 1 syn polymer no no (DT)(DG)(DA)(DG)(DG)(DG)(DA)(DG)(DG)(DG)(DC)(DG)(DG)(DG)(DA)(DG)(DG)(DG)(DA)(DA) (DT) TGAGGGAGGGCGGGAGGGAAT X polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n 4.396 3 6 X 4 X 16 91.321 X_DG4:DG16_X 1 -0.595 -1.833 0.039 -3.277 -2.687 3 6 X 5 X 17 90.213 X_DG5:DG17_X 2 -0.797 -1.780 0.250 -3.323 3.849 3 6 X 9 X 13 -90.458 X_DG9:DG13_X 3 -5.150 1.625 -0.175 3.416 2.379 3 6 X 8 X 12 -89.656 X_DG8:DG12_X 4 5.240 1.791 -0.106 3.352 3.271 24.508 X X 4 5 2.101 X X 16 17 3.313 0.891 -0.405 -0.544 XX_DG4DG5:DG17DG16_XX 1 1.028 -2.423 24.470 -1.560 1.274 -0.127 178.843 X X 5 9 4.553 X X 17 13 -0.125 9.106 -1.705 -3.425 XX_DG5DG9:DG13DG17_XX 2 -0.210 0.105 178.839 -1.713 0.853 -3.208 -23.851 X X 9 8 2.689 X X 13 12 -3.256 -1.111 0.494 0.546 XX_DG9DG8:DG12DG13_XX 3 -0.845 -2.045 -23.811 -1.681 1.469 repository Initial release 1 0 2026-04-01 China National Natural Science Foundation of China (NSFC) 82322065 wangkaibo2014@163.com 0000-0002-2934-9906 Kaibo Wang principal investigator/group leader Solution structure of free BLM promoter G-quadruplex N PDBJ Y PDBC 2024-09-24 REL REL 9606 Homo sapiens sample 1 21 N structures with the lowest energy 100 10 isotropic 1 2D 1H-1H NOESY isotropic 1 2D 1H-1H NOESY isotropic 1 2D 1H-1H NOESY isotropic 1 2D 1H-13C HSQC isotropic 1 2D DQF-COSY 1.62 mM None 1.93 mM None 50 mM Conditions_1 7.0 pH 1 atm 288 K 50 mM Conditions_2 7.0 pH 1 atm 298 K 50 mM Conditions_3 7.0 pH 1 atm 308 K molecular dynamics 1 lowest energy 1.62 mM None BLM_Pu21T, 90% H2O/10% D2O none 90% H2O/10% D2O solution 1.93 mM None BLM_Pu21T, 90% H2O/10% D2O none 90% H2O/10% D2O solution Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman structure calculation Amber Bruker Biospin collection TopSpin Schwieters, Kuszewski, Tjandra and Clore structure calculation X-PLOR NIH Woonghee Lee peak picking NMRFAM-SPARKY QCI cryoprobe 600 Bruker AVANCE II DT 1 n 1 DT 1 X DG 2 n 2 DG 2 X DA 3 n 3 DA 3 X DG 4 n 4 DG 4 X DG 5 n 5 DG 5 X DG 6 n 6 DG 6 X DA 7 n 7 DA 7 X DG 8 n 8 DG 8 X DG 9 n 9 DG 9 X DG 10 n 10 DG 10 X DC 11 n 11 DC 11 X DG 12 n 12 DG 12 X DG 13 n 13 DG 13 X DG 14 n 14 DG 14 X DA 15 n 15 DA 15 X DG 16 n 16 DG 16 X DG 17 n 17 DG 17 X DG 18 n 18 DG 18 X DA 19 n 19 DA 19 X DA 20 n 20 DA 20 X DT 21 n 21 DT 21 X author_and_software_defined_assembly 1 monomeric not applicable NMR Distance Restraints 1.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 1.0 1_555 x,y,z identity operation 0.0 0.0 0.0 7 X DG 4 0.058 SIDE CHAIN 1 1.88 0.30 108.30 110.18 X X X O4' C1' N1 DT DT DT 1 1 1 N 1 -3.61 0.60 122.90 119.29 X X X C6 C5 C7 DT DT DT 1 1 1 N 1 3.78 0.30 108.30 112.08 X X X O4' C1' N9 DG DG DG 2 2 2 N 1 3.31 0.30 108.30 111.61 X X X O4' C1' N9 DA DA DA 3 3 3 N 1 -3.28 0.50 117.00 113.72 X X X C4 C5 C6 DA DA DA 3 3 3 N 1 3.60 0.50 117.70 121.30 X X X C5 C6 N1 