0.018115 0.000000 0.006639 0.000000 0.026430 0.000000 0.000000 0.000000 0.015831 0.00000 0.00000 0.00000 6 6 2.3103 1.0201 1.5888 0.8651 20.8439 10.2075 0.5687 51.6512 7 7 12.2220 3.1346 2.0141 1.1672 0.0057 9.8933 28.9975 0.5826 8 8 3.0487 2.2870 1.5464 0.8671 13.2771 5.7011 0.3239 32.9089 16 16 6.9054 5.2035 1.4379 1.5863 1.4679 22.2151 0.2536 56.1720 0009-0001-0807-101X Schnurr, A. 0000-0002-6366-0511 Bhattacharyya, B. 0000-0002-6424-240X May, J.F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90 110.128 90 55.204 37.836 67.276 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N N Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C N 345 N O N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing To Be Published 0353 Crystal structure of DcrB from Salmonella enterica at pH 5.0 0009-0001-0807-101X 0000-0002-6366-0511 0000-0002-6424-240X 10.2210/pdb13cz/pdb pdb_000013cz 100 1 N PIXEL 2025-12-16 DECTRIS EIGER X 9M SINGLE WAVELENGTH M x-ray 1 0.97872 1.0 21-ID-F APS 0.97872 SYNCHROTRON APS BEAMLINE 21-ID-F 17410.615 Inner membrane lipoprotein DcrB 2 man polymer 18.015 water 66 nat water no no MASGQPISLMDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQV VTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQVTLPADNQQKAQTTAENIINTLVIKGSSAWSHPQFE K MASGQPISLMDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQV VTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQVTLPADNQQKAQTTAENIINTLVIKGSSAWSHPQFE K A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 161 dcrB, STM3580 90371 Salmonella enterica subsp. enterica serovar Typhimurium 469008 Escherichia coli BL21(DE3) Biological sequence 1 1.89 35.08 VAPOR DIFFUSION, HANGING DROP 5.0 0.1 M sodium acetate pH 5.0, 34% (v/v) polyethylene glycol 5,000 293.15 repository Initial release 1 0 2026-05-13 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) 1R15GM152892-01 jmay@uwlax.edu 0000-0002-6424-240X John May F principal investigator/group leader N RCSB Y RCSB 2026-04-30 REL REL HOH water N AlphaFold in silico model HOH 12 2 HOH HOH 201 A HOH 19 2 HOH HOH 202 A HOH 8 2 HOH HOH 203 A HOH 9 2 HOH HOH 204 A HOH 63 2 HOH HOH 205 A HOH 31 2 HOH HOH 206 A HOH 5 2 HOH HOH 207 A HOH 7 2 HOH HOH 208 A HOH 24 2 HOH HOH 209 A HOH 37 2 HOH HOH 210 A HOH 21 2 HOH HOH 211 A HOH 22 2 HOH HOH 212 A HOH 25 2 HOH HOH 213 A HOH 38 2 HOH HOH 214 A HOH 11 2 HOH HOH 215 A HOH 4 2 HOH HOH 216 A HOH 2 2 HOH HOH 217 A HOH 43 2 HOH HOH 218 A HOH 28 2 HOH HOH 219 A HOH 41 2 