0.007981 0.000000 0.001010 0.000000 0.015185 0.000000 0.000000 0.000000 0.021534 0.00000 0.00000 0.00000 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 6.96715 11.43723 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 7.96527 9.05267 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.51135 5.44231 1.42069 35.72801 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.55732 6.39887 1.23737 29.19336 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 27.87530 3.31736 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. Horton, J.R. Cheng, X. Zhou, J. Lee, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 97.209 90.000 125.290 65.854 46.809 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C8 H19 N O5 209.240 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL BIS-TRIS BUFFER non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking UNKNOWN ATOM OR ION non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N O N 76 N C N 77 N C N 78 N O N 79 N C N 80 N O N 81 N N N 82 N C N 83 N C N 84 N O N 85 N C N 86 N C N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 R C N 109 N C N 110 N O N 111 N C N 112 N S N 113 N O N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N O N 122 N P N 123 N O N 124 N O N 125 N O N 126 N C N 127 R C N 128 N O N 129 S C N 130 N O N 131 N C N 132 R C Y 133 N N Y 134 N C Y 135 N N Y 136 N C Y 137 N C N 138 N N Y 139 N N Y 140 N C Y 141 N N Y 142 N C N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N O N 158 N P N 159 N O N 160 N O N 161 N O N 162 N C N 163 R C N 164 N O N 165 S C N 166 N O N 167 N C N 168 R C N 169 N N N 170 N C N 171 N O N 172 N N N 173 N C N 174 N N N 175 N C N 176 N C N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N O N 192 N P N 193 N O N 194 N O N 195 N O N 196 N C N 197 R C N 198 N O N 199 S C N 200 N O N 201 N C N 202 R C Y 203 N N Y 204 N C Y 205 N N Y 206 N C N 207 N C N 208 N O N 209 N N N 210 N C N 211 N N N 212 N N Y 213 N C N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N O N 229 N P N 230 N O N 231 N O N 232 N O N 233 N C N 234 R C N 235 N O N 236 S C N 237 N O N 238 N C N 239 R C N 240 N N N 241 N C N 242 N O N 243 N N N 244 N C N 245 N O N 246 N C N 247 N C N 248 N C N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N C N 265 N O N 266 N C N 267 N O N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N C N 281 N O N 282 N N N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C N 299 N C N 300 N C N 301 N O N 302 N O N 303 N O N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 N C N 315 N C N 316 N O N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N N N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N O N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 S C N 352 N C N 353 N C N 354 N C N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C N 374 N C N 375 N C N 376 N C N 377 N O N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N N N 392 S C N 393 N C N 394 N O N 395 N C N 396 N C N 397 N C N 398 N C N 399 N N N 400 N O N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N S N 423 N C N 424 N O N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N N N 437 S C N 438 N C N 439 N O N 440 N C Y 441 N C Y 442 N C Y 443 N C Y 444 N C Y 445 N C Y 446 N C N 447 N O N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N N N 460 S C N 461 N C N 462 N O N 463 N C N 464 N C N 465 N C N 466 N O N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N N N 477 S C N 478 N C N 479 N O N 480 N C N 481 N O N 482 N O N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N N N 491 S C N 492 N C N 493 N O N 494 R C N 495 N O N 496 N C N 497 N O N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N N N 508 S C N 509 N C N 510 N O N 511 N C Y 512 N C Y 513 N C Y 514 N C Y 515 N C Y 516 N C Y 517 N C N 518 N O N 519 N O N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N