0.028436 0.004863 0.005133 0.000000 0.026214 0.004059 0.000000 0.000000 0.017099 0.00000 0.00000 0.00000 25.79822 9.11301 1.35700 25.34896 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.01032 2.96436 19.97189 1.75589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 7.96527 9.05267 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.51135 5.44231 1.42069 35.72801 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.55732 6.39887 1.23737 29.19336 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 27.87530 3.31736 0.0 1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. Horton, J.R. Cheng, X. Zhou, J. Lee, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 97.109 98.654 99.705 35.167 38.701 59.860 78454.084 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Br -1 79.904 BROMIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N BR N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N O N 90 N P N 91 N O N 92 N O N 93 N O N 94 N C N 95 R C N 96 N O N 97 S C N 98 N O N 99 N C N 100 R C Y 101 N N Y 102 N C Y 103 N N Y 104 N C Y 105 N C N 106 N N Y 107 N N Y 108 N C Y 109 N N Y 110 N C N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N O N 126 N P N 127 N O N 128 N O N 129 N O N 130 N C N 131 R C N 132 N O N 133 S C N 134 N O N 135 N C N 136 R C N 137 N N N 138 N C N 139 N O N 140 N N N 141 N C N 142 N N N 143 N C N 144 N C N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N P N 161 N O N 162 N O N 163 N O N 164 N C N 165 R C N 166 N O N 167 S C N 168 N O N 169 N C N 170 R C Y 171 N N Y 172 N C Y 173 N N Y 174 N C N 175 N C N 176 N O N 177 N N N 178 N C N 179 N N N 180 N N Y 181 N C N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N O N 197 N P N 198 N O N 199 N O N 200 N O N 201 N C N 202 R C N 203 N O N 204 S C N 205 N O N 206 N C N 207 R C N 208 N N N 209 N C N 210 N O N 211 N N N 212 N C N 213 N O N 214 N C N 215 N C N 216 N C N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N O N 240 N N N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N O N 260 N O N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 N C N 273 N C N 274 N O N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C Y 286 N C Y 287 N N Y 288 N C Y 289 N C Y 290 N N N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N O N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 S C N 310 N C N 311 N C N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C N 332 N C N 333 N C N 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N C N 356 N C N 357 N N N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C N 379 N C N 380 N S N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N N N 418 S C N 419 N C N 420 N O N 421 N C N 422 N C N 423 N C N 424 N O N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N N N 435 S C N 436 N C N 437 N O N 438 N C N 439 N O N 440 N O N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C N 451 N O N 452 R C N 453 N O N 454 N C N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N N N 466 S C N 467 N C N 468 N O N 469 N C Y 470 N C Y 471 N C Y 472 N C Y 473 N C Y 474 N C Y 475 N C N 476 N O N 477 N O N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N N N 490 S C N 491 N C N 492 N O N 493 N C N 494 N C N 495 N C N 496 N O N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub N 471 N sing Y 472 N doub N 473 N sing Y 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N doub N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing US Biorxiv 2692-8205 10.64898/2026.05.01.721897 42232506 Bipartite DNA binding domain of transcription factor BCL11B binds clustered short DNA sequence motifs. 