DA DA DA 3 3 3 N 1 -5.26 0.60 118.60 113.34 X X X N1 C6 N6 DA DA DA 3 3 3 N 1 2.42 0.30 108.30 110.72 X X X O4' C1' N9 DG DG DG 4 4 4 N 1 2.48 0.30 108.30 110.78 X X X O4' C1' N9 DG DG DG 6 6 6 N 1 -3.33 0.50 117.00 113.67 X X X C4 C5 C6 DA DA DA 7 7 7 N 1 3.80 0.50 117.70 121.50 X X X C5 C6 N1 DA DA DA 7 7 7 N 1 -5.58 0.60 118.60 113.02 X X X N1 C6 N6 DA DA DA 7 7 7 N 1 2.64 0.30 108.30 110.94 X X X O4' C1' N9 DG DG DG 9 9 9 N 1 2.71 0.30 108.30 111.01 X X X O4' C1' N9 DG DG DG 10 10 10 N 1 -4.69 0.70 121.90 117.21 X X X N3 C2 O2 DC DC DC 11 11 11 N 1 2.42 0.30 108.30 110.72 X X X O4' C1' N9 DG DG DG 12 12 12 N 1 3.28 0.30 108.30 111.58 X X X O4' C1' N9 DG DG DG 13 13 13 N 1 2.76 0.30 108.30 111.06 X X X O4' C1' N9 DG DG DG 14 14 14 N 1 -3.25 0.50 117.00 113.75 X X X C4 C5 C6 DA DA DA 15 15 15 N 1 3.72 0.50 117.70 121.42 X X X C5 C6 N1 DA DA DA 15 15 15 N 1 -5.52 0.60 118.60 113.08 X X X N1 C6 N6 DA DA DA 15 15 15 N 1 1.92 0.30 108.30 110.22 X X X O4' C1' N9 DG DG DG 17 17 17 N 1 2.65 0.30 108.30 110.95 X X X O4' C1' N9 DG DG DG 18 18 18 N 1 2.73 0.30 108.30 111.03 X X X O4' C1' N9 DA DA DA 19 19 19 N 1 -3.27 0.50 117.00 113.73 X X X C4 C5 C6 DA DA DA 19 19 19 N 1 3.77 0.50 117.70 121.47 X X X C5 C6 N1 DA DA DA 19 19 19 N 1 -5.34 0.60 118.60 113.26 X X X N1 C6 N6 DA DA DA 19 19 19 N 1 -3.41 0.50 117.00 113.59 X X X C4 C5 C6 DA DA DA 20 20 20 N 1 3.68 0.50 117.70 121.38 X X X C5 C6 N1 DA DA DA 20 20 20 N 1 -5.47 0.60 118.60 113.13 X X X N1 C6 N6 DA DA DA 20 20 20 N 1 5.74 0.30 108.30 114.04 X X X O4' C1' N1 DT DT DT 21 21 21 N 2 2.35 0.30 108.30 110.65 X X X O4' C1' N1 DT DT DT 1 1 1 N 2 3.42 0.30 108.30 111.72 X X X O4' C1' N9 DG DG DG 2 2 2 N 2 2.31 0.30 108.30 110.61 X X X O4' C1' N9 DA DA DA 3 3 3 N 2 -3.31 0.50 117.00 113.69 X X X C4 C5 C6 DA DA DA 3 3 3 N 2 3.66 0.50 117.70 121.36 X X X C5 C6 N1 DA DA DA 3 3 3 N 2 -5.34 0.60 118.60 113.26 X X X N1 C6 N6 DA DA DA 3 3 3 N 2 2.52 0.30 108.30 110.82 X X X O4' C1' N9 DG DG DG 4 4 4 N 2 2.12 0.30 108.30 110.42 X X X O4' C1' N9 DG DG DG 6 6 6 N 2 -3.33 0.50 117.00 113.67 X X X C4 C5 C6 DA DA DA 7 7 7 N 2 3.79 0.50 117.70 121.49 X X X C5 C6 N1 DA DA DA 7 7 7 N 2 -5.75 0.60 118.60 112.85 X X X N1 C6 N6 DA DA DA 7 7 7 N 2 2.12 0.30 108.30 110.42 X X X O4' C1' N9 DG DG DG 9 9 9 N 2 2.32 0.30 108.30 110.62 X X X O4' C1' N9 DG DG DG 10 10 10 N 2 2.22 0.30 108.30 110.52 X X X O4' C1' N1 DC DC DC 11 11 11 N 2 -4.84 0.70 121.90 117.06 X X X N3 C2 O2 DC DC DC 11 11 11 N 2 2.99 0.30 108.30 111.29 X X X O4' C1' N9 DG DG DG 13 13 13 N 2 2.64 0.30 108.30 110.94 X X X O4' C1' N9 DG DG DG 14 14 14 N 2 -3.20 0.50 117.00 113.80 X X X C4 C5 C6 DA DA DA 15 15 15 N 2 3.74 0.50 117.70 121.44 X X X C5 C6 N1 DA DA DA 15 15 15 N 2 -5.55 0.60 118.60 113.05 X X X N1 C6 N6 DA DA DA 15 15 15 N 2 2.80 0.30 108.30 111.10 X X X O4' C1' N9 DG DG DG 17 17 17 N 2 