HOH HOH 220 A HOH 58 2 HOH HOH 221 A HOH 35 2 HOH HOH 222 A HOH 17 2 HOH HOH 223 A HOH 39 2 HOH HOH 224 A HOH 65 2 HOH HOH 225 A HOH 14 2 HOH HOH 226 A HOH 20 2 HOH HOH 227 A HOH 45 2 HOH HOH 228 A HOH 29 2 HOH HOH 229 A HOH 54 2 HOH HOH 230 A HOH 10 2 HOH HOH 231 A HOH 26 2 HOH HOH 232 A HOH 50 2 HOH HOH 233 A HOH 62 2 HOH HOH 234 A HOH 15 2 HOH HOH 235 A HOH 53 2 HOH HOH 236 A HOH 13 2 HOH HOH 237 A HOH 47 2 HOH HOH 238 A HOH 66 2 HOH HOH 239 A HOH 6 2 HOH HOH 201 B HOH 18 2 HOH HOH 202 B HOH 57 2 HOH HOH 203 B HOH 42 2 HOH HOH 204 B HOH 27 2 HOH HOH 205 B HOH 44 2 HOH HOH 206 B HOH 56 2 HOH HOH 207 B HOH 3 2 HOH HOH 208 B HOH 36 2 HOH HOH 209 B HOH 30 2 HOH HOH 210 B HOH 49 2 HOH HOH 211 B HOH 23 2 HOH HOH 212 B HOH 32 2 HOH HOH 213 B HOH 46 2 HOH HOH 214 B HOH 33 2 HOH HOH 215 B HOH 1 2 HOH HOH 216 B HOH 64 2 HOH HOH 217 B HOH 61 2 HOH HOH 218 B HOH 59 2 HOH HOH 219 B HOH 55 2 HOH HOH 220 B HOH 40 2 HOH HOH 221 B HOH 16 2 HOH HOH 222 B HOH 48 2 HOH HOH 223 B HOH 51 2 HOH HOH 224 B HOH 34 2 HOH HOH 225 B HOH 60 2 HOH HOH 226 B HOH 52 2 HOH HOH 227 B n 1 37 A n 2 38 A n 3 39 A GLY 40 n 4 GLY 40 A GLN 41 n 5 GLN 41 A PRO 42 n 6 PRO 42 A ILE 43 n 7 ILE 43 A SER 44 n 8 SER 44 A LEU 45 n 9 LEU 45 A MET 46 n 10 MET 46 A ASP 47 n 11 ASP 47 A GLY 48 n 12 GLY 48 A LYS 49 n 13 LYS 49 A LEU 50 n 14 LEU 50 A SER 51 n 15 SER 51 A PHE 52 n 16 PHE 52 A SER 53 n 17 SER 53 A LEU 54 n 18 LEU 54 A PRO 55 n 19 PRO 55 A ALA 56 n 20 ALA 56 A ASP 57 n 21 ASP 57 A MET 58 n 22 MET 58 A THR 59 n 23 THR 59 A ASP 60 n 24 ASP 60 A GLN 61 n 25 GLN 61 A SER 62 n 26 SER 62 A GLY 63 n 27 GLY 63 A LYS 64 n 28 LYS 64 A LEU 65 n 29 LEU 65 A GLY 66 n 30 GLY 66 A THR 67 n 31 THR 67 A GLN 68 n 32 GLN 68 A ALA 69 n 33 ALA 69 A ASN 70 n 34 ASN 70 A ASN 71 n 35 ASN 71 A MET 72 n 36 MET 72 A HIS 73 n 37 HIS 73 A VAL 74 n 38 VAL 74 A TYR 75 n 39 TYR 75 A SER 76 n 40 SER 76 A ASP 77 n 41 ASP 77 A PRO 78 n 42 PRO 78 A THR 79 n 43 THR 79 A GLY 80 n 44 GLY 80 A GLN 81 n 45 GLN 81 A LYS 82 n 46 LYS 82 A ALA 83 n 47 ALA 83 A VAL 84 n 48 VAL 84 A ILE 85 n 49 ILE 85 A VAL 86 n 50 VAL 86 A ILE 87 n 51 ILE 87 A VAL 88 n 52 VAL 88 A GLY 89 n 53 GLY 89 A ASP 90 n 54 ASP 90 A ASN 91 n 55 ASN 91 A THR 92 n 56 THR 92 A ASP 93 n 57 ASP 93 A GLU 94 n 58 GLU 94 A ALA 95 n 59 ALA 95 A LEU 96 n 60 LEU 96 A PRO 97 n 61 PRO 97 A VAL 98 n 62 VAL 98 A LEU 99 n 63 LEU 99 A ALA 100 n 64 ALA 100 A ASN 101 n 65 ASN 101 A ARG 102 n 66 ARG 102 A LEU 103 n 67 LEU 103 A LEU 104 n 68 LEU 104 