N N 532 S C N 533 N C N 534 N O N 535 N C N 536 N C N 537 N C N 538 N O N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 550 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing Y 138 N sing Y 139 N sing Y 140 N doub N 141 N sing Y 142 N sing Y 143 N sing Y 144 N doub N 145 N sing Y 146 N doub N 147 N sing N 148 N sing Y 149 N sing Y 150 N doub N 151 N sing Y 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N doub N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing Y 211 N sing Y 212 N sing Y 213 N doub N 214 N sing Y 215 N sing N 216 N sing Y 217 N doub N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N doub N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N doub N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N sing Y 331 N doub Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing Y 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N doub N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N doub N 434 N sing N 435 N sing N 436 N sing N 437 N sing Y 438 N doub Y 439 N sing Y 440 N sing N 441 N sing Y 442 N doub N 443 N sing Y 444 N doub N 445 N sing Y 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N doub N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N doub N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N doub N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N doub N 503 N sing N 504 N sing N 505 N sing N 506 N sing Y 507 N doub Y 508 N sing Y 509 N sing N 510 N sing Y 511 N doub N 512 N sing Y 513 N doub N 514 N sing Y 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N doub N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing US Biorxiv 2692-8205 10.64898/2026.05.01.721897 42232506 Bipartite DNA binding domain of transcription factor BCL11B binds clustered short DNA sequence motifs. 2026 0009-0004-2163-3015 0000-0003-4104-7158 0000-0001-9749-8068 0000-0002-0298-2832 0000-0002-9533-4761 0000-0001-5950-9168 0000-0002-0873-0724 0000-0002-6160-7688 0000-0002-6967-6362 10.2210/pdb12uq/pdb pdb_000012uq 100 1 N PIXEL 2026-02-06 DECTRIS EIGER X 9M SINGLE WAVELENGTH M x-ray 1 0.919901 1.0 17-ID APS 0.919901 SYNCHROTRON APS BEAMLINE 17-ID 6077.903 Strand Top 1 syn polymer 6194.007 Strand Bottom 1 syn polymer 7390.648 B-cell lymphoma/leukemia 11B domains ZF2-3 2 man polymer 62.068 1,2-ETHANEDIOL 3 syn non-polymer 209.240 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 1 syn non-polymer 65.409 UNKNOWN LIGAND 2 syn non-polymer 65.409 ZINC ION 4 nat non-polymer 18.015 water 5 nat water BCL-11B,B-cell CLL/lymphoma 11B,COUP-TF-interacting protein 2,Radiation-induced tumor suppressor gene 1 protein,hRit1 no no (DT)(DC)(DC)(DT)(DG)(DT)(DC)(DC)(DC)(DC)(DT)(DG)(DG)(DC)(DC)(DT)(DG)(DA)(DG)(DG) TCCTGTCCCCTGGCCTGAGG A polydeoxyribonucleotide no no (DC)(DC)(DT)(DC)(DA)(DG)(DG)(DC)(DC)(DA)(DG)(DG)(DG)(DG)(DA)(DC)(DA)(DG)(DG)(DA) CCTCAGGCCAGGGGACAGGA B polydeoxyribonucleotide no no GPLGSPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGS GPLGSPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGS F,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 1 66 BCL11B, CTIP2, RIT1 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) Gold Plus Biological sequence 1 3.54 65.26 VAPOR DIFFUSION, SITTING DROP 5.8 26 % w/v PEG 2000 MME, 0.1 M Bis-Tris pH 5.8 292 -10.179 1 20 A 1 B 20 13.569 A_DT1:DA20_B 1 -16.082 0.878 -0.202 -0.094 -0.123 1 19 A 2 B 19 11.461 A_DC2:DG19_B 2 -20.297 -0.087 -0.752 -0.123 -18.745 1 19 A 3 B 18 -0.179 A_DC3:DG18_B 3 -9.060 -0.021 0.810 0.013 -0.962 1 20 A 4 B 17 -7.036 A_DT4:DA17_B 4 -12.631 -0.419 -0.601 -0.130 -7.424 1 19 A 5 B 16 -2.875 A_DG5:DC16_B 5 -10.818 -0.778 0.781 -0.352 -8.251 1 20 A 6 B 15 -5.835 A_DT6:DA15_B 6 -2.734 -0.772 1.143 -0.329 -5.024 1 19 A 7 B 14 -2.078 A_DC7:DG14_B 7 -15.727 -0.229 0.083 -0.092 -10.066 1 19 A 8 B 13 -5.086 A_DC8:DG13_B 8 -12.809 0.432 0.528 -0.227 0.519 1 