0.017232 0.000000 0.005106 0.000000 0.016863 0.000000 0.000000 0.000000 0.015379 0.00000 0.00000 0.00000 3.54356 2.42580 25.62398 1.50364 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 21.85313 5.04979 2.45200 36.11361 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0.51345 0.48472 24.73122 6.32584 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 16.37977 2.54835 4.54127 84.28225 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.01032 2.96436 19.97189 1.75589 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 4.49882 3.47563 15.80542 1.70748 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 5.12366 3.84317 3.49406 27.47979 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 9.51135 5.44231 1.42069 35.72801 0.0 2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. 0000-0003-3953-8978 Siwik, S.H. 0000-0002-1384-6625 Batey, R.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 106.506 90.000 58.033 59.302 67.817 223772.352 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking H2 O 18.015 WATER non-polymer K 1 39.098 POTASSIUM ION non-polymer C8 H11 N O2 153.178 L-DOPAMINE DOPAMINE non-polymer Co H18 N6 3 161.116 COBALT HEXAMMINE(III) non-polymer C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 R C N 49 N O N 50 R C N 51 N N N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N C N 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N P N 75 N O N 76 N O N 77 N O N 78 N C N 79 R C N 80 N O N 81 S C N 82 N O N 83 R C N 84 N O N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C N 90 N C N 91 N O N 92 N N N 93 N C N 94 N N N 95 N N Y 96 N C N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N O N 112 N H N 113 N H N 114 N K N 115 N C Y 116 N C Y 117 N C Y 118 N C Y 119 N C Y 120 N C Y 121 N C N 122 N O N 123 N O N 124 N C N 125 N N N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N CO N 138 N N N 139 N N N 140 N N N 141 N N N 142 N N N 143 N N N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N O N 163 N P N 164 N O N 165 N O N 166 N O N 167 N C N 168 R C N 169 N O N 170 S C N 171 N O N 172 R C N 173 N O N 174 R C N 175 N N N 176 N C N 177 N O N 178 N N N 179 N C N 180 N O N 181 N C N 182 N C N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing Y 100 N sing Y 101 N sing Y 102 N doub N 103 N sing Y 104 N sing N 105 N sing Y 106 N doub N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing Y 122 N doub Y 123 N sing Y 124 N sing Y 125 N doub N 126 N sing Y 127 N sing N 128 N sing Y 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N doub N 197 N sing N 198 N sing To Be Published 0353 Structural characterization of a dopamine-binding aptamer raised through scaffolded selection 0000-0003-3953-8978 0000-0002-1384-6625 10.2210/pdb12ci/pdb pdb_000012ci 100 1 N PIXEL 2022-01-24 DECTRIS PILATUS 