2026 0009-0004-2163-3015 0000-0003-4104-7158 0000-0001-9749-8068 0000-0002-0298-2832 0000-0002-9533-4761 0000-0001-5950-9168 0000-0002-0873-0724 0000-0002-6160-7688 0000-0002-6967-6362 10.2210/pdb12up/pdb pdb_000012up 100 1 N PIXEL 2025-08-04 DECTRIS EIGER X 9M SINGLE WAVELENGTH M x-ray 1 0.919716 1.0 17-ID APS 0.919716 SYNCHROTRON APS BEAMLINE 17-ID 7390.648 B-cell lymphoma/leukemia 11B domains ZF2-3 2 man polymer 3951.586 Strand Top 2 syn polymer 3991.610 Strand Bottom 2 syn polymer 65.409 ZINC ION 4 nat non-polymer 79.904 BROMIDE ION 4 syn non-polymer 18.015 water 15 nat water BCL-11B,B-cell CLL/lymphoma 11B,COUP-TF-interacting protein 2,Radiation-induced tumor suppressor gene 1 protein,hRit1 no no GPLGSPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGS GPLGSPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGS A,F polypeptide(L) no no (DG)(DA)(DA)(DT)(DG)(DG)(DC)(DC)(DA)(DT)(DC)(DT)(DC) GAATGGCCATCTC D,G polydeoxyribonucleotide no no (DA)(DG)(DA)(DT)(DG)(DG)(DC)(DC)(DA)(DT)(DT)(DC)(DG) AGATGGCCATTCG E,H polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 1 66 BCL11B, CTIP2, RIT1 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) Gold Plus Biological sequence 1 2.56 51.92 VAPOR DIFFUSION, SITTING DROP 30% w/v Polyethylene glycol monomethyl ether 2,000, 0.15 M Potassium bromide 292 -6.490 1 19 D 1 E 12 -0.814 D_DG1:DC12_E 1 3.082 -0.178 -0.499 -0.157 1.778 1 20 D 2 E 11 -2.414 D_DA2:DT11_E 2 -5.435 0.119 -0.101 -0.082 -3.454 1 20 D 3 E 10 8.360 D_DA3:DT10_E 3 -11.637 -0.155 0.100 0.035 -4.479 1 20 D 4 E 9 -2.579 D_DT4:DA9_E 4 -9.544 -0.117 0.107 -0.061 -7.270 1 19 D 5 E 8 0.859 D_DG5:DC8_E 5 -2.827 -0.208 -0.482 -0.156 -6.341 1 19 D 6 E 7 -0.713 D_DG6:DC7_E 6 -1.839 -0.180 -0.635 -0.169 -2.748 1 19 D 7 E 6 -1.768 D_DC7:DG6_E 7 -1.769 0.177 -0.075 -0.122 0.334 1 19 D 8 E 5 0.022 D_DC8:DG5_E 8 -3.347 0.199 0.420 -0.167 4.526 1 20 D 9 E 4 -0.601 D_DA9:DT4_E 9 -5.142 0.094 0.560 -0.162 0.862 1 20 D 10 E 3 2.329 D_DT10:DA3_E 10 -7.676 -0.104 0.268 -0.171 0.370 1 19 D 11 E 2 0.080 D_DC11:DG2_E 11 -5.619 0.205 -0.031 -0.115 -0.071 1 20 D 12 E 1 -3.223 D_DT12:DA1_E 12 -5.229 -0.074 0.154 -0.146 4.919 1 19 H 2 G 11 -0.922 H_DG2:DC11_G 13 -8.526 -0.183 0.060 -0.141 0.029 1 20 H 3 G 10 2.171 H_DA3:DT10_G 14 -8.347 0.055 0.422 -0.189 -2.207 1 20 H 4 G 9 1.003 H_DT4:DA9_G 15 -5.133 -0.053 0.608 -0.184 -1.565 1 19 H 5 G 8 1.160 H_DG5:DC8_G 16 0.878 -0.232 0.255 -0.154 4.194 1 19 H 6 G 7 -0.243 H_DG6:DC7_G 17 0.506 -0.186 -0.078 -0.125 7.208 1 19 H 7 G 6 0.768 H_DC7:DG6_G 18 -2.555 0.197 -0.553 -0.167 7.067 1 19 H 8 G 5 1.562 H_DC8:DG5_G 19 -3.672 0.224 -0.261 -0.146 2.811 1 20 H 9 G 4 -1.693 H_DA9:DT4_G 20 -9.388 0.098 -0.056 -0.118 2.615 1 20 H 10 G 3 3.309 H_DT10:DA3_G 21 -8.525 -0.071 -0.174 -0.156 0.991 1 20 H 11 G 2 -2.763 H_DT11:DA2_G 22 -4.932 -0.129 -0.387 -0.064 9.471 1 19 H 12 G 1 -0.013 H_DC12:DG1_G 23 -0.289 0.183 -0.708 -0.188 3.442 40.810 D D 1 2 11.167 E E 12 11 3.318 7.722 -0.391 0.863 DD_DG1DA2:DT11DC12_EE 1 -5.387 7.790 39.754 0.346 -0.061 3.214 39.373 D D 2 3 0.992 E E 11 10 3.225 0.668 -0.015 -0.211 DD_DA2DA3:DT10DT11_EE 2 -2.797 4.155 39.272 -0.392 -0.304 3.159 34.023 D D 3 4 0.794 E E 10 9 3.152 0.464 -0.646 -0.783 DD_DA3DT4:DA9DT10_EE 3 -1.044 1.784 34.005 -1.410 0.944 3.542 34.995 D D 4 5 1.680 E E 9 8 3.496 1.009 0.614 0.307 DD_DT4DG5:DC8DA9_EE 4 2.990 -4.979 34.857 0.347 -0.535 3.456 31.123 D D 5 6 2.298 E E 8 7 3.394 1.231 -0.913 -0.072 DD_DG5DG6:DC7DC8_EE 5 -2.829 5.281 30.974 -0.380 1.135 3.267 38.963 D D 6 7 2.609 E E 7 6 3.212 1.736 -0.658 0.114 DD_DG6DC7:DG6DC7_EE 6 -4.493 6.752 38.676 -0.038 0.446 3.203 31.515 D D 7 8 4.090 E E 6 5 3.292 2.217 0.662 -0.213 DD_DC7DC8:DG5DG6_EE 7 -2.698 4.977 31.326 -0.803 -1.718 3.041 40.023 D D 8 9 -0.933 E E 5 4 3.055 -0.638 0.255 -0.084 DD_DC8DA9:DT4DG5_EE 8 -1.979 2.892 39.971 -0.055 -0.583 3.434 32.834 D D 9 10 -3.149 E E 4 3 3.364 -1.779 -0.067 -1.416 DD_DA9DT10:DA3DT4_EE 9 0.024 -0.042 32.787 -2.188 0.122 3.081 35.267 D D 10 11 2.571 E E 3 2 3.114 1.557 -0.756 -0.782 DD_DT10DC11:DG2DA3_EE 10 -0.160 0.264 35.233 -1.509 1.226 3.294 33.004 D D 11 12 0.776 E E 2 1 3.297 0.441 -0.099 -0.215 DD_DC11DT12:DA1DG2_EE 11 0.219 -0.386 33.000 -0.453 0.211 2.856 96.747 D H 12 2 7.740 E G 1 11 3.172 11.551 -0.120 -3.273 DH_DT12DG2:DC11DA1_GE 12 5.790 -3.879 96.095 -2.371 0.171 3.097 37.473 H H 2 3 1.904 G G 11 10 3.158 1.223 0.670 -0.857 HH_DG2DA3:DT10DC11_GG 13 -1.708 2.660 37.416 -1.487 -1.257 3.291 32.182 H H 3 4 -1.036 G G 10 9 3.269 -0.574 0.000 -1.313 HH_DA3DT4:DA9DT10_GG 14 -0.230 0.415 32.176 -2.267 -0.041 3.098 42.015 H H 4 5 -3.021 G G 9 8 3.130 -2.161 -0.056 0.110 HH_DT4DG5:DC8DA9_GG 