0.006144 0.000000 0.003639 0.000000 0.027834 0.000000 0.000000 0.000000 0.011948 0.00000 0.00000 0.00000 Stelzig, D. Hall, S.D. 0000-0002-1384-6625 Batey, R.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 120.641 90.000 162.764 35.927 97.279 489428.209 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C10 H16 N5 O14 P3 523.180 n GUANOSINE-5'-TRIPHOSPHATE non-polymer H2 O 18.015 WATER non-polymer Sr 2 87.620 STRONTIUM ION non-polymer C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 R C N 49 N O N 50 R C N 51 N N N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N C N 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N P N 75 N O N 76 N O N 77 N O N 78 N C N 79 R C N 80 N O N 81 S C N 82 N O N 83 R C N 84 N O N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C N 90 N C N 91 N O N 92 N N N 93 N C N 94 N N N 95 N N Y 96 N C N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N P N 112 N O N 113 N O N 114 N O N 115 N O N 116 N P N 117 N O N 118 N O N 119 N O N 120 N P N 121 N O N 122 N O N 123 N O N 124 N C N 125 R C N 126 N O N 127 S C N 128 N O N 129 R C N 130 N O N 131 R C Y 132 N N Y 133 N C Y 134 N N Y 135 N C N 136 N C N 137 N O N 138 N N N 139 N C N 140 N N N 141 N N Y 142 N C N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N H N 161 N H N 162 N SR N 163 N O N 164 N P N 165 N O N 166 N O N 167 N O N 168 N C N 169 R C N 170 N O N 171 S C N 172 N O N 173 R C N 174 N O N 175 R C N 176 N N N 177 N C N 178 N O N 179 N N N 180 N C N 181 N O N 182 N C N 183 N C N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing Y 100 N sing Y 101 N sing Y 102 N doub N 103 N sing Y 104 N sing N 105 N sing Y 106 N doub N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing Y 150 N sing Y 151 N sing Y 152 N doub N 153 N sing Y 154 N sing N 155 N sing Y 156 N doub N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N doub N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N doub N 201 N sing N 202 N sing To Be Published 0353 Apo structure of dopamine-binding aptamer, DGR-1B 0000-0002-1384-6625 10.2210/pdb12cj/pdb pdb_000012cj 100 1 N CCD 2020-10-03 ADSC QUANTUM 315r SINGLE WAVELENGTH M x-ray 1 0.99992 1.0 8.2.1 ALS 0.99992 SYNCHROTRON ALS BEAMLINE 8.2.1 24954.664 DGR-1B 2 man polymer 87.620 STRONTIUM ION 27 nat non-polymer 18.015 water 18 nat water no yes (GTP)GACUAGACUCCGUAAUUCGCGUGGAUAUGGCACGCAGUAAGGUAUUGGGCACCGUAAAUGUCCAUAUGUUAGUCC A GGACUAGACUCCGUAAUUCGCGUGGAUAUGGCACGCAGUAAGGUAUUGGGCACCGUAAAUGUCCAUAUGUUAGUCCA A,B polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 77 32630 synthetic construct 32630 synthetic construct Biological sequence 1 2.45 49.7 VAPOR DIFFUSION, HANGING DROP 6.0 10% v/v MPD, 20 mM spermine, 50 mM strontium chloride, 50 mM lithium chloride, 40 mM sodium cacodylate 293 2.598 1 19 A 1 A 76 -5.250 A_GTP1:C76_A 1 -6.322 0.234 0.396 -0.101 1.085 1 19 A 2 A 75 -0.571 A_G2:C75_A 2 -16.710 -0.191 0.000 -0.103 3.541 1 20 A 3 A 74 3.628 A_A3:U74_A 3 -14.129 0.073 0.081 -0.165 7.736 1 19 A 4 A 73 -0.073 A_C4:G73_A 4 -13.994 -0.172 -0.190 -0.105 -2.605 1 20 A 5 A 72 1.134 A_U5:A72_A 5 -14.292 -0.345 0.364 -0.150 -9.934 1 20 A 6 A 71 -4.241 A_A6:U71_A 6 -9.920 -0.126 0.568 0.068 -2.778 6 10 A 7 A 41 -66.920 A_G7:A41_A 7 10.340 3.660 -0.346 -3.628 0.225 1 19 A 12 A 42 -3.703 A_C12:G42_A 8 -10.428 0.147 0.169 -0.152 14.597 1 19 A 11 A 43 5.050 A_C11:G43_A 9 -26.753 -0.023 -0.229 -0.005 17.000 2 21 A 8 A 44 174.452 A_A8:U44_A 10 -18.450 -0.153 -0.214 0.533 -26.769 1 20 A 37 A 18 8.417 A_A37:U18_A 11 -11.283 -0.105 -0.913 0.328 -2.594 1 19 A 36 A 20 6.133 A_C36:G20_A 12 -22.431 -0.154 0.024 0.234 1.288 1 19 A 35 A 21 -1.235 A_G35:C21_A 13 -10.238 -0.125 0.014 -0.492 6.196 1 19 A 34 A 22 -3.631 A_C34:G22_A 14 -12.275 -0.176 0.205 -0.193 -7.882 1 20 A 33 A 23 2.432 A_A33:U23_A 15 -6.502 0.190 0.319 0.219 -14.684 1 19 A 32 A 24 2.183 A_C32:G24_A 16 -4.518 -0.113 0.323 -0.039 2.592 4 24 A 15 A 68 -99.731 A_A15:U68_A 17 -15.729 -4.278 -0.395 -1.653 9.923 4 5 A 16 A 67 -117.627 A_A16:A67_A 18 -27.453 -3.985 -0.401 2.512 -6.520 4 5 A 28 A 57 -108.833 A_A28:A57_A 19 -3.482 -4.461 -0.005 1.155 2.133 1 19 A 54 A 30 -8.582 A_C54:G30_A 20 -14.932 -0.357 0.340 -0.171 -6.550 4 24 A 27 A 58 -104.657 A_U27:A58_A 21 1.580 4.284 -0.464 -1.739 20.757 1 19 A 31 A 53 0.293 A_G31:C53_A 22 -9.039 -0.501 0.351 -0.078 9.923 