0.011015 0.000000 0.000000 0.000000 0.009378 0.000000 0.000000 0.000000 0.005338 0.00000 0.00000 0.00000 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 6.96715 11.43723 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 7.96527 9.05267 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.51135 5.44231 1.42069 35.72801 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.55732 6.39887 1.23737 29.19336 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0009-0001-3907-431X Ojha, M. 0000-0001-6424-3173 Koirala, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 90.785 106.630 187.331 1813439.865 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N O N 112 N P N 113 N O N 114 N O N 115 N O N 116 N C N 117 R C N 118 N O N 119 S C N 120 N O N 121 R C N 122 N O N 123 R C N 124 N N N 125 N C N 126 N O N 127 N N N 128 N C N 129 N N N 130 N C N 131 N C N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 R C N 148 N C N 149 N O N 150 N C N 151 N S N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N O N 161 N P N 162 N O N 163 N O N 164 N O N 165 N C N 166 R C N 167 N O N 168 S C N 169 N O N 170 R C N 171 N O N 172 R C Y 173 N N Y 174 N C Y 175 N N Y 176 N C N 177 N C N 178 N O N 179 N N N 180 N C N 181 N N N 182 N N Y 183 N C N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N N N 199 S C N 200 N C N 201 N O N 202 N C N 203 N C N 204 N C N 205 N O N 206 N N N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N N N 219 S C N 220 N C N 221 N O N 222 N C N 223 N C N 224 N C N 225 N O N 226 N O N 227 N O N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 N C N 239 N C N 240 N O N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C Y 252 N C Y 253 N N Y 254 N C Y 255 N C Y 256 N N N 257 N O N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 S C N 273 N C N 274 N C N 275 N C N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N C N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N C N 318 N C N 319 N C N 320 N N N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C N 342 N C N 343 N S N 344 N C N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N N N 358 S C N 359 N C N 360 N O N 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N C N 386 N C N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N N N 398 S C N 399 N C N 400 N O N 401 N C N 402 N O N 403 N O N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N N N 412 S C N 413 N C N 414 N O N 415 R C N 416 N O N 417 N C N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N N N 429 S C N 430 N C N 431 N O N 432 N C Y 433 N C Y 434 N C Y 435 N C Y 436 N N Y 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C N 442 N O N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N N N 456 S C N 457 N C N 458 N O N 459 N C Y 460 N C Y 461 N C Y 462 N C Y 463 N C Y 464 N C Y 465 N C N 466 N O N 467 N O N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N O N 480 N P N 481 N O N 482 N O N 483 N O N 484 N C N 485 R C N 486 N O N 487 S C N 488 N O N 489 R C N 490 N O N 491 R C N 492 N N N 493 N C N 494 N O N 495 N N N 496 N C N 497 N O N 498 N C N 499 N C N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N N N 514 S C N 515 N C N 516 N O N 517 N C N 518 N C N 519 N C N 520 N O N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing Y 182 N sing Y 183 N sing Y 184 N doub N 185 N sing Y 186 N sing N 187 N sing Y 188 N doub N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N doub N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N doub N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing Y 255 N sing Y 256 N doub Y 257 N doub N 258 N sing Y 259 N sing N 260 N sing Y 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N sing N 358 N sing N 359 N sing N 360 N sing Y 361 N doub Y 362 N sing Y 363 N sing N 364 N sing Y 365 N doub N 366 N sing Y 367 N doub N 368 N sing Y 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N doub N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N doub N 426 N sing N 427 N sing N 428 N sing N 429 N sing Y 430 N doub Y 431 N sing Y 432 N sing N 433 N sing Y 434 N doub Y 435 N sing Y 436 N sing N 437 N sing Y 438 N sing Y 439 N doub N 440 N sing Y 441 N doub N 442 N sing Y 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N doub N 454 N sing N 455 N sing N 456 N sing N 457 N sing Y 458 N doub Y 459 N sing Y 460 N sing N 461 N sing Y 462 N doub N 463 N sing Y 464 N doub N 465 N sing Y 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N doub N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N doub N 498 N sing N 499 N sing N 500 N sing N 501 N doub N 502 N sing N 503 N doub N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N doub N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing To Be Published 0353 Crystal structure of HIV-1 RRE SLII G34C mutant in complex with Fab BL3-6 0009-0001-3907-431X 0000-0001-6424-3173 10.2210/pdb9e7g/pdb pdb_00009e7g 100 Liquid nitrogen 1 N PIXEL 2024-10-05 DECTRIS EIGER X 16M SINGLE WAVELENGTH M x-ray 1 0.97934 1.0 17-ID-2 NSLS-II 0.97934 SYNCHROTRON NSLS-II BEAMLINE 17-ID-2 24766.615 BL3-6 Fab heavy chain 1 man polymer 23394.891 BL3-6 Fab light chain 1 man polymer 23221.883 Rev Response Element SLII G34C 1 syn polymer no no EISEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKN TAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT EISEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKN TAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT H polypeptide(L) no no SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQ PEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQ PEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC L polypeptide(L) no no GGCACUAUGGGCGCAGCGUCAAUGACGCUGACGCUACAGGCCAGACAAGAAACACUUGUCUGAUAUAGUGCC GGCACUAUGGGCGCAGCGUCAAUGACGCUGACGCUACAGGCCAGACAAGAAACACUUGUCUGAUAUAGUGCC R polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 233 9606 Homo sapiens 562 Escherichia coli Biological sequence sample 1 215 9606 Homo sapiens 562 Escherichia coli Biological sequence 1 3.18 61.27 VAPOR DIFFUSION, SITTING DROP 8.8 0.02 M Citric acid, 0.08 M BIS-TRIS propane pH 8.8, 16% PEG 3350 and 0.3% Ethanol 298 -11.965 1 19 R 1 R 72 2.052 R_G1:C72_R 1 -18.686 -1.334 -0.100 -0.384 -4.950 1 19 R 2 R 71 5.166 R_G2:C71_R 2 -15.502 -0.999 0.138 -0.301 -1.831 1 19 R 3 R 70 2.304 R_C3:G70_R 3 -7.808 1.169 0.126 -0.527 3.450 1 20 R 4 R 69 0.020 R_A4:U69_R 4 -13.500 -0.285 0.433 -0.381 0.677 1 19 R 5 R 68 -1.780 R_C5:G68_R 5 -13.817 0.779 0.390 -0.465 0.491 1 20 R 6 R 67 -3.478 R_U6:A67_R 6 -11.270 0.271 -0.031 -0.191 -15.010 1 20 R 7 R 66 4.180 R_A7:U66_R 7 -16.057 0.475 -0.157 -0.209 3.840 1 20 R 8 R 65 1.249 R_U8:A65_R 8 -12.773 0.319 0.269 -0.305 -24.246 1 19 R 9 R 37 -14.243 R_G9:C37_R 9 -35.864 -0.712 0.739 -0.858 -29.212 1 8 R 10 R 36 -8.139 R_G10:A36_R 10 -11.727 -0.965 1.739 0.720 4.050 1 19 R 11 R 34 2.581 R_G11:C34_R 11 -14.828 -1.316 -0.035 -0.377 0.045 1 19 R 12 R 33 -1.802 R_C12:G33_R 12 -14.287 1.477 0.339 -0.493 -2.284 1 19 R 13 R 32 1.555 R_G13:C32_R 13 -14.903 -1.320 0.074 -0.549 -8.269 1 19 R 14 R 30 0.663 R_C14:G30_R 14 -17.930 0.995 0.439 -0.514 3.823 1 20 R 15 R 29 -0.934 R_A15:U29_R 15 -20.914 -0.329 0.530 -0.196 -8.966 1 19 R 16 R 28 -3.742 R_G16:C28_R 16 -20.075 1.028 0.310 -0.134 10.070 1 19 R 17 R 27 -3.151 R_C17:G27_R 17 -13.607 1.202 0.055 -0.494 -8.445 1 19 R 18 R 26 3.209 R_G18:C26_R 18 -19.851 -1.200 -0.308 -0.556 -12.636 1 20 R 19 R 25 0.395 R_U19:A25_R 19 -15.418 0.563 -0.066 -0.284 5.700 1 19 R 20 R 24 -2.628 R_C20:G24_R 20 3.864 0.669 -0.585 -0.201 17.739 3 23 R 21 R 23 61.144 R_A21:U23_R 21 -10.712 0.878 -0.903 -3.787 -1.850 1 19 R 42 R 62 5.875 R_C42:G62_R 22 -11.641 0.737 0.229 -0.076 -3.414 1 20 R 43 R 61 2.529 R_A43:U61_R 23 -10.384 0.227 0.026 -0.042 -1.138 1 19 R 44 R 60 6.446 R_G44:C60_R 24 -6.296 -0.450 -0.165 -0.026 -2.961 1 20 R 45 R 59 0.524 R_A45:U59_R 25 -8.013 0.055 -0.054 -0.044 1.753 1 19 R 46 R 58 2.911 R_C46:G58_R 26 -9.806 0.384 0.167 0.082 -3.271 1 20 R 47 R 57 5.727 R_A47:U57_R 27 -1.601 0.500 -0.026 -0.055 -0.181 1 20 R 48 R 56 -1.276 R_A48:U56_R 28 -1.091 0.358 -0.037 -0.091 -13.791 1 19 R 49 R 55 -0.312 R_G49:C55_R 29 -30.900 -0.041 -0.217 -0.277 -34.568 6 R 51 R 54 -79.515 R_A51:A54_R 30 -0.054 2.400 1.378 -4.198 3.226 33.293 R R 1 2 -0.358 R R 72 71 3.237 -0.204 -0.198 -1.580 RR_G1G2:C71C72_RR 1 -6.419 11.271 32.685 -2.723 -0.722 3.301 43.534 R R 2 3 -0.513 R R 71 70 3.294 -0.380 0.153 -1.394 RR_G2C3:G70C71_RR 2 -1.093 1.474 43.519 -1.843 -0.313 1.122 22.465 R R 3 4 35.603 R R 70 69 2.692 13.019 0.016 -1.879 RR_C3A4:U69G70_RR 3 0.936 -2.559 18.324 -7.916 0.180 3.142 38.671 R R 4 5 4.533 R R 69 68 3.236 2.999 0.184 -1.170 RR_A4C5:G68U69_RR 4 0.586 -0.885 38.555 -2.126 -0.208 2.450 34.125 R R 5 6 18.195 R R 68 67 3.009 10.459 0.232 -1.388 RR_C5U6:A67G68_RR 5 6.039 -10.506 31.976 -3.797 0.432 2.604 36.485 R R 6 7 26.876 R R 67 66 3.598 16.270 -0.147 -1.466 RR_U6A7:U66A67_RR 6 0.492 -0.813 32.764 -4.601 0.304 2.679 21.654 R R 7 8 8.008 R R 66 65 2.930 2.999 -0.038 -1.631 RR_A7U8:A65U66_RR 7 0.224 -0.598 21.447 -5.367 0.177 3.284 30.548 R R 9 10 -5.597 R R 37 36 3.205 -2.927 0.022 -1.635 RR_G9G10:A36C37_RR 8 -5.819 11.126 29.862 -2.520 -1.200 3.019 40.532 R R 10 11 6.693 R R 36 34 4.422 4.477 2.092 -0.446 RR_G10G11:C34A36_RR 9 -18.020 26.939 36.189 -1.248 -5.452 3.264 53.047 R R 11 12 0.974 R R 34 33 3.299 0.869 0.190 -1.659 RR_G11C12:G33C34_RR 10 -2.061 2.308 53.003 -1.914 -0.345 1.747 21.272 R R 12 13 28.388 R R 33 32 2.891 10.034 0.251 -1.737 RR_C12G13:C32G33_RR 11 2.932 -8.294 18.552 -7.841 0.237 3.540 47.712 R R 13 14 -2.576 R R 32 30 3.492 -2.083 0.171 -1.190 RR_G13C14:G30C32_RR 12 0.878 -1.086 47.661 -1.292 -0.136 1.247 26.171 R R 14 15 41.979 R R 30 29 2.614 17.417 -0.361 -1.106 RR_C14A15:U29G30_RR 13 -0.808 1.948 19.594 -5.650 0.648 3.453 42.244 R R 15 16 0.719 R R 29 28 3.475 0.518 -0.103 -1.220 RR_A15G16:C28U29_RR 14 1.890 -2.624 42.200 -1.749 0.348 2.981 31.480 R R 16 17 -9.270 R R 28 27 2.826 -5.009 0.471 -1.149 RR_G16C17:G27C28_RR 15 0.788 -1.459 31.079 -1.282 -0.737 3.116 21.427 R R 17 18 16.615 R R 27 26 3.765 6.083 0.085 -1.731 RR_C17G18:C26G27_RR 16 2.181 -5.958 20.440 -7.316 0.725 3.206 44.383 R R 18 19 0.625 R R 26 25 3.204 0.472 -0.538 -1.183 RR_G18U19:A25C26_RR 17 -1.319 1.746 44.362 -1.610 0.592 2.618 26.998 R R 19 20 7.154 R R 25 24 2.796 3.324 -0.075 -1.057 RR_U19C20:G24A25_RR 18 3.337 -7.184 26.591 -2.970 0.870 -1.233 -171.482 R R 20 21 17.550 R R 24 23 -2.394 -34.330 0.116 3.024 RR_C20A21:U23G24_RR 19 164.999 84.351 -83.967 -1.680 -0.732 2.324 31.028 R R 42 43 21.422 R R 62 61 3.077 11.212 -0.426 -1.580 RR_C42A43:U61G62_RR 20 -0.350 0.668 28.976 -4.798 0.738 2.418 30.945 R R 43 44 18.944 R R 61 60 3.077 9.936 0.047 -1.598 RR_A43G44:C60U61_RR 21 -0.504 0.962 29.339 -4.655 -0.172 2.992 34.278 R R 44 45 8.298 R R 60 59 3.200 4.873 -0.487 -1.427 RR_G44A45:U59C60_RR 22 -1.608 2.739 33.903 -3.149 0.586 3.175 32.447 R R 45 46 3.015 R R 59 58 3.253 1.684 0.381 -1.380 RR_A45C46:G58U59_RR 23 -0.369 0.661 32.402 -2.761 -0.746 2.465 35.697 R R 46 47 21.315 R R 58 57 3.212 12.793 -0.063 -1.567 