15 4.586 -6.410 41.722 0.367 0.532 3.076 30.403 H H 5 6 5.611 G G 8 7 3.192 2.934 -0.647 -0.292 HH_DG5DG6:DC7DC8_GG 16 2.890 -5.527 30.129 -1.123 1.792 3.244 39.374 H H 6 7 3.440 G G 7 6 3.196 2.311 0.665 -0.036 HH_DG6DC7:DG6DC7_GG 17 4.751 -7.071 39.032 -0.324 -0.430 3.443 31.361 H H 7 8 3.150 G G 6 5 3.397 1.700 0.805 -0.140 HH_DC7DC8:DG5DG6_GG 18 2.861 -5.302 31.188 -0.595 -0.925 3.588 35.373 H H 8 9 1.007 G G 5 4 3.549 0.612 -0.650 0.287 HH_DC8DA9:DT4DG5_GG 19 -2.373 3.908 35.291 0.374 0.688 3.146 33.780 H H 9 10 0.072 G G 4 3 3.139 0.042 0.259 -0.842 HH_DA9DT10:DA3DT4_GG 20 1.517 -2.611 33.747 -1.455 -0.209 3.148 39.600 H H 10 11 2.305 G G 3 2 3.143 1.559 0.281 -0.140 HH_DT10DT11:DA2DA3_GG 21 3.399 -5.024 39.430 -0.383 -0.031 3.412 41.574 H H 11 12 9.940 G G 2 1 3.283 7.003 0.450 0.877 HH_DT11DC12:DG1DA2_GG 22 5.845 -8.297 40.604 0.466 0.008 repository Initial release 1 0 2026-07-01 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35GM134744 United States Cancer Prevention and Research Institute of Texas (CPRIT) RR160029 XCheng5@mdanderson.org 0000-0002-6967-6362 Xiaodong Cheng principal investigator/group leader N RCSB Y RCSB 2026-04-19 REL REL ZN ZINC ION BR BROMIDE ION HOH water 9606 Homo sapiens sample 1 13 9606 Homo sapiens sample 1 13 N N AlphaFold in silico model ZN 1 4 ZN ZN 501 A ZN 1 4 ZN ZN 502 A BR 1 5 BR BR 101 E BR 3 5 BR BR 102 E ZN 1 4 ZN ZN 501 F ZN 1 4 ZN ZN 502 F BR 2 5 BR BR 503 F BR 4 5 BR BR 101 H HOH 9 6 HOH HOH 601 A HOH 12 6 HOH HOH 602 A HOH 2 6 HOH HOH 603 A HOH 17 6 HOH HOH 201 E HOH 7 6 HOH HOH 202 E HOH 14 6 HOH HOH 203 E HOH 13 6 HOH HOH 204 E HOH 16 6 HOH HOH 205 E HOH 21 6 HOH HOH 206 E HOH 18 6 HOH HOH 601 F HOH 19 6 HOH HOH 602 F HOH 25 6 HOH HOH 603 F HOH 23 6 HOH HOH 201 H HOH 20 6 HOH HOH 202 H HOH 24 6 HOH HOH 203 H n 1 418 A n 2 419 A n 3 420 A n 4 421 A n 5 422 A n 6 423 A n 7 424 A n 8 425 A SER 426 n 9 SER 426 A LYS 427 n 10 LYS 427 A SER 428 n 11 SER 428 A CYS 429 n 12 CYS 429 A GLU 430 n 13 GLU 430 A PHE 431 n 14 PHE 431 A CYS 432 n 15 CYS 432 A GLY 433 n 16 GLY 433 A LYS 434 n 17 LYS 434 A THR 435 n 18 THR 435 A PHE 436 n 19 PHE 436 A LYS 437 n 20 LYS 437 A PHE 438 n 21 PHE 438 A GLN 439 n 22 GLN 439 A SER 440 n 23 SER 440 A ASN 441 n 24 ASN 441 A LEU 442 n 25 LEU 442 A ILE 443 n 26 ILE 443 A VAL 444 n 27 VAL 444 A HIS 445 n 28 HIS 445 A ARG 446 n 29 ARG 446 A ARG 447 n 30 ARG 447 A SER 448 n 31 SER 448 A HIS 449 n 32 HIS 449 A THR 450 n 33 THR 450 A GLY 451 n 34 GLY 451 A GLU 452 n 35 GLU 452 A LYS 453 n 36 LYS 453 A PRO 454 n 37 PRO 454 A TYR 455 n 38 TYR 455 A LYS 456 n 39 LYS 456 A CYS 457 n 40 CYS 457 A GLN 458 n 41 GLN 458 A LEU 459 n 42 LEU 459 A CYS 460 n 43 CYS 460 A ASP 461 n 44 ASP 461 A HIS 462 n 45 HIS 462 A ALA 463 n 46 ALA 463 A CYS 464 n 47 CYS 464 A SER 465 n 48 SER 465 A GLN 466 n 49 GLN 466 A ALA 467 n 50 ALA 467 A SER 468 n 51 SER 468 A LYS 469 n 52 LYS 469 A LEU 470 n 53 LEU 470 A LYS 471 n 54 LYS 471 A ARG 472 n 55 ARG 472 A HIS 473 n 56 HIS 473 A MET 474 n 57 MET 474 A LYS 475 n 58 LYS 475 A THR 476 n 59 THR 476 A HIS 477 n 60 HIS 477 A MET 478 n 61 MET 478 A n 62 479 A n 63 480 A n 64 481 A n 65 482 A n 66 483 A DG 1 n 1 DG 1 D DA 2 n 2 DA 2 D DA 3 n 3 DA 3 D DT 4 n 4 DT 4 D DG 5 n 5 DG 5 D DG 6 n 6 DG 6 D DC 7 n 7 DC 7 D DC 8 n 8 DC 8 D DA 9 n 9 DA 9 D DT 10 n 10 DT 10 D DC 11 n 11 DC 11 D DT 12 n 12 DT 12 D DC 13 n 13 DC 13 D DA 1 n 1 DA 1 E DG 2 n 2 DG 2 E DA 3 n 3 DA 3 E DT 4 n 4 DT 4 E DG 5 n 5 DG 5 E DG 6 n 6 DG 6 E DC 7 n 7 DC 7 E DC 8 n 8 DC 8 E DA 9 n 9 DA 9 E DT 10 n 10 DT 10 E DT 11 n 11 DT 11 E DC 12 n 12 DC 12 E DG 13 n 13 DG 13 E n 1 418 F n 2 419 F n 3 420 F n 4 421 F n 5 422 F n 6 423 F n 7 424 F n 8 425 F n 9 426 F LYS 427 n 10 LYS 427 F SER 428 n 11 SER 428 F CYS 429 n 12 CYS 429 F GLU 430 n 13 GLU 430 F PHE 431 n 14 PHE 431 F CYS 432 n 15 CYS 432 F GLY 433 n 16 GLY 433 F LYS 434 n 17 LYS 434 F THR 435 n 18 THR 435 F PHE 436 n 19 PHE 436 F LYS 437 n 20 LYS 437 F PHE 438 n 21 PHE 438 F GLN 439 n 22 GLN 439 F SER 440 n 23 SER 440 F ASN 441 n 24 ASN 441 F LEU 442 n 25 LEU 442 F ILE 443 n 26 ILE 443 F VAL 444 n 27 VAL 444 F HIS 445 n 28 HIS 445 F ARG 446 n 