2.94 0.30 108.30 111.24 X X X O4' C1' N9 DG DG DG 18 18 18 N 2 2.61 0.30 108.30 110.91 X X X O4' C1' N9 DA DA DA 19 19 19 N 2 -3.24 0.50 117.00 113.76 X X X C4 C5 C6 DA DA DA 19 19 19 N 2 3.71 0.50 117.70 121.41 X X X C5 C6 N1 DA DA DA 19 19 19 N 2 -5.33 0.60 118.60 113.27 X X X N1 C6 N6 DA DA DA 19 19 19 N 2 -3.43 0.50 117.00 113.57 X X X C4 C5 C6 DA DA DA 20 20 20 N 2 3.70 0.50 117.70 121.40 X X X C5 C6 N1 DA DA DA 20 20 20 N 2 -5.55 0.60 118.60 113.05 X X X N1 C6 N6 DA DA DA 20 20 20 N 2 5.83 0.30 108.30 114.13 X X X O4' C1' N1 DT DT DT 21 21 21 N 3 2.64 0.30 108.30 110.94 X X X O4' C1' N1 DT DT DT 1 1 1 N 3 -3.76 0.60 122.90 119.14 X X X C6 C5 C7 DT DT DT 1 1 1 N 3 2.79 0.30 108.30 111.09 X X X O4' C1' N9 DG DG DG 2 2 2 N 3 2.65 0.30 108.30 110.95 X X X O4' C1' N9 DA DA DA 3 3 3 N 3 -3.38 0.50 117.00 113.62 X X X C4 C5 C6 DA DA DA 3 3 3 N 3 3.53 0.50 117.70 121.23 X X X C5 C6 N1 DA DA DA 3 3 3 N 3 -5.41 0.60 118.60 113.19 X X X N1 C6 N6 DA DA DA 3 3 3 N 3 2.22 0.30 108.30 110.52 X X X O4' C1' N9 DG DG DG 6 6 6 N 3 -3.41 0.50 117.00 113.59 X X X C4 C5 C6 DA DA DA 7 7 7 N 3 3.72 0.50 117.70 121.42 X X X C5 C6 N1 DA DA DA 7 7 7 N 3 -5.54 0.60 118.60 113.06 X X X N1 C6 N6 DA DA DA 7 7 7 N 3 2.02 0.30 108.30 110.32 X X X O4' C1' N9 DG DG DG 8 8 8 N 3 3.74 0.30 108.30 112.04 X X X O4' C1' N9 DG DG DG 9 9 9 N 3 2.77 0.30 108.30 111.07 X X X O4' C1' N9 DG DG DG 10 10 10 N 3 -4.76 0.70 121.90 117.14 X X X N3 C2 O2 DC DC DC 11 11 11 N 3 1.82 0.30 108.30 110.12 X X X O4' C1' N9 DG DG DG 12 12 12 N 3 3.46 0.30 108.30 111.76 X X X O4' C1' N9 DG DG DG 13 13 13 N 3 2.52 0.30 108.30 110.82 X X X O4' C1' N9 DG DG DG 14 14 14 N 3 -3.31 0.50 117.00 113.69 X X X C4 C5 C6 DA DA DA 15 15 15 N 3 3.78 0.50 117.70 121.48 X X X C5 C6 N1 DA DA DA 15 15 15 N 3 -5.57 0.60 118.60 113.03 X X X N1 C6 N6 DA DA DA 15 15 15 N 3 2.59 0.30 108.30 110.89 X X X O4' C1' N9 DG DG DG 18 18 18 N 3 2.28 0.30 108.30 110.58 X X X O4' C1' N9 DA DA DA 19 19 19 N 3 -3.38 0.50 117.00 113.62 X X X C4 C5 C6 DA DA DA 19 19 19 N 3 3.83 0.50 117.70 121.53 X X X C5 C6 N1 DA DA DA 19 19 19 N 3 -5.37 0.60 118.60 113.23 X X X N1 C6 N6 DA DA DA 19 19 19 N 3 -3.46 0.50 117.00 113.54 X X X C4 C5 C6 DA DA DA 20 20 20 N 3 3.81 0.50 117.70 121.51 X X X C5 C6 N1 DA DA DA 20 20 20 N 3 -5.51 0.60 118.60 113.09 X X X N1 C6 N6 DA DA DA 20 20 20 N 3 6.15 0.30 108.30 114.45 X X X O4' C1' N1 DT DT DT 21 21 21 N 4 2.10 0.30 108.30 110.40 X X X O4' C1' N1 DT DT DT 1 1 1 N 4 3.58 0.30 108.30 111.88 X X X O4' C1' N9 DG DG DG 2 2 2 N 4 2.54 0.30 108.30 110.84 X X X O4' C1' N9 DA DA DA 3 3 3 N 4 -3.27 0.50 117.00 113.73 X X X C4 C5 C6 DA DA DA 3 3 3 N 4 3.58 0.50 117.70 121.28 X X X C5 C6 N1 DA DA DA 3 3 3 N 4 -5.29 0.60 118.60 113.31 X X X N1 C6 N6 DA DA DA 3 3 3 N 4 2.11 0.30 108.30 110.41 X X X O4' C1' N9 DG DG DG 4 4 4 N 4 -3.24 0.50 117.00 113.76 