0.017928 0.010351 0.000000 0.000000 0.020702 0.000000 0.000000 0.000000 0.009048 0.00000 0.00000 0.00000 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 16.26893 3.65395 3.58509 77.28589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 8.66788 8.58341 1.68052 12.31593 0.56275 110.00227 0.0 3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.01032 2.96436 19.97189 1.75589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.49882 3.47563 15.80542 1.70748 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.51135 5.44231 1.42069 35.72801 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0000-0002-4999-6908 Ali, A. 0000-0003-3946-0939 Yatsunyk, L.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.000 90.000 120.000 55.778 55.778 110.523 297789.357 C27 H17 N3 O 2 399.443 (5S)-6-oxo-6H-dipyrido[1,2-b:1',2'-j]quinolizino[3,2-f][2,8]phenanthroline-12,19-diium non-polymer Ca 2 40.078 CALCIUM ION non-polymer C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer K 1 39.098 POTASSIUM ION non-polymer N 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N C N 10 N C Y 11 N C Y 12 N C N 13 N C N 14 N C N 15 N C N 16 N C N 17 N C Y 18 N C Y 19 N C Y 20 N C Y 21 N C Y 22 N C Y 23 N C Y 24 N C Y 25 N C Y 26 N C Y 27 N C N 28 N N Y 29 N N Y 30 N N N 31 N O N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N CA N 50 N O N 51 N P N 52 N O N 53 N O N 54 N O N 55 N C N 56 R C N 57 N O N 58 S C N 59 N O N 60 N C N 61 R C Y 62 N N Y 63 N C Y 64 N N Y 65 N C N 66 N C N 67 N O N 68 N N N 69 N C N 70 N N N 71 N N Y 72 N C N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N O N 88 N P N 89 N O N 90 N O N 91 N O N 92 N C N 93 R C N 94 N O N 95 S C N 96 N O N 97 N C N 98 R C N 99 N N N 100 N C N 101 N O N 102 N N N 103 N C N 104 N O N 105 N C N 106 N C N 107 N C N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N O N 124 N H N 125 N H N 126 N K Y 1 N doub Y 2 N sing Y 3 N sing Y 4 N doub Y 5 N sing Y 6 N sing Y 7 N doub Y 8 N doub Y 9 N sing Y 10 N sing Y 11 N doub Y 12 N sing Y 13 N sing Y 14 N doub Y 15 N sing Y 16 N doub Y 17 N doub Y 18 N sing Y 19 N sing Y 20 N sing Y 21 N doub Y 22 N sing Y 23 N doub Y 24 N sing Y 25 N doub Y 26 N sing N 27 N sing N 28 N sing N 29 N doub N 30 N doub N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N doub N 36 N doub N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N doub N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing Y 78 N sing Y 79 N sing Y 80 N doub N 81 N sing Y 82 N sing N 83 N sing Y 84 N doub N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing To Be Published 0353 Hybrid G-quadruplex from Tetrahymena thermophila telomeric sequence in complex with triangular star shaped TrisQ ligand 0000-0002-4999-6908 0000-0003-3946-0939 10.2210/pdb9e8e/pdb pdb_00009e8e 183 1 N PIXEL 2024-07-11 DECTRIS EIGER X 16M SINGLE WAVELENGTH M x-ray 1 0.97934 1.0 17-ID-2 NSLS-II 0.97934 SYNCHROTRON NSLS-II BEAMLINE 17-ID-2 7985.084 Hybrid G-quadruplex DNA 1 syn polymer 399.443 (5S)-6-oxo-6H-dipyrido[1,2-b:1',2'-j]quinolizino[3,2-f][2,8]phenanthroline-12,19-diium 1 syn non-polymer 39.098 POTASSIUM ION 3 syn non-polymer 40.078 CALCIUM ION 2 syn non-polymer 18.015 water 29 nat water no no (DG)(DT)(DT)(DG)(DG)(DG)(DG)(DT)(DT)(DG)(DG)(DG)(DG)(DT)(DT)(DG)(DG)(DG)(DG)(DT) (DT)(DG)(DG)(DG)(DG) GTTGGGGTTGGGGTTGGGGTTGGGG A polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n 1 3.14 60.80 VAPOR DIFFUSION, HANGING DROP potassium chloride, calcium chloride dihydrate, HEPES sodium pH 7.0, PEG 400 298 -5.089 3 6 A 4 A 22 -90.361 A_DG4:DG22_A 1 2.495 1.589 0.192 3.563 -3.140 3 6 A 18 A 23 -91.701 A_DG18:DG23_A 2 1.446 1.400 0.070 3.511 6.749 3 6 A 17 A 24 -92.953 A_DG17:DG24_A 3 -7.061 1.166 0.096 3.582 2.512 3 6 A 6 A 11 -91.483 A_DG6:DG11_A 4 0.215 1.398 -0.176 3.511 0.035 -178.251 A A 4 18 -24.385 A A 22 23 -0.220 48.663 1.450 3.015 AA_DG4DG18:DG23DG22_AA 1 -168.975 -84.673 -130.240 -1.502 0.745 3.372 31.629 A A 18 17 0.205 A A 23 24 3.341 0.112 -0.580 -1.109 AA_DG18DG17:DG24DG23_AA 2 -2.555 4.693 31.528 -2.056 0.579 0.013 -178.556 A A 17 6 1.517 A A 24 11 0.011 -3.035 1.518 3.704 AA_DG17DG6:DG11DG24_AA 3 0.382 0.191 -178.555 -1.852 0.759 repository Initial release 1 0 2026-03-18 United States National Institutes of Health/National Cancer Institute (NIH/NCI) 1R15CA253134 lyatsun1@swarthmore.edu 0000-0003-3946-0939 Liliya Yatsunyk principal investigator/group leader N RCSB N RCSB 2024-11-05 REL REL A1AVT A1AVT SUBJECT OF INVESTIGATION A1AVT (5S)-6-oxo-6H-dipyrido[1,2-b:1',2'-j]quinolizino[3,2-f][2,8]phenanthroline-12,19-diium K POTASSIUM ION CA CALCIUM ION HOH water 5911 Tetrahymena thermophila sample 1 25 Y N 9C73 PDB experimental model LIG 100 2 A1AVT A1AVT 101 A K 1 3 K K 102 A K 2 3 K K 103 A K 3 3 K K 104 A CA 1 4 CA CA 105 A CA 2 4 CA CA 106 A HOH 18 5 HOH HOH 201 A HOH 14 