A GLU 105 n 69 GLU 105 A GLN 106 n 70 GLN 106 A GLN 107 n 71 GLN 107 A ARG 108 n 72 ARG 108 A SER 109 n 73 SER 109 A ARG 110 n 74 ARG 110 A ASP 111 n 75 ASP 111 A PRO 112 n 76 PRO 112 A GLN 113 n 77 GLN 113 A LEU 114 n 78 LEU 114 A GLN 115 n 79 GLN 115 A VAL 116 n 80 VAL 116 A VAL 117 n 81 VAL 117 A THR 118 n 82 THR 118 A ASN 119 n 83 ASN 119 A LYS 120 n 84 LYS 120 A SER 121 n 85 SER 121 A ILE 122 n 86 ILE 122 A GLU 123 n 87 GLU 123 A LEU 124 n 88 LEU 124 A LYS 125 n 89 LYS 125 A GLY 126 n 90 GLY 126 A HIS 127 n 91 HIS 127 A THR 128 n 92 THR 128 A LEU 129 n 93 LEU 129 A GLN 130 n 94 GLN 130 A GLN 131 n 95 GLN 131 A LEU 132 n 96 LEU 132 A ASP 133 n 97 ASP 133 A SER 134 n 98 SER 134 A ILE 135 n 99 ILE 135 A ILE 136 n 100 ILE 136 A SER 137 n 101 SER 137 A ALA 138 n 102 ALA 138 A LYS 139 n 103 LYS 139 A GLY 140 n 104 GLY 140 A GLN 141 n 105 GLN 141 A THR 142 n 106 THR 142 A ALA 143 n 107 ALA 143 A TYR 144 n 108 TYR 144 A SER 145 n 109 SER 145 A SER 146 n 110 SER 146 A ILE 147 n 111 ILE 147 A VAL 148 n 112 VAL 148 A LEU 149 n 113 LEU 149 A GLY 150 n 114 GLY 150 A LYS 151 n 115 LYS 151 A VAL 152 n 116 VAL 152 A ASP 153 n 117 ASP 153 A ASN 154 n 118 ASN 154 A GLN 155 n 119 GLN 155 A LEU 156 n 120 LEU 156 A LEU 157 n 121 LEU 157 A THR 158 n 122 THR 158 A ILE 159 n 123 ILE 159 A GLN 160 n 124 GLN 160 A VAL 161 n 125 VAL 161 A THR 162 n 126 THR 162 A LEU 163 n 127 LEU 163 A PRO 164 n 128 PRO 164 A ALA 165 n 129 ALA 165 A ASP 166 n 130 ASP 166 A ASN 167 n 131 ASN 167 A GLN 168 n 132 GLN 168 A GLN 169 n 133 GLN 169 A LYS 170 n 134 LYS 170 A ALA 171 n 135 ALA 171 A GLN 172 n 136 GLN 172 A THR 173 n 137 THR 173 A THR 174 n 138 THR 174 A ALA 175 n 139 ALA 175 A GLU 176 n 140 GLU 176 A ASN 177 n 141 ASN 177 A ILE 178 n 142 ILE 178 A ILE 179 n 143 ILE 179 A ASN 180 n 144 ASN 180 A THR 181 n 145 THR 181 A LEU 182 n 146 LEU 182 A VAL 183 n 147 VAL 183 A ILE 184 n 148 ILE 184 A LYS 185 n 149 LYS 185 A GLY 186 n 150 GLY 186 A SER 187 n 151 SER 187 A SER 188 n 152 SER 188 A ALA 189 n 153 ALA 189 A n 154 190 A n 155 191 A n 156 192 A n 157 193 A n 158 194 A n 159 195 A n 160 196 A n 161 197 A n 1 37 B n 2 38 B n 3 39 B GLY 40 n 4 GLY 40 B GLN 41 n 5 GLN 41 B PRO 42 n 6 PRO 42 B ILE 43 n 7 ILE 43 B SER 44 n 8 SER 44 B LEU 45 n 9 LEU 45 B MET 46 n 10 MET 46 B ASP 47 n 11 ASP 47 B GLY 48 n 12 GLY 48 B LYS 49 n 13 LYS 49 B LEU 50 n 14 LEU 50 B SER 51 n 15 SER 51 B PHE 52 n 16 PHE 52 B SER 53 n 17 SER 53 B LEU 54 n 18 LEU 54 B PRO 55 n 19 PRO 55 