29 ARG 446 F ARG 447 n 30 ARG 447 F SER 448 n 31 SER 448 F HIS 449 n 32 HIS 449 F THR 450 n 33 THR 450 F GLY 451 n 34 GLY 451 F GLU 452 n 35 GLU 452 F LYS 453 n 36 LYS 453 F PRO 454 n 37 PRO 454 F TYR 455 n 38 TYR 455 F LYS 456 n 39 LYS 456 F CYS 457 n 40 CYS 457 F GLN 458 n 41 GLN 458 F LEU 459 n 42 LEU 459 F CYS 460 n 43 CYS 460 F ASP 461 n 44 ASP 461 F HIS 462 n 45 HIS 462 F ALA 463 n 46 ALA 463 F CYS 464 n 47 CYS 464 F SER 465 n 48 SER 465 F GLN 466 n 49 GLN 466 F ALA 467 n 50 ALA 467 F SER 468 n 51 SER 468 F LYS 469 n 52 LYS 469 F LEU 470 n 53 LEU 470 F LYS 471 n 54 LYS 471 F ARG 472 n 55 ARG 472 F HIS 473 n 56 HIS 473 F MET 474 n 57 MET 474 F LYS 475 n 58 LYS 475 F THR 476 n 59 THR 476 F HIS 477 n 60 HIS 477 F MET 478 n 61 MET 478 F n 62 479 F n 63 480 F n 64 481 F n 65 482 F n 66 483 F DG 1 n 1 DG 1 G DA 2 n 2 DA 2 G DA 3 n 3 DA 3 G DT 4 n 4 DT 4 G DG 5 n 5 DG 5 G DG 6 n 6 DG 6 G DC 7 n 7 DC 7 G DC 8 n 8 DC 8 G DA 9 n 9 DA 9 G DT 10 n 10 DT 10 G DC 11 n 11 DC 11 G DT 12 n 12 DT 12 G DC 13 n 13 DC 13 G n 1 1 H DG 2 n 2 DG 2 H DA 3 n 3 DA 3 H DT 4 n 4 DT 4 H DG 5 n 5 DG 5 H DG 6 n 6 DG 6 H DC 7 n 7 DC 7 H DC 8 n 8 DC 8 H DA 9 n 9 DA 9 H DT 10 n 10 DT 10 H DT 11 n 11 DT 11 H DC 12 n 12 DC 12 H DG 13 n 13 DG 13 H 1.0703811428583256 -0.28890695334288374 0.005924806339738904 0.43539166920623057 0.21288951731064967 0.13546889123434042 -0.12868485624129491 -0.2339709219312424 0.1918357960900784 0.0776830439839274 0.08658102737807306 0.04224244778987543 -0.0006008797834300507 -0.0362482358182499 0.02160559447006358 0.4513914639298801 0.2960359325605211 0.09878697617281615 0.9277677005930578 0.2528879679169197 0.941070661957814 refined -9.953980383166801 14.497539397282786 -64.5894197238838 X-RAY DIFFRACTION 8.20899807175191 -2.3656122754463254 2.3418870476142426 6.066251092137131 1.5269615094861262 2.6673956335502425 -0.014381552315611381 -0.4135465342191721 -0.20254195762366486 0.028082447031611682 0.021608160043600964 0.5090669714904531 0.10330303984943033 -0.39965450649934786 -0.05849645275632436 0.2528547439011975 -0.052663095112932705 -0.09769681804394413 0.5962271940814097 0.2908612954845953 0.5911300043081119 refined -3.088198855198739 10.203710759546059 -64.48199169238751 X-RAY DIFFRACTION 2.415226157430843 0.23506649402197824 -0.12810772712549273 2.0824712652249007 -0.5834319099544722 2.5718607937362745 -0.021467917414279558 -0.0021973872372276068 0.0260440922303159 -0.026004884417097415 0.006486437146768247 0.15112063152050706 0.06829485661670781 -0.08232957168752725 -0.043637971065136914 0.2172752995911558 -0.14374920072503397 0.0821203312426038 0.3962402165869982 0.042376068481221406 0.4522563317725904 refined 5.519091892892899 4.6950249323994875 -64.40722107389796 X-RAY DIFFRACTION 2.7760186891201526 0.6911915641691985 1.5088826755881626 0.4304496427985798 0.7618694952402321 1.3972993792207176 0.06201194191519532 0.07349525958569338 -0.4678060514763007 0.09672452959648903 0.08254693023521636 -0.18729948799392018 0.18581814315396952 0.26181285036642976 -0.11156387958356558 0.21551609809410277 -0.011515412982909713 -0.08278627915771304 0.42816283045042103 0.2180215983451102 0.6570017769210409 refined 13.406559848269392 3.1001253152151262 -60.56047986550035 X-RAY DIFFRACTION 0.610699598961324 0.17693586119329427 0.2234137452677159 2.3329965855638397 -1.3941117284586706 6.9840965122003915 -0.12626087164148847 0.22987570214316058 0.19276905286329812 0.11117012638619257 -0.2919632312489437 -1.29683007533865 -0.08139635074277357 0.8435321064145311 0.4952846234576258 0.45624711841458215 -0.023229444397606457 0.14775135153250937 0.2653291031081673 0.08316216411910346 0.7508330924126286 refined 15.401034092525936 9.449296765734033 -55.421322254893234 X-RAY DIFFRACTION 0.17875643383720347 -0.027101448390565396 -0.24143364542928902 0.003764666903817533 0.03581626813218381 0.32529829289041406 0.04585190945537618 -0.09572330079878785 -0.06555365153620374 0.4090538479350856 -0.01392796882367937 0.24865472077954773 -0.16228059188947078 -0.0702320221669711 -0.39679874004811505 0.7206080477431447 -0.05736521255325657 0.06586409064965852 0.49798614845900263 