RR_C46A47:U57G58_RR 24 0.047 -0.078 33.396 -4.220 0.108 2.605 30.179 R R 47 48 15.155 R R 57 56 3.061 7.803 -0.591 -1.482 RR_A47A48:U56U57_RR 25 -1.077 2.091 29.155 -4.246 0.941 3.489 32.934 R R 48 49 8.580 R R 56 55 3.803 4.835 -0.038 -1.685 RR_A48G49:C55U56_RR 26 4.198 -7.449 32.323 -3.899 0.872 1.763 179.707 R R 49 51 -57.935 R R 55 54 1.875 -115.860 2.553 -1.407 RR_G49A51:A54C55_RR 27 -133.957 66.984 168.365 -0.643 -1.346 repository Initial release 1 0 2025-05-28 United States National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) U54AI170660-01/SUBK00019302 dkoirala@umbc.edu 0000-0001-6424-3173 Deepak Koirala principal investigator/group leader N RCSB Y RCSB 2024-11-01 REL REL 11676 Human immunodeficiency virus 1 sample 1 72 Y 8T29 PDB experimental model H CYS 25 Disulfide bridge SG A CYS 25 H CYS 99 SG A CYS 99 1_555 1_555 None H CYS 152 Disulfide bridge SG A CYS 152 H CYS 208 SG A CYS 208 1_555 1_555 None L CYS 24 Disulfide bridge SG B CYS 24 L CYS 89 SG B CYS 89 1_555 1_555 None L CYS 135 Disulfide bridge SG B CYS 135 L CYS 195 SG B CYS 195 1_555 1_555 None n 1 1 H n 2 2 H SER 3 n 3 SER 3 H GLU 4 n 4 GLU 4 H VAL 5 n 5 VAL 5 H GLN 6 n 6 GLN 6 H LEU 7 n 7 LEU 7 H VAL 8 n 8 VAL 8 H GLU 9 n 9 GLU 9 H SER 10 n 10 SER 10 H GLY 11 n 11 GLY 11 H GLY 12 n 12 GLY 12 H GLY 13 n 13 GLY 13 H LEU 14 n 14 LEU 14 H VAL 15 n 15 VAL 15 H GLN 16 n 16 GLN 16 H PRO 17 n 17 PRO 17 H GLY 18 n 18 GLY 18 H GLY 19 n 19 GLY 19 H SER 20 n 20 SER 20 H LEU 21 n 21 LEU 21 H ARG 22 n 22 ARG 22 H LEU 23 n 23 LEU 23 H SER 24 n 24 SER 24 H CYS 25 n 25 CYS 25 H ALA 26 n 26 ALA 26 H ALA 27 n 27 ALA 27 H SER 28 n 28 SER 28 H GLY 29 n 29 GLY 29 H PHE 30 n 30 PHE 30 H TYR 31 n 31 TYR 31 H ILE 32 n 32 ILE 32 H SER 33 n 33 SER 33 H TYR 34 n 34 TYR 34 H SER 35 n 35 SER 35 H SER 36 n 36 SER 36 H ILE 37 n 37 ILE 37 H HIS 38 n 38 HIS 38 H TRP 39 n 39 TRP 39 H VAL 40 n 40 VAL 40 H ARG 41 n 41 ARG 41 H GLN 42 n 42 GLN 42 H ALA 43 n 43 ALA 43 H PRO 44 n 44 PRO 44 H GLY 45 n 45 GLY 45 H LYS 46 n 46 LYS 46 H GLY 47 n 47 GLY 47 H LEU 48 n 48 LEU 48 H GLU 49 n 49 GLU 49 H TRP 50 n 50 TRP 50 H VAL 51 n 51 VAL 51 H ALA 52 n 52 ALA 52 H SER 53 n 53 SER 53 H ILE 54 n 54 ILE 54 H SER 55 n 55 SER 55 H PRO 56 n 56 PRO 56 H TYR 57 n 57 TYR 57 H SER 58 n 58 SER 58 H GLY 59 n 59 GLY 59 H SER 60 n 60 SER 60 H THR 61 n 61 THR 61 H TYR 62 n 62 TYR 62 H TYR 63 n 63 TYR 63 H ALA 64 n 64 ALA 64 H ASP 65 n 65 ASP 65 H SER 66 n 66 SER 66 H VAL 67 n 67 VAL 67 H LYS 68 n 68 LYS 68 H GLY 69 n 69 GLY 69 H ARG 70 n 70 ARG 70 H PHE 71 n 71 PHE 71 H THR 72 n 72 THR 72 H ILE 73 n 73 ILE 73 H SER 74 n 74 SER 74 H ALA 75 n 75 ALA 75 H ASP 76 n 76 ASP 76 H THR 77 n 77 THR 77 H SER 78 n 78 SER 78 H LYS 79 n 79 LYS 79 H ASN 80 n 80 ASN 80 H THR 81 n 81 THR 81 H ALA 82 n 82 ALA 82 H TYR 83 n 83 TYR 83 H LEU 84 n 84 LEU 84 H GLN 85 n 85 GLN 85 H MET 86 n 86 MET 86 H ASN 87 n 87 ASN 87 H SER 88 n 88 SER 88 H LEU 89 n 89 LEU 89 H ARG 90 n 90 ARG 90 H ALA 91 n 91 ALA 91 H GLU 92 n 92 GLU 92 H ASP 93 n 93 ASP 93 H THR 94 n 94 THR 94 H ALA 95 n 95 ALA 95 H VAL 96 n 96 VAL 96 H TYR 97 n 97 TYR 97 H TYR 98 n 98 TYR 98 H CYS 99 n 99 CYS 99 H ALA 100 n 100 ALA 100 H ARG 101 n 101 ARG 101 H GLN 102 n 102 GLN 102 H GLY 103 n 103 GLY 103 H TYR 104 n 104 TYR 104 H ARG 105 n 105 ARG 105 H ARG 106 n 106 ARG 106 H ARG 107 n 107 ARG 107 H SER 108 n 108 SER 108 H GLY 109 n 109 GLY 109 H ARG 110 n 110 ARG 110 H GLY 111 n 111 GLY 111 H PHE 112 n 112 PHE 112 H ASP 113 n 113 ASP 113 H TYR 114 n 114 TYR 114 H TRP 115 n 115 TRP 115 H GLY 116 n 116 GLY 116 H GLN 117 n 117 GLN 117 H GLY 118 n 118 GLY 118 H THR 119 n 119 THR 119 H LEU 120 n 120 LEU 120 H VAL 121 n 121 VAL 121 H THR 122 n 122 THR 122 H VAL 123 n 123 VAL 123 H SER 124 n 124 SER 124 H SER 125 n 125 SER 125 H ALA 126 n 126 ALA 126 H SER 127 n 127 SER 127 H THR 128 n 128 THR 128 H LYS 129 n 129 LYS 129 H GLY 130 n 130 GLY 130 H PRO 131 n 131 PRO 131 H SER 132 n 132 SER 132 H VAL 133 n 133 VAL 133 H PHE 134 n 134 PHE 134 H PRO 135 n 135 PRO 135 H LEU 136 n 136 LEU 136 H ALA 137 n 137 ALA 137 H PRO 138 n 138 PRO 138 H SER 139 n 139 SER 139 H SER 140 n 140 SER 140 H LYS 141 n 141 LYS 141 H SER 142 n 142 SER 142 H THR 143 n 143 THR 143 H SER 144 n 144 SER 144 H GLY 145 n 145 GLY 145 H GLY 146 n 146 GLY 146 H THR 147 n 147 THR 147 H ALA 148 n 148 ALA 148 H ALA 149 n 149 ALA 149 H LEU 150 n 150 LEU 150 H GLY 151 n 151 GLY 151 H CYS 152 n 152 CYS 152 H LEU 153 n 153 LEU 153 H VAL 154 n 154 VAL 154 H LYS 155 n 155 LYS 155 H ASP 156 n 156 ASP 156 H TYR 157 n 157 TYR 157 H PHE 158 n 158 PHE 158 H PRO 159 n 159 PRO 159 H GLU 160 n 160 GLU 160 H PRO 161 n 161 PRO 161 H VAL 162 n 162 VAL 162 H THR 163 n 163 THR 163 H VAL 164 n 164 VAL 164 H SER 165 n 165 SER 165 H TRP 166 n 166 TRP 166 H ASN 167 n 167 ASN 167 H SER 168 n 168 SER 168 H GLY 169 n 169 GLY 169 H ALA 170 n 170 ALA 170 H LEU 171 n 171 LEU 171 H THR 172 n 172 THR 172 H SER 173 n 173 SER 173 H GLY 174 n 174 GLY 174 H VAL 175 n 175 VAL 175 H HIS 176 n 176 HIS 176 H THR 177 n 177 THR 177 H PHE 178 n 178 PHE 178 H PRO 179 n 179 PRO 179 H ALA 180 n 180 ALA 180 H VAL 181 n 181 VAL 181 H LEU 182 n 182 LEU 182 H GLN 183 n 183 GLN 183 H SER 184 n 184 SER 184 H SER 185 n 185 SER 185 H GLY 186 n 186 GLY 186 H LEU 187 n 187 LEU 187 H TYR 188 n 188 TYR 188 H SER 189 n 189 SER 189 H LEU 190 n 190 LEU 190 H SER 191 n 191 SER 191 H SER 192 n 192 SER 192 H VAL 193 n 193 VAL 193 H VAL 194 n 194 VAL 194 H THR 195 n 195 THR 195 H VAL 196 n 196 VAL 196 H PRO 197 n 197 PRO 197 H SER 198 n 198 SER 198 H SER 199 n 199 SER 199 H SER 