19 A 9 B 12 -1.695 A_DC9:DG12_B 9 0.730 0.551 0.787 -0.279 9.936 1 19 A 10 B 11 -2.714 A_DC10:DG11_B 10 -5.029 0.193 0.974 -0.264 4.677 1 20 A 11 B 10 1.941 A_DT11:DA10_B 11 -6.117 -0.164 -0.009 -0.093 -9.005 1 19 A 12 B 9 -1.703 A_DG12:DC9_B 12 1.542 -0.077 -0.163 -0.018 -10.090 1 19 A 13 B 8 0.459 A_DG13:DC8_B 13 6.335 -0.547 -0.236 -0.155 5.038 1 19 A 14 B 7 -4.228 A_DC14:DG7_B 14 -10.165 0.248 0.429 -0.253 0.031 1 19 A 15 B 6 -4.672 A_DC15:DG6_B 15 -13.380 0.146 0.050 -0.113 -3.487 1 20 A 16 B 5 -0.120 A_DT16:DA5_B 16 -14.976 0.272 0.041 -0.142 20.099 1 19 A 17 B 4 -0.943 A_DG17:DC4_B 17 -1.537 -0.075 1.331 -0.217 7.722 1 20 A 18 B 3 -10.635 A_DA18:DT3_B 18 -16.595 -0.071 0.385 -0.124 10.045 1 19 A 19 B 2 -3.310 A_DG19:DC2_B 19 -8.926 0.091 0.854 -0.147 9.719 1 19 A 20 B 1 4.866 A_DG20:DC1_B 20 -17.325 -0.197 -0.029 -0.015 2.869 38.312 A A 1 2 -3.626 B B 20 19 2.937 -2.369 0.309 1.257 AA_DT1DC2:DG19DA20_BB 1 6.149 -9.413 37.762 2.181 0.217 3.609 39.383 A A 2 3 11.401 B B 19 18 3.844 7.515 -0.071 -0.021 AA_DC2DC3:DG18DG19_BB 2 -12.480 18.935 36.689 -1.085 -1.644 2.159 37.405 A A 3 4 -9.431 B B 18 17 2.606 -5.949 -1.052 0.227 AA_DC3DT4:DA17DG18_BB 3 10.418 -16.517 35.494 0.940 2.667 2.703 35.702 A A 4 5 12.385 B B 17 16 3.226 7.444 1.069 -0.211 AA_DT4DG5:DC16DA17_BB 4 -9.963 16.576 33.533 -1.353 -3.094 3.662 32.898 A A 5 6 -1.770 B B 16 15 3.709 -0.996 -0.033 -0.581 AA_DG5DT6:DA15DC16_BB 5 -6.433 11.431 32.265 -0.831 -1.193 2.924 40.062 A A 6 7 -7.202 B B 15 14 3.083 -4.893 -0.486 -0.077 AA_DT6DC7:DG14DA15_BB 6 7.854 -11.561 39.021 0.409 1.546 3.473 38.458 A A 7 8 2.724 B B 14 13 3.467 1.785 -0.381 -0.115 AA_DC7DC8:DG13DG14_BB 7 -6.765 10.323 37.840 -0.412 -0.322 2.932 34.079 A A 8 9 3.387 B B 13 12 3.055 1.979 0.473 -0.685 AA_DC8DC9:DG12DG13_BB 8 -4.254 7.281 33.763 -1.458 -1.429 3.025 35.374 A A 9 10 5.271 B B 12 11 3.126 3.192 0.256 -0.459 AA_DC9DC10:DG11DG12_BB 9 -4.115 6.795 35.001 -1.201 -0.994 3.705 34.926 A A 10 11 -14.851 B B 11 10 3.606 -8.742 0.436 -0.848 AA_DC10DT11:DA10DG11_BB 10 8.234 -13.987 32.857 0.114 0.712 3.553 34.628 A A 11 12 7.177 B B 10 9 3.625 4.258 -0.844 -0.809 AA_DT11DG12:DC9DA10_BB 11 -2.541 4.283 34.282 -2.082 0.986 3.450 35.322 A A 12 13 6.067 B B 9 8 3.491 3.675 -0.173 -0.232 AA_DG12DG13:DC8DC9_BB 12 -0.050 0.083 35.136 -0.960 0.277 3.112 36.794 A A 13 14 2.330 B B 8 7 3.045 1.467 -0.663 0.411 AA_DG13DC14:DG7DC8_BB 13 -4.058 6.442 36.549 0.463 0.529 3.140 36.770 A A 14 15 3.559 B B 7 6 3.174 2.240 0.387 -0.872 AA_DC14DC15:DG6DG7_BB 14 3.969 -6.306 36.497 -1.677 -0.090 3.263 30.698 A A 15 16 6.881 B B 6 5 3.304 3.631 0.250 -0.248 AA_DC15DT16:DA5DG6_BB 15 2.314 -4.385 30.401 -1.188 -0.014 2.840 37.829 A A 16 17 -8.940 B B 5 4 3.036 -5.709 -0.034 0.470 AA_DT16DG17:DC4DA5_BB 16 -10.063 15.756 36.078 1.401 -1.139 3.317 32.536 A A 17 18 5.413 B B 4 3 3.514 3.024 -1.298 -0.457 AA_DG17DA18:DT3DC4_BB 17 3.224 -5.772 32.242 -1.369 2.907 2.961 36.433 A A 18 19 -10.818 B B 3 2 2.998 -6.718 1.212 -0.736 AA_DA18DG19:DC2DT3_BB 18 -3.379 5.442 35.674 -0.319 -2.370 3.362 41.978 A A 19 20 3.882 B B 2 1 3.379 2.778 0.188 -0.242 AA_DG19DG20:DC1DC2_BB 19 2.251 -3.146 41.832 -0.636 -0.020 repository Initial release 1 0 2026-07-01 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35GM134744 United States Cancer Prevention and Research Institute of Texas (CPRIT) RR160029 XCheng5@mdanderson.org 0000-0002-6967-6362 Xiaodong Cheng principal investigator/group leader N RCSB Y RCSB 2026-04-19 REL REL EDO 1,2-ETHANEDIOL BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL UNX UNKNOWN LIGAND ZN ZINC ION HOH water 9606 Homo sapiens sample 1 20 9606 Homo sapiens sample 1 20 N N AlphaFold in silico model EDO 101 4 EDO EDO 101 A BTB 102 5 BTB BTB 102 A EDO 103 4 EDO EDO 103 A EDO 104 4 EDO EDO 104 A UNX 103 6 UNX UNX 101 B UNX 104 6 UNX UNX 102 B ZN 501 7 ZN ZN 501 F ZN 502 7 ZN ZN 502 