1 20 A 60 A 52 2.829 A_U60:A52_A 23 -6.931 -0.376 -0.307 0.152 -2.553 1 19 A 61 A 51 4.302 A_G61:C51_A 24 -12.229 -0.226 0.063 0.040 -4.394 1 28 A 62 A 50 2.454 A_U62:G50_A 25 -5.149 2.246 0.083 -0.450 -1.424 1 19 A 63 A 49 3.294 A_C63:G49_A 26 -9.322 -0.297 0.117 0.265 1.920 1 19 A 64 A 48 -1.913 A_C64:G48_A 27 -5.004 0.025 -0.253 0.141 -8.180 1 20 A 65 A 47 10.147 A_A65:U47_A 28 -20.884 0.113 -0.196 0.482 3.260 1 16 A 66 A 46 10.447 A_U66:U46_A 29 -23.209 2.767 0.624 -2.103 -19.577 1 8 B 1 B 77 26.183 B_GTP1:A77_B 30 18.350 0.230 2.482 -0.059 -7.134 1 19 B 2 B 75 1.938 B_G2:C75_B 31 -7.948 0.438 -0.441 0.318 -6.078 1 20 B 3 B 74 -0.256 B_A3:U74_B 32 -5.237 -0.479 -0.222 -0.004 5.154 1 19 B 4 B 73 1.203 B_C4:G73_B 33 -8.300 -0.515 -0.400 0.475 1.699 1 20 B 5 B 72 -1.929 B_U5:A72_B 34 -16.257 -0.446 -0.265 -0.031 -6.674 1 20 B 6 B 71 -4.241 B_A6:U71_B 35 -13.339 0.022 0.073 -0.102 -9.977 6 10 B 7 B 41 -62.878 B_G7:A41_B 36 12.775 4.188 0.028 -3.564 -2.880 1 19 B 12 B 42 -4.827 B_C12:G42_B 37 -11.618 0.442 0.457 -0.256 4.861 1 19 B 11 B 43 4.235 B_C11:G43_B 38 -19.196 -0.168 0.586 0.033 16.069 2 21 B 8 B 44 170.401 B_A8:U44_B 39 -27.567 -0.212 -0.465 0.697 -20.809 1 20 B 37 B 18 4.827 B_A37:U18_B 40 1.544 -0.154 -0.245 0.153 -10.284 1 19 B 36 B 20 -5.100 B_C36:G20_B 41 -19.632 0.127 0.195 0.111 0.402 1 19 B 35 B 21 -2.230 B_G35:C21_B 42 -12.009 -0.226 0.101 -0.257 5.474 1 19 B 34 B 22 -0.218 B_C34:G22_B 43 -6.605 -0.126 0.147 0.032 -2.716 1 20 B 33 B 23 -2.824 B_A33:U23_B 44 2.160 0.619 0.061 -0.063 -10.027 1 19 B 32 B 24 1.316 B_C32:G24_B 45 -4.260 0.026 0.145 -0.123 23.670 12 B 13 B 69 -172.485 B_G13:G69_B 46 2.573 -3.474 1.568 -8.383 -1.281 4 24 B 15 B 68 -96.474 B_A15:U68_B 47 -8.649 -4.118 -0.018 -2.234 18.501 4 5 B 16 B 67 -110.633 B_A16:A67_B 48 -22.618 -4.151 -0.330 1.439 2.646 4 5 B 28 B 57 -111.205 B_A28:A57_B 49 6.570 -4.456 0.224 1.308 -6.342 1 19 B 54 B 30 -5.535 B_C54:G30_B 50 -9.002 -0.136 0.913 -0.183 -0.929 4 24 B 58 B 27 -99.865 B_A58:U27_B 51 -0.500 -4.181 -0.672 -2.103 22.598 1 19 B 31 B 53 5.339 B_G31:C53_B 52 -6.818 -0.581 0.565 0.189 5.382 1 20 B 60 B 52 -0.313 B_U60:A52_B 53 -11.659 0.045 -0.304 0.048 -1.595 1 19 B 61 B 51 2.065 B_G61:C51_B 54 -9.189 -0.444 -0.059 0.013 6.804 1 28 B 62 B 50 0.475 B_U62:G50_B 55 -7.015 1.851 -0.176 -0.446 3.621 1 19 B 63 B 49 4.129 B_C63:G49_B 56 -5.797 -0.093 -0.316 -0.028 1.233 1 19 B 64 B 48 -3.633 B_C64:G48_B 57 4.244 -0.357 -0.269 -0.058 13.415 1 20 B 65 B 47 3.073 B_A65:U47_B 58 0.070 0.062 0.323 -0.150 24.272 1 16 B 66 B 46 13.363 B_U66:U46_B 59 -14.093 2.555 0.241 -1.828 3.082 32.685 A A 1 2 7.162 A A 76 75 3.308 4.019 -0.113 -1.614 AA_GTP1G2:C75C76_AA 1 1.495 -2.663 32.410 -3.551 0.455 2.972 34.953 A A 2 3 7.877 A A 75 74 3.158 4.717 0.099 -1.190 AA_G2A3:U74C75_AA 2 -0.772 1.289 34.635 -2.652 -0.275 3.160 31.231 A A 3 4 3.706 A A 74 73 3.242 1.990 0.221 -1.298 AA_A3C4:G73U74_AA 3 3.600 -6.705 30.966 -2.781 0.261 2.674 33.205 A A 4 5 18.727 A A 73 72 3.362 10.522 0.327 -1.619 AA_C4U5:A72G73_AA 4 -1.862 3.314 31.485 -4.507 -0.868 2.873 36.389 A A 5 6 9.860 A A 72 71 3.201 6.130 0.157 -1.761 AA_U5A6:U71A72_AA 5 0.554 -0.892 35.882 -3.618 -0.179 3.220 63.678 A A 6 7 -8.970 A A 71 41 3.386 -9.425 -2.533 -0.640 AA_A6G7:A41U71_AA 6 5.862 -5.579 62.803 -0.188 2.661 -0.900 -179.514 A A 7 12 -43.183 A A 41 42 -0.910 86.355 -1.635 2.735 AA_G7C12:G42A41_AA 7 151.991 76.005 -169.250 -1.347 -0.855 -3.684 -34.159 A A 12 11 4.829 A A 42 43 -3.834 -2.833 0.150 1.730 AA_C12C11:G43G42_AA 8 0.859 1.465 -34.034 -3.462 0.099 -0.589 -175.977 A A 11 8 -78.904 A A 43 44 0.082 156.438 2.450 2.282 AA_C11A8:U44G43_AA 9 -76.018 -38.342 -96.962 -1.055 1.268 -2.693 175.782 A A 8 37 11.552 A A 44 18 -4.123 23.007 -4.161 -2.584 AA_A8A37:U18U44_AA 10 -165.344 83.017 142.251 -1.215 2.640 -4.229 -53.856 A A 37 36 7.983 A A 18 20 -3.681 -7.073 -2.031 -0.893 AA_A37C36:G20U18_AA 11 -19.271 -21.751 -50.063 0.432 -0.732 -3.324 -36.727 A A 36 35 4.236 A A 20 21 -3.415 -2.662 -0.376 1.477 AA_C36G35:C21G20_AA 12 -3.922 -6.241 -36.431 -2.720 -0.043 -3.203 -28.224 A A 35 34 5.375 A A 21 22 -3.399 -2.617 -0.424 1.973 AA_G35C34:G22C21_AA 13 0.198 0.406 -28.104 -4.663 -0.916 -3.182 -30.009 A A 34 33 -6.876 A A 22 23 -2.980 3.552 0.706 1.764 AA_C34A33:U23G22_AA 14 0.802 1.552 -29.793 -2.716 1.207 -2.150 -28.912 A A 