0.012849 0.000000 0.000000 0.000000 0.012849 0.000000 0.000000 0.000000 0.026882 0.00000 0.00000 0.00000 6 6 2.3103 1.0201 1.5888 0.8651 20.8439 10.2075 0.5687 51.6512 0.2156 9 9 3.5395 2.6414 1.5171 1.0244 10.2825 4.2944 0.2615 26.1476 0.3057 1 1 0.4930 0.3229 0.1402 0.0408 10.5109 26.1257 3.1424 57.7997 0.0030 7 7 12.2220 3.1346 2.0141 1.1672 0.0057 9.8933 28.9975 0.5826 -11.5379 11 11 4.7659 3.1758 1.2683 1.1136 3.2850 8.8422 0.3136 129.4240 0.7359 8 8 3.0487 2.2870 1.5464 0.8671 13.2771 5.7011 0.3239 32.9089 0.2508 44 44 19.2695 12.9196 4.8639 1.5677 0.8085 8.4347 24.7997 94.2928 4.6904 16 16 6.9054 5.2035 1.4379 1.5863 1.4679 22.2151 0.2536 56.1720 1.0555 Teran, A. Ferraro, G. Merlino, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 77.830 77.830 37.200 C18 H15 F2 N2 O7 Ru2 611.458 [Ru2-N,N'-diphenylformamidinate(O2CCH3)2(O2CO)] complex Diruthenium complex non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer N O3 -1 62.005 NITRATE ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N C Y 2 N C Y 3 N C Y 4 N C N 5 N C N 6 N C N 7 N C N 8 N C Y 9 N C Y 10 N C N 11 N N N 12 N N N 13 N O N 14 N O N 15 N RU N 16 N RU N 17 N O N 18 N O N 19 N O N 20 N O Y 21 N C Y 22 N C N 23 N O Y 24 N C Y 25 N C N 26 N F Y 27 N C Y 28 N C N 29 N F N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N C N 43 N C N 44 N H N 45 N H N 46 N H N 47 N N N 48 S C N 49 N C N 50 N O N 51 N C N 52 N O N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N N N 61 S C N 62 N C N 63 N O N 64 N C N 65 N C N 66 N C N 67 N N N 68 N C N 69 N N N 70 N N N 71 N O N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N N N 88 S C N 89 N C N 90 N O N 91 N C N 92 N C N 93 N O N 94 N N N 95 N O N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N N N 105 S C N 106 N C N 107 N O N 108 N C N 109 N C N 110 N O N 111 N O N 112 N O N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N N N 121 R C N 122 N C N 123 N O N 124 N C N 125 N S N 126 N O N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N N N 135 S C N 136 N C N 137 N O N 138 N C N 139 N C N 140 N C N 141 N O N 142 N N N 143 N O N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N N N 155 S C N 156 N C N 157 N O N 158 N C N 159 N C N 160 N C N 161 N O N 162 N O N 163 N O N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N N N 174 N C N 175 N C N 176 N O N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C Y 188 N C Y 189 N N Y 190 N C Y 191 N C Y 192 N N N 193 N O N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N O N 205 N H N 206 N H N 207 N N N 208 S C N 209 N C N 210 N O N 211 S C N 212 N C N 213 N C N 214 N C