X X X C4 C5 C6 DA DA DA 7 7 7 N 4 3.70 0.50 117.70 121.40 X X X C5 C6 N1 DA DA DA 7 7 7 N 4 -5.49 0.60 118.60 113.11 X X X N1 C6 N6 DA DA DA 7 7 7 N 4 1.84 0.30 108.30 110.14 X X X O4' C1' N1 DC DC DC 11 11 11 N 4 -4.72 0.70 121.90 117.18 X X X N3 C2 O2 DC DC DC 11 11 11 N 4 2.63 0.30 108.30 110.93 X X X O4' C1' N9 DG DG DG 13 13 13 N 4 2.47 0.30 108.30 110.77 X X X O4' C1' N9 DG DG DG 14 14 14 N 4 -3.37 0.50 117.00 113.63 X X X C4 C5 C6 DA DA DA 15 15 15 N 4 3.81 0.50 117.70 121.51 X X X C5 C6 N1 DA DA DA 15 15 15 N 4 -5.55 0.60 118.60 113.05 X X X N1 C6 N6 DA DA DA 15 15 15 N 4 2.71 0.30 108.30 111.01 X X X O4' C1' N9 DG DG DG 17 17 17 N 4 3.61 0.30 108.30 111.91 X X X O4' C1' N9 DG DG DG 18 18 18 N 4 2.00 0.30 108.30 110.30 X X X O4' C1' N9 DA DA DA 19 19 19 N 4 -3.28 0.50 117.00 113.72 X X X C4 C5 C6 DA DA DA 19 19 19 N 4 3.87 0.50 117.70 121.57 X X X C5 C6 N1 DA DA DA 19 19 19 N 4 -5.50 0.60 118.60 113.10 X X X N1 C6 N6 DA DA DA 19 19 19 N 4 -3.45 0.50 117.00 113.55 X X X C4 C5 C6 DA DA DA 20 20 20 N 4 3.67 0.50 117.70 121.37 X X X C5 C6 N1 DA DA DA 20 20 20 N 4 -5.52 0.60 118.60 113.08 X X X N1 C6 N6 DA DA DA 20 20 20 N 4 5.70 0.30 108.30 114.00 X X X O4' C1' N1 DT DT DT 21 21 21 N 5 1.98 0.30 108.30 110.28 X X X O4' C1' N1 DT DT DT 1 1 1 N 5 3.93 0.30 108.30 112.23 X X X O4' C1' N9 DG DG DG 2 2 2 N 5 2.85 0.30 108.30 111.15 X X X O4' C1' N9 DA DA DA 3 3 3 N 5 -3.25 0.50 117.00 113.75 X X X C4 C5 C6 DA DA DA 3 3 3 N 5 3.51 0.50 117.70 121.21 X X X C5 C6 N1 DA DA DA 3 3 3 N 5 -5.32 0.60 118.60 113.28 X X X N1 C6 N6 DA DA DA 3 3 3 N 5 2.00 0.30 108.30 110.30 X X X O4' C1' N9 DG DG DG 5 5 5 N 5 -3.25 0.50 117.00 113.75 X X X C4 C5 C6 DA DA DA 7 7 7 N 5 3.77 0.50 117.70 121.47 X X X C5 C6 N1 DA DA DA 7 7 7 N 5 -5.64 0.60 118.60 112.96 X X X N1 C6 N6 DA DA DA 7 7 7 N 5 2.04 0.30 108.30 110.34 X X X O4' C1' N9 DG DG DG 8 8 8 N 5 4.10 0.30 108.30 112.40 X X X O4' C1' N9 DG DG DG 9 9 9 N 5 3.21 0.30 108.30 111.51 X X X O4' C1' N9 DG DG DG 10 10 10 N 5 1.83 0.30 108.30 110.13 X X X O4' C1' N1 DC DC DC 11 11 11 N 5 -4.80 0.70 121.90 117.10 X X X N3 C2 O2 DC DC DC 11 11 11 N 5 3.45 0.30 108.30 111.75 X X X O4' C1' N9 DG DG DG 13 13 13 N 5 3.30 0.30 108.30 111.60 X X X O4' C1' N9 DG DG DG 14 14 14 N 5 -3.33 0.50 117.00 113.67 X X X C4 C5 C6 DA DA DA 15 15 15 N 5 3.75 0.50 117.70 121.45 X X X C5 C6 N1 DA DA DA 15 15 15 N 5 -5.65 0.60 118.60 112.95 X X X N1 C6 N6 DA DA DA 15 15 15 N 5 3.76 0.30 108.30 112.06 X X X O4' C1' N9 DG DG DG 17 17 17 N 5 3.49 0.30 108.30 111.79 X X X O4' C1' N9 DG DG DG 18 18 18 N 5 2.31 0.30 108.30 110.61 X X X O4' C1' N9 DA DA DA 19 19 19 N 5 -3.28 0.50 117.00 113.72 X X X C4 C5 C6 DA DA DA 19 19 19 N 5 3.76 0.50 117.70 121.46 X X X C5 C6 N1 DA DA DA 19 19 19 N 5 -5.44 0.60 118.60 113.16 X X X N1 C6 N6 DA DA DA 19 19 19 N 5 -3.38 0.50 117.00 113.62 X X X C4 