F ZN 501 7 ZN ZN 501 C ZN 502 7 ZN ZN 502 C HOH 201 8 HOH HOH 201 A HOH 202 8 HOH HOH 202 A HOH 203 8 HOH HOH 203 A HOH 101 8 HOH HOH 201 B HOH 102 8 HOH HOH 202 B DT 1 n 1 DT 1 A DC 2 n 2 DC 2 A DC 3 n 3 DC 3 A DT 4 n 4 DT 4 A DG 5 n 5 DG 5 A DT 6 n 6 DT 6 A DC 7 n 7 DC 7 A DC 8 n 8 DC 8 A DC 9 n 9 DC 9 A DC 10 n 10 DC 10 A DT 11 n 11 DT 11 A DG 12 n 12 DG 12 A DG 13 n 13 DG 13 A DC 14 n 14 DC 14 A DC 15 n 15 DC 15 A DT 16 n 16 DT 16 A DG 17 n 17 DG 17 A DA 18 n 18 DA 18 A DG 19 n 19 DG 19 A DG 20 n 20 DG 20 A DC 1 n 1 DC 1 B DC 2 n 2 DC 2 B DT 3 n 3 DT 3 B DC 4 n 4 DC 4 B DA 5 n 5 DA 5 B DG 6 n 6 DG 6 B DG 7 n 7 DG 7 B DC 8 n 8 DC 8 B DC 9 n 9 DC 9 B DA 10 n 10 DA 10 B DG 11 n 11 DG 11 B DG 12 n 12 DG 12 B DG 13 n 13 DG 13 B DG 14 n 14 DG 14 B DA 15 n 15 DA 15 B DC 16 n 16 DC 16 B DA 17 n 17 DA 17 B DG 18 n 18 DG 18 B DG 19 n 19 DG 19 B DA 20 n 20 DA 20 B n 1 418 F n 2 419 F n 3 420 F n 4 421 F n 5 422 F n 6 423 F n 7 424 F n 8 425 F n 9 426 F LYS 427 n 10 LYS 427 F SER 428 n 11 SER 428 F CYS 429 n 12 CYS 429 F GLU 430 n 13 GLU 430 F PHE 431 n 14 PHE 431 F CYS 432 n 15 CYS 432 F GLY 433 n 16 GLY 433 F LYS 434 n 17 LYS 434 F THR 435 n 18 THR 435 F PHE 436 n 19 PHE 436 F LYS 437 n 20 LYS 437 F PHE 438 n 21 PHE 438 F GLN 439 n 22 GLN 439 F SER 440 n 23 SER 440 F ASN 441 n 24 ASN 441 F LEU 442 n 25 LEU 442 F ILE 443 n 26 ILE 443 F VAL 444 n 27 VAL 444 F HIS 445 n 28 HIS 445 F ARG 446 n 29 ARG 446 F ARG 447 n 30 ARG 447 F SER 448 n 31 SER 448 F HIS 449 n 32 HIS 449 F THR 450 n 33 THR 450 F GLY 451 n 34 GLY 451 F GLU 452 n 35 GLU 452 F LYS 453 n 36 LYS 453 F PRO 454 n 37 PRO 454 F TYR 455 n 38 TYR 455 F LYS 456 n 39 LYS 456 F CYS 457 n 40 CYS 457 F GLN 458 n 41 GLN 458 F LEU 459 n 42 LEU 459 F CYS 460 n 43 CYS 460 F ASP 461 n 44 ASP 461 F HIS 462 n 45 HIS 462 F ALA 463 n 46 ALA 463 F CYS 464 n 47 CYS 464 F SER 465 n 48 SER 465 F GLN 466 n 49 GLN 466 F ALA 467 n 50 ALA 467 F SER 468 n 51 SER 468 F LYS 469 n 52 LYS 469 F LEU 470 n 53 LEU 470 F LYS 471 n 54 LYS 471 F ARG 472 n 55 ARG 472 F HIS 473 n 56 HIS 473 F MET 474 n 57 MET 474 F LYS 475 n 58 LYS 475 F THR 476 n 59 THR 476 F HIS 477 n 60 HIS 477 F MET 478 n 61 MET 478 F HIS 479 n 62 HIS 479 F LYS 480 n 63 LYS 480 F ALA 481 n 64 ALA 481 F GLY 482 n 65 GLY 482 F n 66 483 F n 1 418 C n 2 419 C n 3 420 C n 4 421 C n 5 422 C n 6 423 C n 7 424 C n 8 425 C n 9 426 C LYS 427 n 10 LYS 427 C SER 428 n 11 SER 428 C CYS 429 n 12 CYS 429 C GLU 430 n 13 GLU 430 C PHE 431 n 14 PHE 431 C CYS 432 n 15 CYS 432 C GLY 433 n 16 GLY 433 C LYS 434 n 17 LYS 434 C THR 435 n 18 THR 435 C PHE 436 n 19 PHE 436 C LYS 437 n 20 LYS 437 C PHE 438 n 21 PHE 438 C GLN 439 n 22 GLN 439 C SER 440 n 23 SER 440 C ASN 441 n 24 ASN 441 C LEU 442 n 25 LEU 442 C ILE 443 n 26 ILE 443 C VAL 444 n 27 VAL 444 C HIS 445 n 28 HIS 445 C ARG 446 n 29 ARG 446 C ARG 447 n 30 ARG 447 C SER 448 n 31 SER 448 C HIS 449 n 32 HIS 449 C THR 450 n 33 THR 450 C GLY 451 n 34 GLY 451 C GLU 452 n 35 GLU 452 C LYS 453 n 36 LYS 453 C PRO 454 n 37 PRO 454 C TYR 455 n 38 TYR 455 C LYS 456 n 39 LYS 456 C CYS 457 n 40 CYS 457 C GLN 458 n 41 GLN 458 C LEU 459 n 42 LEU 459 C CYS 460 n 43 CYS 460 C ASP 461 n 44 ASP 461 C HIS 462 n 45 HIS 462 C ALA 463 n 46 ALA 463 C CYS 464 n 47 CYS 464 C SER 465 n 48 SER 465 C GLN 466 n 49 GLN 466 C ALA 467 n 50 ALA 467 C SER 468 n 51 SER 468 C LYS 469 n 52 LYS 469 C LEU 470 n 53 LEU 470 C LYS 471 n 54 LYS 471 C ARG 472 n 55 ARG 472 C HIS 473 n 56 HIS 473 C MET 474 n 57 MET 474 C LYS 475 n 58 LYS 475 C THR 476 n 59 THR 476 C HIS 477 n 60 HIS 477 C MET 478 n 61 MET 478 C HIS 479 n 62 HIS 479 C LYS 480 n 63 LYS 480 C n 64 481 C n 65 482 C n 66 483 C 3.2948 0.8102 3.1576 0.9147 2.4169 6.7923 0.6623 0.0286 1.6289 -0.1889 -0.5352 0.8805 -0.1908 -0.1556 -1.0317 1.8603 0.2809 -0.6842 0.7083 -0.1870 1.6183 refined -15.0428 -87.2696 12.8503 X-RAY DIFFRACTION 0.4007 0.5965 0.0009 2.3989 