33 32 20.646 A A 23 24 -2.835 -10.080 -0.500 1.607 AA_A33C32:G24U23_AA 15 -3.110 -6.370 -26.958 -4.986 -0.457 3.385 38.956 A A 15 16 -14.071 A A 68 67 3.145 -9.074 0.730 -1.243 AA_A15A16:A67U68_AA 16 14.903 -23.110 34.966 -0.702 0.814 -3.806 134.507 A A 28 54 -2.151 A A 57 30 -3.786 -3.967 4.213 0.119 AA_A28C54:G30A57_AA 17 -1.209 0.656 134.476 0.035 -2.275 0.466 -114.956 A A 54 27 17.142 A A 30 58 1.283 -28.780 -5.480 -4.552 AA_C54U27:A58G30_AA 18 -1.769 -1.054 -112.565 2.785 -3.255 3.161 52.884 A A 31 60 10.141 A A 53 52 3.168 8.984 -2.153 -0.768 AA_G31U60:A52C53_AA 19 -4.325 4.881 52.002 -1.429 2.145 2.813 31.996 A A 60 61 17.354 A A 52 51 3.578 9.425 -0.461 -2.212 AA_U60G61:C51A52_AA 20 -2.060 3.793 30.544 -5.718 0.465 3.217 40.805 A A 61 62 5.633 A A 51 50 3.374 3.920 0.253 -1.649 AA_G61U62:G50C51_AA 21 2.334 -3.353 40.560 -2.802 -0.103 1.774 22.058 A A 62 63 23.530 A A 50 49 2.962 8.705 -0.071 -2.259 AA_U62C63:G49G50_AA 22 4.184 -11.309 19.855 -8.448 1.407 2.823 30.860 A A 63 64 9.145 A A 49 48 3.169 4.841 -0.551 -1.632 AA_C63C64:G48G49_AA 23 2.725 -5.147 30.367 -3.935 1.524 2.168 31.391 A A 64 65 35.382 A A 48 47 3.404 17.965 0.701 -1.246 AA_C64A65:U47G48_AA 24 4.127 -8.127 25.520 -5.493 -0.562 2.879 40.996 A A 65 66 8.420 A A 47 46 2.957 5.872 -0.120 -0.362 AA_A65U66:U46U47_AA 25 -3.526 5.056 40.444 -1.092 -0.174 4.857 48.214 B B 1 2 7.031 B B 77 75 4.977 5.722 -1.406 -1.807 BB_GTP1G2:C75A77_BB 26 -4.980 6.119 47.649 -2.889 1.133 2.395 30.719 B B 2 3 21.193 B B 75 74 3.041 10.922 -0.420 -1.369 BB_G2A3:U74C75_BB 27 -5.840 11.333 28.167 -4.447 -0.204 2.695 32.802 B B 3 4 10.770 B B 74 73 2.987 6.049 -0.183 -1.352 BB_A3C4:G73U74_BB 28 0.154 -0.275 32.254 -3.305 0.348 2.976 30.562 B B 4 5 13.933 B B 73 72 3.462 7.277 0.056 -1.682 BB_C4U5:A72G73_BB 29 0.154 -0.294 29.702 -4.633 -0.076 3.034 35.374 B B 5 6 16.228 B B 72 71 3.567 9.732 0.023 -1.468 BB_U5A6:U71A72_BB 30 -2.759 4.601 33.941 -3.895 -0.458 2.947 60.304 B B 6 7 -9.756 B B 71 41 3.243 -9.740 -2.924 -0.890 BB_A6G7:A41U71_BB 31 8.299 -8.313 59.056 -0.429 3.300 -1.590 -177.826 B B 7 12 -42.940 B B 41 42 -1.574 85.686 -1.317 3.000 BB_G7C12:G42A41_BB 32 151.222 75.782 -138.861 -1.359 -0.908 -3.267 -36.043 B B 12 11 3.215 B B 42 43 -3.364 -1.988 0.655 1.889 BB_C12C11:G43G42_BB 33 0.501 0.809 -35.986 -3.339 0.987 -0.765 -170.388 B B 11 8 -80.166 B B 43 44 0.869 152.587 2.994 2.448 BB_C11A8:U44G43_BB 34 -75.703 -39.772 -12.096 -1.270 1.481 -2.527 -177.079 B B 8 37 10.260 B B 44 18 -0.823 -20.458 5.424 2.335 BB_A8A37:U18U44_BB 35 170.282 85.398 -139.730 -1.203 2.418 -4.009 -51.587 B B 37 36 -3.477 B B 18 20 -3.492 2.986 -2.468 -0.360 BB_A37C36:G20U18_BB 36 -15.044 -17.518 -49.404 0.652 -1.635 -3.348 -41.598 B B 36 35 1.353 B B 20 21 -3.390 -0.961 0.356 1.855 BB_C36G35:C21G20_BB 37 0.019 0.026 -41.587 -2.717 0.499 -2.798 -23.893 B B 35 34 12.644 B B 21 22 -3.350 -5.192 -0.597 2.307 BB_G35C34:G22C21_BB 38 -0.919 -2.237 -23.312 -7.183 -1.158 -3.110 -28.060 B B 34 33 5.900 B B 22 23 -3.274 -2.852 -0.338 1.650 BB_C34A33:U23G22_BB 39 -2.563 -5.301 -27.802 -4.063 -0.104 -2.708 -29.502 B B 33 32 8.710 B B 23 24 -3.008 -4.414 0.185 1.654 BB_A33C32:G24U23_BB 40 -2.465 -4.864 -29.075 -4.075 0.825 0.530 -165.974 B B 13 15 -65.352 B B 69 68 -0.845 123.225 1.847 -2.788 BB_G13A15:U68G69_BB 41 110.004 58.340 -37.549 1.489 0.855 3.229 34.970 B B 15 16 -6.858 B B 68 67 3.198 -4.081 0.068 -0.971 BB_A15A16:A67U68_BB 42 7.578 -12.734 33.926 -1.001 1.028 -3.529 133.466 B B 28 54 -5.494 B B 57 30 -3.507 -10.092 4.094 0.162 BB_A28C54:G30A57_BB 43 -1.156 0.630 133.272 0.016 -2.220 -5.516 177.816 B B 54 58 -65.977 B B 30 27 -5.016 -131.864 -2.048 5.027 BB_C54A58:U27G30_BB 44 87.243 -43.651 168.477 2.297 0.881 3.350 54.741 B B 31 60 8.318 B B 53 52 3.269 7.619 -2.577 -0.688 BB_G31U60:A52C53_BB 45 -4.762 5.199 54.055 -1.214 2.511 3.284 27.276 B B 60 61 9.262 B B 52 51 3.599 4.339 -0.481 -1.936 BB_U60G61:C51A52_BB 46 -3.341 7.131 26.730 -5.256 0.133 2.921 39.464 B B 61 62 6.885 B B 51 50 3.111 4.639 0.104 -1.511 BB_G61U62:G50C51_BB 47 0.403 -0.598 39.199 -2.744 -0.110 2.956 23.852 B B 62 63 8.505 B B 50 49 3.286 3.483 0.475 -2.273 BB_U62C63:G49G50_BB 48 4.403 -10.752 23.191 -6.601 0.246 2.478 29.397 B B 63 64 19.499 B B 49 48 3.302 9.717 -0.745 -1.995 BB_C63C64:G48G49_BB 49 -0.057 0.113 27.778 -5.828 1.457 