C5 C6 DA DA DA 20 20 20 N 5 3.72 0.50 117.70 121.42 X X X C5 C6 N1 DA DA DA 20 20 20 N 5 -5.57 0.60 118.60 113.03 X X X N1 C6 N6 DA DA DA 20 20 20 N 5 5.72 0.30 108.30 114.02 X X X O4' C1' N1 DT DT DT 21 21 21 N 6 2.01 0.30 108.30 110.31 X X X O4' C1' N1 DT DT DT 1 1 1 N 6 -3.62 0.60 122.90 119.28 X X X C6 C5 C7 DT DT DT 1 1 1 N 6 4.24 0.30 108.30 112.54 X X X O4' C1' N9 DG DG DG 2 2 2 N 6 2.56 0.30 108.30 110.86 X X X O4' C1' N9 DA DA DA 3 3 3 N 6 -3.33 0.50 117.00 113.67 X X X C4 C5 C6 DA DA DA 3 3 3 N 6 3.59 0.50 117.70 121.29 X X X C5 C6 N1 DA DA DA 3 3 3 N 6 -5.50 0.60 118.60 113.10 X X X N1 C6 N6 DA DA DA 3 3 3 N 6 2.50 0.30 108.30 110.80 X X X O4' C1' N9 DG DG DG 4 4 4 N 6 2.05 0.30 108.30 110.35 X X X O4' C1' N9 DG DG DG 6 6 6 N 6 -3.24 0.50 117.00 113.76 X X X C4 C5 C6 DA DA DA 7 7 7 N 6 3.70 0.50 117.70 121.40 X X X C5 C6 N1 DA DA DA 7 7 7 N 6 -5.67 0.60 118.60 112.93 X X X N1 C6 N6 DA DA DA 7 7 7 N 6 2.33 0.30 108.30 110.63 X X X O4' C1' N9 DG DG DG 9 9 9 N 6 2.30 0.30 108.30 110.60 X X X O4' C1' N9 DG DG DG 10 10 10 N 6 2.00 0.30 108.30 110.30 X X X O4' C1' N1 DC DC DC 11 11 11 N 6 -4.82 0.70 121.90 117.08 X X X N3 C2 O2 DC DC DC 11 11 11 N 6 3.15 0.30 108.30 111.45 X X X O4' C1' N9 DG DG DG 13 13 13 N 6 2.99 0.30 108.30 111.29 X X X O4' C1' N9 DG DG DG 14 14 14 N 6 -3.26 0.50 117.00 113.74 X X X C4 C5 C6 DA DA DA 15 15 15 N 6 3.64 0.50 117.70 121.34 X X X C5 C6 N1 DA DA DA 15 15 15 N 6 -5.48 0.60 118.60 113.12 X X X N1 C6 N6 DA DA DA 15 15 15 N 6 1.84 0.30 108.30 110.14 X X X O4' C1' N9 DG DG DG 17 17 17 N 6 2.60 0.30 108.30 110.90 X X X O4' C1' N9 DG DG DG 18 18 18 N 6 2.74 0.30 108.30 111.04 X X X O4' C1' N9 DA DA DA 19 19 19 N 6 -3.23 0.50 117.00 113.77 X X X C4 C5 C6 DA DA DA 19 19 19 N 6 3.73 0.50 117.70 121.43 X X X C5 C6 N1 DA DA DA 19 19 19 N 6 -5.39 0.60 118.60 113.21 X X X N1 C6 N6 DA DA DA 19 19 19 N 6 -3.33 0.50 117.00 113.67 X X X C4 C5 C6 DA DA DA 20 20 20 N 6 3.68 0.50 117.70 121.38 X X X C5 C6 N1 DA DA DA 20 20 20 N 6 -5.70 0.60 118.60 112.90 X X X N1 C6 N6 DA DA DA 20 20 20 N 6 5.68 0.30 108.30 113.98 X X X O4' C1' N1 DT DT DT 21 21 21 N 7 2.02 0.30 108.30 110.32 X X X O4' C1' N1 DT DT DT 1 1 1 N 7 3.20 0.30 108.30 111.50 X X X O4' C1' N9 DG DG DG 2 2 2 N 7 2.85 0.30 108.30 111.15 X X X O4' C1' N9 DA DA DA 3 3 3 N 7 -3.27 0.50 117.00 113.73 X X X C4 C5 C6 DA DA DA 3 3 3 N 7 3.59 0.50 117.70 121.29 X X X C5 C6 N1 DA DA DA 3 3 3 N 7 -5.36 0.60 118.60 113.24 X X X N1 C6 N6 DA DA DA 3 3 3 N 7 -3.19 0.50 117.00 113.81 X X X C4 C5 C6 DA DA DA 7 7 7 N 7 3.67 0.50 117.70 121.37 X X X C5 C6 N1 DA DA DA 7 7 7 N 7 -5.50 0.60 118.60 113.10 X X X N1 C6 N6 DA DA DA 7 7 7 N 7 3.99 0.30 108.30 112.29 X X X O4' C1' N9 DG DG DG 9 9 9 N 7 2.92 0.30 108.30 111.22 X X X O4' C1' N9 DG DG DG 10 10 10 N 7 -4.80 0.70 121.90 117.10 X X X N3 C2 O2 DC DC DC 11 11 11 N 7 3.67 