0.2867 0.0549 -0.6029 -0.1584 0.8836 -0.2019 0.3425 1.1786 1.9825 0.3224 0.0533 1.2801 0.2626 -0.1716 1.0754 -0.1872 1.1153 refined -21.2600 -70.3310 9.1494 X-RAY DIFFRACTION 0.0473 -0.1224 0.0458 0.3528 -0.2479 0.3094 0.9611 0.0227 0.6408 0.4132 -0.2032 2.5718 1.3581 -0.6756 0.0136 1.0703 -0.1012 -0.0941 0.8426 -0.0374 1.1414 refined -13.9407 -53.6920 13.1498 X-RAY DIFFRACTION 1.3146 -0.3577 0.2990 1.7316 2.0516 2.8469 -1.2333 0.2687 0.3592 0.3107 -1.3782 0.2092 -0.3405 -1.1518 -0.1490 1.2657 0.2779 0.0094 0.9395 -0.0171 1.2997 refined -19.7023 -37.3771 7.2970 X-RAY DIFFRACTION 0.4018 -0.2155 0.2556 0.2813 0.0179 0.3493 -0.0863 0.3211 -0.1450 0.4513 0.0713 -0.6323 -0.2856 0.1043 -0.0016 0.7669 -0.0190 -0.2482 0.9035 -0.0369 1.3633 refined -16.8478 -36.7865 14.1892 X-RAY DIFFRACTION 0.6270 -1.0537 -0.1571 3.4204 -0.2859 0.2246 1.1565 -0.1960 0.2542 -0.1017 -1.4182 -1.7947 -0.3324 -0.2363 -0.1627 1.4451 0.1362 -0.2950 0.7731 -0.1974 1.2124 refined -17.7834 -53.3978 6.2821 X-RAY DIFFRACTION 0.3069 0.0250 0.3713 0.2211 0.0943 0.4714 0.4909 0.8769 0.1539 -0.4717 -0.4123 2.0789 0.1550 -0.4712 -0.0034 0.6971 0.0155 -0.0468 0.6053 -0.0941 1.1526 refined -16.8592 -70.1708 15.5657 X-RAY DIFFRACTION 9.0669 -9.1161 2.7319 2.0003 -1.4170 2.7769 1.9536 2.0464 0.1628 -0.1065 -2.2998 -0.6200 2.0562 -0.2924 -0.2397 1.3692 -0.0599 -0.4510 1.0342 0.2170 1.3241 refined -19.7245 -86.1977 7.5015 X-RAY DIFFRACTION 1.7878 -0.2696 1.2381 0.0406 -0.1880 0.8498 0.9052 1.5548 -0.5383 -1.8673 -0.5062 -0.0093 0.8284 -0.3707 0.1872 0.9259 0.0384 -0.3305 0.9989 0.4614 1.0219 refined -0.9459 -40.2048 8.5913 X-RAY DIFFRACTION 0.1122 -0.0607 -0.0127 3.2362 1.9451 1.1911 0.5350 -0.3402 0.4556 0.2885 -0.3392 -0.8707 0.5121 -0.2937 1.2923 0.4774 -0.2249 0.2351 0.4352 0.1643 0.3995 refined -5.7283 -44.0939 17.2892 X-RAY DIFFRACTION 5.5857 -3.4960 4.1702 7.1821 -1.5589 3.3367 1.0295 -1.2733 -0.4311 0.5212 0.6675 1.4294 1.5945 -0.3821 1.7715 0.7390 0.1053 0.3039 0.8533 -0.0156 0.5182 refined -14.8057 -53.1011 27.3123 X-RAY DIFFRACTION 0.0981 0.2844 -0.2386 0.9676 -0.6182 0.5789 0.5447 0.5266 -0.3106 1.4771 -0.8472 -0.0169 -1.5640 -0.6236 0.0119 0.6952 -0.0558 -0.1751 0.7819 -0.1771 1.0102 refined -20.3249 -51.6007 21.2739 X-RAY DIFFRACTION 0.0938 -0.0750 0.1137 0.0595 -0.0905 0.2243 -1.9944 1.6473 0.1844 -0.3900 -0.9577 1.6795 0.3148 -0.0383 -0.0229 1.2740 -0.3886 0.1096 1.0823 -0.3386 1.1464 refined -31.3991 -57.9287 27.8522 X-RAY DIFFRACTION 4.2931 -1.1904 0.7303 1.6456 0.4512 0.4500 0.1483 -0.7342 -0.6938 0.2792 -0.4322 -0.4199 1.1075 -0.8489 -0.3763 1.1326 -0.5649 0.0833 0.5427 -0.0833 0.9043 refined -16.7918 -80.5204 27.6009 X-RAY DIFFRACTION 0.2961 -0.1362 -0.9447 0.8089 0.5800 2.9874 -0.3494 -0.3081 -0.1269 0.5648 0.6925 0.3741 0.8967 0.0952 0.9210 0.5148 0.1371 0.4149 0.4971 0.2079 0.0054 refined -9.1310 -76.4951 21.4086 X-RAY DIFFRACTION 1.2888 0.5149 0.3928 0.8211 -0.4918 0.7945 -0.4353 0.2149 -0.4291 0.0822 0.1128 0.0674 0.2600 0.3096 -0.2087 0.3286 0.0553 0.3962 0.6807 0.0013 0.0101 refined -1.9831 -68.1662 10.8983 X-RAY DIFFRACTION 4.7643 -0.4815 -0.4153 0.6931 0.2777 0.7134 0.4948 0.7616 0.9987 -0.4482 -0.1431 -0.5915 -0.1428 0.0288 -0.5269 0.4397 0.7004 0.1305 0.6301 -0.0300 0.4587 refined -6.8728 -66.8072 4.0961 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 CHAIN 'A' AND (RESID 1 THROUGH 5 ) X-RAY DIFFRACTION 2 CHAIN 'A' AND (RESID 6 THROUGH 10 ) X-RAY DIFFRACTION 3 CHAIN 'A' AND (RESID 11 THROUGH 15 ) X-RAY DIFFRACTION 4 CHAIN 'A' AND (RESID 16 THROUGH 20 ) X-RAY DIFFRACTION 5 CHAIN 'B' AND (RESID 1 THROUGH 5 ) X-RAY DIFFRACTION 6 CHAIN 'B' AND (RESID 6 THROUGH 10 ) X-RAY DIFFRACTION 7 CHAIN 'B' AND (RESID 11 THROUGH 15 ) X-RAY DIFFRACTION 8 CHAIN 'B' AND (RESID 16 THROUGH 20 ) X-RAY DIFFRACTION 9 CHAIN 'F' AND (RESID 427 THROUGH 438 ) X-RAY DIFFRACTION 10 CHAIN 'F' AND (RESID 439 THROUGH 455 ) X-RAY DIFFRACTION 