2.648 26.815 B B 64 65 7.757 B B 48 47 2.997 3.572 0.409 -1.701 BB_C64A65:U47G48_BB 50 -4.271 9.275 26.241 -4.473 -1.844 2.775 43.110 B B 65 66 9.854 B B 47 46 2.956 7.207 0.652 -1.075 BB_A65U66:U46U47_BB 51 2.188 -2.992 42.478 -2.089 -0.697 repository Initial release 1 0 2026-05-13 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35 GM152029 robert.batey@colorado.edu 0000-0002-1384-6625 Robert Batey principal investigator/group leader N RCSB Y RCSB 2026-03-26 REL REL SR STRONTIUM ION HOH water N N 4FE5 PDB experimental model SR 101 2 SR SR 101 A SR 201 2 SR SR 102 A SR 1 2 SR SR 103 A SR 2 2 SR SR 104 A SR 3 2 SR SR 105 A SR 4 2 SR SR 106 A SR 5 2 SR SR 107 A SR 6 2 SR SR 108 A SR 7 2 SR SR 109 A SR 18 2 SR SR 110 A SR 28 2 SR SR 111 A SR 29 2 SR SR 112 A SR 30 2 SR SR 113 A SR 31 2 SR SR 114 A SR 9 2 SR SR 101 B SR 10 2 SR SR 102 B SR 11 2 SR SR 103 B SR 12 2 SR SR 104 B SR 13 2 SR SR 105 B SR 14 2 SR SR 106 B SR 15 2 SR SR 107 B SR 16 2 SR SR 108 B SR 24 2 SR SR 109 B SR 25 2 SR SR 110 B SR 26 2 SR SR 111 B SR 27 2 SR SR 112 B SR 32 2 SR SR 113 B HOH 18 3 HOH HOH 201 A HOH 4 3 HOH HOH 202 A HOH 7 3 HOH HOH 203 A HOH 3 3 HOH HOH 204 A HOH 14 3 HOH HOH 205 A HOH 15 3 HOH HOH 206 A HOH 17 3 HOH HOH 207 A HOH 9 3 HOH HOH 208 A HOH 16 3 HOH HOH 209 A HOH 5 3 HOH HOH 210 A HOH 13 3 HOH HOH 211 A HOH 11 3 HOH HOH 201 B HOH 1 3 HOH HOH 202 B HOH 10 3 HOH HOH 203 B HOH 8 3 HOH HOH 204 B HOH 6 3 HOH HOH 205 B HOH 2 3 HOH HOH 206 B HOH 12 3 HOH HOH 207 B GTP 1 n 1 GTP 1 A G 2 n 2 G 2 A A 3 n 3 A 3 A C 4 n 4 C 4 A U 5 n 5 U 5 A A 6 n 6 A 6 A G 7 n 7 G 7 A A 8 n 8 A 8 A C 9 n 9 C 9 A U 10 n 10 U 10 A C 11 n 11 C 11 A C 12 n 12 C 12 A G 13 n 13 G 13 A U 14 n 14 U 14 A A 15 n 15 A 15 A A 16 n 16 A 16 A U 17 n 17 U 17 A U 18 n 18 U 18 A C 19 n 19 C 19 A G 20 n 20 G 20 A C 21 n 21 C 21 A G 22 n 22 G 22 A U 23 n 23 U 23 A G 24 n 24 G 24 A G 25 n 25 G 25 A A 26 n 26 A 26 A U 27 n 27 U 27 A A 28 n 28 A 28 A U 29 n 29 U 29 A G 30 n 30 G 30 A G 31 n 31 G 31 A C 32 n 32 C 32 A A 33 n 33 A 33 A C 34 n 34 C 34 A G 35 n 35 G 35 A C 36 n 36 C 36 A A 37 n 37 A 37 A G 38 n 38 G 38 A U 39 n 39 U 39 A A 40 n 40 A 40 A A 41 n 41 A 41 A G 42 n 42 G 42 A G 43 n 43 G 43 A U 44 n 44 U 44 A A 45 n 45 A 45 A U 46 n 46 U 46 A U 47 n 47 U 47 A G 48 n 48 G 48 A G 49 n 49 G 49 A G 50 n 50 G 50 A C 51 n 51 C 51 A A 52 n 52 A 52 A C 53 n 53 C 53 A C 54 n 54 C 54 A G 55 n 55 G 55 A U 56 n 56 U 56 A A 57 n 57 A 57 A A 58 n 58 A 58 A A 59 n 59 A 59 A U 60 n 60 U 60 A G 61 n 61 G 61 A U 62 n 62 U 62 A C 63 n 63 C 63 A C 64 n 64 C 64 A A 65 n 65 A 65 A U 66 n 66 U 66 A A 67 n 67 A 67 A U 68 n 68 U 68 A G 69 n 69 G 69 A U 70 n 70 U 70 A U 71 n 71 U 71 A A 72 n 72 A 72 A G 73 n 73 G 73 A U 74 n 74 U 74 A C 75 n 75 C 75 A C 76 n 76 C 76 A A 77 n 77 A 77 A GTP 1 n 1 GTP 1 B G 2 n 2 G 2 B A 3 n 3 A 3 B C 4 n 4 C 4 B U 5 n 5 U 5 B A 6 n 6 A 6 B G 7 n 7 G 7 B A 8 n 8 A 8 B C 9 n 9 C 9 B U 10 n 10 U 10 B C 11 n 11 C 11 B C 12 n 12 C 12 B G 13 n 13 G 13 B U 14 n 14 U 14 B A 15 n 15 A 15 B A 16 n 16 A 16 B U 17 n 17 U 17 B U 18 n 18 U 18 B C 19 n 19 C 19 B G 20 n 20 G 20 B C 21 n 21 C 21 B G 22 n 22 G 22 B U 23 n 23 U 23 B G 24 n 24 G 24 B G 25 n 25 G 25 B A 26 n 26 A 26 B U 27 n 27 U 27 B A 28 n 28 A 28 B U 29 n 29 U 29 B G 30 n 30 G 30 B G 31 n 31 G 31 B C 32 n 32 C 32 B A 33 n 33 A 33 B C 34 n 34 C 34 B G 35 n 35 G 35 B C 36 n 36 C 36 B A 37 n 37 A 37 B G 38 n 38 G 38 B U 39 n 39 U 39 B A 40 n 40 A 40 B A 41 n 41 A 41 B G 42 n 42 G 42 B G 43 n 43 G 43 B U 44 n 44 U 44 B A 45 n 45 A 45 B U 46 n 46 U 46 B U 47 n 47 U 47 B G 48 n 48 G 48 B G 49 n 49 G 49 B G 50 n 50 G 50 B C 51 n 51 C 51 B A 52 n 52 A 52 B C 53 n 53 C 53 B C 54 n 54 C 54 B G 55 n 55 G 55 B U 56 n 56 U 56 B A 57 n 57 A 57 B A 58 n 58 A 58 B A 59 n 59 A 59 B U 60 n 60 U 60 B G 61 n 61 G 61 B U 62 n 62 U 62 B C 63 n 63 C 63 B C 64 n 64 C 64 B A 65 n 65 A 65 B U 66 n 66 U 66 B A 67 n 67 A 67 B U 68 n 68 U 68 B G 69 n 69 G 69 B U 70 n 70 U 70 B U 71 n 71 U 71 B A 72 n 72 A 72 B G 73 n 73 G 73 B U 74 n 74 U 74 B C 75 n 75 C 75 B C 76 n 76 C 76 B A 77 n 77 A 77 B author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric isothermal titration calorimetry isothermal titration calorimetry A GTP 1 A O2B GTP 1 1_555 A SR 110 L SR SR 1_555 A GTP 1 A N7 GTP 1 1_555 74.6 A GTP 1 A O2B GTP 1 1_555 A SR 110 L SR SR 1_555 A GTP 1 A