0.33503506204236433 0.5631573549466077 refined 4.612897483056062 13.45492727942066 -53.10225183869403 X-RAY DIFFRACTION 1.0533796186994016 0.4282474776346034 -1.396450079844112 1.0041881952985918 -0.416091330837437 1.8785423291896701 0.21410945587524463 -0.07532952744754721 0.12795534965387012 0.1276370442150027 0.015370103400511799 0.08549011538475998 -0.2881043498275284 -0.011816915957161766 0.12239735491019156 0.7911816969401013 0.0199698144315992 0.02058522359532246 0.4819615470818443 0.27694195425953877 0.4424288631660618 refined 5.440154659689727 16.39661573600074 -54.275597214666114 X-RAY DIFFRACTION 2.266353035455465 0.3271441150690627 -0.4413274035558456 1.603093183360849 -0.27982406648926256 1.392695648426452 -0.1736505418808546 0.2800656261998835 0.031097794122079865 -0.00970114113556498 -0.04294725673001008 0.3401737812999731 0.12170092248080232 -0.2977743305050498 0.10699387227821533 0.2642510006008751 -0.1422827589156748 -0.06932860133877046 0.4308810811995701 0.14664746535004733 0.6851962069654634 refined -6.8129509234579295 -3.66867881232901 -16.684753417766085 X-RAY DIFFRACTION 1.534487932935852 0.1921671379172529 -0.46974435179684787 0.6503751288206513 0.31687163650464856 0.3689545822353777 -0.33434201863641544 0.4962528575017233 0.8361948140161785 -0.03739231204048927 -0.0052428060244609775 -0.45440019095670664 -0.40449777808833426 0.9493942363678255 0.3069081816357916 0.5563599309533757 -0.14803557952640067 -0.3097921812256781 1.127638126249629 0.41546172283894117 0.9965669373072257 refined 12.045665362415106 0.9177596785190851 -21.367290072810395 X-RAY DIFFRACTION 0.6401240783753167 -0.3752720026744865 -0.2200106654193999 0.3819816252456385 -0.23807138759342933 0.9097412216608827 -0.1463124066871666 0.036486243340435945 0.1296569747326344 -0.4541729544242651 0.06657333941685878 0.09838657109626035 -0.13830458443125015 0.1474457914591537 0.05087684183223356 0.9731830045694879 0.04227576046425583 0.041187933313582024 0.7116221847376454 0.4298696291597203 0.6570066529026629 refined 3.352102316916181 -6.148843272832147 -27.134310982308648 X-RAY DIFFRACTION 1.0723123152947023 -0.8286847269800087 1.5470225214092979 2.30202014403971 -0.7325095410904091 2.4104570610092027 0.07209001141731566 -0.1658969151565873 -0.24616262629623056 -0.19300629549481688 -0.08696542843573393 -0.152850238145411 0.65036642387447 0.27955541228153163 0.035730189065757124 0.9564005925439224 -0.057143607180501155 0.12454074764746617 0.7393826808395492 0.3671942506271078 0.5837511390556432 refined 3.741243716219375 -9.803054008866969 -24.864887183676963 X-RAY DIFFRACTION A 426 A 1 A 438 A 13 X-RAY DIFFRACTION 1 chain 'A' and (resid 426 through 438 ) A 439 A 14 A 450 A 25 X-RAY DIFFRACTION 2 chain 'A' and (resid 439 through 450 ) A 451 A 26 A 455 A 30 X-RAY DIFFRACTION 3 chain 'A' and (resid 451 through 455 ) A 456 A 31 A 466 A 41 X-RAY DIFFRACTION 4 chain 'A' and (resid 456 through 466 ) A 467 A 42 A 478 A 53 X-RAY DIFFRACTION 5 chain 'A' and (resid 467 through 478 ) D 1 B D 13 B X-RAY DIFFRACTION 6 chain 'D' and (resid 1 through 13 ) E 1 C E 13 C X-RAY DIFFRACTION 7 chain 'E' and (resid 1 through 13 ) F 427 D 1 F 455 D 29 X-RAY DIFFRACTION 8 chain 'F' and (resid 427 through 455 ) F 456 D 30 F 478 D 52 X-RAY DIFFRACTION 9 chain 'F' and (resid 456 through 478 ) G 1 E G 13 E X-RAY DIFFRACTION 10 chain 'G' and (resid 1 through 13 ) H 2 F H 13 F X-RAY DIFFRACTION 11 chain 'H' and (resid 2 through 13 ) author_defined_assembly 3 trimeric author_defined_assembly 3 trimeric fluorescence resonance energy transfer A CYS 429 A SG CYS 12 1_555 A ZN 502 H ZN ZN 1_555 A CYS 432 A SG CYS 15 1_555 117.7 A CYS 429 A SG CYS 12 1_555 A ZN 502 H ZN ZN 1_555 A HIS 445 A NE2 HIS 28 1_555 110.5 A CYS 432 A SG CYS 15 1_555 A ZN 502 H ZN ZN 1_555 A HIS 445 A NE2 HIS 28 1_555 62.0 A CYS 429 A SG CYS 12 1_555 A ZN 502 H ZN ZN 1_555 A HIS 449 A NE2 HIS 32 1_555 114.5 A CYS 432 A SG CYS 15 1_555 A ZN 502 H ZN ZN 1_555 A HIS 449 A NE2 HIS 32 1_555 127.5 A HIS 445 A NE2 HIS 28 1_555 A ZN 502 H ZN ZN 1_555 A HIS 449 A NE2 HIS 32 1_555 104.5 A CYS 457 A SG CYS 40 1_555 A ZN 501 G ZN ZN 1_555 A CYS 