200K M SINGLE WAVELENGTH M x-ray 1 1.54178 1.0 1.54178 SEALED TUBE RIGAKU MICROMAX-003 26399.678 DGR-1A aptamer 2 man polymer 39.098 POTASSIUM ION 3 syn non-polymer 161.116 COBALT HEXAMMINE(III) 19 syn non-polymer 153.178 L-DOPAMINE 2 nat non-polymer 18.015 water 45 nat water no no GGACGAUAGACUCCGUAAUUCGCGUGGAUAUGGCACGCAGUCAGGUGUUGGGCACCGUAAAUGUCCCACAUAGUAUCGUC CA GGACGAUAGACUCCGUAAUUCGCGUGGAUAUGGCACGCAGUCAGGUGUUGGGCACCGUAAAUGUCCCACAUAGUAUCGUC CA A,B polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 82 32630 synthetic construct 32630 synthetic construct Biological sequence 1 2.2 45 VAPOR DIFFUSION, HANGING DROP 6.0 11% v/v MPD, 8 mM hexaamine cobalt(III) chloride, 12 mM sodium chloride, 80 mM potassium chloride, 40 mM MES 293 -1.433 1 19 A 1 A 81 -18.699 A_G1:C81_A 1 1.967 -0.985 -0.028 -0.447 -2.672 1 19 A 2 A 80 -6.769 A_G2:C80_A 2 -10.062 0.685 0.147 -0.088 -9.504 1 20 A 3 A 79 -6.276 A_A3:U79_A 3 -20.007 0.307 -0.364 -0.510 -10.170 1 19 A 4 A 78 0.824 A_C4:G78_A 4 -10.089 -0.517 0.884 -0.054 -7.403 1 19 A 5 A 77 -9.427 A_G5:C77_A 5 -10.857 0.733 0.288 -0.060 -5.697 1 20 A 6 A 76 -6.043 A_A6:U76_A 6 -15.932 0.024 0.434 -0.103 -3.938 1 20 A 7 A 75 -1.552 A_U7:A75_A 7 -16.141 0.532 0.439 0.030 -4.909 1 20 A 8 A 74 -3.840 A_A8:U74_A 8 -16.756 -0.323 0.606 -0.289 -28.665 4 7 A 9 A 15 -102.581 A_G9:G15_A 9 10.794 5.590 0.215 -0.659 -0.739 1 19 A 44 A 14 2.072 A_G44:C14_A 10 -3.861 -0.641 -0.018 -0.062 -5.120 1 19 A 45 A 13 2.495 A_G45:C13_A 11 -19.764 0.038 -0.211 0.196 -9.437 2 21 A 46 A 10 -173.839 A_U46:A10_A 12 25.412 -0.152 0.171 -1.483 13.583 1 20 A 20 A 39 1.716 A_U20:A39_A 13 -3.467 -0.326 -0.680 0.028 14.369 1 19 A 22 A 38 -1.357 A_G22:C38_A 14 -16.375 0.682 0.690 -0.075 6.222 1 19 A 23 A 37 -1.098 A_C23:G37_A 15 -15.618 0.119 0.095 -0.115 -5.015 1 19 A 24 A 36 2.030 A_G24:C36_A 16 -15.035 0.105 -0.404 -0.335 -8.417 1 20 A 25 A 35 -1.224 A_U25:A35_A 17 -8.276 0.245 0.111 -0.252 15.258 1 19 A 26 A 34 0.874 A_G26:C34_A 18 -10.676 0.625 0.667 -0.133 3.844 4 5 A 30 A 59 112.108 A_A30:A59_A 19 -3.136 4.135 0.022 1.482 19.055 1 19 A 56 A 32 -0.323 A_C56:G32_A 20 3.254 0.023 -0.853 -0.115 7.042 4 24 A 60 A 29 100.008 A_A60:U29_A 21 -12.147 3.944 0.938 -1.863 22.471 1 19 A 33 A 55 7.759 A_G33:C55_A 22 -7.277 -0.560 -0.477 -0.005 0.613 4 24 A 17 A 71 -99.445 A_A17:U71_A 23 -19.485 -4.005 -0.241 -1.530 12.226 4 5 A 18 A 70 -109.874 A_A18:A70_A 24 -29.284 -3.924 -0.837 1.666 -13.858 1 19 A 47 A 69 4.891 A_G47:C69_A 25 -7.724 0.006 -0.160 0.153 -14.289 1 20 A 49 A 68 11.798 A_U49:A68_A 26 5.119 0.442 0.547 -0.243 3.137 1 19 A 50 A 67 3.201 A_G50:C67_A 27 -12.867 -0.027 0.186 -0.287 4.076 1 19 A 51 A 66 -2.088 A_G51:C66_A 28 -1.727 0.229 0.131 -0.160 -4.697 1 19 A 52 A 65 3.552 A_G52:C65_A 29 -11.458 -0.441 0.099 -0.351 3.962 1 19 A 53 A 63 