N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N N N 230 S C N 231 N C N 232 N O N 233 N C N 234 N C N 235 N C N 236 N C N 237 N O N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N C N 259 N N N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N C N 282 N S N 283 N C N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N NA N 297 N N N 298 N O N 299 N O N 300 N O N 301 N N N 302 S C N 303 N C N 304 N O N 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N C Y 310 N C Y 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C N 329 N C N 330 N C N 331 N O N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N N N 342 S C N 343 N C N 344 N O N 345 N C N 346 N O N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N N N 356 S C N 357 N C N 358 N O N 359 R C N 360 N O N 361 N C N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N N Y 381 N C Y 382 N C Y 383 N C Y 384 N C Y 385 N C N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N C Y 408 N C Y 409 N C N 410 N O N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N N N 424 S C N 425 N C N 426 N O N 427 N C N 428 N C N 429 N C N 430 N O N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 1 N doub Y 2 N doub Y 3 N sing N 4 N sing N 5 N sing Y 6 N sing N 7 N sing Y 8 N doub Y 9 N sing N 10 N sing Y 11 N sing Y 12 N doub N 13 N sing N 14 N sing Y 15 N doub N 16 N sing Y 17 N doub N 18 N doub N 19 N sing N 20 N sing N 21 N sing Y 22 N doub N 23 N sing N 24 N sing N 25 N sing N 26 N sing Y 27 N sing Y 28 N sing N 29 N sing N 30 N sing N 31 N doub N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N doub N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N doub N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing Y 191 N sing Y 192 N doub Y 193 N doub N 194 N sing Y 195 N sing N 196 N sing Y 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N doub N 307 N sing Y 308 N doub N 309 N sing Y 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing Y 371 N doub Y 372 N sing Y 373 N sing N 374 N sing Y 375 N doub Y 376 N sing Y 377 N sing N 378 N sing Y 379 N sing Y 380 N doub N 381 N sing Y 382 N doub N 383 N sing Y 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N doub N 395 N sing N 396 N sing N 397 N sing N 398 N sing Y 399 N doub Y 400 N sing Y 401 N sing N 402 N sing Y 403 N doub N 404 N sing Y 405 N doub N 406 N sing Y 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N doub N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing US Inorg.Chem. INOCAJ 0009 0020-1669 10.1021/acs.inorgchem.6c02947 Protein Recognition and Amyloid Remodeling Governed 2026 10.2210/pdb29mr/pdb pdb_000029mr 