460 A SG CYS 43 1_555 115.2 A CYS 457 A SG CYS 40 1_555 A ZN 501 G ZN ZN 1_555 A HIS 473 A NE2 HIS 56 1_555 115.0 A CYS 460 A SG CYS 43 1_555 A ZN 501 G ZN ZN 1_555 A HIS 473 A NE2 HIS 56 1_555 76.7 A CYS 457 A SG CYS 40 1_555 A ZN 501 G ZN ZN 1_555 A HIS 477 A NE2 HIS 60 1_555 133.4 A CYS 460 A SG CYS 43 1_555 A ZN 501 G ZN ZN 1_555 A HIS 477 A NE2 HIS 60 1_555 94.1 A HIS 473 A NE2 HIS 56 1_555 A ZN 501 G ZN ZN 1_555 A HIS 477 A NE2 HIS 60 1_555 106.3 F CYS 429 D SG CYS 12 1_555 F ZN 502 L ZN ZN 1_555 F CYS 432 D SG CYS 15 1_555 110.7 F CYS 429 D SG CYS 12 1_555 F ZN 502 L ZN ZN 1_555 F HIS 445 D NE2 HIS 28 1_555 106.2 F CYS 432 D SG CYS 15 1_555 F ZN 502 L ZN ZN 1_555 F HIS 445 D NE2 HIS 28 1_555 77.2 F CYS 429 D SG CYS 12 1_555 F ZN 502 L ZN ZN 1_555 F HIS 449 D NE2 HIS 32 1_555 103.4 F CYS 432 D SG CYS 15 1_555 F ZN 502 L ZN ZN 1_555 F HIS 449 D NE2 HIS 32 1_555 144.7 F HIS 445 D NE2 HIS 28 1_555 F ZN 502 L ZN ZN 1_555 F HIS 449 D NE2 HIS 32 1_555 102.1 F CYS 457 D SG CYS 40 1_555 F ZN 501 K ZN ZN 1_555 F CYS 460 D SG CYS 43 1_555 116.3 F CYS 457 D SG CYS 40 1_555 F ZN 501 K ZN ZN 1_555 F HIS 473 D NE2 HIS 56 1_555 116.8 F CYS 460 D SG CYS 43 1_555 F ZN 501 K ZN ZN 1_555 F HIS 473 D NE2 HIS 56 1_555 78.6 F CYS 457 D SG CYS 40 1_555 F ZN 501 K ZN ZN 1_555 F HIS 477 D NE2 HIS 60 1_555 133.5 F CYS 460 D SG CYS 43 1_555 F ZN 501 K ZN ZN 1_555 F HIS 477 D NE2 HIS 60 1_555 95.1 F HIS 473 D NE2 HIS 56 1_555 F ZN 501 K ZN ZN 1_555 F HIS 477 D NE2 HIS 60 1_555 101.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 455 A N TYR 38 A O CYS 464 A O CYS 47 F N TYR 455 D N TYR 38 F O CYS 464 D O CYS 47 1 A CG LYS 434 A CG LYS 17 1 Y 1 A CD LYS 434 A CD LYS 17 1 Y 1 A CE LYS 434 A CE LYS 17 1 Y 1 A NZ LYS 434 A NZ LYS 17 1 Y 1 A CG LYS 437 A CG LYS 20 1 Y 1 A CD LYS 437 A CD LYS 20 1 Y 1 A CE LYS 437 A CE LYS 20 1 Y 1 A NZ LYS 437 A NZ LYS 20 1 Y 1 A CG MET 478 A CG MET 61 1 Y 1 A SD MET 478 A SD MET 61 1 Y 1 A CE MET 478 A CE MET 61 1 Y 1 F CG LYS 434 D CG LYS 17 1 Y 1 F CD LYS 434 D CD LYS 17 1 Y 1 F CE LYS 434 D CE LYS 17 1 Y 1 F NZ LYS 434 D NZ LYS 17 1 Y 1 F CG LYS 437 D CG LYS 20 1 Y 1 F CD LYS 437 D CD LYS 20 1 Y 1 F CE LYS 437 D CE LYS 20 1 Y 1 F NZ LYS 437 D NZ LYS 20 1 Y 1 F CG LEU 459 D CG LEU 42 1 Y 1 F CD1 LEU 459 D CD1 LEU 42 1 Y 1 F CD2 LEU 459 D CD2 LEU 42 1 Y 1 F CG ASP 461 D CG ASP 44 1 Y 1 F OD1 ASP 461 D OD1 ASP 44 1 Y 1 F OD2 ASP 461 D OD2 ASP 44 1 Y 1 F CG LYS 475 D CG LYS 58 1 Y 1 F CD LYS 475 D CD LYS 58 1 Y 1 F CE LYS 475 D CE LYS 58 1 Y 1 F NZ LYS 475 D NZ LYS 58 1 Y 1 F CG MET 478 D CG MET 61 1 Y 1 F SD MET 478 D SD MET 61 1 Y 1 F CE MET 478 D CE MET 61 1 Y 1 A GLY 418 A GLY 1 1 Y 1 A PRO 419 A PRO 2 1 Y 1 A LEU 420 A LEU 3 1 Y 1 A GLY 421 A GLY 4 1 Y 1 A SER 422 A SER 5 1 Y 1 A PRO 423 A PRO 6 1 Y 1 A ALA 424 A ALA 7 1 Y 1 A LYS 425 A LYS 8 1 Y 1 A HIS 479 A HIS 62 1 Y 1 A LYS 480 A LYS 63 1 Y 1 A ALA 481 A ALA 64 1 Y 1 A GLY 482 A GLY 65 1 Y 1 A SER 483 A SER 66 1 Y 1 F GLY 418 D GLY 1 1 Y 1 F PRO 419 D PRO 2 1 Y 1 F LEU 420 D LEU 3 1 Y 1 F GLY 421 D GLY 4 1 Y 1 F SER 422 D SER 5 1 Y 1 F PRO 423 D PRO 6 1 Y 1 F ALA 424 D ALA 7 1 Y 1 F LYS 425 D LYS 8 1 Y 1 F SER 426 D SER 9 1 Y 1 F HIS 479 D HIS 62 1 Y 1 F LYS 480 D LYS 63 1 Y 1 F ALA 481 D ALA 64 1 Y 1 F GLY 482 D GLY 65 1 Y 1 F SER 483 D SER 66 1 Y 1 H DA 1 F DA 1 1 Y 1 2.29 0.30 108.30 110.59 G G G O4' C1' N1 DC DC DC 8 8 8 N 1 A THR 435 57.60 70.99 1 F LEU 459 -92.20 -60.51 60.59 0.2872 0.2344 0.2369 2.83 34.15 460 9445 9905 4.64 68.51 0.3998 1 FREE R-VALUE 1.96 MOLECULAR REPLACEMENT 26.9539 0.9000 1.1000 GeoStd + Monomer Library + CDL v1.2 FLAT BULK SOLVENT MODEL 2.83 34.15 16 1878 8 1036 818 0.0036 2011 0.5898 2903 0.0332 317 0.0030 193 28.5454 843 d_2 A A ens_1 X-RAY DIFFRACTION Torsion NCS 0.8713798038589904 d_2 B D ens_2 X-RAY DIFFRACTION Torsion NCS 0.29503592728953726 d_2 C E ens_3 X-RAY DIFFRACTION Torsion NCS 0.4960785918614925 0.3937 0.2979 3.24 45 1091 23.66 0.3353 0.2410 4.08 212 3790 83.24 0.2201 0.2160 34.15 203 4564 98.49 7.70 2.83 34.15 12UP 14314 0.996 1 3.4 3.6 99.1 2.83 2.88 658 0.453 1 refinement PHENIX 2.0_5885 data reduction autoPROC data scaling autoPROC