200 n 200 SER 200 H LEU 201 n 201 LEU 201 H GLY 202 n 202 GLY 202 H THR 203 n 203 THR 203 H GLN 204 n 204 GLN 204 H THR 205 n 205 THR 205 H TYR 206 n 206 TYR 206 H ILE 207 n 207 ILE 207 H CYS 208 n 208 CYS 208 H ASN 209 n 209 ASN 209 H VAL 210 n 210 VAL 210 H ASN 211 n 211 ASN 211 H HIS 212 n 212 HIS 212 H LYS 213 n 213 LYS 213 H PRO 214 n 214 PRO 214 H SER 215 n 215 SER 215 H ASN 216 n 216 ASN 216 H THR 217 n 217 THR 217 H LYS 218 n 218 LYS 218 H VAL 219 n 219 VAL 219 H ASP 220 n 220 ASP 220 H LYS 221 n 221 LYS 221 H LYS 222 n 222 LYS 222 H VAL 223 n 223 VAL 223 H GLU 224 n 224 GLU 224 H PRO 225 n 225 PRO 225 H LYS 226 n 226 LYS 226 H SER 227 n 227 SER 227 H CYS 228 n 228 CYS 228 H n 229 229 H n 230 230 H n 231 231 H n 232 232 H n 233 233 H SER 1 n 1 SER 1 L ASP 2 n 2 ASP 2 L ILE 3 n 3 ILE 3 L GLN 4 n 4 GLN 4 L MET 5 n 5 MET 5 L THR 6 n 6 THR 6 L GLN 7 n 7 GLN 7 L SER 8 n 8 SER 8 L PRO 9 n 9 PRO 9 L SER 10 n 10 SER 10 L SER 11 n 11 SER 11 L LEU 12 n 12 LEU 12 L SER 13 n 13 SER 13 L ALA 14 n 14 ALA 14 L SER 15 n 15 SER 15 L VAL 16 n 16 VAL 16 L GLY 17 n 17 GLY 17 L ASP 18 n 18 ASP 18 L ARG 19 n 19 ARG 19 L VAL 20 n 20 VAL 20 L THR 21 n 21 THR 21 L ILE 22 n 22 ILE 22 L THR 23 n 23 THR 23 L CYS 24 n 24 CYS 24 L ARG 25 n 25 ARG 25 L ALA 26 n 26 ALA 26 L SER 27 n 27 SER 27 L GLN 28 n 28 GLN 28 L SER 29 n 29 SER 29 L VAL 30 n 30 VAL 30 L SER 31 n 31 SER 31 L SER 32 n 32 SER 32 L ALA 33 n 33 ALA 33 L VAL 34 n 34 VAL 34 L ALA 35 n 35 ALA 35 L TRP 36 n 36 TRP 36 L TYR 37 n 37 TYR 37 L GLN 38 n 38 GLN 38 L GLN 39 n 39 GLN 39 L LYS 40 n 40 LYS 40 L PRO 41 n 41 PRO 41 L GLY 42 n 42 GLY 42 L LYS 43 n 43 LYS 43 L ALA 44 n 44 ALA 44 L PRO 45 n 45 PRO 45 L LYS 46 n 46 LYS 46 L LEU 47 n 47 LEU 47 L LEU 48 n 48 LEU 48 L ILE 49 n 49 ILE 49 L TYR 50 n 50 TYR 50 L SER 51 n 51 SER 51 L ALA 52 n 52 ALA 52 L SER 53 n 53 SER 53 L SER 54 n 54 SER 54 L LEU 55 n 55 LEU 55 L TYR 56 n 56 TYR 56 L SER 57 n 57 SER 57 L GLY 58 n 58 GLY 58 L VAL 59 n 59 VAL 59 L PRO 60 n 60 PRO 60 L SER 61 n 61 SER 61 L ARG 62 n 62 ARG 62 L PHE 63 n 63 PHE 63 L SER 64 n 64 SER 64 L GLY 65 n 65 GLY 65 L SER 66 n 66 SER 66 L ARG 67 n 67 ARG 67 L SER 68 n 68 SER 68 L GLY 69 n 69 GLY 69 L THR 70 n 70 THR 70 L ASP 71 n 71 ASP 71 L PHE 72 n 72 PHE 72 L THR 73 n 73 THR 73 L LEU 74 n 74 LEU 74 L THR 75 n 75 THR 75 L ILE 76 n 76 ILE 76 L SER 77 n 77 SER 77 L SER 78 n 78 SER 78 L LEU 79 n 79 LEU 79 L GLN 80 n 80 GLN 80 L PRO 81 n 81 PRO 81 L GLU 82 n 82 GLU 82 L ASP 83 n 83 ASP 83 L PHE 84 n 84 PHE 84 L ALA 85 n 85 ALA 85 L THR 86 n 86 THR 86 L TYR 87 n 87 TYR 87 L TYR 88 n 88 TYR 88 L CYS 89 n 89 CYS 89 L GLN 90 n 90 GLN 90 L GLN 91 n 91 GLN 91 L SER 92 n 92 SER 92 L TYR 93 n 93 TYR 93 L SER 94 n 94 SER 94 L PHE 95 n 95 PHE 95 L PRO 96 n 96 PRO 96 L SER 97 n 97 SER 97 L THR 98 n 98 THR 98 L PHE 99 n 99 PHE 99 L GLY 100 n 100 GLY 100 L GLN 101 n 101 GLN 101 L GLY 102 n 102 GLY 102 L THR 103 n 103 THR 103 L LYS 104 n 104 LYS 104 L VAL 105 n 105 VAL 105 L GLU 106 n 106 GLU 106 L ILE 107 n 107 ILE 107 L LYS 108 n 108 LYS 108 L ARG 109 n 109 ARG 109 L THR 110 n 110 THR 110 L VAL 111 n 111 VAL 111 L ALA 112 n 112 ALA 112 L ALA 113 n 113 ALA 113 L PRO 114 n 114 PRO 114 L SER 115 n 115 SER 115 L VAL 116 n 116 VAL 116 L PHE 117 n 117 PHE 117 L ILE 118 n 118 ILE 118 L PHE 119 n 119 PHE 119 L PRO 120 n 120 PRO 120 L PRO 121 n 121 PRO 121 L SER 122 n 122 SER 122 L ASP 123 n 123 ASP 123 L GLU 124 n 124 GLU 124 L GLN 125 n 125 GLN 125 L LEU 126 n 126 LEU 126 L LYS 127 n 127 LYS 127 L SER 128 n 128 SER 128 L GLY 129 n 129 GLY 129 L THR 130 n 130 THR 130 L ALA 131 n 131 ALA 131 L SER 132 n 132 SER 132 L VAL 133 n 133 VAL 133 L VAL 134 n 134 VAL 134 L CYS 135 n 135 CYS 135 L LEU 136 n 136 LEU 136 L LEU 137 n 137 LEU 137 L ASN 138 n 138 ASN 138 L ASN 139 n 139 ASN 139 L PHE 140 n 140 PHE 140 L TYR 141 n 141 TYR 141 L PRO 142 n 142 PRO 142 L ARG 143 n 143 ARG 143 L GLU 144 n 144 GLU 144 L ALA 145 n 145 ALA 145 L LYS 146 n 146 LYS 146 L VAL 147 n 147 VAL 147 L GLN 148 n 148 GLN 148 L TRP 149 n 149 TRP 149 L LYS 150 n 150 LYS 150 L VAL 151 n 151 VAL 151 L ASP 152 n 152 ASP 152 L ASN 153 n 153 ASN 153 L ALA 154 n 154 ALA 154 L LEU 155 n 155 LEU 155 L GLN 156 n 156 GLN 156 L SER 157 n 157 SER 157 L GLY 158 n 158 GLY 158 L ASN 159 n 159 ASN 159 L SER 160 n 160 SER 160 L GLN 161 n 161 GLN 161 L GLU 162 n 162 GLU 162 L SER 163 n 163 SER 163 L VAL 164 n 164 VAL 164 L THR 165 n 165 THR 165 L GLU 166 n 166 GLU 166 L GLN 167 n 167 GLN 167 L ASP 168 n 168 ASP 168 L SER 169 n 169 SER 169 L LYS 170 n 170 LYS 170 L ASP 171 n 171 ASP 171 L SER 172 n 172 SER 172 L THR 173 n 173 THR 173 L TYR 174 n 174 TYR 174 L SER 175 n 175 SER 175 L LEU 176 n 176 LEU 176 L SER 177 n 177 SER 177 L SER 178 n 178 SER 178 L THR 179 n 179 THR 179 L LEU 180 n 180 LEU 180 L THR 181 n 181 THR 181 L LEU 182 n 182 LEU 182 L SER 183 n 183 SER 183 L LYS 184 n 184 LYS 184 L ALA 185 n 185 ALA 185 L ASP 186 n 186 ASP 186 L TYR 187 n 187 TYR 187 L GLU 188 n 188 GLU 188 L LYS 189 n 189 LYS 189 L HIS 190 n 190 HIS 190 L LYS 191 n 191 LYS 191 L VAL 192 n 192 VAL 192 L TYR 193 n 193 TYR 193 L ALA 194 n 194 ALA 194 L CYS 195 n 195 CYS 195 L GLU 196 n 196 GLU 196 L VAL 197 n 197 VAL 197 L THR 198 n 198 THR 198 L HIS 199 n 199 HIS 199 L GLN 200 n 200 GLN 200 L GLY 201 n 201 GLY 201 L LEU 202 n 202 LEU 202 L SER 203 n 203 SER 203 L SER 204 n 204 SER 204 L PRO 205 n 205 PRO 205 L VAL 206 n 206 VAL 206 L THR 207 n 207 THR 207 L LYS 208 n 208 LYS 208 L SER 209 n 209 SER 209 L PHE 210 n 210 PHE 210 L ASN 211 n 211 ASN 211 L ARG 212 n 212 ARG 212 L GLY 213 n 213 