100 1 N PIXEL 2022-06-17 DECTRIS PILATUS 6M SINGLE WAVELENGTH M x-ray 1 1 1.0 11.2C ELETTRA 1 SYNCHROTRON ELETTRA BEAMLINE 11.2C 14331.160 Lysozyme C 3.2.1.17 1 nat polymer 22.990 SODIUM ION 1 syn non-polymer 62.005 NITRATE ION 3 syn non-polymer 611.458 [Ru2-N,N'-diphenylformamidinate(O2CCH3)2(O2CO)] complex 2 syn non-polymer 18.015 water 126 nat water 1,4-beta-N-acetylmuramidase C,Allergen Gal d IV no no KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n chicken sample 1 129 9031 Gallus gallus 1 1.97 37.42 VAPOR DIFFUSION, HANGING DROP 4 20% ethylene glycol, 0.1 M sodium acetate at pH 4.0, and 0.6 M sodium nitrate 293 repository Initial release 1 0 2026-09-02 Not funded ateran@cnio.es 0000-0001-6126-6230 Aaron Teran principal investigator/group leader Giarita.ferraro@unina.it 0000-0001-9385-2429 Giarita Ferraro principal investigator/group leader Antonello.merlino@unina.it 0000-0002-1045-7720 Antonello Merlino principal investigator/group leader N PDBE N PDBE 2026-03-23 REL REL A1IQW A1IQW SUBJECT OF INVESTIGATION NA SODIUM ION NO3 NITRATE ION A1IQW [Ru2-N,N'-diphenylformamidinate(O2CCH3)2(O2CO)] complex HOH water Y Y 193L PDB experimental model A CYS 6 Disulfide bridge SG A CYS 6 A CYS 127 SG A CYS 127 1_555 1_555 None A CYS 30 Disulfide bridge SG A CYS 30 A CYS 115 SG A CYS 115 1_555 1_555 None A CYS 64 Disulfide bridge SG A CYS 64 A CYS 80 SG A CYS 80 1_555 1_555 None A CYS 76 Disulfide bridge SG A CYS 76 A CYS 94 SG A CYS 94 1_555 1_555 None NA 131 2 NA NA 201 A NO3 132 3 NO3 NO3 202 A NO3 133 3 NO3 NO3 203 A NO3 134 3 NO3 NO3 204 A TM5 1 4 A1IQW A1IQW 205 A TM5 1 4 A1IQW A1IQW 206 A HOH 15 5 HOH HOH 301 A HOH 17 5 HOH HOH 302 A HOH 109 5 HOH HOH 303 A HOH 121 5 HOH HOH 304 A HOH 50 5 HOH HOH 305 A HOH 117 5 HOH HOH 306 A HOH 100 5 HOH HOH 307 A HOH 64 5 HOH HOH 308 A HOH 41 5 HOH HOH 309 A HOH 99 5 HOH HOH 310 A HOH 56 5 HOH HOH 311 A HOH 39 5 HOH HOH 312 A HOH 72 5 HOH HOH 313 A HOH 73 5 HOH HOH 314 A HOH 86 5 HOH HOH 315 A HOH 112 5 HOH HOH 316 A HOH 130 5 HOH HOH 317 A HOH 126 5 HOH HOH 318 A HOH 90 5 HOH HOH 319 A HOH 83 5 HOH HOH 320 A HOH 62 5 HOH HOH 321 A HOH 118 5 HOH HOH 322 A HOH 43 5 HOH HOH 323 A HOH 51 5 HOH HOH 324 A HOH 31 5 HOH HOH 325 A HOH 28 5 HOH HOH 326 A HOH 101 5 HOH HOH 327 A HOH 9 5 HOH HOH 328 A HOH 116 5 HOH HOH 329 A HOH 60 5 HOH HOH 330 A HOH 1 5 HOH HOH 331 A HOH 94 5 HOH HOH 332 A HOH 53 5 HOH HOH 333 A HOH 74 5 HOH HOH 334 A HOH 40 5 HOH HOH 335 A HOH 24 5 HOH HOH 336 A HOH 77 5 HOH HOH 337 A HOH 8 5 HOH HOH 338 A HOH 3 5 HOH HOH 339 A HOH 48 5 HOH HOH 340 A HOH 134 5 HOH HOH 341 A HOH 108 5 HOH HOH 342 A HOH 122 5 HOH HOH 343 A