5 HOH HOH 202 A HOH 6 5 HOH HOH 203 A HOH 10 5 HOH HOH 204 A HOH 11 5 HOH HOH 205 A HOH 22 5 HOH HOH 206 A HOH 12 5 HOH HOH 207 A HOH 28 5 HOH HOH 208 A HOH 16 5 HOH HOH 209 A HOH 24 5 HOH HOH 210 A HOH 4 5 HOH HOH 211 A HOH 17 5 HOH HOH 212 A HOH 5 5 HOH HOH 213 A HOH 19 5 HOH HOH 214 A HOH 20 5 HOH HOH 215 A HOH 15 5 HOH HOH 216 A HOH 21 5 HOH HOH 217 A HOH 2 5 HOH HOH 218 A HOH 8 5 HOH HOH 219 A HOH 3 5 HOH HOH 220 A HOH 26 5 HOH HOH 221 A HOH 7 5 HOH HOH 222 A HOH 9 5 HOH HOH 223 A HOH 25 5 HOH HOH 224 A HOH 1 5 HOH HOH 225 A HOH 29 5 HOH HOH 226 A HOH 23 5 HOH HOH 227 A HOH 13 5 HOH HOH 228 A HOH 27 5 HOH HOH 229 A DG 1 n 1 DG 1 A DT 2 n 2 DT 2 A DT 3 n 3 DT 3 A DG 4 n 4 DG 4 A DG 5 n 5 DG 5 A DG 6 n 6 DG 6 A DG 7 n 7 DG 7 A DT 8 n 8 DT 8 A DT 9 n 9 DT 9 A DG 10 n 10 DG 10 A DG 11 n 11 DG 11 A DG 12 n 12 DG 12 A DG 13 n 13 DG 13 A DT 14 n 14 DT 14 A DT 15 n 15 DT 15 A DG 16 n 16 DG 16 A DG 17 n 17 DG 17 A DG 18 n 18 DG 18 A DG 19 n 19 DG 19 A DT 20 n 20 DT 20 A DT 21 n 21 DT 21 A DG 22 n 22 DG 22 A DG 23 n 23 DG 23 A DG 24 n 24 DG 24 A DG 25 n 25 DG 25 A author_defined_assembly 1 monomeric native gel electrophoresis A DG 1 A O6 DG 1 1_555 A K 102 C K K 10_444 A DG 4 A O6 DG 4 1_555 70.5 A DG 1 A O6 DG 1 1_555 A K 102 C K K 10_444 A DG 5 A O6 DG 5 1_555 68.6 A DG 4 A O6 DG 4 1_555 A K 102 C K K 10_444 A DG 5 A O6 DG 5 1_555 4.4 A DG 1 A O6 DG 1 1_555 A K 102 C K K 10_444 A DG 10 A O6 DG 10 1_555 79.5 A DG 4 A O6 DG 4 1_555 A K 102 C K K 10_444 A DG 10 A O6 DG 10 1_555 8.9 A DG 5 A O6 DG 5 1_555 A K 102 C K K 10_444 A DG 10 A O6 DG 10 1_555 11.5 A DG 1 A O6 DG 1 1_555 A K 102 C K K 10_444 A DG 18 A O6 DG 18 1_555 83.6 A DG 4 A O6 DG 4 1_555 A K 102 C K K 10_444 A DG 18 A O6 DG 18 1_555 17.1 A DG 5 A O6 DG 5 1_555 A K 102 C K K 10_444 A DG 18 A O6 DG 18 1_555 16.5 A DG 10 A O6 DG 10 1_555 A K 102 C K K 10_444 A DG 18 A O6 DG 18 1_555 11.6 A DG 1 A O6 DG 1 1_555 A K 102 C K K 10_444 A DG 19 A O6 DG 19 1_555 88.4 A DG 4 A O6 DG 4 1_555 A K 102 C K K 10_444 A DG 19 A O6 DG 19 1_555 21.9 A DG 5 A O6 DG 5 1_555 A K 102 C K K 10_444 A DG 19 A O6 DG 19 1_555 21.5 A DG 10 A O6 DG 10 1_555 A K 102 C K K 10_444 A DG 19 A O6 DG 19 1_555 15.3 A DG 18 A O6 DG 18 1_555 A K 102 C K K 10_444 A DG 19 A O6 DG 19 1_555 5.1 A DG 1 A O6 DG 1 1_555 A K 102 C K K 10_444 A DG 22 A O6 DG 22 1_555 74.4 A DG 4 A O6 DG 4 1_555 A K 102 C K K 10_444 A DG 22 A O6 DG 22 1_555 15.9 A DG 5 A O6 