GLY 213 L GLU 214 n 214 GLU 214 L CYS 215 n 215 CYS 215 L G 1 n 1 G 1 R G 2 n 2 G 2 R C 3 n 3 C 3 R A 4 n 4 A 4 R C 5 n 5 C 5 R U 6 n 6 U 6 R A 7 n 7 A 7 R U 8 n 8 U 8 R G 9 n 9 G 9 R G 10 n 10 G 10 R G 11 n 11 G 11 R C 12 n 12 C 12 R G 13 n 13 G 13 R C 14 n 14 C 14 R A 15 n 15 A 15 R G 16 n 16 G 16 R C 17 n 17 C 17 R G 18 n 18 G 18 R U 19 n 19 U 19 R C 20 n 20 C 20 R A 21 n 21 A 21 R A 22 n 22 A 22 R U 23 n 23 U 23 R G 24 n 24 G 24 R A 25 n 25 A 25 R C 26 n 26 C 26 R G 27 n 27 G 27 R C 28 n 28 C 28 R U 29 n 29 U 29 R G 30 n 30 G 30 R A 31 n 31 A 31 R C 32 n 32 C 32 R G 33 n 33 G 33 R C 34 n 34 C 34 R U 35 n 35 U 35 R A 36 n 36 A 36 R C 37 n 37 C 37 R A 38 n 38 A 38 R G 39 n 39 G 39 R G 40 n 40 G 40 R C 41 n 41 C 41 R C 42 n 42 C 42 R A 43 n 43 A 43 R G 44 n 44 G 44 R A 45 n 45 A 45 R C 46 n 46 C 46 R A 47 n 47 A 47 R A 48 n 48 A 48 R G 49 n 49 G 49 R A 50 n 50 A 50 R A 51 n 51 A 51 R A 52 n 52 A 52 R C 53 n 53 C 53 R A 54 n 54 A 54 R C 55 n 55 C 55 R U 56 n 56 U 56 R U 57 n 57 U 57 R G 58 n 58 G 58 R U 59 n 59 U 59 R C 60 n 60 C 60 R U 61 n 61 U 61 R G 62 n 62 G 62 R A 63 n 63 A 63 R U 64 n 64 U 64 R A 65 n 65 A 65 R U 66 n 66 U 66 R A 67 n 67 A 67 R G 68 n 68 G 68 R U 69 n 69 U 69 R G 70 n 70 G 70 R C 71 n 71 C 71 R C 72 n 72 C 72 R 6.60373440639 1.55684198791 0.157760545842 8.12580279537 5.12755973441 3.27754347845 0.834059598865 1.35124466807 1.04246445609 2.18200791813 -2.50205018651 -1.74837621802 0.113649984874 2.82871901696 1.34997147725 2.76561901625 0.0163284127614 0.139470623976 1.57538161115 0.234009989962 1.35720559907 refined 27.3581056945 10.6306448884 -13.8193106813 X-RAY DIFFRACTION 3.46782828276 2.04758573715 3.3804953437 7.45047343 0.349303303533 9.45036638857 -0.469438417951 0.632816476967 1.14709494807 0.278926404866 0.0664931014419 5.34372078009 -0.528075639398 -3.31280561798 0.51939945222 3.79880783518 0.311232846795 -0.932098173203 2.98316186493 -0.341918209235 5.12437892926 refined -2.75349188054 20.0788490594 -24.5181241051 X-RAY DIFFRACTION 3.27055066202 0.669090947023 3.75252303175 4.50402778078 1.24399951693 4.90260419186 -0.698120624619 1.19608201131 0.194902340243 -1.65337563669 0.411747681203 2.03521198865 0.28662782192 0.5137153801 0.21350506642 3.13678993578 -0.1938819256 -0.248367713336 2.04040556805 -0.248232249928 2.42122025506 refined 15.0853103012 19.4783587378 -23.7576307037 X-RAY DIFFRACTION 0.491027985631 0.236908097789 -1.9070229865 0.136318174119 -0.557037717417 4.40115217781 0.0263971361835 -0.0750806718416 -0.399488749295 0.508650120014 -0.526043146807 0.0362825102757 0.965470872272 -0.174204631016 0.426787584748 1.03774305493 -0.145057896502 -0.0973190063529 0.729082465196 0.0696496855568 1.17440235092 refined 24.4200994029 36.4032610815 -1.25992887652 X-RAY DIFFRACTION 0.522556223171 -0.634074920575 1.2432608049 3.77504209988 -0.632140957069 1.07596656398 1.20317818055 0.278864537339 -0.952568074855 1.08347748708 -0.72983677736 -0.185989756069 2.39980114074 0.0564551678284 0.101842195469 2.50599084836 0.0889874502048 0.0467974425189 1.13647348455 0.141095854769 1.85508185688 refined 28.5120596781 10.8329862394 -9.1120291661 X-RAY DIFFRACTION 3.67930202393 -1.75263934322 -0.669432068739 2.4903240874 -0.52399524985 2.93172940543 0.343381673833 0.253997010668 0.203757631989 0.179939958147 0.930730441923 1.0129286196 0.153499905362 -2.31792924567 -0.963567064736 0.814737422763 -0.249881780918 -0.0393374556145 1.25630443076 0.0190210695539 1.0010261991 refined 7.83653205616 51.4448177931 27.9333879502 X-RAY DIFFRACTION 4.07887532628 -0.765318775432 -0.0145137732454 2.10973232633 0.820187350179 6.34010185343 0.461945620412 -0.13289163114 -0.0708542240939 0.0656138349248 0.0806583443511 0.434413635132 0.215685198614 -1.3663432195 -0.181718411735 0.678412639359 -0.226295812943 0.0131878469115 0.966766072411 0.0685764822696 0.946233109553 refined 11.5470859291 49.3932102741 18.8741279642 X-RAY DIFFRACTION 5.62971259072 -0.0836735275105 -1.52336509673 3.28848806404 1.40431801275 5.10964465839 0.434108098532 -1.37727673156 -0.232932336133 0.419039381993 0.0887579839784 -0.548769604575 0.964621200012 0.773991610672 -0.295280049458 0.826097370766 -0.225884773825 -0.0177351340852 0.841004859357 0.104071191483 1.1103110139 refined 20.41638251 46.4520856119 28.5290956191 X-RAY DIFFRACTION 3.46775631496 0.274866225471 -0.201729378659 0.689709420405 0.31073587624 9.74526619196 0.651606637426 0.466950551984 -1.60815468315 0.0360693307074 0.565829961073 0.163786481455 1.51774967496 0.898421491106 -0.0969945836357 0.918106095307 -0.262380458472 -0.0409574000317 0.807330127173 0.136099138111 1.15236963027 refined 16.6296903215 38.4756426884 17.9795879553 X-RAY DIFFRACTION 4.82242350932 0.156371227315 -0.123833861239 3.39441193096 -0.623971541522 6.82788445267 0.286936429482 0.119680789791 -0.394155902609 0.256351819423 -0.387417229417 -0.126108548265 0.732221063984 -0.9592635432 -0.0815621949327 0.814032078452 -0.317186722922 -0.00973754491763 1.1104475479 0.137535684363 0.968164120534 refined 7.73941118182 42.6863588591 21.5329536641 X-RAY DIFFRACTION 5.475917632 -0.221179022104 -0.982821542242 1.8882697479 1.70904684503 7.23754953155 0.236021551078 -1.04170385679 -0.341762707171 0.861906395091 -0.328340876307 -0.182204710767 0.506406326891 -0.688475140331 -0.159223283779 0.812830795365 -0.303299021501 0.0402368231471 1.14237292634 0.141947029341 0.987469812374 refined 14.5136739953 45.8272352946 29.9269138439 X-RAY DIFFRACTION 2.95755532578 -1.03657280516 -0.415779823361 1.42323392562 0.970205349087 