0.241 A_C53:G63_A 30 -14.533 -0.272 0.576 -0.374 -1.424 1 19 B 1 B 81 -2.122 B_G1:C81_B 31 -1.991 -0.155 -0.046 -0.061 -3.748 1 19 B 2 B 80 5.729 B_G2:C80_B 32 -13.899 -0.240 0.150 -0.367 -8.241 1 20 B 3 B 79 -6.427 B_A3:U79_B 33 -11.738 -0.077 0.150 -0.354 3.211 1 19 B 4 B 78 3.192 B_C4:G78_B 34 -13.054 0.343 -0.016 -0.134 -5.907 1 19 B 5 B 77 4.687 B_G5:C77_B 35 -11.070 -0.356 0.288 -0.143 -0.767 1 20 B 6 B 76 -3.250 B_A6:U76_B 36 -13.838 0.040 0.149 -0.187 -0.310 1 20 B 7 B 75 5.301 B_U7:A75_B 37 -22.846 0.446 0.137 -0.293 -15.699 1 20 B 8 B 74 -1.744 B_A8:U74_B 38 -14.014 0.202 0.054 -0.056 1.732 6 10 B 9 B 43 -71.639 B_G9:A43_B 39 10.216 3.382 -0.539 -3.784 -4.866 1 19 B 14 B 44 1.384 B_C14:G44_B 40 -2.663 0.355 0.674 -0.105 4.513 1 19 B 13 B 45 2.108 B_C13:G45_B 41 -21.051 -0.129 0.319 -0.306 11.601 2 21 B 10 B 46 162.572 B_A10:U46_B 42 -14.429 -0.045 -0.170 1.170 -17.240 1 20 B 39 B 20 4.858 B_A39:U20_B 43 7.400 0.250 -0.091 -0.048 -20.164 1 19 B 38 B 22 -4.509 B_C38:G22_B 44 -13.643 -0.035 1.051 -0.264 -7.998 1 19 B 37 B 23 1.009 B_G37:C23_B 45 -13.970 -0.173 0.074 -0.250 6.802 1 19 B 36 B 24 6.587 B_C36:G24_B 46 -8.405 0.265 0.258 0.120 0.324 1 20 B 35 B 25 0.203 B_A35:U25_B 47 -4.388 0.142 0.390 -0.141 -14.327 1 19 B 34 B 26 0.526 B_C34:G26_B 48 -5.047 0.027 0.016 -0.038 -53.415 B 15 B 73 154.877 B_G15:G73_B 49 1.086 3.123 -1.046 7.623 -0.812 4 24 B 17 B 71 -101.573 B_A17:U71_B 50 -12.992 -3.840 -0.246 -1.753 13.968 4 5 B 18 B 70 -104.201 B_A18:A70_B 51 -35.135 -3.980 -1.057 1.289 -15.028 1 19 B 47 B 69 0.970 B_G47:C69_B 52 -17.814 -0.351 -0.492 0.007 -3.370 1 20 B 49 B 68 8.275 B_U49:A68_B 53 -4.727 0.234 -0.015 0.080 -2.307 1 19 B 50 B 67 3.027 B_G50:C67_B 54 0.916 -0.863 -0.061 -0.385 -2.152 1 19 B 51 B 66 -4.273 B_G51:C66_B 55 -10.124 -0.331 0.009 -0.485 0.893 1 19 B 52 B 65 5.015 B_G52:C65_B 56 -6.054 -0.156 0.081 -0.146 14.424 1 19 B 53 B 63 6.225 B_C53:G63_B 57 -12.522 0.419 -0.246 -0.224 -0.729 4 5 B 30 B 59 107.524 B_A30:A59_B 58 1.112 4.979 0.092 0.562 9.571 1 19 B 56 B 32 -1.649 B_C56:G32_B 59 7.392 -0.288 -0.281 -0.271 7.522 4 24 B 60 B 29 99.834 B_A60:U29_B 60 -8.500 4.150 0.953 -1.827 15.645 1 19 B 33 B 55 -1.053 B_G33:C55_B 61 -12.415 -0.108 -0.462 0.011 2.852 38.458 A A 1 2 9.280 A A 81 80 3.254 6.083 0.317 -2.174 AA_G1G2:C80C81_AA 1 -2.963 4.520 37.881 -4.013 -0.827 2.921 34.313 A A 2 3 8.824 A A 80 79 3.318 5.167 -0.532 -1.647 AA_G2A3:U79C80_AA 2 5.376 -9.182 33.517 -3.573 1.716 2.723 29.464 A A 3 4 11.247 A A 79 78 3.185 5.657 0.504 -1.436 AA_A3C4:G78U79_AA 3 -5.172 10.283 28.471 -3.935 -2.006 2.645 39.040 A A 4 5 9.853 A A 78 77 2.955 6.526 0.163 -1.603 AA_C4G5:C77G78_AA 4 6.554 -9.894 37.970 -3.083 0.442 3.039 28.621 A A 5 6 3.845 A A 77 76 3.173 1.899 -0.069 -1.919 AA_G5A6:U76C77_AA 5 0.882 -1.787 28.546 -4.290 0.330 