DG 5 1_555 A K 102 C K K 10_444 A DG 22 A O6 DG 22 1_555 12.7 A DG 10 A O6 DG 10 1_555 A K 102 C K K 10_444 A DG 22 A O6 DG 22 1_555 16.2 A DG 18 A O6 DG 18 1_555 A K 102 C K K 10_444 A DG 22 A O6 DG 22 1_555 10.4 A DG 19 A O6 DG 19 1_555 A K 102 C K K 10_444 A DG 22 A O6 DG 22 1_555 14.4 A DG 1 A O6 DG 1 1_555 A K 102 C K K 10_444 A DG 23 A O6 DG 23 1_555 73.5 A DG 4 A O6 DG 4 1_555 A K 102 C K K 10_444 A DG 23 A O6 DG 23 1_555 15.7 A DG 5 A O6 DG 5 1_555 A K 102 C K K 10_444 A DG 23 A O6 DG 23 1_555 12.3 A DG 10 A O6 DG 10 1_555 A K 102 C K K 10_444 A DG 23 A O6 DG 23 1_555 16.4 A DG 18 A O6 DG 18 1_555 A K 102 C K K 10_444 A DG 23 A O6 DG 23 1_555 11.1 A DG 19 A O6 DG 19 1_555 A K 102 C K K 10_444 A DG 23 A O6 DG 23 1_555 15.2 A DG 22 A O6 DG 22 1_555 A K 102 C K K 10_444 A DG 23 A O6 DG 23 1_555 0.9 A DT 2 A OP2 DT 2 1_555 A CA 106 G CA CA 10_444 A DG 10 A OP2 DG 10 1_555 11.5 A DT 2 A OP2 DT 2 1_555 A CA 106 G CA CA 10_444 A DG 17 A OP1 DG 17 1_555 42.4 A DG 10 A OP2 DG 10 1_555 A CA 106 G CA CA 10_444 A DG 17 A OP1 DG 17 1_555 52.9 A DT 2 A OP2 DT 2 1_555 A CA 106 G CA CA 10_444 A HOH 219 H O HOH 10_444 15.6 A DG 10 A OP2 DG 10 1_555 A CA 106 G CA CA 10_444 A HOH 219 H O HOH 10_444 5.8 A DG 17 A OP1 DG 17 1_555 A CA 106 G CA CA 10_444 A HOH 219 H O HOH 10_444 54.5 A DT 2 A OP2 DT 2 1_555 A CA 106 G CA CA 10_444 A HOH 226 H O HOH 10_444 17.5 A DG 10 A OP2 DG 10 1_555 A CA 106 G CA CA 10_444 A HOH 226 H O HOH 10_444 6.8 A DG 17 A OP1 DG 17 1_555 A CA 106 G CA CA 10_444 A HOH 226 H O HOH 10_444 59.6 A HOH 219 H O HOH 10_444 A CA 106 G CA CA 10_444 A HOH 226 H O HOH 10_444 9.1 A DT 3 A OP2 DT 3 1_555 A CA 105 F CA CA 1_555 A DG 5 A OP1 DG 5 1_555 113.3 A DT 3 A OP2 DT 3 1_555 A CA 105 F CA CA 1_555 A DT 14 A OP1 DT 14 1_555 103.5 A DG 5 A OP1 DG 5 1_555 A CA 105 F CA CA 1_555 A DT 14 A OP1 DT 14 1_555 10.9 A DT 3 A OP2 DT 3 1_555 A CA 105 F CA CA 1_555 A HOH 204 H O HOH 5_554 88.5 A DG 5 A OP1 DG 5 1_555 A CA 105 F CA CA 1_555 A HOH 204 H O HOH 5_554 149.8 A DT 14 A OP1 DT 14 1_555 A CA 105 F CA CA 1_555 A HOH 204 H O HOH 5_554 151.0 A DT 3 A OP2 DT 3 1_555 A CA 105 F CA CA 1_555 A HOH 205 H O HOH 5_554 169.2 A DG 5 A OP1 DG 5 1_555 A CA 105 F CA CA 1_555 A HOH 205 H O HOH 5_554 70.7 A DT 14 A OP1 DT 14 1_555 A CA 105 F CA CA 1_555 A HOH 205 H O HOH 5_554 79.4 A HOH 204 H O HOH 5_554 A CA 105 F CA CA 1_555 A HOH 205 H O HOH 5_554 84.4 A DT 3 A OP2 DT 3 1_555 A