11 CHAIN 'F' AND (RESID 456 THROUGH 465 ) X-RAY DIFFRACTION 12 CHAIN 'F' AND (RESID 466 THROUGH 477 ) X-RAY DIFFRACTION 13 CHAIN 'F' AND (RESID 478 THROUGH 482 ) X-RAY DIFFRACTION 14 CHAIN 'C' AND (RESID 427 THROUGH 438 ) X-RAY DIFFRACTION 15 CHAIN 'C' AND (RESID 439 THROUGH 455 ) X-RAY DIFFRACTION 16 CHAIN 'C' AND (RESID 456 THROUGH 466 ) X-RAY DIFFRACTION 17 CHAIN 'C' AND (RESID 467 THROUGH 480 ) author_and_software_defined_assembly PISA 4 tetrameric fluorescence resonance energy transfer F CYS 429 C SG CYS 12 1_555 F ZN 502 L ZN ZN 1_555 F CYS 432 C SG CYS 15 1_555 112.2 F CYS 429 C SG CYS 12 1_555 F ZN 502 L ZN ZN 1_555 F HIS 445 C NE2 HIS 28 1_555 99.0 F CYS 432 C SG CYS 15 1_555 F ZN 502 L ZN ZN 1_555 F HIS 445 C NE2 HIS 28 1_555 62.0 F CYS 429 C SG CYS 12 1_555 F ZN 502 L ZN ZN 1_555 F HIS 449 C NE2 HIS 32 1_555 144.3 F CYS 432 C SG CYS 15 1_555 F ZN 502 L ZN ZN 1_555 F HIS 449 C NE2 HIS 32 1_555 103.5 F HIS 445 C NE2 HIS 28 1_555 F ZN 502 L ZN ZN 1_555 F HIS 449 C NE2 HIS 32 1_555 99.5 F CYS 457 C SG CYS 40 1_555 F ZN 501 K ZN ZN 1_555 F CYS 460 C SG CYS 43 1_555 116.2 F CYS 457 C SG CYS 40 1_555 F ZN 501 K ZN ZN 1_555 F HIS 473 C NE2 HIS 56 1_555 87.1 F CYS 460 C SG CYS 43 1_555 F ZN 501 K ZN ZN 1_555 F HIS 473 C NE2 HIS 56 1_555 76.8 F CYS 457 C SG CYS 40 1_555 F ZN 501 K ZN ZN 1_555 F HIS 477 C NE2 HIS 60 1_555 120.5 F CYS 460 C SG CYS 43 1_555 F ZN 501 K ZN ZN 1_555 F HIS 477 C NE2 HIS 60 1_555 123.0 F HIS 473 C NE2 HIS 56 1_555 F ZN 501 K ZN ZN 1_555 F HIS 477 C NE2 HIS 60 1_555 100.1 C CYS 429 D SG CYS 12 1_555 C ZN 502 N ZN ZN 1_555 C CYS 432 D SG CYS 15 1_555 113.2 C CYS 429 D SG CYS 12 1_555 C ZN 502 N ZN ZN 1_555 C HIS 445 D NE2 HIS 28 1_555 105.5 C CYS 432 D SG CYS 15 1_555 C ZN 502 N ZN ZN 1_555 C HIS 445 D NE2 HIS 28 1_555 67.9 C CYS 429 D SG CYS 12 1_555 C ZN 502 N ZN ZN 1_555 C HIS 449 D NE2 HIS 32 1_555 127.6 C CYS 432 D SG CYS 15 1_555 C ZN 502 N ZN ZN 1_555 C HIS 449 D NE2 HIS 32 1_555 118.7 C HIS 445 D NE2 HIS 28 1_555 C ZN 502 N ZN ZN 1_555 C HIS 449 D NE2 HIS 32 1_555 100.2 C CYS 457 D SG CYS 40 1_555 C ZN 501 M ZN ZN 1_555 C CYS 460 D SG CYS 43 1_555 116.6 C CYS 457 D SG CYS 40 1_555 C ZN 501 M ZN ZN 1_555 C HIS 473 D NE2 HIS 56 1_555 92.8 C CYS 460 D SG CYS 43 1_555 C ZN 501 M ZN ZN 1_555 C HIS 473 D NE2 HIS 56 1_555 71.3 C CYS 457 D SG CYS 40 1_555 C ZN 501 M ZN ZN 1_555 C HIS 477 D NE2 HIS 60 1_555 118.7 C CYS 460 D SG CYS 43 1_555 C ZN 501 M ZN ZN 1_555 C HIS 477 D NE2 HIS 60 1_555 124.5 C HIS 473 D NE2 HIS 56 1_555 C ZN 501 M ZN ZN 1_555 C HIS 477 D NE2 HIS 60 1_555 100.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 F N TYR 455 C N TYR 38 F O CYS 464 C O CYS 47 C N TYR 455 D N TYR 38 C O CYS 464 D O CYS 47 1 F CG LYS 427 C CG LYS 10 1 Y 1 F CD LYS 427 C CD LYS 10 1 Y 1 F CE LYS 427 C CE LYS 10 1 Y 1 F NZ LYS 427 C NZ LYS 10 1 Y 1 F CG LYS 437 C CG LYS 20 1 Y 1 F CD LYS 437 C CD LYS 20 1 Y 1 F CE LYS 437 C CE LYS 20 1 Y 1 F NZ LYS 437 C NZ LYS 20 1 Y 1 F CG LEU 459 C CG LEU 42 1 Y 1 F CD1 LEU 459 C CD1 LEU 42 1 Y 1 F CD2 LEU 459 C CD2 LEU 42 1 Y 1 F CG LYS 475 C CG LYS 58 1 Y 1 F CD LYS 475 C CD LYS 58 1 Y 1 F CE LYS 475 C CE LYS 58 1 Y 1 F NZ LYS 475 C NZ LYS 58 1 Y 1 F CG LYS 480 C CG LYS 63 1 Y 1 F CD LYS 480 C CD LYS 63 1 Y 1 F CE LYS 480 C CE LYS 63 1 Y 1 F NZ LYS 480 C NZ LYS 63 1 Y 1 C CG LYS 427 D CG LYS 10 1 Y 1 C CD LYS 427 D CD LYS 10 1 Y 1 C CE LYS 427 D CE LYS 10 1 Y 1 C NZ LYS 427 D NZ LYS 10 1 Y 1 C CG LYS 437 D CG LYS 20 1 Y 1 C CD LYS 437 D CD LYS 20 1 Y 1 C CE LYS 437 D CE LYS 20 1 Y 1 C NZ LYS 437 D NZ LYS 20 1 Y 1 C CG LYS 471 D CG LYS 54 1 Y 1 C CD LYS 471 D CD LYS 54 1 Y 1 C CE LYS 471 D CE LYS 54 1 Y 1 C NZ LYS 471 D NZ LYS 54 1 Y 1 C CG LYS 475 D CG LYS 58 1 Y 1 C CD LYS 475 D CD LYS 58 1 Y 1 C CE LYS 475 D CE LYS 58 1 Y 1 C NZ LYS 475 D NZ LYS 58 1 Y 1 C CG HIS 479 D CG HIS 62 1 Y 1 C ND1 HIS 479 D ND1 HIS 62 1 Y 1 C CD2 