O6 GTP 1 1_555 129.2 A GTP 1 A N7 GTP 1 1_555 A SR 110 L SR SR 1_555 A GTP 1 A O6 GTP 1 1_555 62.7 A GTP 1 A O2B GTP 1 1_555 A SR 110 L SR SR 1_555 A HOH 208 DA O HOH 1_555 70.3 A GTP 1 A N7 GTP 1 1_555 A SR 110 L SR SR 1_555 A HOH 208 DA O HOH 1_555 69.9 A GTP 1 A O6 GTP 1 1_555 A SR 110 L SR SR 1_555 A HOH 208 DA O HOH 1_555 70.1 A GTP 1 A O1A GTP 1 1_555 A SR 113 O SR SR 1_555 A GTP 1 A O2A GTP 1 1_555 52.3 A A 8 A OP1 A 8 1_555 A SR 102 D SR SR 1_555 A G 43 A O6 G 43 1_555 100.2 A A 8 A OP1 A 8 1_555 A SR 102 D SR SR 1_555 A HOH 203 DA O HOH 1_555 57.4 A G 43 A O6 G 43 1_555 A SR 102 D SR SR 1_555 A HOH 203 DA O HOH 1_555 145.0 A C 9 A O2 C 9 1_555 A SR 108 J SR SR 1_545 A A 26 A OP1 A 26 1_555 110.6 A U 23 A O4 U 23 1_555 A SR 106 H SR SR 1_555 A U 60 A OP2 U 60 1_555 124.4 A U 29 A OP2 U 29 1_555 A SR 114 P SR SR 1_555 A HOH 210 DA O HOH 1_555 84.1 A G 38 A O6 G 38 1_555 A SR 103 E SR SR 1_555 A HOH 211 DA O HOH 1_555 155.0 A A 59 A OP2 A 59 1_555 A SR 107 I SR SR 1_555 A HOH 202 DA O HOH 1_555 140.4 A U 66 A O4 U 66 1_555 A SR 104 F SR SR 1_555 A HOH 201 DA O HOH 1_555 47.6 B GTP 1 B O2B GTP 1 1_555 B SR 109 Y SR SR 1_555 B GTP 1 B O6 GTP 1 1_555 107.9 B GTP 1 B O2B GTP 1 1_555 B SR 109 Y SR SR 1_555 B HOH 202 EA O HOH 1_555 78.8 B GTP 1 B O6 GTP 1 1_555 B SR 109 Y SR SR 1_555 B HOH 202 EA O HOH 1_555 52.3 B GTP 1 B O2B GTP 1 1_555 B SR 109 Y SR SR 1_555 B HOH 202 EA O HOH 2_555 78.8 B GTP 1 B O6 GTP 1 1_555 B SR 109 Y SR SR 1_555 B HOH 202 EA O HOH 2_555 52.3 B HOH 202 EA O HOH 1_555 B SR 109 Y SR SR 1_555 B HOH 202 EA O HOH 2_555 0.0 B A 8 B OP1 A 8 1_555 B SR 105 U SR SR 1_555 B G 43 B O6 G 43 1_555 103.3 B A 8 B OP1 A 8 1_555 B SR 105 U SR SR 1_555 B HOH 203 EA O HOH 1_555 161.5 B G 43 B O6 G 43 1_555 B SR 105 U SR SR 1_555 B HOH 203 EA O HOH 1_555 73.4 B C 12 B OP2 C 12 1_555 B SR 107 W SR SR 1_555 B HOH 201 EA O HOH 1_555 94.7 B U 56 B O2' U 56 1_555 B SR 101 Q SR SR 1_555 B U 56 B O2 U 56 1_555 66.1 B U 66 B O4 U 66 1_555 B SR 104 T SR SR 1_555 B HOH 206 EA O HOH 1_555 73.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B HOH 202 EA HOH 1 -11.82 1.90 104.00 92.18 A A A O3' P O5' GTP G G 1 2 2 Y 1 13.65 1.10 110.50 124.15 A A A O3' P OP2 GTP G G 1 2 2 Y 1 -17.04 1.20 119.70 102.66 B B B C3' O3' P GTP GTP G 1 1 2 Y 1 14.41 1.90 104.00 118.41 B B B O3' P O5' GTP G G 1 2 2 Y 1 B B N7 N6 GTP A 1 77 1.73 1_555 2_555 1 B B C8 C6 GTP A 1 77 1.92 1_555 2_555 61.77 0.2480 0.2015 0.2036 2.93 43.83 475 10392 10867 4.37 99.05 0.1915 1 FREE R-VALUE 1.34 MOLECULAR REPLACEMENT 27.1561 0.9000 1.1100 CDL v1.2 FLAT BULK SOLVENT MODEL 2.93 43.83 18 3349 27 3304 0 0.0018 3692 0.5776 5748 0.0285 768 0.0028 154 16.3319 1846 0.3088 0.2776 3.34 139 3377 97.40 0.2605 0.2038 4.21 167 3437 99.83 0.2194 0.1767 43.83 169 3578 99.89 2.93 43.94 12CJ 10888 0.998 0.129 0.052 0.139 1 10.5 7.2 100 1.380 2.93 3.01 802 0.746 0.544 1.485 1 refinement PHENIX 1.14_3260 data reduction DIALS data scaling DIALS phasing PHENIX N Apo structure of dopamine-binding aptamer, DGR-1B 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 3 N N covale 1.558 both A GTP 1 A O3' GTP 1 1_555 A G 2 A P G 2 1_555 covale 1.560 both B GTP 1 B O3' GTP 1 1_555 B G 2 B P G 2 1_555 covale 1.425 none B GTP 1 B C8 GTP 1 1_555 B A 77 B N6 A 77 2_555 metalc 2.556 A GTP 1 A O2B GTP 1 1_555 A SR 110 L SR SR 1_555 metalc 2.884 A GTP 1 A N7 GTP 1 1_555 A SR 110 L SR SR 1_555 metalc 2.729 A GTP 1 A O6 GTP 1 1_555 A SR 110 L SR SR 1_555 metalc 2.858 A GTP 1 A O1A GTP 1 1_555 A SR 113 O SR SR 1_555 metalc 2.775 A GTP 1 A O2A GTP 1 1_555 A SR 113 O SR SR 1_555 metalc 2.544 A A 8 A OP1 A 8 1_555 A SR 102 D SR SR 1_555 metalc 2.672 A C 9 A O2 C 9 1_555 A SR 108 J SR SR 1_545 metalc 2.756 A U 10 A O2 U 10 1_555 A SR 109 K SR SR 1_545 metalc 2.856 A C 12 A OP2 C 12 1_555 A SR 101 C SR SR 1_555 metalc 2.922 A U 23 A O4 U 23 1_555 A SR 106 H SR SR 1_555 metalc 2.692 A A 26 A OP1 A 26 1_555 A SR 108 J SR SR 1_555 metalc 2.649 A U 29 A OP2 U 29 1_555 A SR 114 P SR SR 1_555 metalc 2.700 A G 38 A O6 G 38 1_555 A SR 103 E SR SR 1_555 metalc 2.791 A G 43 A O6 G 43 1_555 A SR 102 D SR SR 1_555 metalc 2.710 A G 49 A O6 G 49 1_555 A SR 105 G SR SR 1_555 metalc 2.407 A A 59 A OP2 A 59 1_555 A SR 107 I SR SR 1_555 metalc 2.634 A U 60 A OP2 U 60 1_555 A SR 106 H SR SR 1_555 metalc 2.948 A U 66 A O4 U 66 1_555 