CA 105 F CA CA 1_555 A HOH 223 H O HOH 1_555 85.8 A DG 5 A OP1 DG 5 1_555 A CA 105 F CA CA 1_555 A HOH 223 H O HOH 1_555 80.5 A DT 14 A OP1 DT 14 1_555 A CA 105 F CA CA 1_555 A HOH 223 H O HOH 1_555 74.1 A HOH 204 H O HOH 5_554 A CA 105 F CA CA 1_555 A HOH 223 H O HOH 1_555 80.7 A HOH 205 H O HOH 5_554 A CA 105 F CA CA 1_555 A HOH 223 H O HOH 1_555 85.0 A DG 5 A O6 DG 5 1_555 A K 103 D K K 1_555 A DG 6 A O6 DG 6 1_555 81.2 A DG 5 A O6 DG 5 1_555 A K 103 D K K 1_555 A DG 10 A O6 DG 10 1_555 71.3 A DG 6 A O6 DG 6 1_555 A K 103 D K K 1_555 A DG 10 A O6 DG 10 1_555 89.7 A DG 5 A O6 DG 5 1_555 A K 103 D K K 1_555 A DG 11 A O6 DG 11 1_555 134.3 A DG 6 A O6 DG 6 1_555 A K 103 D K K 1_555 A DG 11 A O6 DG 11 1_555 65.5 A DG 10 A O6 DG 10 1_555 A K 103 D K K 1_555 A DG 11 A O6 DG 11 1_555 77.8 A DG 5 A O6 DG 5 1_555 A K 103 D K K 1_555 A DG 17 A O6 DG 17 1_555 149.9 A DG 6 A O6 DG 6 1_555 A K 103 D K K 1_555 A DG 17 A O6 DG 17 1_555 102.4 A DG 10 A O6 DG 10 1_555 A K 103 D K K 1_555 A DG 17 A O6 DG 17 1_555 137.9 A DG 11 A O6 DG 11 1_555 A K 103 D K K 1_555 A DG 17 A O6 DG 17 1_555 71.4 A DG 5 A O6 DG 5 1_555 A K 103 D K K 1_555 A DG 18 A O6 DG 18 1_555 107.1 A DG 6 A O6 DG 6 1_555 A K 103 D K K 1_555 A DG 18 A O6 DG 18 1_555 153.5 A DG 10 A O6 DG 10 1_555 A K 103 D K K 1_555 A DG 18 A O6 DG 18 1_555 70.3 A DG 11 A O6 DG 11 1_555 A K 103 D K K 1_555 A DG 18 A O6 DG 18 1_555 92.6 A DG 17 A O6 DG 17 1_555 A K 103 D K K 1_555 A DG 18 A O6 DG 18 1_555 83.0 A DG 5 A O6 DG 5 1_555 A K 103 D K K 1_555 A DG 23 A O6 DG 23 1_555 71.0 A DG 6 A O6 DG 6 1_555 A K 103 D K K 1_555 A DG 23 A O6 DG 23 1_555 138.6 A DG 10 A O6 DG 10 1_555 A K 103 D K K 1_555 A DG 23 A O6 DG 23 1_555 108.8 A DG 11 A O6 DG 11 1_555 A K 103 D K K 1_555 A DG 23 A O6 DG 23 1_555 153.0 A DG 17 A O6 DG 17 1_555 A K 103 D K K 1_555 A DG 23 A O6 DG 23 1_555 88.4 A DG 18 A O6 DG 18 1_555 A K 103 D K K 1_555 A DG 23 A O6 DG 23 1_555 66.6 A DG 5 A O6 DG 5 1_555 A K 103 D K K 1_555 A DG 24 A O6 DG 24 1_555 88.6 A DG 6 A O6 DG 6 1_555 A K 103 D K K 1_555 A DG 24 A O6 DG 24 1_555 71.6 A DG 10 A O6 DG 10 1_555 A K 103 D K K 1_555 A DG 24 A O6 DG 24 1_555 154.7 A DG 11 A O6 DG 11 1_555 A K 103 D K K 1_555 A DG 24 A O6 DG 24 1_555 108.2 A DG 17 A O6 DG 17 1_555 A K 103 D K K 1_555 A DG 24 A O6 DG 24 1_555 65.1 A DG 18 A O6 DG 18 1_555 A K 103 D K K 1_555 A DG 24 A O6 DG 24 1_555 132.3 A DG 23 A O6 DG 23 1_555 A K 103 D K K 1_555 