3.161 34.782 A A 6 7 0.625 A A 76 75 3.150 0.373 0.437 -1.392 AA_A6U7:A75U76_AA 6 2.969 -4.973 34.657 -2.383 -0.294 2.816 31.011 A A 7 8 9.353 A A 75 74 3.123 4.980 0.574 -1.733 AA_U7A8:U74A75_AA 7 0.181 -0.340 30.618 -4.117 -1.041 3.203 98.308 A A 8 9 0.329 A A 74 15 3.377 0.496 -1.353 -2.460 AA_A8G9:G15U74_AA 8 14.131 -9.358 97.547 -1.634 1.128 2.803 33.664 A A 9 44 18.643 A A 15 14 3.161 10.503 3.504 2.566 AA_G9G44:C14G15_AA 9 -8.690 15.424 30.853 2.797 -7.403 2.943 35.827 A A 44 45 11.603 A A 14 13 3.357 7.094 0.096 -1.826 AA_G44G45:C13C14_AA 10 -0.324 0.529 35.139 -3.959 -0.200 3.709 130.489 A A 45 46 0.781 A A 13 10 3.732 1.419 -0.955 -0.891 AA_G45U46:A10C13_AA 11 4.325 -2.381 130.447 -0.502 0.562 4.499 -22.191 A A 46 20 -24.924 A A 10 39 3.111 9.253 1.956 -4.987 AA_U46U20:A39A10_AA 12 3.909 10.529 -19.814 8.647 6.903 3.591 56.724 A A 20 22 -2.952 A A 39 38 3.254 -2.755 -1.772 1.228 AA_U20G22:C38A39_AA 13 -19.567 20.967 53.441 1.459 0.683 3.035 35.956 A A 22 23 5.372 A A 38 37 3.213 3.306 0.254 -1.962 AA_G22C23:G37C38_AA 14 3.752 -6.097 35.618 -3.630 0.102 2.744 30.854 A A 23 24 20.148 A A 37 36 3.570 10.473 -0.053 -1.723 AA_C23G24:C36G37_AA 15 4.732 -9.104 28.682 -5.281 1.023 2.906 34.642 A A 24 25 12.471 A A 36 35 3.287 7.358 -0.283 -1.560 AA_G24U25:A35C36_AA 16 -3.783 6.411 33.669 -3.707 -0.083 2.097 27.538 A A 25 26 11.976 A A 35 34 2.529 5.626 -0.217 -1.865 AA_U25G26:C34A35_AA 17 -5.334 11.353 26.444 -4.913 -0.487 3.265 -137.766 A A 30 56 2.487 A A 59 32 3.168 -4.640 -3.515 1.122 AA_A30C56:G32A59_AA 18 6.822 3.657 -137.651 -0.574 -1.844 5.470 168.432 A A 56 60 71.121 A A 32 29 7.300 139.263 -0.236 -1.292 AA_C56A60:U29G32_AA 19 76.226 -38.928 113.703 -2.301 1.022 3.387 36.751 A A 17 18 5.793 A A 71 70 3.324 3.592 1.132 -1.131 AA_A17A18:A70U71_AA 20 11.260 -18.161 34.861 -2.311 -0.176 3.549 86.599 A A 18 47 11.526 A A 70 69 4.105 15.748 2.361 -4.143 AA_A18G47:C69A70_AA 21 4.577 -3.350 85.336 -3.432 -1.602 3.224 40.245 A A 47 49 4.409 A A 69 68 3.241 3.021 -1.040 -1.707 AA_G47U49:A68C69_AA 22 -5.938 8.667 39.712 -2.822 0.841 2.474 29.695 A A 49 50 -0.600 A A 68 67 2.598 -0.306 -0.738 -1.637 AA_U49G50:C67A68_AA 23 4.567 -8.945 29.348 -3.145 2.188 3.214 29.761 A A 50 51 5.622 A A 67 66 3.383 2.880 -0.365 -1.817 AA_G50G51:C66C67_AA 24 -2.338 4.564 29.534 -4.148 0.215 2.847 29.798 A A 51 52 12.613 A A 66 65 3.321 6.425 0.908 -2.262 AA_G51G52:C65C66_AA 25 3.274 -6.428 28.932 -5.683 -1.112 2.591 34.679 A A 52 53 6.780 A A 65 63 2.933 4.021 1.051 -1.413 AA_G52C53:G63C65_AA 26 -4.707 7.936 34.139 -2.896 -2.378 3.000 36.612 B B 1 2 8.810 B B 81 80 3.255 5.509 -0.212 -1.555 BB_G1G2:C80C81_BB 27 -3.013 4.818 36.088 -3.205 -0.062 2.853 36.506 B B 2 3 12.171 B B 80 79 3.193 7.571 -0.860 -1.482 BB_G2A3:U79C80_BB 28 -1.029 1.654 35.724 -3.344 1.240 3.004 