A SR 104 F SR SR 1_555 metalc 2.684 A SR 102 D SR SR 1_555 A HOH 203 DA O HOH 1_555 metalc 2.531 A SR 103 E SR SR 1_555 A HOH 211 DA O HOH 1_555 metalc 2.733 A SR 104 F SR SR 1_555 A HOH 201 DA O HOH 1_555 metalc 2.483 A SR 107 I SR SR 1_555 A HOH 202 DA O HOH 1_555 metalc 2.764 A SR 110 L SR SR 1_555 A HOH 208 DA O HOH 1_555 metalc 2.602 A SR 112 N SR SR 1_555 A HOH 204 DA O HOH 1_555 metalc 2.588 A SR 114 P SR SR 1_555 A HOH 210 DA O HOH 1_555 metalc 2.706 B GTP 1 B O2B GTP 1 1_555 B SR 109 Y SR SR 1_555 metalc 2.626 B GTP 1 B O6 GTP 1 1_555 B SR 109 Y SR SR 1_555 metalc 2.488 B A 8 B OP1 A 8 1_555 B SR 105 U SR SR 1_555 metalc 2.705 B C 12 B OP2 C 12 1_555 B SR 107 W SR SR 1_555 metalc 2.488 B U 29 B OP2 U 29 1_555 B SR 113 CA SR SR 1_555 metalc 2.739 B G 38 B O6 G 38 1_555 B SR 106 V SR SR 1_555 metalc 2.858 B G 43 B O6 G 43 1_555 B SR 105 U SR SR 1_555 metalc 2.705 B U 56 B O2' U 56 1_555 B SR 101 Q SR SR 1_555 metalc 2.738 B U 56 B O2 U 56 1_555 B SR 101 Q SR SR 1_555 metalc 2.585 B U 66 B O4 U 66 1_555 B SR 104 T SR SR 1_555 metalc 2.571 B SR 104 T SR SR 1_555 B HOH 206 EA O HOH 1_555 metalc 2.582 B SR 105 U SR SR 1_555 B HOH 203 EA O HOH 1_555 metalc 2.636 B SR 107 W SR SR 1_555 B HOH 201 EA O HOH 1_555 metalc 2.756 B SR 109 Y SR SR 1_555 B HOH 202 EA O HOH 1_555 metalc 2.756 B SR 109 Y SR SR 1_555 B HOH 202 EA O HOH 2_555 hydrog WATSON-CRICK A GTP 1 A N1 GTP 1 1_555 A C 76 A N3 C 76 1_555 hydrog WATSON-CRICK A GTP 1 A N2 GTP 1 1_555 A C 76 A O2 C 76 1_555 hydrog WATSON-CRICK A GTP 1 A O6 GTP 1 1_555 A C 76 A N4 C 76 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 A C 75 A N3 C 75 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 A C 75 A O2 C 75 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 A C 75 A N4 C 75 1_555 hydrog WATSON-CRICK A A 3 A N1 A 3 1_555 A U 74 A N3 U 74 1_555 hydrog WATSON-CRICK A A 3 A N6 A 3 1_555 A U 74 A O4 U 74 1_555 hydrog WATSON-CRICK A C 4 A N3 C 4 1_555 A G 73 A N1 G 73 1_555 hydrog WATSON-CRICK A C 4 A N4 C 4 1_555 A G 73 A O6 G 73 1_555 hydrog WATSON-CRICK A C 4 A O2 C 4 1_555 A G 73 A N2 G 73 1_555 hydrog WATSON-CRICK A U 5 A N3 U 5 1_555 A A 72 A N1 A 72 1_555 hydrog WATSON-CRICK A U 5 A O4 U 5 1_555 A A 72 A N6 A 72 1_555 hydrog WATSON-CRICK A A 6 A N1 A 6 1_555 A U 71 A N3 U 71 1_555 hydrog WATSON-CRICK A A 6 A N6 A 6 1_555 A U 71 A O4 U 71 1_555 hydrog TYPE_7_PAIR A G 7 A N1 G 7 1_555 A G 13 A N7 G 13 1_555 hydrog TYPE_7_PAIR A G 7 A N2 G 7 1_555 A G 13 A O6 G 13 1_555 hydrog TYPE_10_PAIR A G 7 A N2 G 7 1_555 A A 41 A N1 A 41 1_555 hydrog TYPE_10_PAIR A G 7 A N3 G 7 1_555 A A 41 A N6 A 41 1_555 hydrog REVERSED HOOGSTEEN A A 8 A N6 A 8 1_555 A U 17 A O2 U 17 1_555 hydrog REVERSED HOOGSTEEN A A 8 A N7 A 8 1_555 A U 17 A N3 U 17 1_555 hydrog REVERSED WATSON-CRICK A A 8 A N1 A 8 1_555 A U 44 A N3 U 44 1_555 hydrog REVERSED WATSON-CRICK A A 8 A N6 A 8 1_555 A U 44 A O2 U 44 1_555 hydrog WATSON-CRICK A C 11 A N3 C 11 1_555 A G 43 A N1 G 43 1_555 hydrog WATSON-CRICK A C 11 A N4 C 11 1_555 A G 43 A O6 G 43 1_555 hydrog WATSON-CRICK A C 11 A O2 C 11 1_555 A G 43 A N2 G 43 1_555 hydrog WATSON-CRICK A C 12 A N3 C 12 1_555 A G 42 A N1 G 42 1_555 hydrog WATSON-CRICK A C 12 A N4 C 12 1_555 A G 42 A O6 G 42 1_555 hydrog WATSON-CRICK A C 12 A O2 C 12 1_555 A G 42 A N2 G 42 1_555 hydrog REVERSED HOOGSTEEN A A 15 A N6 A 15 1_555 A U 68 A O2 U 68 1_555 hydrog REVERSED HOOGSTEEN A A 15 A N7 A 15 1_555 A U 68 A N3 U 68 1_555 hydrog A-G MISPAIR A A 16 A N3 A 16 1_555 A G 43 A N2 G 43 1_555 hydrog TYPE_5_PAIR A A 16 A N6 A 16 1_555 A A 67 A N1 A 67 1_555 hydrog TYPE_5_PAIR A A 16 A N7 A 16 1_555 A A 67 A N6 A 67 1_555 hydrog WATSON-CRICK A U 18 A N3 U 18 1_555 A A 37 A N1 A 37 1_555 hydrog WATSON-CRICK A U 18 A O4 U 18 1_555 A A 37 A N6 A 37 1_555 hydrog WATSON-CRICK A G 20 A N1 G 20 1_555 A C 36 A N3 C 36 1_555 hydrog WATSON-CRICK A G 20 A N2 G 20 1_555 A C 36 A O2 C 36 1_555 hydrog WATSON-CRICK A G 20 A O6 G 20 1_555 A C 36 A N4 C 36 1_555 hydrog WATSON-CRICK A C 21 A N3 C 21 1_555 A G 35 A N1 G 35 1_555 hydrog WATSON-CRICK A C 21 A N4 C 21 1_555 A G 35 A O6 G 35 1_555 hydrog WATSON-CRICK A C 21 A O2 C 21 1_555 A G 35 A N2 G 35 1_555 hydrog WATSON-CRICK A G 22 A N1 G 22 1_555 A C 34 A N3 C 34 1_555 hydrog WATSON-CRICK A G 22 A N2 G 22 1_555 A C 34 A O2 C 34 1_555 hydrog WATSON-CRICK A G 22 A O6 