HIS 479 D CD2 HIS 62 1 Y 1 C CE1 HIS 479 D CE1 HIS 62 1 Y 1 C NE2 HIS 479 D NE2 HIS 62 1 Y 1 C CG LYS 480 D CG LYS 63 1 Y 1 C CD LYS 480 D CD LYS 63 1 Y 1 C CE LYS 480 D CE LYS 63 1 Y 1 C NZ LYS 480 D NZ LYS 63 1 Y 1 F GLY 418 C GLY 1 1 Y 1 F PRO 419 C PRO 2 1 Y 1 F LEU 420 C LEU 3 1 Y 1 F GLY 421 C GLY 4 1 Y 1 F SER 422 C SER 5 1 Y 1 F PRO 423 C PRO 6 1 Y 1 F ALA 424 C ALA 7 1 Y 1 F LYS 425 C LYS 8 1 Y 1 F SER 426 C SER 9 1 Y 1 F SER 483 C SER 66 1 Y 1 C GLY 418 D GLY 1 1 Y 1 C PRO 419 D PRO 2 1 Y 1 C LEU 420 D LEU 3 1 Y 1 C GLY 421 D GLY 4 1 Y 1 C SER 422 D SER 5 1 Y 1 C PRO 423 D PRO 6 1 Y 1 C ALA 424 D ALA 7 1 Y 1 C LYS 425 D LYS 8 1 Y 1 C SER 426 D SER 9 1 Y 1 C ALA 481 D ALA 64 1 Y 1 C GLY 482 D GLY 65 1 Y 1 C SER 483 D SER 66 1 Y 89.84 0.2954 0.2677 0.2692 3.29 35.30 591 10466 11057 5.350 98.03 0.5223 1 FREE R-VALUE 1.330 MOLECULAR REPLACEMENT 34.9362 0.9000 1.1000 GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 3.29 35.30 5 1704 32 820 847 0.0030 1822 0.4894 2598 26.1043 741 0.0281 280 0.0013 189 0.3923 0.3399 3.62 143 2476 92.68 0.3195 0.2964 4.14 141 2657 99.68 0.3042 0.2885 5.22 156 2654 99.82 0.2461 0.2190 35.30 151 2679 99.96 79.83 3.14 35.3 12UQ 13376 0.988 1 2.9 6.9 100 3.14 3.20 636 0.768 1 100 refinement PHENIX 2.0_5885 data reduction autoPROC data scaling autoPROC phasing PHENIX 5 monoclinic C 1 2 1 C 2y x,y,z -x,y,-z x+1/2,y+1/2,z -x+1/2,y+1/2,-z N BCL11B ZF2-3 in Complex with a DNA Sequence Containing Two Binding Sites (Motifs TGTCCC and TGGCCT) 1 N N 2 N N 3 N N 3 N N 4 N N 5 N N 4 N N 4 N N 6 N N 6 N N 7 N N 7 N N 7 N N 7 N N 8 N N 8 N N F PHE 438 C PHE 21 HELX_P F GLY 451 C GLY 34 1 AA1 14 F GLN 466 C GLN 49 HELX_P F LYS 475 C LYS 58 1 AA2 10 F THR 476 C THR 59 HELX_P F MET 478 C MET 61 5 AA3 3 C PHE 438 D PHE 21 HELX_P C GLY 451 D GLY 34 1 AA4 14 C GLN 466 D GLN 49 HELX_P C LYS 475 D LYS 58 1 AA5 10 metalc 2.308 F CYS 429 C SG CYS 12 1_555 F ZN 502 L ZN ZN 1_555 metalc 2.303 F CYS 432 C SG CYS 15 1_555 F ZN 502 L ZN ZN 1_555 metalc 2.035 F HIS 445 C NE2 HIS 28 1_555 F ZN 502 L ZN ZN 1_555 metalc 2.060 F HIS 449 C NE2 HIS 32 1_555 F ZN 502 L ZN ZN 1_555 metalc 2.302 F CYS 457 C SG CYS 40 1_555 F ZN 501 K ZN ZN 1_555 metalc 2.303 F CYS 460 C SG CYS 43 1_555 F ZN 501 K ZN ZN 1_555 metalc 2.037 F HIS 473 C NE2 HIS 56 1_555 F ZN 501 K ZN ZN 1_555 metalc 2.026 F HIS 477 C NE2 HIS 60 1_555 F ZN 501 K ZN ZN 1_555 metalc 2.306 C CYS 429 D SG CYS 12 1_555 C ZN 502 N ZN ZN 1_555 metalc 2.305 C CYS 432 D SG CYS 15 1_555 C ZN 502 N ZN ZN 1_555 metalc 2.035 C HIS 445 D NE2 HIS 28 1_555 C ZN 502 N ZN ZN 1_555 metalc 2.046 C HIS 449 D NE2 HIS 32 1_555 C ZN 502 N ZN ZN 1_555 metalc 2.301 C CYS 457 D SG CYS 40 1_555 C ZN 501 M ZN ZN 1_555 metalc 2.302 C CYS 460 D SG CYS 43 1_555 C ZN 501 M ZN ZN 1_555 metalc 2.037 C HIS 473 D NE2 HIS 56 1_555 C ZN 501 M ZN ZN 1_555 metalc 2.022 C HIS 477 D NE2 HIS 60 1_555 C ZN 501 M ZN ZN 1_555 hydrog WATSON-CRICK A DT 1 A N3 DT 1 1_555 B DA 20 B N1 DA 20 1_555 hydrog WATSON-CRICK A DT 1 A O4 DT 1 1_555 B DA 20 B N6 DA 20 1_555 hydrog WATSON-CRICK A DC 2 A N3 DC 2 1_555 B DG 19 B N1 DG 19 1_555 hydrog WATSON-CRICK A DC 2 A N4 DC 2 1_555 B DG 19 B O6 DG 19 1_555 hydrog WATSON-CRICK A DC 2 A O2 DC 2 1_555 B DG 19 B N2 DG 19 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 18 B N1 DG 18 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 18 B O6 DG 18 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 18 B N2 DG 18 1_555 hydrog WATSON-CRICK A DT 4 A N3 DT 4 1_555 B DA 17 B N1 DA 17 1_555 hydrog WATSON-CRICK A DT 4 A O4 DT 4 1_555 B DA 17 B N6 DA 17 1_555 hydrog WATSON-CRICK A DG 5 A N1 DG 5 1_555 B DC 16 B N3 DC 16 1_555 hydrog WATSON-CRICK A DG 5 A N2 DG 5 1_555 B DC 16 B O2 DC 16 1_555 hydrog WATSON-CRICK A DG 5 A O6 DG 5 1_555 B DC 16 B N4 DC 16 1_555 hydrog WATSON-CRICK A DT 6 A N3 DT 6 1_555 B DA 15 B N1 DA 15 1_555 hydrog WATSON-CRICK