33.018 B B 3 4 2.210 B B 79 78 2.902 1.248 1.171 -1.771 BB_A3C4:G78U79_BB 29 6.467 -11.451 32.372 -3.309 -1.061 2.347 30.228 B B 4 5 21.474 B B 78 77 3.197 10.953 0.361 -1.772 BB_C4G5:C77G78_BB 30 -0.952 1.866 28.201 -5.349 -0.862 3.097 36.183 B B 5 6 0.363 B B 77 76 3.122 0.225 -0.532 -1.354 BB_G5A6:U76C77_BB 31 1.076 -1.732 36.167 -2.210 1.001 3.065 32.520 B B 6 7 8.674 B B 76 75 3.200 4.830 0.901 -1.258 BB_A6U7:A75U76_BB 32 3.789 -6.805 31.951 -3.063 -0.969 2.706 38.159 B B 7 8 20.630 B B 75 74 3.454 13.214 -0.028 -1.603 BB_U7A8:U74A75_BB 33 2.903 -4.532 35.764 -4.080 0.400 3.367 71.612 B B 8 9 -7.315 B B 74 43 3.310 -8.543 -1.648 -0.430 BB_A8G9:A43U74_BB 34 -1.564 1.339 71.153 -0.071 1.355 1.210 179.745 B B 9 14 36.814 B B 43 44 0.694 73.601 -0.139 3.314 BB_G9C14:G44A43_BB 35 163.696 -81.879 121.116 1.554 0.298 -3.274 -35.756 B B 14 13 6.295 B B 44 45 -3.498 -3.852 0.076 1.890 BB_C14C13:G45G44_BB 36 3.419 5.586 -35.395 -3.657 -0.389 0.266 171.482 B B 13 10 80.054 B B 45 46 1.307 153.648 3.046 1.560 BB_C13A10:U46G45_BB 37 -75.875 39.533 19.081 0.184 -1.822 -2.084 179.670 B B 10 39 11.907 B B 46 20 -2.251 23.814 -4.918 -2.185 BB_A10A39:U20U46_BB 38 -169.272 84.639 175.825 -1.087 2.498 -3.596 -54.694 B B 39 38 -5.579 B B 20 22 -3.228 5.045 -2.038 -0.864 BB_A39C38:G22U20_BB 39 -17.146 -18.960 -51.906 1.266 -1.109 -3.539 -38.261 B B 38 37 -0.376 B B 22 23 -3.492 0.245 0.500 1.852 BB_C38G37:C23G22_BB 40 5.765 8.826 -37.839 -2.792 -0.019 -1.893 -30.724 B B 37 36 28.129 B B 23 24 -3.300 -14.314 -0.464 2.342 BB_G37C36:G24C23_BB 41 -3.613 -7.100 -27.020 -6.802 -0.275 -3.133 -31.878 B B 36 35 0.557 B B 24 25 -3.112 -0.305 -0.592 1.766 BB_C36A35:U25G24_BB 42 -2.602 -4.743 -31.773 -3.268 -0.625 -2.869 -24.827 B B 35 34 1.169 B B 25 26 -2.904 -0.503 -0.119 1.759 BB_A35C34:G26U25_BB 43 -0.187 -0.434 -24.821 -4.225 -0.228 -0.542 -175.744 B B 15 17 59.011 B B 73 71 -0.690 -117.719 -4.590 -3.128 BB_G15A17:U71G73_BB 44 104.935 52.602 -157.861 1.521 -2.336 3.390 36.398 B B 17 18 2.537 B B 71 70 3.269 1.571 1.185 -1.442 BB_A17A18:A70U71_BB 45 8.585 -13.870 35.370 -2.534 -0.663 4.170 82.657 B B 18 47 9.765 B B 70 69 4.617 12.850 1.653 -4.042 BB_A18G47:C69A70_BB 46 7.428 -5.645 81.550 -3.490 -1.004 2.976 50.386 B B 47 49 4.048 B B 69 68 2.834 3.430 -1.710 -1.316 BB_G47U49:A68C69_BB 47 -8.364 9.871 49.621 -1.764 1.475 2.815 26.570 B B 49 50 9.887 B B 68 67 3.226 4.522 -0.554 -2.090 BB_U49G50:C67A68_BB 48 0.714 -1.561 26.180 -5.655 1.380 3.528 25.325 B B 50 51 -2.606 B B 67 66 3.403 -1.140 0.390 -2.416 BB_G50G51:C66C67_BB 49 2.672 -6.107 25.161 -5.159 -0.067 2.969 31.772 B B 51 52 6.453 B B 66 65 3.195 3.523 0.688 -2.264 BB_G51G52:C65C66_BB 50 2.092 -3.831 31.514 -4.746 -0.894 2.664 36.916 B B 52 53 11.485 B B 65 63 2.859 7.221 0.769 -1.032 BB_G52C53:G63C65_BB 51 3.007 -4.782 36.106 -2.463 -0.867 3.364 -143.025 B B 30 56 0.561 B B 59 32 3.341 -1.064 -2.842 1.073 BB_A30C56:G32A59_BB 52 2.414 1.273 -143.014 -0.560 -1.486 5.492 175.412 B B 56 60 70.017 B B 32 29 6.444 139.580 -1.170 -3.380 BB_C56A60:U29G32_BB 53 77.641 -38.947 153.717 -2.284 0.915 repository Initial release 1 0 2026-05-13 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35 GM152029 robert.batey@colorado.edu 0000-0002-1384-6625 Robert Batey T. principal investigator/group leader N RCSB Y RCSB 2026-03-26 REL REL LDP LDP SUBJECT OF INVESTIGATION K POTASSIUM ION NCO COBALT HEXAMMINE(III) LDP L-DOPAMINE HOH water Y N DGR-1B apo structure Other experimental model K 1 2 K K 101 A K 3 2 K K 102 A NCO 1 3 NCO NCO 103 A NCO 2 3 NCO NCO 104 A NCO 4 3 NCO NCO 105 A NCO 6 3 NCO NCO 106 A NCO 7 3 NCO NCO 107 A NCO 8 3 NCO NCO 108 A NCO 9 3 NCO NCO 109 A NCO 10 3 NCO NCO 110 A NCO 11 3 NCO NCO 111 A LDP 1 4 LDP LDP 112 A K 2 2 K K 101 B NCO 3 3 NCO NCO 102 B NCO 5 3 NCO NCO 103 B NCO 12 3 NCO NCO 104 B NCO 13 3 NCO NCO 105 B NCO 14 3 NCO NCO 106 B NCO 15 3 NCO NCO 107 B NCO 16 3 NCO NCO 108 B NCO 17 3 NCO NCO 109 B NCO 18 3 NCO NCO 110 B NCO 19 3 NCO NCO 111 B LDP 1 4 LDP LDP 112 B HOH 19 5 HOH HOH 201 A HOH 1 5 HOH HOH 202 A HOH 9 5 HOH HOH 203 A HOH 34 5 HOH HOH 204 A HOH 37 5 HOH HOH 205 A HOH 39 5 HOH HOH 206 A HOH 22 5 HOH HOH 207 A HOH 26 5 HOH HOH 208 A HOH 13 5 HOH HOH 209 A HOH 18 5 HOH HOH 210 A HOH 12 5 HOH HOH 211 A HOH 27 5 HOH HOH 212 A HOH 24 5 HOH HOH 213 A HOH 32 5 HOH HOH 214 A HOH 33 5 HOH HOH 215 A HOH 21 5 HOH HOH 216 A HOH 7 5 HOH HOH 217 A HOH 29 5 HOH HOH 218 A HOH 35 5 HOH HOH 219 A HOH 28 5 HOH HOH 220 A HOH 3 5 HOH HOH 221 A HOH 41 5 HOH HOH 222 A HOH 16 5 HOH HOH 223 A HOH 36 5 HOH HOH 224 A HOH 30 5 HOH HOH 225 A HOH 40 5 HOH HOH 226 A HOH 31 5 HOH HOH 227 A HOH 45 5 HOH HOH 228 A HOH 44 5 HOH HOH 201 B HOH 10 5 HOH HOH 202 B HOH 6 5 HOH HOH 203 B HOH 23 5 HOH HOH 204 B HOH 8 5 HOH HOH 205 B HOH 2 5 HOH HOH 206 B HOH 25 5 HOH HOH 207 B HOH 42 5 HOH HOH 208 B HOH 20 5 HOH HOH 209 B HOH 4 5 HOH HOH 210 B HOH 11 5 HOH HOH 211 B HOH 5 5 HOH HOH 212 B HOH 17 5 HOH HOH 213 B HOH 43 5 HOH HOH 214 B HOH 38 5 HOH HOH 215 B HOH 15 5 HOH HOH 216 B HOH 14 5 HOH HOH 217 B G 1 n 1 G 1 A G 2 n 2 G 2 A A 3 n 3 A 3 A C 4 n 4 C 4 A G 5 n 5 G 5 A A 6 n 6 A 6 A U 7 n 7 U 7 A A 8 n 8 A 8 A G 9 n 9 G 9 A A 10 n 10 A 10 A C 11 n 11 C 11 A U 12 n 12 U 12 A C 13 n 13 C 13 A C 14 n 14 C 14 A G 15 n 15 G 15 A U 16 n 16 U 16 A A 17 n 17 A 17 A A 18 n 18 A 18 A U 19 n 19 U 19 A U 20 n 20 U 20 A C 21 n 21 C 21 A G 22 n 22 G 22 A C 23 n 23 C 23 A G 24 n 24 G 24 A U 25 n 25 U 25 A G 26 n 26 G 26 A G 27 n 27 G 27 A A 28 n 28 A 28 A U 29 n 29 U 29 A A 30 n 30 A 30 A U 31 n 31 U 31 A G 32 n 32 G 32 A G 33 n 33 G 33 A C 34 n 34 C 34 A A 35 n 35 A 35 A C 36 n 36 C 36 