2.92717915664 0.324127793551 -0.445147012667 0.401799402909 0.0012048622063 0.0635595729302 -0.0910396918657 -0.210484477797 -0.771579008568 -0.13047439191 0.783064853205 -0.269126870868 -0.036154520817 1.0404878814 0.00453297610312 0.983771659989 refined 14.8735200218 54.1951272109 29.8557088825 X-RAY DIFFRACTION 3.70540306466 2.19683145793 -2.73964970841 4.28954343153 -2.03498214451 7.65247579366 0.28710656892 -0.860941976482 1.10676049947 0.317807693573 -0.0433908993483 -0.323640023086 -0.873841661026 -0.759072023116 -0.400279945495 0.857720105686 -0.192876322626 0.0911648896517 1.42229839323 -0.448421428121 1.29336782134 refined 14.8616678267 71.0332935117 50.5663939633 X-RAY DIFFRACTION 3.13729068002 1.01819617275 -1.61096848612 5.26606678959 -0.957851641358 3.96405078606 -0.0727358614644 -1.23459889713 0.29717734513 0.612782660777 0.244637500303 -0.816910824684 -0.583944906984 -0.484727904002 -0.134627275675 1.05119172262 -0.224422573864 0.00309669980345 1.51239861708 -0.442076574096 1.15143294333 refined 15.7349808022 68.4881757317 51.8223390751 X-RAY DIFFRACTION 1.66853744994 -0.904869028703 -0.146288798358 3.08756520156 -1.38015176656 6.54632805472 -0.0593507415488 -0.506221641432 0.7937145279 -0.375766784231 0.195496714496 0.352745876666 -1.63840925159 -1.43090097283 -0.148283071231 1.08309239373 -0.128337872013 0.214141804334 1.98783688474 -0.585971582436 1.35020912217 refined 5.99060431354 70.0825933141 52.1008756751 X-RAY DIFFRACTION 7.68857978684 -1.11325742914 0.453557267971 3.37007182032 2.40110371125 6.1124691424 0.199386781734 -0.801011758443 0.181616929942 -0.00908324161341 -0.0990998612367 -0.177695161636 -0.102935818446 0.144180280553 -0.130154061607 0.656707991061 -0.211356471646 0.0355301021468 0.556571894574 0.082510360003 0.854143585023 refined 34.2279691131 55.1209105065 22.5118076348 X-RAY DIFFRACTION 4.17453677749 -1.10781848999 -2.41337095179 1.65963596421 1.08577858202 5.89938141623 0.354267458302 -1.29354620511 0.517556520654 0.367055669837 -0.0777487211743 -0.206444045603 -0.271538593036 -0.204458237251 -0.314044672421 0.668204829284 -0.149743758437 -0.0684688519934 0.968650758461 -0.0920891949425 0.917402450701 refined 27.3408510481 61.0733188576 38.6356698976 X-RAY DIFFRACTION 3.04146885113 0.294885243755 -2.77060484277 3.43289078278 -0.117382019608 5.65731933677 0.167146236768 -1.23457001399 0.0898316359948 0.726196366952 -0.0589430836454 -0.5313558633 0.124188931913 0.576258125676 -0.160033630727 1.05331384493 -0.151478447207 -0.0975717820155 1.7782580369 -0.333811842201 1.1406391609 refined 26.698455456 64.5905546754 58.8760289584 X-RAY DIFFRACTION R 1 C R 10 C X-RAY DIFFRACTION 1 chain 'R' and (resid 1 through 10 ) R 11 C R 25 C X-RAY DIFFRACTION 2 chain 'R' and (resid 11 through 25 ) R 26 C R 40 C X-RAY DIFFRACTION 3 chain 'R' and (resid 26 through 40 ) R 41 C R 60 C X-RAY DIFFRACTION 4 chain 'R' and (resid 41 through 60 ) R 61 C R 72 C X-RAY DIFFRACTION 5 chain 'R' and (resid 61 through 72 ) H 3 A 1 H 20 A 18 X-RAY DIFFRACTION 6 chain 'H' and (resid 3 through 20 ) H 21 A 19 H 42 A 40 X-RAY DIFFRACTION 7 chain 'H' and (resid 21 through 42 ) H 43 A 41 H 54 A 52 X-RAY DIFFRACTION 8 chain 'H' and (resid 43 through 54 ) H 55 A 53 H 67 A 65 X-RAY DIFFRACTION 9 chain 'H' and (resid 55 through 67 ) H 68 A 66 H 86 A 84 X-RAY DIFFRACTION 10 chain 'H' and (resid 68 through 86 ) H 87 A 85 H 102 A 100 X-RAY DIFFRACTION 11 chain 'H' and (resid 87 through 102 ) H 103 A 101 H 136 A 134 X-RAY DIFFRACTION 12 chain 'H' and (resid 103 through 136 ) H 137 A 135 H 177 A 175 X-RAY DIFFRACTION 13 chain 'H' and (resid 137 through 177 ) H 178 A 176 H 205 A 203 X-RAY DIFFRACTION 14 chain 'H' and (resid 178 through 205 ) H 206 A 204 H 228 A 226 X-RAY DIFFRACTION 15 chain 'H' and (resid 206 through 228 ) L 1 B 1 L 76 B 76 X-RAY DIFFRACTION 16 chain 'L' and (resid 1 through 76 ) L 77 B 77 L 129 B 129 X-RAY DIFFRACTION 17 chain 'L' and (resid 77 through 129 ) L 130 B 130 L 215 B 215 X-RAY DIFFRACTION 18 chain 'L' and (resid 130 through 215 ) author_defined_assembly 3 trimeric native gel electrophoresis 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 H N GLN 6 A N GLN 6 H O SER 28 A O SER 28 H N CYS 25 A N CYS 25 H O ALA 82 A O ALA 82 H O TYR 83 A O TYR 83 H N SER 74 A N SER 74 H N GLY 13 A N GLY 13 H O THR 122 A O THR 122 H O THR 119 A O THR 119 H N TYR 97 A N TYR 97 H O TYR 98 A O TYR 98 H N VAL 40 A N VAL 40 H N ARG 41 A N ARG 41 H O GLU 49 A O GLU 49 H N SER 53 A N SER 53 H O TYR 62 A O TYR 62 H N GLY 13 A N GLY 13 H O THR 122 A O THR 122 H O THR 119 A O THR 119 H N TYR 97 A N TYR 97 H N ARG 101 A N ARG 101 H O TYR 114 A O TYR 114 H N LEU 136 A N LEU 136 H O GLY 151 A O GLY 151 H N CYS 152 A N CYS 152 H O SER 192 A O SER 192 H O VAL 193 A O VAL 193 H N HIS 176 A N HIS 176 H N LEU 136 A N LEU 136 H O GLY 151 A O GLY 151 H N CYS 152 A N CYS 152 H O SER 192 A O SER 192 H O SER 189 A O SER 189 H N VAL 181 A N VAL 181 H N SER 165 A N SER 165 H O ASN 209 A O ASN 209 H N HIS 212 A N HIS 212 H O THR 217 A O THR 217 L N THR 6 B N THR 6 L O ARG 25 B O ARG 25 L N VAL 20 B N VAL 20 L O ILE 76 B O ILE 76 L O ASP 71 B O ASP 71 L N SER 68 B N SER 68 L N LEU 12 B N LEU 12 L O GLU 106 B O GLU 106 L O THR 103 B O THR 103 L N TYR 87 B N TYR 87 L O TYR 88 B O TYR 88 L N TYR 37 B N TYR 37 L N GLN 38 B N GLN 38 L O LYS 46 B O LYS 46 L N TYR 50 B N TYR 50 L O SER 54 B O SER 54 L N LEU 12 B N LEU 12 L O GLU 106 B O GLU 106 L O THR 103 B O THR 103 L N TYR 87 B N TYR 87 L N GLN 91 B N GLN 91 L O THR 98 B O THR 98 L N PHE 117 B N PHE 117 