A DG 24 A O6 DG 24 1_555 77.4 A DG 6 A O6 DG 6 1_555 A K 104 E K K 1_555 A DG 7 A O6 DG 7 1_555 72.5 A DG 6 A O6 DG 6 1_555 A K 104 E K K 1_555 A DG 11 A O6 DG 11 1_555 65.8 A DG 7 A O6 DG 7 1_555 A K 104 E K K 1_555 A DG 11 A O6 DG 11 1_555 91.6 A DG 6 A O6 DG 6 1_555 A K 104 E K K 1_555 A DG 12 A O6 DG 12 1_555 121.9 A DG 7 A O6 DG 7 1_555 A K 104 E K K 1_555 A DG 12 A O6 DG 12 1_555 74.2 A DG 11 A O6 DG 11 1_555 A K 104 E K K 1_555 A DG 12 A O6 DG 12 1_555 69.2 A DG 6 A O6 DG 6 1_555 A K 104 E K K 1_555 A DG 16 A O6 DG 16 1_555 161.8 A DG 7 A O6 DG 7 1_555 A K 104 E K K 1_555 A DG 16 A O6 DG 16 1_555 113.6 A DG 11 A O6 DG 11 1_555 A K 104 E K K 1_555 A DG 16 A O6 DG 16 1_555 129.0 A DG 12 A O6 DG 12 1_555 A K 104 E K K 1_555 A DG 16 A O6 DG 16 1_555 76.0 A DG 6 A O6 DG 6 1_555 A K 104 E K K 1_555 A DG 17 A O6 DG 17 1_555 100.8 A DG 7 A O6 DG 7 1_555 A K 104 E K K 1_555 A DG 17 A O6 DG 17 1_555 161.7 A DG 11 A O6 DG 11 1_555 A K 104 E K K 1_555 A DG 17 A O6 DG 17 1_555 70.2 A DG 12 A O6 DG 12 1_555 A K 104 E K K 1_555 A DG 17 A O6 DG 17 1_555 96.4 A DG 16 A O6 DG 16 1_555 A K 104 E K K 1_555 A DG 17 A O6 DG 17 1_555 78.2 A DG 6 A O6 DG 6 1_555 A K 104 E K K 1_555 A DG 24 A O6 DG 24 1_555 67.0 A DG 7 A O6 DG 7 1_555 A K 104 E K K 1_555 A DG 24 A O6 DG 24 1_555 128.3 A DG 11 A O6 DG 11 1_555 A K 104 E K K 1_555 A DG 24 A O6 DG 24 1_555 99.6 A DG 12 A O6 DG 12 1_555 A K 104 E K K 1_555 A DG 24 A O6 DG 24 1_555 156.3 A DG 16 A O6 DG 16 1_555 A K 104 E K K 1_555 A DG 24 A O6 DG 24 1_555 97.7 A DG 17 A O6 DG 17 1_555 A K 104 E K K 1_555 A DG 24 A O6 DG 24 1_555 59.8 A DG 6 A O6 DG 6 1_555 A K 104 E K K 1_555 A DG 25 A O6 DG 25 1_555 92.1 A DG 7 A O6 DG 7 1_555 A K 104 E K K 1_555 A DG 25 A O6 DG 25 1_555 80.0 A DG 11 A O6 DG 11 1_555 A K 104 E K K 1_555 A DG 25 A O6 DG 25 1_555 157.9 A DG 12 A O6 DG 12 1_555 A K 104 E K K 1_555 A DG 25 A O6 DG 25 1_555 126.6 A DG 16 A O6 DG 16 1_555 A K 104 E K K 1_555 A DG 25 A O6 DG 25 1_555 72.9 A DG 17 A O6 DG 17 1_555 A K 104 E K K 1_555 A DG 25 A O6 DG 25 1_555 117.8 A DG 24 A O6 DG 24 1_555 A K 104 E K K 1_555 A DG 25 A O6 DG 25 1_555 71.