B ALA 56 n 20 ALA 56 B ASP 57 n 21 ASP 57 B MET 58 n 22 MET 58 B THR 59 n 23 THR 59 B ASP 60 n 24 ASP 60 B GLN 61 n 25 GLN 61 B SER 62 n 26 SER 62 B GLY 63 n 27 GLY 63 B LYS 64 n 28 LYS 64 B LEU 65 n 29 LEU 65 B GLY 66 n 30 GLY 66 B THR 67 n 31 THR 67 B GLN 68 n 32 GLN 68 B ALA 69 n 33 ALA 69 B ASN 70 n 34 ASN 70 B ASN 71 n 35 ASN 71 B MET 72 n 36 MET 72 B HIS 73 n 37 HIS 73 B VAL 74 n 38 VAL 74 B TYR 75 n 39 TYR 75 B SER 76 n 40 SER 76 B ASP 77 n 41 ASP 77 B PRO 78 n 42 PRO 78 B THR 79 n 43 THR 79 B GLY 80 n 44 GLY 80 B GLN 81 n 45 GLN 81 B LYS 82 n 46 LYS 82 B ALA 83 n 47 ALA 83 B VAL 84 n 48 VAL 84 B ILE 85 n 49 ILE 85 B VAL 86 n 50 VAL 86 B ILE 87 n 51 ILE 87 B VAL 88 n 52 VAL 88 B GLY 89 n 53 GLY 89 B ASP 90 n 54 ASP 90 B ASN 91 n 55 ASN 91 B THR 92 n 56 THR 92 B ASP 93 n 57 ASP 93 B GLU 94 n 58 GLU 94 B ALA 95 n 59 ALA 95 B LEU 96 n 60 LEU 96 B PRO 97 n 61 PRO 97 B VAL 98 n 62 VAL 98 B LEU 99 n 63 LEU 99 B ALA 100 n 64 ALA 100 B ASN 101 n 65 ASN 101 B ARG 102 n 66 ARG 102 B LEU 103 n 67 LEU 103 B LEU 104 n 68 LEU 104 B GLU 105 n 69 GLU 105 B GLN 106 n 70 GLN 106 B GLN 107 n 71 GLN 107 B ARG 108 n 72 ARG 108 B SER 109 n 73 SER 109 B ARG 110 n 74 ARG 110 B ASP 111 n 75 ASP 111 B PRO 112 n 76 PRO 112 B GLN 113 n 77 GLN 113 B LEU 114 n 78 LEU 114 B GLN 115 n 79 GLN 115 B VAL 116 n 80 VAL 116 B VAL 117 n 81 VAL 117 B THR 118 n 82 THR 118 B ASN 119 n 83 ASN 119 B LYS 120 n 84 LYS 120 B SER 121 n 85 SER 121 B ILE 122 n 86 ILE 122 B GLU 123 n 87 GLU 123 B LEU 124 n 88 LEU 124 B LYS 125 n 89 LYS 125 B GLY 126 n 90 GLY 126 B HIS 127 n 91 HIS 127 B THR 128 n 92 THR 128 B LEU 129 n 93 LEU 129 B GLN 130 n 94 GLN 130 B GLN 131 n 95 GLN 131 B LEU 132 n 96 LEU 132 B ASP 133 n 97 ASP 133 B SER 134 n 98 SER 134 B ILE 135 n 99 ILE 135 B ILE 136 n 100 ILE 136 B SER 137 n 101 SER 137 B ALA 138 n 102 ALA 138 B LYS 139 n 103 LYS 139 B GLY 140 n 104 GLY 140 B GLN 141 n 105 GLN 141 B THR 142 n 106 THR 142 B ALA 143 n 107 ALA 143 B TYR 144 n 108 TYR 144 B SER 145 n 109 SER 145 B SER 146 n 110 SER 146 B ILE 147 n 111 ILE 147 B VAL 148 n 112 VAL 148 B LEU 149 n 113 LEU 149 B GLY 150 n 114 GLY 150 B LYS 151 n 115 LYS 151 B VAL 152 n 116 VAL 152 B ASP 153 n 117 ASP 153 B ASN 154 n 118 ASN 154 B GLN 155 n 119 GLN 155 B LEU 156 n 120 LEU 156 B LEU 157 n 121 LEU 157 B THR 158 n 122 THR 158 B ILE 159 n 123 ILE 159 B GLN 160 n 124 GLN 160 B VAL 161 n 125 VAL 161 B THR 162 n 126 THR 162 B LEU 163 n 127 LEU 163 B PRO 164 n 128 PRO 164 B ALA 165 n 