A G 37 n 37 G 37 A C 38 n 38 C 38 A A 39 n 39 A 39 A G 40 n 40 G 40 A U 41 n 41 U 41 A C 42 n 42 C 42 A A 43 n 43 A 43 A G 44 n 44 G 44 A G 45 n 45 G 45 A U 46 n 46 U 46 A G 47 n 47 G 47 A U 48 n 48 U 48 A U 49 n 49 U 49 A G 50 n 50 G 50 A G 51 n 51 G 51 A G 52 n 52 G 52 A C 53 n 53 C 53 A A 54 n 54 A 54 A C 55 n 55 C 55 A C 56 n 56 C 56 A G 57 n 57 G 57 A U 58 n 58 U 58 A A 59 n 59 A 59 A A 60 n 60 A 60 A A 61 n 61 A 61 A U 62 n 62 U 62 A G 63 n 63 G 63 A U 64 n 64 U 64 A C 65 n 65 C 65 A C 66 n 66 C 66 A C 67 n 67 C 67 A A 68 n 68 A 68 A C 69 n 69 C 69 A A 70 n 70 A 70 A U 71 n 71 U 71 A A 72 n 72 A 72 A G 73 n 73 G 73 A U 74 n 74 U 74 A A 75 n 75 A 75 A U 76 n 76 U 76 A C 77 n 77 C 77 A G 78 n 78 G 78 A U 79 n 79 U 79 A C 80 n 80 C 80 A C 81 n 81 C 81 A A 82 n 82 A 82 A G 1 n 1 G 1 B G 2 n 2 G 2 B A 3 n 3 A 3 B C 4 n 4 C 4 B G 5 n 5 G 5 B A 6 n 6 A 6 B U 7 n 7 U 7 B A 8 n 8 A 8 B G 9 n 9 G 9 B A 10 n 10 A 10 B C 11 n 11 C 11 B U 12 n 12 U 12 B C 13 n 13 C 13 B C 14 n 14 C 14 B G 15 n 15 G 15 B U 16 n 16 U 16 B A 17 n 17 A 17 B A 18 n 18 A 18 B U 19 n 19 U 19 B U 20 n 20 U 20 B C 21 n 21 C 21 B G 22 n 22 G 22 B C 23 n 23 C 23 B G 24 n 24 G 24 B U 25 n 25 U 25 B G 26 n 26 G 26 B G 27 n 27 G 27 B A 28 n 28 A 28 B U 29 n 29 U 29 B A 30 n 30 A 30 B U 31 n 31 U 31 B G 32 n 32 G 32 B G 33 n 33 G 33 B C 34 n 34 C 34 B A 35 n 35 A 35 B C 36 n 36 C 36 B G 37 n 37 G 37 B C 38 n 38 C 38 B A 39 n 39 A 39 B G 40 n 40 G 40 B U 41 n 41 U 41 B C 42 n 42 C 42 B A 43 n 43 A 43 B G 44 n 44 G 44 B G 45 n 45 G 45 B U 46 n 46 U 46 B G 47 n 47 G 47 B U 48 n 48 U 48 B U 49 n 49 U 49 B G 50 n 50 G 50 B G 51 n 51 G 51 B G 52 n 52 G 52 B C 53 n 53 C 53 B A 54 n 54 A 54 B C 55 n 55 C 55 B C 56 n 56 C 56 B G 57 n 57 G 57 B U 58 n 58 U 58 B A 59 n 59 A 59 B A 60 n 60 A 60 B A 61 n 61 A 61 B U 62 n 62 U 62 B G 63 n 63 G 63 B U 64 n 64 U 64 B C 65 n 65 C 65 B C 66 n 66 C 66 B C 67 n 67 C 67 B A 68 n 68 A 68 B C 69 n 69 C 69 B A 70 n 70 A 70 B U 71 n 71 U 71 B A 72 n 72 A 72 B G 73 n 73 G 73 B U 74 n 74 U 74 B A 75 n 75 A 75 B U 76 n 76 U 76 B C 77 n 77 C 77 B G 78 n 78 G 78 B U 79 n 79 U 79 B C 80 n 80 C 80 B C 81 n 81 C 81 B A 82 n 82 A 82 B author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric isothermal titration calorimetry isothermal titration calorimetry A G 9 A O3' G 9 1_555 A K 101 C K K 1_555 A A 10 A OP1 A 10 1_555 45.3 A G 9 A O3' G 9 1_555 A K 101 C K K 1_555 A G 44 A O6 G 44 1_555 88.9 A A 10 A OP1 A 10 1_555 A K 101 C K K 1_555 A G 44 A O6 G 44 1_555 132.9 A G 9 A O3' G 9 1_555 A K 101 C K K 1_555 A G 45 A O6 G 45 1_555 139.0 A A 10 A OP1 A 10 1_555 A K 101 C K K 1_555 A G 45 A O6 G 45 1_555 128.1 A G 44 A O6 G 44 1_555 A K 101 C K K 1_555 A G 45 A O6 G 45 1_555 75.9 A G 9 A O3' G 9 1_555 A K 101 C K K 1_555 A LDP 112 N O2 LDP 1_555 141.9 A A 10 A OP1 A 10 