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 4.49 0.30 108.30 112.79 A A A O4' C1' N9 DG DG DG 17 17 17 N 54.28 0.2164 0.1762 0.1780 1.65 29.29 578 12107 12685 4.56 99.07 0.2744 1 FREE R-VALUE 1.34 MOLECULAR REPLACEMENT 33.3362 0.9000 1.1000 GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 1.65 29.29 29 596 36 531 0 0.0066 634 0.8474 983 0.0435 99 0.0057 26 32.6764 246 0.3725 0.3496 1.82 133 2865 96.62 0.2932 0.2438 2.08 143 2984 100.00 0.2396 0.2297 2.63 156 3030 100.00 0.1923 0.1476 29.29 146 3228 99.59 28.11 1.65 48.30 9E8E 12801 1 1 10.6 20.2 100 1.65 1.68 612 0.363 1 refinement PHENIX 1.21.1_5286 model building Coot phasing PHASER data scaling XDS data reduction autoPROC 178 hexagonal P 61 2 2 P 61 2 (x,y,z+5/12) x,y,z x-y,x,z+1/6 y,-x+y,z+5/6 -y,x-y,z+1/3 -x+y,-x,z+2/3 x-y,-y,-z -x,-x+y,-z+2/3 -x,-y,z+1/2 y,x,-z+1/3 -y,-x,-z+5/6 -x+y,y,-z+1/2 x,x-y,-z+1/6 N Hybrid G-quadruplex from Tetrahymena thermophila telomeric sequence in complex with TrisQO Form 2 1 N N 2 N N 3 N N 3 N N 3 N N 4 N N 4 N N 5 N N metalc 2.616 A DG 1 A O6 DG 1 1_555 A K 102 C K K 10_444 metalc 2.359 A DT 2 A OP2 DT 2 1_555 A CA 106 G CA CA 10_444 metalc 2.274 A DT 3 A OP2 DT 3 1_555 A CA 105 F CA CA 1_555 metalc 2.751 A DG 4 A O6 DG 4 1_555 A K 102 C K K 1_555 metalc 2.936 A DG 5 A O6 DG 5 1_555 A K 102 C K K 1_555 metalc 2.753 A DG 5 A O6 DG 5 1_555 A K 103 D K K 1_555 metalc 2.294 A DG 5 A OP1 DG 5 1_555 A CA 105 F CA CA 1_555 metalc 2.809 A DG 6 A O6 DG 6 1_555 A K 103 D K K 1_555 metalc 2.791 A DG 6 A O6 DG 6 1_555 A K 104 E K K 1_555 metalc 2.727 A DG 7 A O6 DG 7 1_555 A K 104 E K K 1_555 metalc 3.060 A DG 10 A O6 DG 10 1_555 A K 102 C K K 1_555 metalc 2.746 A DG 10 A O6 DG 10 1_555 A K 103 D K K 1_555 metalc 2.280 A DG 10 A OP2 DG 10 1_555 A CA 106 G CA CA 1_555 metalc 2.839 A DG 11 A O6 DG 11 1_555 A K 103 D K K 1_555 metalc 2.837 A DG 11 A O6 DG 11 1_555 A K 104 E K K 1_555 metalc 2.760 A DG 12 A O6 DG 12 1_555 A K 104 E K K 1_555 metalc 2.299 A DT 14 A OP1 DT 14 1_555 A CA 105 F CA CA 6_555 metalc 2.690 A DG 16 A O6 DG 16 1_555 A K 104 E K K 1_555 metalc 2.747 A DG 17 A O6 DG 17 1_555 A K 103 D K K 1_555 metalc 2.830 A DG 17 A O6 DG 17 1_555 A K 104 E K K 1_555 metalc 2.247 A DG 17 A OP1 DG 17 1_555 A CA 106 G CA CA 8_545 metalc 2.899 A DG 18 A O6 DG 18 1_555 A K 102 C K K 1_555 metalc 2.803 A DG 18 A O6 DG 18 1_555 A K 103 D K K 1_555 metalc 2.717 A DG 19 A O6 DG 19 1_555 A K 102 C K K 1_555 metalc 2.661 A DG 22 A O6 DG 22 1_555 A K 102 C K K 1_555 metalc 2.848 A DG 23 A O6 DG 23 1_555 A K 102 C K K 1_555 metalc 2.787 A DG 23 A O6 DG 23 1_555 A K 103 D K K 1_555 metalc 2.711 A DG 24 A O6 DG 24 1_555 A K 103 D K K 1_555 metalc 3.047 A DG 24 A O6 DG 24 