129 ALA 165 B ASP 166 n 130 ASP 166 B ASN 167 n 131 ASN 167 B GLN 168 n 132 GLN 168 B GLN 169 n 133 GLN 169 B LYS 170 n 134 LYS 170 B ALA 171 n 135 ALA 171 B GLN 172 n 136 GLN 172 B THR 173 n 137 THR 173 B THR 174 n 138 THR 174 B ALA 175 n 139 ALA 175 B GLU 176 n 140 GLU 176 B ASN 177 n 141 ASN 177 B ILE 178 n 142 ILE 178 B ILE 179 n 143 ILE 179 B ASN 180 n 144 ASN 180 B THR 181 n 145 THR 181 B LEU 182 n 146 LEU 182 B VAL 183 n 147 VAL 183 B ILE 184 n 148 ILE 184 B LYS 185 n 149 LYS 185 B GLY 186 n 150 GLY 186 B SER 187 n 151 SER 187 B SER 188 n 152 SER 188 B ALA 189 n 153 ALA 189 B TRP 190 n 154 TRP 190 B SER 191 n 155 SER 191 B n 156 192 B n 157 193 B n 158 194 B n 159 195 B n 160 196 B n 161 197 B 2.8020 0.8749 1.7255 1.9147 0.9827 2.9106 -0.3018 0.4828 0.4421 -0.3708 0.0631 -0.0275 -0.1981 0.0354 0.2387 0.2733 -0.0252 -0.0625 0.2020 0.0391 0.1772 refined 5.2340 7.5870 6.2270 X-RAY DIFFRACTION 20.3862 -0.5983 -0.2159 5.0911 1.0947 0.2362 -0.2675 -0.3737 0.1055 -0.0253 0.2245 0.1850 -0.0084 0.0426 0.0430 0.0542 0.0683 0.0008 0.1594 -0.0464 0.2480 refined -8.8270 6.6020 13.9520 X-RAY DIFFRACTION 2.8423 -0.0671 1.7289 2.2756 1.3903 5.9300 0.2113 -0.1836 -0.0972 0.0075 -0.0136 0.1901 0.1914 -0.2058 -0.1977 0.0778 -0.0068 -0.0436 0.0621 -0.0049 0.0564 refined 1.6670 1.6330 14.2320 X-RAY DIFFRACTION 18.5002 15.9793 4.8669 30.9868 13.8778 8.1246 -0.7580 -1.1769 -0.5311 1.4521 -0.2421 1.4807 0.8298 0.2142 1.0001 0.3624 0.0781 0.2407 0.1773 0.1231 0.2688 refined 5.1850 -8.2780 25.6820 X-RAY DIFFRACTION 4.3510 2.9237 0.0587 13.1589 0.6716 0.3301 -0.0419 -0.2051 -0.1727 0.0452 0.0976 0.0918 0.1458 0.0675 -0.0557 0.0980 0.0016 -0.0460 0.0677 0.0148 0.0370 refined 12.0080 -7.3890 18.0210 X-RAY DIFFRACTION 4.3064 1.3686 1.6109 5.4960 0.0707 1.5540 0.1959 0.3391 -0.3474 -0.2254 0.0866 -0.1363 0.1664 0.1921 -0.2825 0.0844 0.0402 -0.0483 0.0853 -0.0344 0.0664 refined 9.4120 -1.9090 12.5390 X-RAY DIFFRACTION 11.5476 -5.9177 7.5742 6.3856 -1.7597 21.5668 0.2294 -0.2354 -0.3859 -0.4144 -0.4603 0.2278 1.5270 -0.2206 0.2309 0.2965 -0.0489 0.0472 0.2704 -0.0304 0.3749 refined -19.9400 -9.8850 18.3460 X-RAY DIFFRACTION 11.2571 -2.3985 0.6341 2.9828 -1.5861 6.1087 0.2634 0.5615 -0.1555 -0.3864 -0.5404 -0.3274 0.0972 -0.0260 0.2770 0.1383 0.0178 0.0629 0.1886 -0.0222 0.1664 refined -12.0860 -3.4390 11.2740 X-RAY DIFFRACTION 1.4500 -0.2019 0.1900 4.3410 -2.1202 3.2891 0.0251 0.0446 0.2350 0.1426 -0.1360 -0.1446 -0.0538 0.1097 0.1109 0.0635 -0.0067 0.0049 0.1011 -0.0220 0.1214 refined -20.0680 9.7520 22.0000 X-RAY DIFFRACTION 3.3652 0.2118 1.1154 4.2934 -2.5503 2.3128 0.0521 0.1138 -0.0679 -0.1908 0.0677 0.1773 0.0734 -0.1026 -0.1198 0.0805 0.0340 -0.0277 0.1593 -0.1297 0.1380 refined -25.0180 0.1090 16.9990 X-RAY DIFFRACTION A 40 A 61 X-RAY DIFFRACTION 1 ALL A 62 A 71 X-RAY DIFFRACTION 2 ALL A 72 A 95 X-RAY DIFFRACTION 3 ALL A 96 A 110 X-RAY DIFFRACTION 4 ALL A 111 A 138 X-RAY DIFFRACTION 5 ALL A 139 A 189 X-RAY DIFFRACTION 6 ALL B 40 B 54 X-RAY DIFFRACTION 7 ALL B 55 B 88 X-RAY DIFFRACTION 8 ALL B 89 B 152 X-RAY DIFFRACTION 9 ALL B 153 B 191 X-RAY DIFFRACTION 10 ALL author_and_software_defined_assembly PISA 2 dimeric cross-linking 1910 -9 14940 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 45 A N LEU 9 A O LEU 50 A O LEU 14 A N SER 51 A N SER 15 A O VAL 183 A O VAL 147 A N THR 59 A N THR 23 A O SER 76 A O SER 40 A N HIS 73 A N HIS 37 A O VAL 86 A O VAL 50 A N ILE 87 A N ILE 51 A O THR 158 A O THR 122 A O LEU 157 A O LEU 121 A N GLY 150 A N GLY 114 A O SER 145 A O SER 109 A N SER 134 A N SER 98 A O GLN 131 A O GLN 95 A N LYS 120 A N LYS 84 B N LEU 45 B N LEU 9 B O LEU 50 B O LEU 14 B N SER 51 B N SER 15 B O VAL 183 B O VAL 147 B N THR 59 B N THR 23 B O SER 76 B O SER 40 B N HIS 73 B N HIS 37 B O VAL 86 B O VAL 50 B N GLY 89 B N GLY 53 B O LEU 156 B O LEU 120 B O LEU 157 B O LEU 121 B N GLY 150 B N GLY 114 B O SER 145 B O SER 109 B N SER 134 B N SER 98 B O LEU 129 B O LEU 93 B N ILE 122 B N ILE 86 1 A MET 37 A MET 1 1 Y 1 A ALA 38 A ALA 2 1 Y 1 A SER 39 A SER 3 1 Y 1 A TRP 190 A TRP 154 1 Y 1 A SER 191 A SER 155 1 Y 1 A HIS 192 A HIS 156 1 Y 1 A PRO 193 A PRO 157 1 Y 1 A GLN 194 A GLN 158 1 Y 1 A PHE 195 A PHE 159 1 Y 1 A GLU 196 A GLU 160 1 Y 1 A LYS 197 A LYS 161 1 Y 1 B MET 37 B MET 1 1 Y 1 B ALA 38 B ALA 2 1 Y 1 B SER 39 B SER 3 1 Y 1 B HIS 192 B HIS 156 1 Y 1 B PRO 193 B PRO 157 1 Y 1 B GLN 194 B GLN 158 1 Y 1 B PHE 195 B PHE 159 1 Y 1 B GLU 196 B GLU 160 1 Y 1 B LYS 197 B LYS 161 1 Y 1 B ARG 102 0.086 SIDE CHAIN 1 A LEU 114 -36.48 128.61 1 A ASP 153 53.21 -123.38 1 A ALA 165 -96.42 42.67 1 B THR 67 -88.53 36.34 1 B ALA 69 -58.83 -3.30 1 B ASN 154 74.75 -6.47 44.506 -1.952 0.000 0.321 0.277 0.000 1.135 0.957 0.933 Hydrogens have not been used 0.2384 0.1876 0.190 2.136 34.671 757 13981 14738 5.136 99.642 13.129 0.161 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.290 0.212 0.800 0.800 1.200 MASK BULK SOLVENT 2.136 34.671 66 2336 0 0 2270 