0.30 108.30 111.97 X X X O4' C1' N9 DG DG DG 13 13 13 N 7 2.81 0.30 108.30 111.11 X X X O4' C1' N9 DG DG DG 14 14 14 N 7 -3.29 0.50 117.00 113.71 X X X C4 C5 C6 DA DA DA 15 15 15 N 7 3.71 0.50 117.70 121.41 X X X C5 C6 N1 DA DA DA 15 15 15 N 7 -5.52 0.60 118.60 113.08 X X X N1 C6 N6 DA DA DA 15 15 15 N 7 2.83 0.30 108.30 111.13 X X X O4' C1' N9 DG DG DG 17 17 17 N 7 2.93 0.30 108.30 111.23 X X X O4' C1' N9 DG DG DG 18 18 18 N 7 2.68 0.30 108.30 110.98 X X X O4' C1' N9 DA DA DA 19 19 19 N 7 -3.31 0.50 117.00 113.69 X X X C4 C5 C6 DA DA DA 19 19 19 N 7 3.75 0.50 117.70 121.45 X X X C5 C6 N1 DA DA DA 19 19 19 N 7 -5.36 0.60 118.60 113.24 X X X N1 C6 N6 DA DA DA 19 19 19 N 7 -3.42 0.50 117.00 113.58 X X X C4 C5 C6 DA DA DA 20 20 20 N 7 3.72 0.50 117.70 121.42 X X X C5 C6 N1 DA DA DA 20 20 20 N 7 -5.53 0.60 118.60 113.07 X X X N1 C6 N6 DA DA DA 20 20 20 N 7 5.71 0.30 108.30 114.01 X X X O4' C1' N1 DT DT DT 21 21 21 N 8 2.45 0.30 108.30 110.75 X X X O4' C1' N1 DT DT DT 1 1 1 N 8 -3.60 0.60 122.90 119.30 X X X C6 C5 C7 DT DT DT 1 1 1 N 8 3.60 0.30 108.30 111.90 X X X O4' C1' N9 DG DG DG 2 2 2 N 8 3.09 0.30 108.30 111.39 X X X O4' C1' N9 DA DA DA 3 3 3 N 8 -3.26 0.50 117.00 113.74 X X X C4 C5 C6 DA DA DA 3 3 3 N 8 3.63 0.50 117.70 121.33 X X X C5 C6 N1 DA DA DA 3 3 3 N 8 -5.34 0.60 118.60 113.26 X X X N1 C6 N6 DA DA DA 3 3 3 N 8 2.21 0.30 108.30 110.51 X X X O4' C1' N9 DG DG DG 4 4 4 N 8 2.11 0.30 108.30 110.41 X X X O4' C1' N9 DG DG DG 6 6 6 N 8 -3.40 0.50 117.00 113.60 X X X C4 C5 C6 DA DA DA 7 7 7 N 8 3.78 0.50 117.70 121.48 X X X C5 C6 N1 DA DA DA 7 7 7 N 8 -5.71 0.60 118.60 112.89 X X X N1 C6 N6 DA DA DA 7 7 7 N 8 1.91 0.30 108.30 110.21 X X X O4' C1' N9 DG DG DG 9 9 9 N 8 2.15 0.30 108.30 110.45 X X X O4' C1' N9 DG DG DG 10 10 10 N 8 1.97 0.30 108.30 110.27 X X X O4' C1' N1 DC DC DC 11 11 11 N 8 -4.75 0.70 121.90 117.15 X X X N3 C2 O2 DC DC DC 11 11 11 N 8 2.71 0.30 108.30 111.01 X X X O4' C1' N9 DG DG DG 13 13 13 N 8 2.34 0.30 108.30 110.64 X X X O4' C1' N9 DG DG DG 14 14 14 N 8 -3.33 0.50 117.00 113.67 X X X C4 C5 C6 DA DA DA 15 15 15 N 8 3.75 0.50 117.70 121.45 X X X C5 C6 N1 DA DA DA 15 15 15 N 8 -5.53 0.60 118.60 113.07 X X X N1 C6 N6 DA DA DA 15 15 15 N 8 2.74 0.30 108.30 111.04 X X X O4' C1' N9 DG DG DG 18 18 18 N 8 2.12 0.30 108.30 110.42 X X X O4' C1' N9 DA DA DA 19 19 19 N 8 -3.27 0.50 117.00 113.73 X X X C4 C5 C6 DA DA DA 19 19 19 N 8 3.66 0.50 117.70 121.36 X X X C5 C6 N1 DA DA DA 19 19 19 N 8 -5.33 0.60 118.60 113.27 X X X N1 C6 N6 DA DA DA 19 19 19 N 8 -3.39 0.50 117.00 113.61 X X X C4 C5 C6 DA DA DA 20 20 20 N 8 3.68 0.50 117.70 121.38 X X X C5 C6 N1 DA DA DA 20 20 20 N 8 -5.53 0.60 118.60 113.07 X X X N1 C6 N6 DA DA DA 20 20 20 N 8 5.89 0.30 108.30 114.19 X X X O4' C1' N1 DT DT DT 21 21 21 N 9 2.18 0.30 108.30 110.48 X X X O4' C1' N1 DT DT DT 1 1 1 N 9 4.01 0.30 