1_555 A K 104 E K K 1_555 metalc 2.702 A DG 25 A O6 DG 25 1_555 A K 104 E K K 1_555 metalc 2.511 A CA 105 F CA CA 1_555 A HOH 204 H O HOH 5_554 metalc 2.353 A CA 105 F CA CA 1_555 A HOH 205 H O HOH 5_554 metalc 2.337 A CA 105 F CA CA 1_555 A HOH 223 H O HOH 1_555 metalc 2.280 A CA 106 G CA CA 1_555 A HOH 219 H O HOH 10_444 metalc 2.483 A CA 106 G CA CA 1_555 A HOH 226 H O HOH 10_444 hydrog TYPE_6_PAIR A DG 4 A N1 DG 4 1_555 A DG 22 A O6 DG 22 1_555 hydrog TYPE_6_PAIR A DG 4 A N2 DG 4 1_555 A DG 22 A N7 DG 22 1_555 hydrog TYPE_6_PAIR A DG 5 A N1 DG 5 1_555 A DG 10 A O6 DG 10 1_555 hydrog TYPE_6_PAIR A DG 5 A N2 DG 5 1_555 A DG 10 A N7 DG 10 1_555 hydrog TYPE_6_PAIR A DG 5 A N7 DG 5 1_555 A DG 23 A N2 DG 23 1_555 hydrog TYPE_6_PAIR A DG 5 A O6 DG 5 1_555 A DG 23 A N1 DG 23 1_555 hydrog TYPE_6_PAIR A DG 6 A N1 DG 6 1_555 A DG 11 A O6 DG 11 1_555 hydrog TYPE_6_PAIR A DG 6 A N2 DG 6 1_555 A DG 11 A N7 DG 11 1_555 hydrog TYPE_6_PAIR A DG 6 A N7 DG 6 1_555 A DG 24 A N2 DG 24 1_555 hydrog TYPE_6_PAIR A DG 6 A O6 DG 6 1_555 A DG 24 A N1 DG 24 1_555 hydrog TYPE_6_PAIR A DG 7 A N1 DG 7 1_555 A DG 12 A O6 DG 12 1_555 hydrog TYPE_6_PAIR A DG 7 A N2 DG 7 1_555 A DG 12 A N7 DG 12 1_555 hydrog TYPE_6_PAIR A DG 7 A N7 DG 7 1_555 A DG 25 A N2 DG 25 1_555 hydrog TYPE_6_PAIR A DG 7 A O6 DG 7 1_555 A DG 25 A N1 DG 25 1_555 hydrog TYPE_6_PAIR A DG 10 A N1 DG 10 1_555 A DG 18 A O6 DG 18 1_555 hydrog TYPE_6_PAIR A DG 10 A N2 DG 10 1_555 A DG 18 A N7 DG 18 1_555 hydrog TYPE_6_PAIR A DG 11 A N1 DG 11 1_555 A DG 17 A O6 DG 17 1_555 hydrog TYPE_6_PAIR A DG 11 A N2 DG 11 1_555 A DG 17 A N7 DG 17 1_555 hydrog TYPE_6_PAIR A DG 12 A N1 DG 12 1_555 A DG 16 A O6 DG 16 1_555 hydrog TYPE_6_PAIR A DG 12 A N2 DG 12 1_555 A DG 16 A N7 DG 16 1_555 hydrog TYPE_6_PAIR A DG 16 A N1 DG 16 1_555 A DG 25 A O6 DG 25 1_555 hydrog TYPE_6_PAIR A DG 16 A N2 DG 16 1_555 A DG 25 A N7 DG 25 1_555 hydrog TYPE_6_PAIR A DG 17 A N1 DG 17 1_555 A DG 24 A O6 DG 24 1_555 hydrog TYPE_6_PAIR A DG 17 A N2 DG 17 1_555 A DG 24 A N7 DG 24 1_555 hydrog TYPE_6_PAIR A DG 18 A N1 DG 18 1_555 A DG 23 A O6 DG 23 1_555 hydrog TYPE_6_PAIR A DG 18 A N2 DG 18 1_555 A DG 23 A N7 DG 23 1_555 hydrog TYPE_6_PAIR A DG 19 A N7 DG 19 1_555 A DG 22 A N2 DG 22 1_555 hydrog TYPE_6_PAIR A DG 19 A O6 DG 19 1_555 A DG 22 A N1 DG 22 1_555 DNA G-quadruplex, TrisQO, DNA, hybrid 9E8E PDB 1 1 9E8E 1 25 9E8E 1 25 9E8E A 1 1 25 178 P 61 2 2 P 61 2 (x,y,z+5/12)