0.008 0.012 2292 1.912 1.787 3111 6.785 5.000 300 8.404 5.000 6 14.663 10.000 422 12.949 10.000 95 0.135 0.200 384 0.008 0.020 1670 0.181 0.200 833 0.274 0.200 1547 0.131 0.200 124 0.193 0.200 63 0.111 0.200 9 2.692 2.346 1206 4.221 4.216 1504 4.114 2.903 1086 6.381 5.068 1607 8.739 31.705 3233 0.151 0.050 3919 1 A 1 X-RAY DIFFRACTION Local ncs 0.15124 0.05006 2 B 1 X-RAY DIFFRACTION Local ncs 0.15124 0.05006 0.276 0.242 0.244 2.191 59 978 1086 0.956 0.956 20 95.4880 0.232 0.296 0.225 0.229 2.251 65 984 1049 0.946 0.965 20 100.0000 0.211 0.261 0.214 0.215 2.316 38 972 1010 0.958 0.969 20 100.0000 0.198 0.231 0.188 0.191 2.387 64 951 1015 0.967 0.978 20 100.0000 0.173 0.298 0.204 0.209 2.465 52 900 952 0.940 0.972 20 100.0000 0.186 0.250 0.197 0.200 2.551 44 882 926 0.957 0.974 20 100.0000 0.183 0.259 0.188 0.191 2.647 36 862 898 0.953 0.978 20 100.0000 0.179 0.222 0.184 0.185 2.754 41 839 880 0.966 0.980 20 100.0000 0.173 0.242 0.175 0.179 2.876 46 791 837 0.959 0.980 20 100.0000 0.167 0.259 0.189 0.192 3.015 37 746 783 0.950 0.977 20 100.0000 0.186 0.232 0.178 0.180 3.177 31 742 773 0.964 0.981 20 100.0000 0.179 0.289 0.183 0.188 3.368 30 701 731 0.936 0.979 20 100.0000 0.189 0.247 0.169 0.172 3.598 33 634 667 0.960 0.984 20 100.0000 0.184 0.234 0.167 0.170 3.883 32 615 647 0.975 0.983 20 100.0000 0.181 0.198 0.190 0.190 4.248 23 572 595 0.977 0.980 20 100.0000 0.214 0.249 0.164 0.168 4.740 25 506 531 0.974 0.985 20 100.0000 0.205 0.211 0.186 0.188 5.457 40 434 474 0.975 0.978 20 100.0000 0.223 0.256 0.239 0.240 6.642 35 372 407 0.973 0.972 20 100.0000 0.277 0.191 0.209 0.208 9.225 16 309 325 0.978 0.979 20 100.0000 0.253 0.150 0.163 0.163 34.671 10 191 202 0.988 0.984 20 99.5049 0.299 2.136 37.84 13CZ 14748 0.996 0.118 1 6.97 6.6 99.74 0.491 2.136 2.17 1.9 688 0.849 1 93.35 refinement REFMAC 5.8.0431 (refmacat 0.4.126) data reduction DIALS 3.21 data scaling Aimless 0.8.2 phasing PHASER 2.8.3 N Crystal structure of DcrB from Salmonella enterica at pH 5.0 1 N N 1 N N 2 N N 2 N N A MET 46 A MET 10 HELX_P A GLY 48 A GLY 12 5 AA1 3 A SER 62 A SER 26 HELX_P A GLY 66 A GLY 30 5 AA2 5 A ALA 95 A ALA 59 HELX_P A ASP 111 A ASP 75 1 AA3 17 A ASN 167 A ASN 131 HELX_P A ASN 180 A ASN 144 1 AA4 14 B MET 46 B MET 10 HELX_P B GLY 48 B GLY 12 5 AA5 3 B SER 62 B SER 26 HELX_P B ALA 69 B ALA 33 5 AA6 8 B ALA 95 B ALA 59 HELX_P B ASP 111 B ASP 75 1 AA7 17 B ASN 167 B ASN 131 HELX_P B ASN 180 B ASN 144 1 AA8 14 UNKNOWN FUNCTION DUF1795 