108.30 112.31 X X X O4' C1' N9 DG DG DG 2 2 2 N 9 2.97 0.30 108.30 111.27 X X X O4' C1' N9 DA DA DA 3 3 3 N 9 -3.34 0.50 117.00 113.66 X X X C4 C5 C6 DA DA DA 3 3 3 N 9 3.52 0.50 117.70 121.22 X X X C5 C6 N1 DA DA DA 3 3 3 N 9 -5.53 0.60 118.60 113.07 X X X N1 C6 N6 DA DA DA 3 3 3 N 9 1.84 0.30 108.30 110.14 X X X O4' C1' N9 DG DG DG 4 4 4 N 9 1.85 0.30 108.30 110.15 X X X O4' C1' N9 DG DG DG 5 5 5 N 9 -3.43 0.50 117.00 113.57 X X X C4 C5 C6 DA DA DA 7 7 7 N 9 3.82 0.50 117.70 121.52 X X X C5 C6 N1 DA DA DA 7 7 7 N 9 -5.64 0.60 118.60 112.96 X X X N1 C6 N6 DA DA DA 7 7 7 N 9 2.84 0.30 108.30 111.14 X X X O4' C1' N9 DG DG DG 9 9 9 N 9 2.92 0.30 108.30 111.22 X X X O4' C1' N9 DG DG DG 10 10 10 N 9 2.02 0.30 108.30 110.32 X X X O4' C1' N1 DC DC DC 11 11 11 N 9 -4.81 0.70 121.90 117.09 X X X N3 C2 O2 DC DC DC 11 11 11 N 9 2.20 0.30 108.30 110.50 X X X O4' C1' N9 DG DG DG 12 12 12 N 9 4.61 0.30 108.30 112.91 X X X O4' C1' N9 DG DG DG 13 13 13 N 9 -4.22 0.70 119.90 115.68 X X X N3 C2 N2 DG DG DG 13 13 13 N 9 2.77 0.30 108.30 111.07 X X X O4' C1' N9 DG DG DG 14 14 14 N 9 -3.37 0.50 117.00 113.63 X X X C4 C5 C6 DA DA DA 15 15 15 N 9 3.79 0.50 117.70 121.49 X X X C5 C6 N1 DA DA DA 15 15 15 N 9 -5.52 0.60 118.60 113.08 X X X N1 C6 N6 DA DA DA 15 15 15 N 9 4.01 0.30 108.30 112.31 X X X O4' C1' N9 DG DG DG 17 17 17 N 9 3.21 0.30 108.30 111.51 X X X O4' C1' N9 DG DG DG 18 18 18 N 9 -3.19 0.50 117.00 113.81 X X X C4 C5 C6 DA DA DA 19 19 19 N 9 3.76 0.50 117.70 121.46 X X X C5 C6 N1 DA DA DA 19 19 19 N 9 -5.44 0.60 118.60 113.16 X X X N1 C6 N6 DA DA DA 19 19 19 N 9 -3.40 0.50 117.00 113.60 X X X C4 C5 C6 DA DA DA 20 20 20 N 9 3.71 0.50 117.70 121.41 X X X C5 C6 N1 DA DA DA 20 20 20 N 9 -5.62 0.60 118.60 112.98 X X X N1 C6 N6 DA DA DA 20 20 20 N 9 5.81 0.30 108.30 114.11 X X X O4' C1' N1 DT DT DT 21 21 21 N 9 -3.69 0.60 122.90 119.21 X X X C6 C5 C7 DT DT DT 21 21 21 N 10 3.57 0.30 108.30 111.87 X X X O4' C1' N9 DG DG DG 2 2 2 N 10 2.68 0.30 108.30 110.98 X X X O4' C1' N9 DA DA DA 3 3 3 N 10 -3.33 0.50 117.00 113.67 X X X C4 C5 C6 DA DA DA 3 3 3 N 10 3.70 0.50 117.70 121.40 X X X C5 C6 N1 DA DA DA 3 3 3 N 10 -5.70 0.60 118.60 112.90 X X X N1 C6 N6 DA DA DA 3 3 3 N 10 2.55 0.30 108.30 110.85 X X X O4' C1' N9 DG DG DG 4 4 4 N 10 -3.30 0.50 117.00 113.70 X X X C4 C5 C6 DA DA DA 7 7 7 N 10 3.75 0.50 117.70 121.45 X X X C5 C6 N1 DA DA DA 7 7 7 N 10 -5.61 0.60 118.60 112.99 X X X N1 C6 N6 DA DA DA 7 7 7 N 10 1.97 0.30 108.30 110.27 X X X O4' C1' N9 DG DG DG 8 8 8 N 10 2.95 0.30 108.30 111.25 X X X O4' C1' N9 DG DG DG 9 9 9 N 10 2.55 0.30 108.30 110.85 X X X O4' C1' N9 DG DG DG 10 10 10 N 10 1.97 0.30 108.30 110.27 X X X O4' C1' N1 DC DC DC 11 11 11 N 10 -4.84 0.70 121.90 117.06 X X X N3 C2 O2 DC DC DC 11 11 11 N 10 1.87 0.30 108.30 110.17 X X X O4' C1' N9 DG DG DG 12 12 12 N 10 2.77 0.30 108.30 111.07 