HOH 52 5 HOH HOH 344 A HOH 16 5 HOH HOH 345 A HOH 25 5 HOH HOH 346 A HOH 7 5 HOH HOH 347 A HOH 81 5 HOH HOH 348 A HOH 85 5 HOH HOH 349 A HOH 10 5 HOH HOH 350 A HOH 18 5 HOH HOH 351 A HOH 70 5 HOH HOH 352 A HOH 33 5 HOH HOH 353 A HOH 91 5 HOH HOH 354 A HOH 93 5 HOH HOH 355 A HOH 57 5 HOH HOH 356 A HOH 34 5 HOH HOH 357 A HOH 104 5 HOH HOH 358 A HOH 2 5 HOH HOH 359 A HOH 13 5 HOH HOH 360 A HOH 22 5 HOH HOH 361 A HOH 29 5 HOH HOH 362 A HOH 71 5 HOH HOH 363 A HOH 14 5 HOH HOH 364 A HOH 30 5 HOH HOH 365 A HOH 42 5 HOH HOH 366 A HOH 47 5 HOH HOH 367 A HOH 66 5 HOH HOH 368 A HOH 37 5 HOH HOH 369 A HOH 19 5 HOH HOH 370 A HOH 65 5 HOH HOH 371 A HOH 127 5 HOH HOH 372 A HOH 27 5 HOH HOH 373 A HOH 54 5 HOH HOH 374 A HOH 5 5 HOH HOH 375 A HOH 61 5 HOH HOH 376 A HOH 11 5 HOH HOH 377 A HOH 4 5 HOH HOH 378 A HOH 111 5 HOH HOH 379 A HOH 49 5 HOH HOH 380 A HOH 87 5 HOH HOH 381 A HOH 103 5 HOH HOH 382 A HOH 23 5 HOH HOH 383 A HOH 63 5 HOH HOH 384 A HOH 125 5 HOH HOH 385 A HOH 96 5 HOH HOH 386 A HOH 82 5 HOH HOH 387 A HOH 12 5 HOH HOH 388 A HOH 136 5 HOH HOH 389 A HOH 114 5 HOH HOH 390 A HOH 20 5 HOH HOH 391 A HOH 102 5 HOH HOH 392 A HOH 113 5 HOH HOH 393 A HOH 124 5 HOH HOH 394 A HOH 21 5 HOH HOH 395 A HOH 106 5 HOH HOH 396 A HOH 105 5 HOH HOH 397 A HOH 68 5 HOH HOH 398 A HOH 128 5 HOH HOH 399 A HOH 76 5 HOH HOH 400 A HOH 84 5 HOH HOH 401 A HOH 35 5 HOH HOH 402 A HOH 26 5 HOH HOH 403 A HOH 78 5 HOH HOH 404 A HOH 140 5 HOH HOH 405 A HOH 80 5 HOH HOH 406 A HOH 92 5 HOH HOH 407 A HOH 135 5 HOH HOH 408 A HOH 132 5 HOH HOH 409 A HOH 88 5 HOH HOH 410 A HOH 45 5 HOH HOH 411 A HOH 36 5 HOH HOH 412 A HOH 115 5 HOH HOH 413 A HOH 120 5 HOH HOH 414 A HOH 107 5 HOH HOH 415 A HOH 95 5 HOH HOH 416 A HOH 119 5 HOH HOH 417 A HOH 98 5 HOH HOH 418 A HOH 67 5 HOH HOH 419 A HOH 123 5 HOH HOH 420 A HOH 44 5 HOH HOH 421 A HOH 97 5 HOH HOH 422 A HOH 133 5 HOH HOH 423 A HOH 46 5 HOH HOH 424 A HOH 131 5 HOH HOH 425 A HOH 89 5 HOH HOH 426 A LYS 1 n 1 LYS 1 A VAL 2 n 2 VAL 2 A PHE 3 n 3 PHE 3 A GLY 4 n 4 GLY 4 A ARG 5 n 5 ARG 5 A CYS 6 n 6 CYS 6 A GLU 7 n 7 GLU 7 A LEU 8 n 8 LEU 8 A ALA 9 n 9 ALA 9 A ALA 10 n 10 ALA 10 A ALA 11 n 11 ALA 11 A MET 12 n 12 MET 12 A LYS 13 n 13 LYS 13 A ARG 14 n 14 ARG 14 A HIS 15 n 15 HIS 15 A GLY 16 n 16 GLY 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ASN 19 n 19 ASN 19 A TYR 20 n 20 TYR 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A TYR 23 n 23 TYR 23 A SER 24 n 24 SER 24 A LEU 25 n 25 LEU 25 A GLY 26 n 26 GLY 26 A ASN 27 n 27 ASN 27 A TRP 28 n 28 TRP 28 A VAL 29 n 29 VAL 29 A CYS 30 n 30 CYS 30 A ALA 31 n 31 ALA 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A PHE 