G 22 1_555 A C 34 A N4 C 34 1_555 hydrog WATSON-CRICK A U 23 A N3 U 23 1_555 A A 33 A N1 A 33 1_555 hydrog WATSON-CRICK A U 23 A O4 U 23 1_555 A A 33 A N6 A 33 1_555 hydrog WATSON-CRICK A G 24 A N1 G 24 1_555 A C 32 A N3 C 32 1_555 hydrog WATSON-CRICK A G 24 A N2 G 24 1_555 A C 32 A O2 C 32 1_555 hydrog WATSON-CRICK A G 24 A O6 G 24 1_555 A C 32 A N4 C 32 1_555 hydrog TYPE_5_PAIR A A 26 A N1 A 26 1_555 A A 59 A N6 A 59 1_555 hydrog TYPE_5_PAIR A A 26 A N6 A 26 1_555 A A 59 A N7 A 59 1_555 hydrog U-G MISPAIR A U 27 A O2 U 27 1_555 A G 30 A N2 G 30 1_555 hydrog REVERSED HOOGSTEEN A U 27 A N3 U 27 1_555 A A 58 A N7 A 58 1_555 hydrog REVERSED HOOGSTEEN A U 27 A O2 U 27 1_555 A A 58 A N6 A 58 1_555 hydrog TYPE_5_PAIR A A 28 A N6 A 28 1_555 A A 57 A N1 A 57 1_555 hydrog TYPE_5_PAIR A A 28 A N7 A 28 1_555 A A 57 A N6 A 57 1_555 hydrog WATSON-CRICK A G 30 A N1 G 30 1_555 A C 54 A N3 C 54 1_555 hydrog WATSON-CRICK A G 30 A N2 G 30 1_555 A C 54 A O2 C 54 1_555 hydrog WATSON-CRICK A G 30 A O6 G 30 1_555 A C 54 A N4 C 54 1_555 hydrog WATSON-CRICK A G 31 A N1 G 31 1_555 A C 53 A N3 C 53 1_555 hydrog WATSON-CRICK A G 31 A N2 G 31 1_555 A C 53 A O2 C 53 1_555 hydrog WATSON-CRICK A G 31 A O6 G 31 1_555 A C 53 A N4 C 53 1_555 hydrog TYPE_10_PAIR A G 31 A N2 G 31 1_555 A A 59 A N1 A 59 1_555 hydrog TYPE_10_PAIR A G 31 A N3 G 31 1_555 A A 59 A N6 A 59 1_555 hydrog G-U MISPAIR A G 38 A N2 G 38 1_555 A U 44 A O4 U 44 1_555 hydrog A-U PAIR A A 40 A N6 A 40 1_555 A U 71 A O2 U 71 1_555 hydrog WATSON-CRICK A A 45 A N1 A 45 1_555 A U 66 A N3 U 66 1_555 hydrog WATSON-CRICK A A 45 A N6 A 45 1_555 A U 66 A O4 U 66 1_555 hydrog TYPE_16_PAIR A U 46 A N3 U 46 1_555 A U 66 A O2 U 66 1_555 hydrog TYPE_16_PAIR A U 46 A O4 U 46 1_555 A U 66 A N3 U 66 1_555 hydrog WATSON-CRICK A U 47 A N3 U 47 1_555 A A 65 A N1 A 65 1_555 hydrog WATSON-CRICK A U 47 A O4 U 47 1_555 A A 65 A N6 A 65 1_555 hydrog WATSON-CRICK A G 48 A N1 G 48 1_555 A C 64 A N3 C 64 1_555 hydrog WATSON-CRICK A G 48 A N2 G 48 1_555 A C 64 A O2 C 64 1_555 hydrog WATSON-CRICK A G 48 A O6 G 48 1_555 A C 64 A N4 C 64 1_555 hydrog WATSON-CRICK A G 49 A N1 G 49 1_555 A C 63 A N3 C 63 1_555 hydrog WATSON-CRICK A G 49 A N2 G 49 1_555 A C 63 A O2 C 63 1_555 hydrog WATSON-CRICK A G 49 A O6 G 49 1_555 A C 63 A N4 C 63 1_555 hydrog TYPE_28_PAIR A G 50 A N1 G 50 1_555 A U 62 A O2 U 62 1_555 hydrog TYPE_28_PAIR A G 50 A O6 G 50 1_555 A U 62 A N3 U 62 1_555 hydrog WATSON-CRICK A C 51 A N3 C 51 1_555 A G 61 A N1 G 61 1_555 hydrog WATSON-CRICK A C 51 A N4 C 51 1_555 A G 61 A O6 G 61 1_555 hydrog WATSON-CRICK A C 51 A O2 C 51 1_555 A G 61 A N2 G 61 1_555 hydrog WATSON-CRICK A A 52 A N1 A 52 1_555 A U 60 A N3 U 60 1_555 hydrog WATSON-CRICK A A 52 A N6 A 52 1_555 A U 60 A O4 U 60 1_555 hydrog C-A MISPAIR A C 54 A O2 C 54 1_555 A A 58 A N6 A 58 1_555 hydrog TYPE_8_PAIR B GTP 1 B N1 GTP 1 1_555 B A 77 B N1 A 77 1_555 hydrog TYPE_8_PAIR B GTP 1 B O6 GTP 1 1_555 B A 77 B N6 A 77 1_555 hydrog WATSON-CRICK B G 2 B N1 G 2 1_555 B C 75 B N3 C 75 1_555 hydrog WATSON-CRICK B G 2 B N2 G 2 1_555 B C 75 B O2 C 75 1_555 hydrog WATSON-CRICK B G 2 B O6 G 2 1_555 B C 75 B N4 C 75 1_555 hydrog WATSON-CRICK B A 3 B N1 A 3 1_555 B U 74 B N3 U 74 1_555 hydrog WATSON-CRICK B A 3 B N6 A 3 1_555 B U 74 B O4 U 74 1_555 hydrog WATSON-CRICK B C 4 B N3 C 4 1_555 B G 73 B N1 G 73 1_555 hydrog WATSON-CRICK B C 4 B N4 C 4 1_555 B G 73 B O6 G 73 1_555 hydrog WATSON-CRICK B C 4 B O2 C 4 1_555 B G 73 B N2 G 73 1_555 hydrog WATSON-CRICK B U 5 B N3 U 5 1_555 B A 72 B N1 A 72 1_555 hydrog WATSON-CRICK B U 5 B O4 U 5 1_555 B A 72 B N6 A 72 1_555 hydrog WATSON-CRICK B A 6 B N1 A 6 1_555 B U 71 B N3 U 71 1_555 hydrog WATSON-CRICK B A 6 B N6 A 6 1_555 B U 71 B O4 U 71 1_555 hydrog TYPE_7_PAIR B G 7 B N1 G 7 1_555 B G 13 B N7 G 13 1_555 hydrog TYPE_7_PAIR B G 7 B N2 G 7 1_555 B G 13 B O6 G 13 1_555 hydrog TYPE_10_PAIR B G 7 B N2 G 7 1_555 B A 41 B N1 A 41 1_555 hydrog TYPE_10_PAIR B G 7 B N3 G 7 1_555 B A 41 B N6 A 41 1_555 hydrog REVERSED HOOGSTEEN B A 8 B N6 A 8 1_555 B U 17 B O2 U 17 1_555 hydrog REVERSED HOOGSTEEN B A 8 B N7 A 8 1_555 B U 17 B N3 U 17 1_555 hydrog REVERSED WATSON-CRICK B A 8 B N1 A 8 1_555 B U 44 B N3 U 44 1_555 hydrog REVERSED WATSON-CRICK B A 8 B N6 A 8 1_555 B U 44 B O2 U 44 1_555 hydrog WATSON-CRICK B C 11 B N3 C 11 1_555 B G 43 B N1 G 43 1_555 