phasing PHENIX 1 triclinic P 1 P 1 x,y,z N BCL11B ZF2-3 in Complex with a DNA Sequence Observed in the Human Globin Locus Containing Motif TGGCCA (Oligo 4-2) 1 N N 2 N N 3 N N 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 5 N N 4 N N 4 N N 5 N N 5 N N 6 N N 6 N N 6 N N 6 N N A PHE 438 A PHE 21 HELX_P A GLY 451 A GLY 34 1 AA1 14 A GLN 466 A GLN 49 HELX_P A MET 478 A MET 61 1 AA2 13 F PHE 438 D PHE 21 HELX_P F GLY 451 D GLY 34 1 AA3 14 F GLN 466 D GLN 49 HELX_P F MET 478 D MET 61 1 AA4 13 metalc 2.307 A CYS 429 A SG CYS 12 1_555 A ZN 502 H ZN ZN 1_555 metalc 2.306 A CYS 432 A SG CYS 15 1_555 A ZN 502 H ZN ZN 1_555 metalc 2.054 A HIS 445 A NE2 HIS 28 1_555 A ZN 502 H ZN ZN 1_555 metalc 2.024 A HIS 449 A NE2 HIS 32 1_555 A ZN 502 H ZN ZN 1_555 metalc 2.311 A CYS 457 A SG CYS 40 1_555 A ZN 501 G ZN ZN 1_555 metalc 2.293 A CYS 460 A SG CYS 43 1_555 A ZN 501 G ZN ZN 1_555 metalc 2.054 A HIS 473 A NE2 HIS 56 1_555 A ZN 501 G ZN ZN 1_555 metalc 2.068 A HIS 477 A NE2 HIS 60 1_555 A ZN 501 G ZN ZN 1_555 metalc 2.308 F CYS 429 D SG CYS 12 1_555 F ZN 502 L ZN ZN 1_555 metalc 2.310 F CYS 432 D SG CYS 15 1_555 F ZN 502 L ZN ZN 1_555 metalc 2.050 F HIS 445 D NE2 HIS 28 1_555 F ZN 502 L ZN ZN 1_555 metalc 2.032 F HIS 449 D NE2 HIS 32 1_555 F ZN 502 L ZN ZN 1_555 metalc 2.298 F CYS 457 D SG CYS 40 1_555 F ZN 501 K ZN ZN 1_555 metalc 2.308 F CYS 460 D SG CYS 43 1_555 F ZN 501 K ZN ZN 1_555 metalc 2.011 F HIS 473 D NE2 HIS 56 1_555 F ZN 501 K ZN ZN 1_555 metalc 2.007 F HIS 477 D NE2 HIS 60 1_555 F ZN 501 K ZN ZN 1_555 hydrog WATSON-CRICK D DG 1 B N1 DG 1 1_555 E DC 12 C N3 DC 12 1_555 hydrog WATSON-CRICK D DG 1 B N2 DG 1 1_555 E DC 12 C O2 DC 12 1_555 hydrog WATSON-CRICK D DG 1 B O6 DG 1 1_555 E DC 12 C N4 DC 12 1_555 hydrog WATSON-CRICK D DA 2 B N1 DA 2 1_555 E DT 11 C N3 DT 11 1_555 hydrog WATSON-CRICK D DA 2 B N6 DA 2 1_555 E DT 11 C O4 DT 11 1_555 hydrog WATSON-CRICK D DA 3 B N1 DA 3 1_555 E DT 10 C N3 DT 10 1_555 hydrog WATSON-CRICK D DA 3 B N6 DA 3 1_555 E DT 10 C O4 DT 10 1_555 hydrog WATSON-CRICK D DT 4 B N3 DT 4 1_555 E DA 9 C N1 DA 9 1_555 hydrog WATSON-CRICK D DT 4 B O4 DT 4 1_555 E DA 9 C N6 DA 9 1_555 hydrog WATSON-CRICK D DG 5 B N1 DG 5 1_555 E DC 8 C N3 DC 8 1_555 hydrog WATSON-CRICK D DG 5 B N2 DG 5 1_555 E DC 8 C O2 DC 8 1_555 hydrog WATSON-CRICK D DG 5 B O6 DG 5 1_555 E DC 8 C N4 DC 8 1_555 hydrog WATSON-CRICK D DG 6 B N1 DG 6 1_555 E DC 7 C N3 DC 7 1_555 hydrog WATSON-CRICK D DG 6 B N2 DG 6 1_555 E DC 7 C O2 DC 7 1_555 hydrog WATSON-CRICK D DG 6 B O6 DG 6 1_555 E DC 7 C N4 DC 7 1_555 hydrog WATSON-CRICK D DC 7 B N3 DC 7 1_555 E DG 6 C N1 DG 6 1_555 hydrog WATSON-CRICK D DC 7 B N4 DC 7 1_555 E DG 6 C O6 DG 6 1_555 hydrog WATSON-CRICK D DC 7 B O2 DC 7 1_555 E DG 6 C N2 DG 6 1_555 hydrog WATSON-CRICK D DC 8 B N3 DC 8 1_555 E DG 5 C N1 DG 5 1_555 hydrog WATSON-CRICK D DC 8 B N4 DC 8 1_555 E DG 5 C O6 DG 5 1_555 hydrog WATSON-CRICK D DC 8 B O2 DC 8 1_555 E DG 5 C N2 DG 5 1_555 hydrog WATSON-CRICK D DA 9 B N1 DA 9 1_555 E DT 4 C N3 DT 4 1_555 hydrog WATSON-CRICK D DA 9 B N6 DA 9 1_555 E DT 4 C O4 DT 4 1_555 hydrog WATSON-CRICK D DT 10 B N3 DT 10 1_555 E DA 3 C N1 DA 3 1_555 hydrog WATSON-CRICK D DT 10 B O4 DT 10 1_555 E DA 3 C N6 DA 3 1_555 hydrog DT-DC MISPAIR D DT 10 B O4 DT 10 1_555 G DC 13 E N4 DC 13 1_555 hydrog WATSON-CRICK D DC 11 B N3 DC 11 1_555 E DG 2 C N1 DG 2 1_555 hydrog WATSON-CRICK D DC 11 B N4 DC 11 1_555 E DG 2 C O6 DG 2 1_555 hydrog WATSON-CRICK D DC 11 B O2 DC 11 1_555 E DG 2 C N2 DG 2 1_555 hydrog WATSON-CRICK D DT 12 B N3 DT 12 1_555 E DA 1 C N1 DA 1 1_555 hydrog WATSON-CRICK D DT 12 B O4 DT 12 1_555 E DA 1 C N6 DA 1 1_555 hydrog DC-DT MISPAIR D DC 13 B N4 DC 13 1_555 G DT 10 E O4 DT 10 1_555 hydrog DC-DG PAIR D DC 13 B N4 DC 13 1_555 H DG 2 F O6 DG 2 1_555 hydrog HOOGSTEEN E DA 1 C N6 DA 1 1_555 G DT 12 E O4 DT 12 1_555 hydrog HOOGSTEEN E DA 1 C N7 DA 1 1_555 G DT 12 E N3 DT 12 1_555 hydrog DG-DC PAIR E DG 2 C O6 DG 2 1_555 G DC 13 E N4 DC 13 1_555 hydrog WATSON-CRICK G DG 1 E N1 DG 1 1_555 H DC 12 F N3 DC 12 1_555 hydrog WATSON-CRICK G DG 1 E N2 DG 1 1_555 H DC 12 F O2 DC 12 1_555 hydrog WATSON-CRICK G DG 1 E O6 DG 1 1_555 H