domain-containing protein, UNKNOWN FUNCTION A B A GLY 40 A GLY 4 A SER 188 A SER 152 B GLY 40 B GLY 4 B SER 188 B SER 152 Local NCS retraints between domains: 1 2 Q7CPJ3_SALTY UNP 1 38 Q7CPJ3 ASGQPISLMDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQVV TNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQVTLPADNQQKAQTTAENIINTLVIK 38 185 13CZ 38 185 Q7CPJ3 A 1 2 149 38 185 13CZ 38 185 Q7CPJ3 B 1 2 149 1 initiating methionine MET 37 13CZ A Q7CPJ3 UNP 1 1 expression tag GLY 186 13CZ A Q7CPJ3 UNP 150 1 expression tag SER 187 13CZ A Q7CPJ3 UNP 151 1 expression tag SER 188 13CZ A Q7CPJ3 UNP 152 1 expression tag ALA 189 13CZ A Q7CPJ3 UNP 153 1 expression tag TRP 190 13CZ A Q7CPJ3 UNP 154 1 expression tag SER 191 13CZ A Q7CPJ3 UNP 155 1 expression tag HIS 192 13CZ A Q7CPJ3 UNP 156 1 expression tag PRO 193 13CZ A Q7CPJ3 UNP 157 1 expression tag GLN 194 13CZ A Q7CPJ3 UNP 158 1 expression tag PHE 195 13CZ A Q7CPJ3 UNP 159 1 expression tag GLU 196 13CZ A Q7CPJ3 UNP 160 1 expression tag LYS 197 13CZ A Q7CPJ3 UNP 161 2 initiating methionine MET 37 13CZ B Q7CPJ3 UNP 1 2 expression tag GLY 186 13CZ B Q7CPJ3 UNP 150 2 expression tag SER 187 13CZ B Q7CPJ3 UNP 151 2 expression tag SER 188 13CZ B Q7CPJ3 UNP 152 2 expression tag ALA 189 13CZ B Q7CPJ3 UNP 153 2 expression tag TRP 190 13CZ B Q7CPJ3 UNP 154 2 expression tag SER 191 13CZ B Q7CPJ3 UNP 155 2 expression tag HIS 192 13CZ B Q7CPJ3 UNP 156 2 expression tag PRO 193 13CZ B Q7CPJ3 UNP 157 2 expression tag GLN 194 13CZ B Q7CPJ3 UNP 158 2 expression tag PHE 195 13CZ B Q7CPJ3 UNP 159 2 expression tag GLU 196 13CZ B Q7CPJ3 UNP 160 2 expression tag LYS 197 13CZ B Q7CPJ3 UNP 161 3 7 3 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLN 41 A GLN 5 A LEU 45 A LEU 9 A LEU 50 A LEU 14 A LEU 54 A LEU 18 A VAL 183 A VAL 147 A ILE 184 A ILE 148 A THR 59 A THR 23 A ASP 60 A ASP 24 A MET 72 A MET 36 A SER 76 A SER 40 A ALA 83 A ALA 47 A ASP 90 A ASP 54 A GLN 155 A GLN 119 A PRO 164 A PRO 128 A GLN 141 A GLN 105 A VAL 152 A VAL 116 A HIS 127 A HIS 91 A ALA 138 A ALA 102 A GLN 115 A GLN 79 A LEU 124 A LEU 88 B GLN 41 B GLN 5 B LEU 45 B LEU 9 B LEU 50 B LEU 14 B LEU 54 B LEU 18 B VAL 183 B VAL 147 B ILE 184 B ILE 148 B THR 59 B THR 23 B ASP 60 B ASP 24 B MET 72 B MET 36 B SER 76 B SER 40 B ALA 83 B ALA 47 B ASN 91 B ASN 55 B GLN 155 B GLN 119 B PRO 164 B PRO 128 B GLN 141 B GLN 105 B VAL 152 B VAL 116 B HIS 127 B HIS 91 B ALA 138 B ALA 102 B GLN 115 B GLN 79 B LEU 124 B LEU 88 4 P 1 21 1