hydrog WATSON-CRICK B C 11 B N4 C 11 1_555 B G 43 B O6 G 43 1_555 hydrog WATSON-CRICK B C 11 B O2 C 11 1_555 B G 43 B N2 G 43 1_555 hydrog WATSON-CRICK B C 12 B N3 C 12 1_555 B G 42 B N1 G 42 1_555 hydrog WATSON-CRICK B C 12 B N4 C 12 1_555 B G 42 B O6 G 42 1_555 hydrog WATSON-CRICK B C 12 B O2 C 12 1_555 B G 42 B N2 G 42 1_555 hydrog G-G MISPAIR B G 13 B O6 G 13 1_555 B G 42 B N2 G 42 1_555 hydrog G-G MISPAIR B G 13 B N3 G 13 1_555 B G 69 B N2 G 69 1_555 hydrog REVERSED HOOGSTEEN B A 15 B N6 A 15 1_555 B U 68 B O2 U 68 1_555 hydrog REVERSED HOOGSTEEN B A 15 B N7 A 15 1_555 B U 68 B N3 U 68 1_555 hydrog A-G MISPAIR B A 16 B N3 A 16 1_555 B G 43 B N2 G 43 1_555 hydrog TYPE_5_PAIR B A 16 B N6 A 16 1_555 B A 67 B N1 A 67 1_555 hydrog TYPE_5_PAIR B A 16 B N7 A 16 1_555 B A 67 B N6 A 67 1_555 hydrog WATSON-CRICK B U 18 B N3 U 18 1_555 B A 37 B N1 A 37 1_555 hydrog WATSON-CRICK B U 18 B O4 U 18 1_555 B A 37 B N6 A 37 1_555 hydrog WATSON-CRICK B G 20 B N1 G 20 1_555 B C 36 B N3 C 36 1_555 hydrog WATSON-CRICK B G 20 B N2 G 20 1_555 B C 36 B O2 C 36 1_555 hydrog WATSON-CRICK B G 20 B O6 G 20 1_555 B C 36 B N4 C 36 1_555 hydrog WATSON-CRICK B C 21 B N3 C 21 1_555 B G 35 B N1 G 35 1_555 hydrog WATSON-CRICK B C 21 B N4 C 21 1_555 B G 35 B O6 G 35 1_555 hydrog WATSON-CRICK B C 21 B O2 C 21 1_555 B G 35 B N2 G 35 1_555 hydrog WATSON-CRICK B G 22 B N1 G 22 1_555 B C 34 B N3 C 34 1_555 hydrog WATSON-CRICK B G 22 B N2 G 22 1_555 B C 34 B O2 C 34 1_555 hydrog WATSON-CRICK B G 22 B O6 G 22 1_555 B C 34 B N4 C 34 1_555 hydrog WATSON-CRICK B U 23 B N3 U 23 1_555 B A 33 B N1 A 33 1_555 hydrog WATSON-CRICK B U 23 B O4 U 23 1_555 B A 33 B N6 A 33 1_555 hydrog WATSON-CRICK B G 24 B N1 G 24 1_555 B C 32 B N3 C 32 1_555 hydrog WATSON-CRICK B G 24 B N2 G 24 1_555 B C 32 B O2 C 32 1_555 hydrog WATSON-CRICK B G 24 B O6 G 24 1_555 B C 32 B N4 C 32 1_555 hydrog TYPE_5_PAIR B A 26 B N1 A 26 1_555 B A 59 B N6 A 59 1_555 hydrog TYPE_5_PAIR B A 26 B N6 A 26 1_555 B A 59 B N7 A 59 1_555 hydrog U-G MISPAIR B U 27 B O2 U 27 1_555 B G 30 B N2 G 30 1_555 hydrog REVERSED HOOGSTEEN B U 27 B N3 U 27 1_555 B A 58 B N7 A 58 1_555 hydrog REVERSED HOOGSTEEN B U 27 B O2 U 27 1_555 B A 58 B N6 A 58 1_555 hydrog TYPE_5_PAIR B A 28 B N6 A 28 1_555 B A 57 B N1 A 57 1_555 hydrog TYPE_5_PAIR B A 28 B N7 A 28 1_555 B A 57 B N6 A 57 1_555 hydrog WATSON-CRICK B G 30 B N1 G 30 1_555 B C 54 B N3 C 54 1_555 hydrog WATSON-CRICK B G 30 B N2 G 30 1_555 B C 54 B O2 C 54 1_555 hydrog WATSON-CRICK B G 30 B O6 G 30 1_555 B C 54 B N4 C 54 1_555 hydrog WATSON-CRICK B G 31 B N1 G 31 1_555 B C 53 B N3 C 53 1_555 hydrog WATSON-CRICK B G 31 B N2 G 31 1_555 B C 53 B O2 C 53 1_555 hydrog WATSON-CRICK B G 31 B O6 G 31 1_555 B C 53 B N4 C 53 1_555 hydrog TYPE_10_PAIR B G 31 B N2 G 31 1_555 B A 59 B N1 A 59 1_555 hydrog TYPE_10_PAIR B G 31 B N3 G 31 1_555 B A 59 B N6 A 59 1_555 hydrog G-U MISPAIR B G 38 B N2 G 38 1_555 B U 44 B O4 U 44 1_555 hydrog A-U PAIR B A 40 B N6 A 40 1_555 B U 71 B O2 U 71 1_555 hydrog TYPE_16_PAIR B U 46 B N3 U 46 1_555 B U 66 B O2 U 66 1_555 hydrog TYPE_16_PAIR B U 46 B O4 U 46 1_555 B U 66 B N3 U 66 1_555 hydrog WATSON-CRICK B U 47 B N3 U 47 1_555 B A 65 B N1 A 65 1_555 hydrog WATSON-CRICK B U 47 B O4 U 47 1_555 B A 65 B N6 A 65 1_555 hydrog WATSON-CRICK B G 48 B N1 G 48 1_555 B C 64 B N3 C 64 1_555 hydrog WATSON-CRICK B G 48 B N2 G 48 1_555 B C 64 B O2 C 64 1_555 hydrog WATSON-CRICK B G 48 B O6 G 48 1_555 B C 64 B N4 C 64 1_555 hydrog WATSON-CRICK B G 49 B N1 G 49 1_555 B C 63 B N3 C 63 1_555 hydrog WATSON-CRICK B G 49 B N2 G 49 1_555 B C 63 B O2 C 63 1_555 hydrog WATSON-CRICK B G 49 B O6 G 49 1_555 B C 63 B N4 C 63 1_555 hydrog TYPE_28_PAIR B G 50 B N1 G 50 1_555 B U 62 B O2 U 62 1_555 hydrog TYPE_28_PAIR B G 50 B O6 G 50 1_555 B U 62 B N3 U 62 1_555 hydrog WATSON-CRICK B C 51 B N3 C 51 1_555 B G 61 B N1 G 61 1_555 hydrog WATSON-CRICK B C 51 B N4 C 51 1_555 B G 61 B O6 G 61 1_555 hydrog WATSON-CRICK B C 51 B O2 C 51 1_555 B G 61 B N2 G 61 1_555 hydrog WATSON-CRICK B A 52 B N1 A 52 1_555 B U 60 B N3 U 60 1_555 hydrog WATSON-CRICK B A 52 B N6 A 52 1_555 B U 60 B O4 U 60 1_555 hydrog C-A MISPAIR B C 54 B O2 C 54 1_555 B A 58 B N6 A 58 1_555 RNA riboswitch, aptamer, dopamine, SELEX, L-DOPA, RNA 12CJ PDB 1 1 12CJ 1 77 12CJ 1 77 12CJ A 1 1 77 1 77 12CJ 1 77 12CJ B 1 1 77 5 C 1 2 1 C 2y