DC 12 F N4 DC 12 1_555 hydrog WATSON-CRICK G DA 2 E N1 DA 2 1_555 H DT 11 F N3 DT 11 1_555 hydrog WATSON-CRICK G DA 2 E N6 DA 2 1_555 H DT 11 F O4 DT 11 1_555 hydrog WATSON-CRICK G DA 3 E N1 DA 3 1_555 H DT 10 F N3 DT 10 1_555 hydrog WATSON-CRICK G DA 3 E N6 DA 3 1_555 H DT 10 F O4 DT 10 1_555 hydrog WATSON-CRICK G DT 4 E N3 DT 4 1_555 H DA 9 F N1 DA 9 1_555 hydrog WATSON-CRICK G DT 4 E O4 DT 4 1_555 H DA 9 F N6 DA 9 1_555 hydrog WATSON-CRICK G DG 5 E N1 DG 5 1_555 H DC 8 F N3 DC 8 1_555 hydrog WATSON-CRICK G DG 5 E N2 DG 5 1_555 H DC 8 F O2 DC 8 1_555 hydrog WATSON-CRICK G DG 5 E O6 DG 5 1_555 H DC 8 F N4 DC 8 1_555 hydrog WATSON-CRICK G DG 6 E N1 DG 6 1_555 H DC 7 F N3 DC 7 1_555 hydrog WATSON-CRICK G DG 6 E N2 DG 6 1_555 H DC 7 F O2 DC 7 1_555 hydrog WATSON-CRICK G DG 6 E O6 DG 6 1_555 H DC 7 F N4 DC 7 1_555 hydrog WATSON-CRICK G DC 7 E N3 DC 7 1_555 H DG 6 F N1 DG 6 1_555 hydrog WATSON-CRICK G DC 7 E N4 DC 7 1_555 H DG 6 F O6 DG 6 1_555 hydrog WATSON-CRICK G DC 7 E O2 DC 7 1_555 H DG 6 F N2 DG 6 1_555 hydrog WATSON-CRICK G DC 8 E N3 DC 8 1_555 H DG 5 F N1 DG 5 1_555 hydrog WATSON-CRICK G DC 8 E N4 DC 8 1_555 H DG 5 F O6 DG 5 1_555 hydrog WATSON-CRICK G DC 8 E O2 DC 8 1_555 H DG 5 F N2 DG 5 1_555 hydrog WATSON-CRICK G DA 9 E N1 DA 9 1_555 H DT 4 F N3 DT 4 1_555 hydrog WATSON-CRICK G DA 9 E N6 DA 9 1_555 H DT 4 F O4 DT 4 1_555 hydrog WATSON-CRICK G DT 10 E N3 DT 10 1_555 H DA 3 F N1 DA 3 1_555 hydrog WATSON-CRICK G DT 10 E O4 DT 10 1_555 H DA 3 F N6 DA 3 1_555 hydrog WATSON-CRICK G DC 11 E N3 DC 11 1_555 H DG 2 F N1 DG 2 1_555 hydrog WATSON-CRICK G DC 11 E N4 DC 11 1_555 H DG 2 F O6 DG 2 1_555 hydrog WATSON-CRICK G DC 11 E O2 DC 11 1_555 H DG 2 F N2 DG 2 1_555 DNA BINDING PROTEIN/DNA TRANSCRIPTION FACTOR, DNA BINDING, TRANSCRIPTION, TRANSCRIPTION-DNA COMPLEX, GLOBIN LOCUS, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex (chain "A" and (resid 427 through 458 or (resid 459 and (name N or name CA or name C or name O or name CB )) or resid 460 or (resid 461 and (name N or name CA or name C or name O or name CB )) or resid 462 through 474 or (resid 475 and (name N or name CA or name C or name O or name CB )) or resid 476 through 478)) chain "F" chain "D" chain "G" (chain "E" and resid 2 through 13) chain "H" A LYS 427 A LYS 10 A MET 478 A MET 61 F LYS 427 D LYS 10 F MET 478 D MET 61 D DG 1 B DG 1 D DC 7 B DC 7 G DG 1 E DG 1 G DC 7 E DC 7 E DG 2 C DG 2 E DG 2 C DG 2 H DG 2 F DG 2 H DG 2 F DG 2 given 0.9952906228203497 0.022237929649086805 0.0943506789101264 0.021729160705510762 -0.9997433037691204 0.00641639648389488 0.09446914682007872 -0.004336018188005858 -0.9955183470159451 3.2261184385341712 7.582628507089789 -80.36131533378631 given 0.9949263816484084 0.024535080373094972 0.0975680528200289 0.025579002394807537 -0.9996280154884677 -0.009462837157751694 0.09729958754533655 0.011910519790230225 -0.9951838673239403 3.6125697918003756 6.675103748096856 -80.58866763522181 given 0.9936216800669764 0.04082870516840649 0.10511409865070181 0.04212887994507743 -0.9990603436493478 -0.010177780790536863 0.10459978190919611 0.014541202891037084 -0.9944080847635091 3.816207627059196 6.571757402767453 -80.6303281656469 BC11B_HUMAN UNP 1 423 Q9C0K0 PAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGS 12UP PDB 2 1 12UP 12UP PDB 3 1 12UP 423 483 12UP 423 483 Q9C0K0 A 1 6 66 1 13 12UP 1 13 12UP D 2 1 13 1 13 12UP 1 13 12UP E 3 1 13 423 483 12UP 423 483 Q9C0K0 F 1 6 66 1 13 12UP 1 13 12UP G 2 1 13 1 13 12UP 1 13 12UP H 3 1 13 1 expression tag GLY 418 12UP A Q9C0K0 UNP 1 1 expression tag PRO 419 12UP A Q9C0K0 UNP 2 1 expression tag LEU 420 12UP A Q9C0K0 UNP 3 1 expression tag GLY 421 12UP A Q9C0K0 UNP 4 1 expression tag SER 422 12UP A Q9C0K0 UNP 5 4 expression tag GLY 418 12UP F Q9C0K0 UNP 1 4 expression tag PRO 419 12UP F Q9C0K0 UNP 2 4 expression tag LEU 420 12UP F Q9C0K0 UNP 3 4 expression tag GLY 421 12UP F Q9C0K0 UNP 4 4 expression tag SER 422 12UP F Q9C0K0 UNP 5 2 2 anti-parallel anti-parallel A TYR 455 A TYR 38 A LYS 456 A LYS 39 A ALA 463 A ALA 46 A CYS 464 A CYS 47 F TYR 455 D TYR 38 F LYS 456 D LYS 39 F ALA 463 D ALA 46 F CYS 464 D CYS 47 1 P 1 P 1