L O LEU 136 B O LEU 136 L N VAL 133 B N VAL 133 L O LEU 180 B O LEU 180 L O THR 179 B O THR 179 L N GLN 161 B N GLN 161 L O ALA 154 B O ALA 154 L N VAL 151 B N VAL 151 L N GLN 148 B N GLN 148 L O GLU 196 B O GLU 196 L N VAL 197 B N VAL 197 L O VAL 206 B O VAL 206 1 H GLU 1 A GLU 1 1 Y 1 H ILE 2 A ILE 2 1 Y 1 H ASP 229 A ASP 229 1 Y 1 H LYS 230 A LYS 230 1 Y 1 H THR 231 A THR 231 1 Y 1 H HIS 232 A HIS 232 1 Y 1 H THR 233 A THR 233 1 Y 1 2.83 0.40 105.80 108.63 R R R C8 N9 C4 A A A 51 51 51 N 1 -3.08 0.50 110.60 107.52 R R R C2 N3 C4 A A A 52 52 52 N 1 H TYR 57 73.94 -21.34 1 H SER 108 -141.20 26.45 1 H SER 139 -77.25 -164.84 1 H SER 140 -51.70 -9.90 1 H THR 143 51.97 70.42 1 H ASP 156 60.28 69.39 1 H ASN 167 39.21 58.65 1 H SER 227 54.50 -169.54 1 L SER 15 -100.54 -167.77 1 L SER 31 49.34 -133.21 1 L ALA 52 69.65 -22.96 1 L SER 64 -172.25 136.68 1 L ASN 139 60.35 61.56 1 L ASN 159 -95.69 34.90 1 L TYR 174 -115.46 -169.06 1 L ASN 211 -100.32 -75.32 1 L ARG 212 -129.23 -71.51 1 L GLU 214 35.60 47.14 144.41 0.2337 0.1897 0.1941 3.00 38.77 3502 31615 35117 9.97 99.36 0.5048 1 FREE R-VALUE 1.36 MOLECULAR REPLACEMENT 28.6270 0.9000 1.1000 GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 3.00 38.77 0 4867 0 1540 3327 0.0081 5126 1.1520 7308 0.0560 879 0.0101 663 18.3216 1339 0.5615 0.4476 3.04 133 1181 94.67 0.4060 0.3918 3.08 143 1287 98.83 0.4463 0.3708 3.13 140 1234 99.13 0.3309 0.3357 3.17 142 1273 98.61 0.3005 0.2881 3.23 144 1248 99.15 0.3195 0.2685 3.28 140 1242 99.42 0.3007 0.2357 3.34 143 1313 99.39 0.2855 0.2533 3.41 143 1253 99.29 0.2367 0.2310 3.48 135 1241 99.14 0.3044 0.2401 3.55 143 1269 99.37 0.2679 0.2364 3.63 137 1252 99.71 0.2415 0.2096 3.72 132 1261 99.71 0.2279 0.2020 3.82 145 1277 99.79 0.2561 0.1940 3.94 144 1276 99.65 0.2275 0.1792 4.06 145 1263 99.58 0.2348 0.1775 4.21 139 1262 99.72 0.1992 0.1541 4.38 137 1267 99.93 0.2015 0.1587 4.58 144 1285 99.93 0.2196 0.1445 4.82 145 1280 99.86 0.2058 0.1540 5.12 137 1277 99.93 0.1968 0.1595 5.51 134 1271 100.00 0.2378 0.1870 6.06 136 1275 99.93 0.2177 0.1914 6.94 145 1277 99.93 0.2158 0.1825 8.72 140 1265 100.00 0.1833 0.1382 38.77 136 1286 99.72 84.160 3.00 46.83 9E7G 35117 0.998 0.115 1 14.6 13.6 99.8 1.671 3.00 3.05 1.0 889 0.795 1 96.7 refinement PHENIX 1.20.1_4487 data reduction XDS data scaling Aimless phasing PHENIX 23 orthorhombic I 2 2 2 I 2 2 x,y,z x,-y,-z -x,y,-z -x,-y,z x+1/2,y+1/2,z+1/2 x+1/2,-y+1/2,-z+1/2 -x+1/2,y+1/2,-z+1/2 -x+1/2,-y+1/2,z+1/2 N Crystal structure of HIV-1 RRE SLII G34C mutant in complex with Fab BL3-6 1 N N 2 N N 3 N N H TYR 31 A TYR 31 HELX_P H SER 35 A SER 35 5 AA1 5 H ASP 65 A ASP 65 HELX_P H LYS 68 A LYS 68 5 AA2 4 H ARG 90 A ARG 90 HELX_P H THR 94 A THR 94 5 AA3 5 H TYR 104 A TYR 104 HELX_P H GLY 109 A GLY 109 1 AA4 6 H LYS 213 A LYS 213 HELX_P H ASN 216 A ASN 216 5 AA5 4 L GLN 80 B GLN 80 HELX_P L PHE 84 B PHE 84 5 AA6 5 L SER 122 B SER 122 HELX_P L LYS 127 B LYS 127 1 AA7 6 L LYS 184 B LYS 184 HELX_P L LYS 189 B LYS 189 1 AA8 6 disulf 2.062 H CYS 25 A SG CYS 25 1_555 H CYS 99 A SG CYS 99 1_555 disulf 2.034 H CYS 152 A SG CYS 152 1_555 H CYS 208 A SG CYS 208 1_555 disulf 2.080 L CYS 24 B SG CYS 24 1_555 L CYS 89 B SG CYS 89 1_555 disulf 2.039 L CYS 135 B SG CYS 135 1_555 L CYS 195 B SG CYS 195 1_555 hydrog WATSON-CRICK R G 1 C N1 G 1 1_555 R C 72 C N3 C 72 1_555 hydrog WATSON-CRICK R G 1 C N2 G 1 1_555 R C 72 C O2 C 72 1_555 hydrog WATSON-CRICK R G 1 C O6 G 1 1_555 R C 72 C N4 C 72 1_555 hydrog WATSON-CRICK R G 2 C N1 G 2 1_555 R C 71 C N3 C 71 1_555 hydrog WATSON-CRICK R G 2 C N2 G 2 1_555 R C 71 C O2 C 71 1_555 hydrog WATSON-CRICK R G 2 C O6 G 2 1_555 R C 71 C N4 C 71 1_555 hydrog WATSON-CRICK R C 3 C N3 C 3 1_555 R G 70 C N1 G 70 1_555 hydrog WATSON-CRICK R C 3 C N4 C 3 1_555 R G 70 C O6 G 70 1_555 hydrog WATSON-CRICK R C 3 C O2 C 3 1_555 R G 70 C N2 G 70 1_555 hydrog WATSON-CRICK R A 4 C N1 A 4 1_555 R U 69 C N3 U 69 1_555 hydrog WATSON-CRICK R A 4 C N6 A 4 1_555 R U 69 C O4 U 69 1_555 hydrog WATSON-CRICK R C 5 C N3 C 5 1_555 R G 68 C N1 G 68 1_555 hydrog WATSON-CRICK R C 5 C N4 C 5 1_555 R G 68 C O6 G 68 1_555 hydrog WATSON-CRICK R C 5 C O2 C 5 1_555 R G 68 C N2 G 68 1_555 hydrog WATSON-CRICK R U 6 C N3 U 6 1_555 R A 67 C N1 A 67 1_555 hydrog WATSON-CRICK R U 6 C O4 U 6 1_555 R A 67 C N6 A 67 1_555 hydrog WATSON-CRICK R A 7 C N1 A 7 1_555 R U 66 C N3 U 66 1_555 hydrog WATSON-CRICK R A 7 C N6 A 7 1_555 R U 66 C O4 U 66 1_555 hydrog WATSON-CRICK R U 8 C N3 U 8 1_555 R A 65 C N1 A 65 1_555 hydrog WATSON-CRICK R U 8 C O4 U 8 1_555 R A 65 C N6 A 65 1_555 hydrog WATSON-CRICK R G 9 C N1 G 9 1_555 R C 37 C N3 C 37 1_555 hydrog WATSON-CRICK R G 9 C N2 G 9 1_555 R C 37 C O2 C 37 1_555 hydrog WATSON-CRICK R G 9 C O6 G 9 1_555 R C 37 C N4 C 37 1_555 hydrog TYPE_8_PAIR R G 10 C N1 G 10 1_555 R A 36 C N1 A 36 1_555 hydrog TYPE_8_PAIR R G 10 C O6 G 10 1_555 R A 36 C N6 A 36 1_555 hydrog WATSON-CRICK R G 11 C N1 G 11 1_555 R C 34 C N3 C 34 1_555 hydrog WATSON-CRICK R G 11 C N2 G 11 1_555 R C 34 C O2 C 34 1_555 hydrog WATSON-CRICK R G 11 C O6 G 11 1_555 R C 34 C N4 C 34 1_555 hydrog WATSON-CRICK R C 12 C N3 C 12 1_555 R G 33 C N1 G 33 1_555 hydrog WATSON-CRICK R C 12 C N4 C 12 1_555 R G 33 C O6 G 33 1_555 hydrog WATSON-CRICK R C 12 C O2 C 12 1_555 R G 33 C N2 G 33 1_555 hydrog WATSON-CRICK R G 13 C N1 G 13 1_555 R C 32 C N3 C 32 1_555 hydrog WATSON-CRICK R G 13 C N2 G 13 1_555 R C 32 C O2 C 32 1_555 hydrog WATSON-CRICK R G 13 C O6 G 13 1_555 R C 32 C N4 C 32 1_555 hydrog WATSON-CRICK R C 14 C N3 C 14 1_555 R G 30 C N1 G 30 1_555 hydrog