34 n 34 PHE 34 A GLU 35 n 35 GLU 35 A SER 36 n 36 SER 36 A ASN 37 n 37 ASN 37 A PHE 38 n 38 PHE 38 A ASN 39 n 39 ASN 39 A THR 40 n 40 THR 40 A GLN 41 n 41 GLN 41 A ALA 42 n 42 ALA 42 A THR 43 n 43 THR 43 A ASN 44 n 44 ASN 44 A ARG 45 n 45 ARG 45 A ASN 46 n 46 ASN 46 A THR 47 n 47 THR 47 A ASP 48 n 48 ASP 48 A GLY 49 n 49 GLY 49 A SER 50 n 50 SER 50 A THR 51 n 51 THR 51 A ASP 52 n 52 ASP 52 A TYR 53 n 53 TYR 53 A GLY 54 n 54 GLY 54 A ILE 55 n 55 ILE 55 A LEU 56 n 56 LEU 56 A GLN 57 n 57 GLN 57 A ILE 58 n 58 ILE 58 A ASN 59 n 59 ASN 59 A SER 60 n 60 SER 60 A ARG 61 n 61 ARG 61 A TRP 62 n 62 TRP 62 A TRP 63 n 63 TRP 63 A CYS 64 n 64 CYS 64 A ASN 65 n 65 ASN 65 A ASP 66 n 66 ASP 66 A GLY 67 n 67 GLY 67 A ARG 68 n 68 ARG 68 A THR 69 n 69 THR 69 A PRO 70 n 70 PRO 70 A GLY 71 n 71 GLY 71 A SER 72 n 72 SER 72 A ARG 73 n 73 ARG 73 A ASN 74 n 74 ASN 74 A LEU 75 n 75 LEU 75 A CYS 76 n 76 CYS 76 A ASN 77 n 77 ASN 77 A ILE 78 n 78 ILE 78 A PRO 79 n 79 PRO 79 A CYS 80 n 80 CYS 80 A SER 81 n 81 SER 81 A ALA 82 n 82 ALA 82 A LEU 83 n 83 LEU 83 A LEU 84 n 84 LEU 84 A SER 85 n 85 SER 85 A SER 86 n 86 SER 86 A ASP 87 n 87 ASP 87 A ILE 88 n 88 ILE 88 A THR 89 n 89 THR 89 A ALA 90 n 90 ALA 90 A SER 91 n 91 SER 91 A VAL 92 n 92 VAL 92 A ASN 93 n 93 ASN 93 A CYS 94 n 94 CYS 94 A ALA 95 n 95 ALA 95 A LYS 96 n 96 LYS 96 A LYS 97 n 97 LYS 97 A ILE 98 n 98 ILE 98 A VAL 99 n 99 VAL 99 A SER 100 n 100 SER 100 A ASP 101 n 101 ASP 101 A GLY 102 n 102 GLY 102 A ASN 103 n 103 ASN 103 A GLY 104 n 104 GLY 104 A MET 105 n 105 MET 105 A ASN 106 n 106 ASN 106 A ALA 107 n 107 ALA 107 A TRP 108 n 108 TRP 108 A VAL 109 n 109 VAL 109 A ALA 110 n 110 ALA 110 A TRP 111 n 111 TRP 111 A ARG 112 n 112 ARG 112 A ASN 113 n 113 ASN 113 A ARG 114 n 114 ARG 114 A CYS 115 n 115 CYS 115 A LYS 116 n 116 LYS 116 A GLY 117 n 117 GLY 117 A THR 118 n 118 THR 118 A ASP 119 n 119 ASP 119 A VAL 120 n 120 VAL 120 A GLN 121 n 121 GLN 121 A ALA 122 n 122 ALA 122 A TRP 123 n 123 TRP 123 A ILE 124 n 124 ILE 124 A ARG 125 n 125 ARG 125 A GLY 126 n 126 GLY 126 A CYS 127 n 127 CYS 127 A ARG 128 n 128 ARG 128 A LEU 129 n 129 LEU 129 A author_and_software_defined_assembly PISA 1 monomeric none 570 -9 6960 A SER 60 A O SER 60 1_555 A NA 201 B NA NA 1_555 A CYS 64 A O CYS 64 1_555 89.6 A SER 60 A O SER 60 1_555 A NA 201 B NA NA 1_555 A SER 72 A OG SER 72 1_555 86.2 A CYS 64 A O CYS 64 1_555 A NA 201 B NA NA 1_555 A SER 72 A OG SER 72 1_555 162.0 A SER 60 A O SER 60 1_555 A NA 201 B NA NA 1_555 A ARG 73 A O ARG 73 1_555 97.8 A CYS 64 A O CYS 64 1_555 A NA 201 B NA NA 1_555 A ARG 73 A O ARG 73 1_555 95.2 A SER 72 A OG SER 72 1_555 A NA 201 B NA NA 