A DT 6 A O4 DT 6 1_555 B DA 15 B N6 DA 15 1_555 hydrog WATSON-CRICK A DC 7 A N3 DC 7 1_555 B DG 14 B N1 DG 14 1_555 hydrog WATSON-CRICK A DC 7 A N4 DC 7 1_555 B DG 14 B O6 DG 14 1_555 hydrog WATSON-CRICK A DC 7 A O2 DC 7 1_555 B DG 14 B N2 DG 14 1_555 hydrog WATSON-CRICK A DC 8 A N3 DC 8 1_555 B DG 13 B N1 DG 13 1_555 hydrog WATSON-CRICK A DC 8 A N4 DC 8 1_555 B DG 13 B O6 DG 13 1_555 hydrog WATSON-CRICK A DC 8 A O2 DC 8 1_555 B DG 13 B N2 DG 13 1_555 hydrog WATSON-CRICK A DC 9 A N3 DC 9 1_555 B DG 12 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 9 A N4 DC 9 1_555 B DG 12 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 9 A O2 DC 9 1_555 B DG 12 B N2 DG 12 1_555 hydrog WATSON-CRICK A DC 10 A N3 DC 10 1_555 B DG 11 B N1 DG 11 1_555 hydrog WATSON-CRICK A DC 10 A N4 DC 10 1_555 B DG 11 B O6 DG 11 1_555 hydrog WATSON-CRICK A DC 10 A O2 DC 10 1_555 B DG 11 B N2 DG 11 1_555 hydrog WATSON-CRICK A DT 11 A N3 DT 11 1_555 B DA 10 B N1 DA 10 1_555 hydrog WATSON-CRICK A DT 11 A O4 DT 11 1_555 B DA 10 B N6 DA 10 1_555 hydrog WATSON-CRICK A DG 12 A N1 DG 12 1_555 B DC 9 B N3 DC 9 1_555 hydrog WATSON-CRICK A DG 12 A N2 DG 12 1_555 B DC 9 B O2 DC 9 1_555 hydrog WATSON-CRICK A DG 12 A O6 DG 12 1_555 B DC 9 B N4 DC 9 1_555 hydrog WATSON-CRICK A DG 13 A N1 DG 13 1_555 B DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK A DG 13 A N2 DG 13 1_555 B DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK A DG 13 A O6 DG 13 1_555 B DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK A DC 14 A N3 DC 14 1_555 B DG 7 B N1 DG 7 1_555 hydrog WATSON-CRICK A DC 14 A N4 DC 14 1_555 B DG 7 B O6 DG 7 1_555 hydrog WATSON-CRICK A DC 14 A O2 DC 14 1_555 B DG 7 B N2 DG 7 1_555 hydrog WATSON-CRICK A DC 15 A N3 DC 15 1_555 B DG 6 B N1 DG 6 1_555 hydrog WATSON-CRICK A DC 15 A N4 DC 15 1_555 B DG 6 B O6 DG 6 1_555 hydrog WATSON-CRICK A DC 15 A O2 DC 15 1_555 B DG 6 B N2 DG 6 1_555 hydrog WATSON-CRICK A DT 16 A N3 DT 16 1_555 B DA 5 B N1 DA 5 1_555 hydrog WATSON-CRICK A DT 16 A O4 DT 16 1_555 B DA 5 B N6 DA 5 1_555 hydrog WATSON-CRICK A DG 17 A N1 DG 17 1_555 B DC 4 B N3 DC 4 1_555 hydrog WATSON-CRICK A DG 17 A N2 DG 17 1_555 B DC 4 B O2 DC 4 1_555 hydrog WATSON-CRICK A DG 17 A O6 DG 17 1_555 B DC 4 B N4 DC 4 1_555 hydrog WATSON-CRICK A DA 18 A N1 DA 18 1_555 B DT 3 B N3 DT 3 1_555 hydrog WATSON-CRICK A DA 18 A N6 DA 18 1_555 B DT 3 B O4 DT 3 1_555 hydrog WATSON-CRICK A DG 19 A N1 DG 19 1_555 B DC 2 B N3 DC 2 1_555 hydrog WATSON-CRICK A DG 19 A N2 DG 19 1_555 B DC 2 B O2 DC 2 1_555 hydrog WATSON-CRICK A DG 19 A O6 DG 19 1_555 B DC 2 B N4 DC 2 1_555 hydrog WATSON-CRICK A DG 20 A N1 DG 20 1_555 B DC 1 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 20 A N2 DG 20 1_555 B DC 1 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 20 A O6 DG 20 1_555 B DC 1 B N4 DC 1 1_555 DNA BINDING PROTEIN/DNA TRANSCRIPTION FACTOR, DNA BINDING, TRANSCRIPTION, TRANSCRIPTION-DNA COMPLEX, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex 12UQ PDB 1 1 12UQ 12UQ PDB 2 1 12UQ BC11B_HUMAN UNP 3 423 Q9C0K0 PAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGS 1 20 12UQ 1 20 12UQ A 1 1 20 1 20 12UQ 1 20 12UQ B 2 1 20 423 483 12UQ 423 483 Q9C0K0 F 3 6 66 423 483 12UQ 423 483 Q9C0K0 C 3 6 66 3 expression tag GLY 418 12UQ F Q9C0K0 UNP 1 3 expression tag PRO 419 12UQ F Q9C0K0 UNP 2 3 expression tag LEU 420 12UQ F Q9C0K0 UNP 3 3 expression tag GLY 421 12UQ F Q9C0K0 UNP 4 3 expression tag SER 422 12UQ F Q9C0K0 UNP 5 4 expression tag GLY 418 12UQ C Q9C0K0 UNP 1 4 expression tag PRO 419 12UQ C Q9C0K0 UNP 2 4 expression tag LEU 420 12UQ C Q9C0K0 UNP 3 4 expression tag GLY 421 12UQ C Q9C0K0 UNP 4 4 expression tag SER 422 12UQ C Q9C0K0 UNP 5 2 2 anti-parallel anti-parallel F TYR 455 C TYR 38 F LYS 456 C LYS 39 F ALA 463 C ALA 46 F CYS 464 C CYS 47 C TYR 455 D TYR 38 C LYS 456 D LYS 39 C ALA 463 D ALA 46 C CYS 464 D CYS 47 5 C 1 2 1