X X X O4' C1' N9 DG DG DG 13 13 13 N 10 2.31 0.30 108.30 110.61 X X X O4' C1' N9 DG DG DG 14 14 14 N 10 -3.26 0.50 117.00 113.74 X X X C4 C5 C6 DA DA DA 15 15 15 N 10 3.81 0.50 117.70 121.51 X X X C5 C6 N1 DA DA DA 15 15 15 N 10 -5.62 0.60 118.60 112.98 X X X N1 C6 N6 DA DA DA 15 15 15 N 10 2.30 0.30 108.30 110.60 X X X O4' C1' N9 DG DG DG 18 18 18 N 10 2.41 0.30 108.30 110.71 X X X O4' C1' N9 DA DA DA 19 19 19 N 10 -3.34 0.50 117.00 113.66 X X X C4 C5 C6 DA DA DA 19 19 19 N 10 3.76 0.50 117.70 121.46 X X X C5 C6 N1 DA DA DA 19 19 19 N 10 -5.31 0.60 118.60 113.29 X X X N1 C6 N6 DA DA DA 19 19 19 N 10 -3.31 0.50 117.00 113.69 X X X C4 C5 C6 DA DA DA 20 20 20 N 10 3.78 0.50 117.70 121.48 X X X C5 C6 N1 DA DA DA 20 20 20 N 10 -5.60 0.60 118.60 113.00 X X X N1 C6 N6 DA DA DA 20 20 20 N 10 7.29 1.20 119.70 126.99 X X X C3' O3' P DA DA DT 20 20 21 Y 10 4.50 0.30 108.30 112.80 X X X O4' C1' N1 DT DT DT 21 21 21 N 10 -3.73 0.60 122.30 118.57 X X X N3 C2 O2 DT DT DT 21 21 21 N 10 -3.62 0.60 122.90 119.28 X X X C6 C5 C7 DT DT DT 21 21 21 N N Solution structure of free BLM promoter G-quadruplex 1 N N hydrog TYPE_6_PAIR X DG 4 A N1 DG 4 1_555 X DG 8 A O6 DG 8 1_555 hydrog TYPE_6_PAIR X DG 4 A N2 DG 4 1_555 X DG 8 A N7 DG 8 1_555 hydrog TYPE_6_PAIR X DG 4 A N7 DG 4 1_555 X DG 16 A N2 DG 16 1_555 hydrog TYPE_6_PAIR X DG 4 A O6 DG 4 1_555 X DG 16 A N1 DG 16 1_555 hydrog TYPE_6_PAIR X DG 5 A N1 DG 5 1_555 X DG 9 A O6 DG 9 1_555 hydrog TYPE_6_PAIR X DG 5 A N2 DG 5 1_555 X DG 9 A N7 DG 9 1_555 hydrog TYPE_6_PAIR X DG 5 A N7 DG 5 1_555 X DG 17 A N2 DG 17 1_555 hydrog TYPE_6_PAIR X DG 5 A O6 DG 5 1_555 X DG 17 A N1 DG 17 1_555 hydrog TYPE_6_PAIR X DG 6 A N1 DG 6 1_555 X DG 10 A O6 DG 10 1_555 hydrog TYPE_6_PAIR X DG 6 A N2 DG 6 1_555 X DG 10 A N7 DG 10 1_555 hydrog TYPE_6_PAIR X DG 6 A N7 DG 6 1_555 X DG 18 A N2 DG 18 1_555 hydrog TYPE_6_PAIR X DG 6 A O6 DG 6 1_555 X DG 18 A N1 DG 18 1_555 hydrog TYPE_6_PAIR X DG 8 A N1 DG 8 1_555 X DG 12 A O6 DG 12 1_555 hydrog TYPE_6_PAIR X DG 8 A N2 DG 8 1_555 X DG 12 A N7 DG 12 1_555 hydrog TYPE_6_PAIR X DG 9 A N1 DG 9 1_555 X DG 13 A O6 DG 13 1_555 hydrog TYPE_6_PAIR X DG 9 A N2 DG 9 1_555 X DG 13 A N7 DG 13 1_555 hydrog TYPE_6_PAIR X DG 10 A N1 DG 10 1_555 X DG 14 A O6 DG 14 1_555 hydrog TYPE_6_PAIR X DG 10 A N2 DG 10 1_555 X DG 14 A N7 DG 14 1_555 hydrog TYPE_6_PAIR X DG 12 A N1 DG 12 1_555 X DG 16 A O6 DG 16 1_555 hydrog TYPE_6_PAIR X DG 12 A N2 DG 12 1_555 X DG 16 A N7 DG 16 1_555 hydrog TYPE_6_PAIR X DG 13 A N1 DG 13 1_555 X DG 17 A O6 DG 17 1_555 hydrog TYPE_6_PAIR X DG 13 A N2 DG 13 1_555 X DG 17 A N7 DG 17 1_555 hydrog TYPE_6_PAIR X DG 14 A N1 DG 14 1_555 X DG 18 A O6 DG 18 1_555 hydrog TYPE_6_PAIR X DG 14 A N2 DG 14 1_555 X DG 18 A N7 DG 18 1_555 DNA BLM promoter, G-quadruplex, NMR solution structure, DNA 9JO0 PDB 1 1 9JO0 1 21 9JO0 1 21 9JO0 X 1 1 21