1_555 A ARG 73 A O ARG 73 1_555 102.7 A SER 60 A O SER 60 1_555 A NA 201 B NA NA 1_555 A HOH 373 H O HOH 1_555 100.6 A CYS 64 A O CYS 64 1_555 A NA 201 B NA NA 1_555 A HOH 373 H O HOH 1_555 78.5 A SER 72 A OG SER 72 1_555 A NA 201 B NA NA 1_555 A HOH 373 H O HOH 1_555 85.1 A ARG 73 A O ARG 73 1_555 A NA 201 B NA NA 1_555 A HOH 373 H O HOH 1_555 160.4 A SER 60 A O SER 60 1_555 A NA 201 B NA NA 1_555 A HOH 403 H O HOH 1_555 171.7 A CYS 64 A O CYS 64 1_555 A NA 201 B NA NA 1_555 A HOH 403 H O HOH 1_555 97.2 A SER 72 A OG SER 72 1_555 A NA 201 B NA NA 1_555 A HOH 403 H O HOH 1_555 85.8 A ARG 73 A O ARG 73 1_555 A NA 201 B NA NA 1_555 A HOH 403 H O HOH 1_555 86.3 A HOH 373 H O HOH 1_555 A NA 201 B NA NA 1_555 A HOH 403 H O HOH 1_555 76.3 A HOH 305 B H O HOH 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G O6 A1IQW 1_555 74.8 A HOH 305 B H O HOH 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G N2 A1IQW 1_555 80.6 A A1IQW 206 B G O6 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G N2 A1IQW 1_555 92.2 A HOH 305 B H O HOH 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 162.2 A A1IQW 206 B G O6 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 89.9 A A1IQW 206 B G N2 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 91.2 A HOH 305 B H O HOH 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G O4 A1IQW 1_555 102.1 A A1IQW 206 B G O6 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G O4 A1IQW 1_555 87.8 A A1IQW 206 B G N2 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G O4 A1IQW 1_555 177.3 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G O4 A1IQW 1_555 86.1 A HOH 324 H O HOH 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G O5 A1IQW 1_555 84.5 A HOH 324 H O HOH 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G N1 A1IQW 1_555 82.0 A A1IQW 206 B G O5 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G N1 A1IQW 1_555 90.3 A HOH 324 H O HOH 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 169.8 A A1IQW 206 B G O5 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 89.8 A A1IQW 206 B G N1 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G RU2 A1IQW 1_555 89.6 A HOH 324 H O HOH 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G O3 A1IQW 1_555 95.6 A A1IQW 206 B G O5 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G O3 A1IQW 1_555 90.1 A A1IQW 206 B G N1 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G O3 A1IQW 1_555 177.6 A A1IQW 206 B G RU2 A1IQW 1_555 A A1IQW 206 B G RU1 A1IQW 1_555 A A1IQW 206 B G O3 A1IQW 1_555 92.