WATSON-CRICK R C 14 C N4 C 14 1_555 R G 30 C O6 G 30 1_555 hydrog WATSON-CRICK R C 14 C O2 C 14 1_555 R G 30 C N2 G 30 1_555 hydrog WATSON-CRICK R A 15 C N1 A 15 1_555 R U 29 C N3 U 29 1_555 hydrog WATSON-CRICK R A 15 C N6 A 15 1_555 R U 29 C O4 U 29 1_555 hydrog WATSON-CRICK R G 16 C N1 G 16 1_555 R C 28 C N3 C 28 1_555 hydrog WATSON-CRICK R G 16 C N2 G 16 1_555 R C 28 C O2 C 28 1_555 hydrog WATSON-CRICK R G 16 C O6 G 16 1_555 R C 28 C N4 C 28 1_555 hydrog WATSON-CRICK R C 17 C N3 C 17 1_555 R G 27 C N1 G 27 1_555 hydrog WATSON-CRICK R C 17 C N4 C 17 1_555 R G 27 C O6 G 27 1_555 hydrog WATSON-CRICK R C 17 C O2 C 17 1_555 R G 27 C N2 G 27 1_555 hydrog WATSON-CRICK R G 18 C N1 G 18 1_555 R C 26 C N3 C 26 1_555 hydrog WATSON-CRICK R G 18 C N2 G 18 1_555 R C 26 C O2 C 26 1_555 hydrog WATSON-CRICK R G 18 C O6 G 18 1_555 R C 26 C N4 C 26 1_555 hydrog WATSON-CRICK R U 19 C N3 U 19 1_555 R A 25 C N1 A 25 1_555 hydrog WATSON-CRICK R U 19 C O4 U 19 1_555 R A 25 C N6 A 25 1_555 hydrog WATSON-CRICK R C 20 C N3 C 20 1_555 R G 24 C N1 G 24 1_555 hydrog WATSON-CRICK R C 20 C N4 C 20 1_555 R G 24 C O6 G 24 1_555 hydrog WATSON-CRICK R C 20 C O2 C 20 1_555 R G 24 C N2 G 24 1_555 hydrog HOOGSTEEN R A 21 C N6 A 21 1_555 R U 23 C O4 U 23 1_555 hydrog HOOGSTEEN R A 21 C N7 A 21 1_555 R U 23 C N3 U 23 1_555 hydrog A-A MISPAIR R A 31 C N6 A 31 1_555 R A 67 C N3 A 67 1_555 hydrog WATSON-CRICK R C 42 C N3 C 42 1_555 R G 62 C N1 G 62 1_555 hydrog WATSON-CRICK R C 42 C N4 C 42 1_555 R G 62 C O6 G 62 1_555 hydrog WATSON-CRICK R C 42 C O2 C 42 1_555 R G 62 C N2 G 62 1_555 hydrog WATSON-CRICK R A 43 C N1 A 43 1_555 R U 61 C N3 U 61 1_555 hydrog WATSON-CRICK R A 43 C N6 A 43 1_555 R U 61 C O4 U 61 1_555 hydrog WATSON-CRICK R G 44 C N1 G 44 1_555 R C 60 C N3 C 60 1_555 hydrog WATSON-CRICK R G 44 C N2 G 44 1_555 R C 60 C O2 C 60 1_555 hydrog WATSON-CRICK R G 44 C O6 G 44 1_555 R C 60 C N4 C 60 1_555 hydrog WATSON-CRICK R A 45 C N1 A 45 1_555 R U 59 C N3 U 59 1_555 hydrog WATSON-CRICK R A 45 C N6 A 45 1_555 R U 59 C O4 U 59 1_555 hydrog WATSON-CRICK R C 46 C N3 C 46 1_555 R G 58 C N1 G 58 1_555 hydrog WATSON-CRICK R C 46 C N4 C 46 1_555 R G 58 C O6 G 58 1_555 hydrog WATSON-CRICK R C 46 C O2 C 46 1_555 R G 58 C N2 G 58 1_555 hydrog WATSON-CRICK R A 47 C N1 A 47 1_555 R U 57 C N3 U 57 1_555 hydrog WATSON-CRICK R A 47 C N6 A 47 1_555 R U 57 C O4 U 57 1_555 hydrog WATSON-CRICK R A 48 C N1 A 48 1_555 R U 56 C N3 U 56 1_555 hydrog WATSON-CRICK R A 48 C N6 A 48 1_555 R U 56 C O4 U 56 1_555 hydrog WATSON-CRICK R G 49 C N1 G 49 1_555 R C 55 C N3 C 55 1_555 hydrog WATSON-CRICK R G 49 C N2 G 49 1_555 R C 55 C O2 C 55 1_555 hydrog WATSON-CRICK R G 49 C O6 G 49 1_555 R C 55 C N4 C 55 1_555 hydrog A-A MISPAIR R A 51 C N3 A 51 1_555 R A 54 C N6 A 54 1_555 RNA HIV-1, Replication, Fab, Chaperone, Rev response element, RNA H PHE 158 A PHE 158 1 H PRO 159 A PRO 159 -12.98 H GLU 160 A GLU 160 1 H PRO 161 A PRO 161 5.05 L SER 8 B SER 8 1 L PRO 9 B PRO 9 3.21 L PHE 95 B PHE 95 1 L PRO 96 B PRO 96 -3.56 L TYR 141 B TYR 141 1 L PRO 142 B PRO 142 3.21 9E7G PDB 1 1 9E7G 9E7G PDB 2 1 9E7G U26942.1 GB 3 7174 902798 AGCACUAUGGGCGCAGCGUCAAUGACGCUGACGGUACAGGCCAGACAAUUAUUGUCUGAUAUAGUGCA 1 233 9E7G 1 233 9E7G H 1 1 233 1 215 9E7G 1 215 9E7G L 2 1 215 7174 7241 9E7G 1 72 902798 R 3 1 72 3 A conflict G 1 9E7G R 902798 GB 7174 1 3 G engineered mutation C 34 9E7G R 902798 GB 7207 34 3 U conflict G 49 9E7G R 902798 GB 7222 49 3 U conflict A 50 9E7G R 902798 GB 7223 50 3 insertion A 52 9E7G R 902798 GB 52 3 insertion C 53 9E7G R 902798 GB 53 3 insertion A 54 9E7G R 902798 GB 54 3 insertion C 55 9E7G R 902798 GB 55 3 A conflict C 72 9E7G R 902798 GB 7241 72 4 6 4 4 4 3 4 6 4 4 4 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel H GLN 6 A GLN 6 H SER 10 A SER 10 H LEU 21 A LEU 21 H SER 28 A SER 28 H THR 81 A THR 81 H MET 86 A MET 86 H PHE 71 A PHE 71 H ASP 76 A ASP 76 H GLY 13 A GLY 13 H VAL 15 A VAL 15 H THR 119 A THR 119 H VAL 123 A VAL 123 H ALA 95 A ALA 95 H GLN 102 A GLN 102 H SER 36 A SER 36 H GLN 42 A GLN 42 H LEU 48 A LEU 48 H ILE 54 A ILE 54 H THR 61 A THR 61 H TYR 63 A TYR 63 H GLY 13 A GLY 13 H VAL 15 A VAL 15 H THR 119 A THR 119 H VAL 123 A VAL 123 H ALA 95 A ALA 95 H GLN 102 A GLN 102 H PHE 112 A PHE 112 H TRP 115 A TRP 115 H SER 132 A SER 132 H LEU 136 A LEU 136 H THR 147 A THR 147 H TYR 157 A TYR 157 H TYR 188 A TYR 188 H PRO 197 A PRO 197 H VAL 175 A VAL 175 H THR 177 A THR 177 H SER 132 A SER 132 H LEU 136 A LEU 136 H THR 147 A THR 147 H TYR 157 A TYR 157 H TYR 188 A TYR 188 H PRO 197 A PRO 197 H VAL 181 A VAL 181 H LEU 182 A LEU 182 H THR 163 A THR 163 H TRP 166 A TRP 166 H TYR 206 A TYR 206 H HIS 212 A HIS 212 H THR 217 A THR 217 H VAL 223 A VAL 223 L MET 5 B MET 5 L SER 8 B SER 8 L VAL 20 B VAL 20 L ALA 26 B ALA 26 L ASP 71 B ASP 71 L ILE 76 B ILE 76 L GLY 65 B GLY 65 L SER 68 B SER 68 L SER 11 B SER 11 L ALA 14 B ALA 14 L THR 103 B THR 103 L ILE 107 B ILE 107 L THR 86 B THR 86 L GLN 91 B GLN 91 L VAL 34 B VAL 34 L GLN 39 B GLN 39 L PRO 45 B PRO 45 L TYR 50 B TYR 50 L SER 54 B SER 54 L LEU 55 B LEU 55 L SER 11 B SER 11 L ALA 14 B ALA 14 L THR 103 B THR 103 L ILE 107 B ILE 107 L THR 86 B THR 86 L GLN 91 B GLN 91 L THR 98 B THR 98 L PHE 99 B PHE 99 L SER 115 B SER 115 L PHE 119 B PHE 119 L THR 130 B THR 130 L ASN 138 B ASN 138 L SER 175 B SER 175 L SER 183 B SER 183 L SER 160 B SER 160 L VAL 164 B VAL 164 L ALA 154 B ALA 154 L LEU 155 B LEU 155 L ALA 145 B ALA 145 L VAL 151 B VAL 151 L TYR 193 B TYR 193 L HIS 199 B HIS 199 L VAL 206 B VAL 206 L PHE 210 B PHE 210 23 I 2 2 2 I 2 2