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ASN 44 A N ASN 44 A O ASP 52 A O ASP 52 A N TYR 53 A N TYR 53 A O ILE 58 A O ILE 58 1 A HOH 326 H HOH 1 A HOH 345 H HOH 1 A HOH 423 H HOH 1 A HOH 425 H HOH 1 A C12 A1IQW 205 F C12 A1IQW 1 1 N 1 A C11 A1IQW 205 F C11 A1IQW 1 1 N 1 A C10 A1IQW 205 F C10 A1IQW 1 1 N 1 A C13 A1IQW 205 F C13 A1IQW 1 1 N 1 A C7 A1IQW 205 F C7 A1IQW 1 1 N 1 A C3 A1IQW 205 F C3 A1IQW 1 1 N 1 A C4 A1IQW 205 F C4 A1IQW 1 1 N 1 A C5 A1IQW 205 F C5 A1IQW 1 1 N 1 A C9 A1IQW 205 F C9 A1IQW 1 1 N 1 A C8 A1IQW 205 F C8 A1IQW 1 1 N 1 A N1 A1IQW 205 F N1 A1IQW 1 1 N 1 A N2 A1IQW 205 F N2 A1IQW 1 1 N 1 A C20 A1IQW 205 F C20 A1IQW 1 1 N 1 A C15 A1IQW 205 F C15 A1IQW 1 1 N 1 A O8 A1IQW 205 F O8 A1IQW 1 1 N 1 A C16 A1IQW 205 F C16 A1IQW 1 1 N 1 A C17 A1IQW 205 F C17 A1IQW 1 1 N 1 A F2 A1IQW 205 F F2 A1IQW 1 1 N 1 A C18 A1IQW 205 F C18 A1IQW 1 1 N 1 A C19 A1IQW 205 F C19 A1IQW 1 1 N 1 A F1 A1IQW 205 F F1 A1IQW 1 1 N 1 A ARG 45 A 0.193 SIDE CHAIN 1 13.60 2.20 113.40 127.00 A A A CA CB CG ASN ASN ASN 59 59 59 B N 1 -3.14 0.50 120.30 117.16 A A A NE CZ NH1 ARG ARG ARG 68 68 68 N 1 -4.56 0.50 120.30 115.74 A A A NE CZ NH2 ARG ARG ARG 112 112 112 A A A N 1 -4.35 0.50 120.30 115.95 A A A NE CZ NH2 ARG ARG ARG 114 114 114 N 1 A A OXT OXT LEU LEU 129 129 1.73 1_555 8_554 1 A TRP 62 -132.25 -32.28 1 A ARG 68 -141.52 16.88 22.678 -0.057 -0.000 0.000 -0.057 -0.000 0.114 0.963 0.952 Hydrogens have been added in their riding positions 0.2255 0.1927 0.194 1.420 38.945 1167 20965 22132 5.273 99.896 1.455 0.057 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.079 0.080 0.800 0.800 1.200 MASK BULK SOLVENT 1.420 38.945 126 1177 50 0 1001 0.010 0.012 1166 0.001 0.016 1026 2.024 1.833 1597 1.510 1.814 2347 6.396 5.000 144 10.555 5.000 14 12.965 10.000 189 14.264 10.000 57 0.104 0.200 155 0.010 0.020 1532 0.002 0.020 315 0.249 0.200 256 0.205 0.200 910 0.181 0.200 539 0.091 0.200 551 0.199 0.200 80 0.085 0.200 3 0.250 0.200 12 0.163 0.200 75 0.267 0.200 30 2.188 2.222 555 2.185 2.221 555 3.091 4.003 706 3.092 4.007 707 3.167 2.633 611 3.120 2.589 562 4.784 4.702 891 4.771 4.594 817 6.611 25.638 1397 6.518 23.410 1329 0.337 0.291 0.294 1.457 100 1510 1610 0.929 0.947 20 100.0000 0.250 0.349 0.272 0.276 1.497 83 1490 1573 0.925 0.956 20 100.0000 0.226 0.296 0.252 0.254 1.540 72 1437 1509 0.948 0.960 20 100.0000 0.211 0.265 0.243 0.244 1.587 80 1396 1476 0.957 0.962 20 100.0000 0.201 0.246 0.223 0.224 1.639 76 1356 1433 0.964 0.969 20 99.9302 0.186 0.262 0.234 0.235 1.697 70 1327 1398 0.958 0.966 20 99.9285 0.196 0.324 0.223 0.228 1.761 65 1283 1349 0.932 0.967 20 99.9259 0.192 0.274 0.212 0.215 1.832 56 1234 1291 0.952 0.971 20 99.9225 0.187 0.236 0.220 0.220 1.914 63 1188 1251 0.968 0.970 20 100.0000 0.203 0.247 0.184 0.187 2.007 64 1133 1198 0.965 0.978 20 99.9165 0.178 0.196 0.178 0.179 2.115 55 1075 1130 0.975 0.980 20 100.0000 0.178 0.219 0.177 0.179 2.243 57 1029 1087 0.971 0.981 20 99.9080 0.184 0.146 0.169 0.168 2.397 58 969 1028 0.983 0.983 20 99.9027 0.184 0.204 0.169 0.171 2.589 68 880 949 0.975 0.982 20 99.8946 0.185 0.210 0.171 0.172 2.834 40 856 896 0.970 0.982 20 100.0000 0.197 0.257 0.168 0.174 3.167 53 750 805 0.962 0.980 20 99.7515 0.193 0.232 0.163 0.166 3.653 41 681 724 0.960 0.985 20 99.7238 0.199 0.177 0.152 0.154 4.464 35 588 625 0.980 0.985 20 99.6800 0.198 0.202 0.224 0.223 6.272 18 476 501 0.974 0.974 20 98.6028 0.292 0.299 0.305 0.305 38.945 13 299 313 0.968 0.939 20 99.6805 0.399 1.34 38.92 29MR 26206 1.000 1 27.0 12.9 99.9 1.34 1.36 1288 0.808 1 refinement REFMAC 5.8.0431 data reduction autoPROC data scaling autoPROC phasing PHASER N X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2(D-p-FPhF)(O2CCH3)2(O2CO)] 1 N N 2 N N 3 N N 3 N N 3 N N 4 N N 4 N N 5 N N A GLY 4 A GLY 4 HELX_P A HIS 15 A HIS 15 1 AA1 12 A ASN 19 A ASN 19 HELX_P A TYR 23 A TYR 23 5 AA2 5 A SER 24 A SER 24 HELX_P A ASN 37 A ASN 37 1 AA3 14 A PRO 79 A PRO 79 HELX_P A SER 85 A SER 85 5 AA4 7 A ILE 88 A ILE 88 HELX_P A SER 100 A SER 100 1 AA5 13 A ASN 103 A ASN 103 HELX_P A ALA 107 A ALA 107 5 AA6 5 A TRP 108 A TRP 108 HELX_P A CYS 115 A CYS 115 1 AA7 8 A ASP 119 A ASP 119 HELX_P A ARG 125 A ARG 125 5 AA8 7 disulf 2.005 A CYS 6 A SG CYS 6 1_555 A CYS 127 A SG CYS 127 1_555 disulf 2.028 A CYS 30 A SG CYS 30 1_555 A CYS 115 A SG CYS 115 1_555 disulf 2.019 A CYS 64 A SG CYS 64 1_555 A CYS 80 A SG CYS 80 1_555 disulf 2.040 A CYS 76 A SG CYS 76 1_555 A CYS 94 A SG CYS 94 1_555 metalc 2.286 A SER 60 A O SER 60 1_555 A NA 201 B NA NA 1_555 metalc 2.512 A CYS 64 A O CYS 64 1_555 A NA 201 B NA NA 1_555 metalc 2.445 A SER 72 A OG SER 72 1_555 A NA 201 B NA NA 1_555 metalc 2.358 A ARG 73 A O ARG 73 1_555 A NA 201 B NA NA 1_555 metalc 2.722 A NA 201 B NA NA 1_555 A HOH 373 H O HOH 1_555 metalc 2.351 A NA 201 B NA NA 1_555 A HOH 403 H O HOH 1_555 metalc 2.001 B B A A1IQW 206 G RU2 A1IQW 1_555 A HOH 305 H O HOH 1_555 metalc 2.023 B A A1IQW 206 G RU1 A1IQW 1_555 A HOH 324 H O HOH 1_555 METAL BINDING PROTEIN ruthenium, protein interaction, metallodrug, diruthenium, METAL BINDING PROTEIN LYSC_CHICK UNP 1 19 P00698 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL 19 147 29MR 1 129 P00698 A 1 1 129 3 anti-parallel anti-parallel A THR 43 A THR 43 A ARG 45 A ARG 45 A THR 51 A THR 51 A TYR 53 A TYR 53 A ILE 58 A ILE 58 A ASN 59 A ASN 59 96 P 43 21 2