1_555 A K 101 C K K 1_555 A LDP 112 N O2 LDP 1_555 131.8 A G 44 A O6 G 44 1_555 A K 101 C K K 1_555 A LDP 112 N O2 LDP 1_555 89.2 A G 45 A O6 G 45 1_555 A K 101 C K K 1_555 A LDP 112 N O2 LDP 1_555 76.7 A C 13 A OP1 C 13 1_555 A K 102 D K K 1_555 A C 14 A OP2 C 14 1_555 89.6 B A 10 B OP1 A 10 1_555 B K 101 O K K 1_555 B G 44 B O6 G 44 1_555 85.1 B A 10 B OP1 A 10 1_555 B K 101 O K K 1_555 B G 45 B O6 G 45 1_555 95.9 B G 44 B O6 G 44 1_555 B K 101 O K K 1_555 B G 45 B O6 G 45 1_555 81.2 B A 10 B OP1 A 10 1_555 B K 101 O K K 1_555 B LDP 112 Z O2 LDP 1_555 173.8 B G 44 B O6 G 44 1_555 B K 101 O K K 1_555 B LDP 112 Z O2 LDP 1_555 88.9 B G 45 B O6 G 45 1_555 B K 101 O K K 1_555 B LDP 112 Z O2 LDP 1_555 81.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B B H21 O2 G C 2 80 1.47 1 B B H3 OP2 U G 41 44 1.50 1 A A H61 O4 A U 3 79 1.51 1 A A OP2 HO1 G LDP 45 112 1.53 1 A A OP1 HN53 C NCO 14 107 1.54 1 B B O2 H21 C G 53 63 1.58 1 A A OP2 O C HOH 53 201 1.83 1 A A OP1 O G HOH 73 202 1.93 1 A A OP1 N6 G NCO 50 103 1.97 1 A A O O HOH HOH 225 227 2.05 1 A A O4' O C HOH 65 203 2.07 1 A A O2' O G HOH 63 203 2.09 1 A A O3' O G HOH 5 204 2.09 1 A A OP2 O G HOH 63 205 2.16 1 B B OP1 O G HOH 32 201 2.16 1 A A OP2 O U HOH 25 206 2.16 1 A A OP2 O C HOH 4 207 2.17 1 B B OP2 HN12 U NCO 58 102 1.56 1_555 1_554 39.38 0.2751 0.2245 0.2296 2.59 23.30 1365 12290 13655 10.00 98.27 0.4427 random 1 FREE R-VALUE 1.34 MOLECULAR REPLACEMENT 33.1296 0.9000 1.1100 CDL v1.2 FLAT BULK SOLVENT MODEL 2.59 23.30 45 3701 158 3498 0 0.0047 4046 0.9584 6403 0.0398 820 0.0052 166 17.9620 1966 0.4007 0.3491 2.68 136 1228 99.49 0.4076 0.3373 2.79 136 1225 99.34 0.4108 0.3256 2.92 138 1240 99.21 0.3801 0.3027 3.07 136 1232 98.35 0.3480 0.2570 3.26 133 1178 96.26 0.2664 0.2129 3.51 134 1202 96.81 0.2537 0.2049 3.87 134 1225 97.49 0.2196 0.1883 4.42 138 1237 98.92 0.2135 0.1733 5.56 140 1256 98.80 0.2154 0.1862 23.30 140 1267 98.05 43.07 2.50 25.00 12CI 15514 .945 .052 .096 1 18.30 3.3 99.2 0.660 2.50 2.54 1.79 756 .731 0.919 .448 .801 1 3.0 98.1 refinement PHENIX 1.14_3260 data reduction HKL-3000 data scaling HKL-3000 phasing PHASER model building Coot 4 monoclinic P 1 21 1 P 2yb x,y,z -x,y+1/2,-z N Structure of dopamine-binding aptamer, DGR-1A, in complex with dopamine 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 5 N N 5 N N metalc 3.468 A G 9 A O3' G 9 1_555 A K 101 C K K 1_555 metalc 2.607 A A 10 A OP1 A 10 1_555 A K 101 C K K 1_555 metalc 2.603 A C 13 A OP1 C 13 1_555 A K 102 D K K 1_555 metalc 2.422 A C 14 A OP2 C 14 1_555 A K 102 D K K 1_555 metalc 2.788 A G 44 A O6 G 44 1_555 A K 101 C K K 1_555 metalc 2.741 A G 45 A O6 G 45 1_555 A K 101 C K K 1_555 metalc 3.033 A K 101 C K K 1_555 A LDP 112 N O2 LDP 1_555 metalc 2.917 B A 10 B OP1 A 10 1_555 B K 101 O K K 1_555 metalc 2.758 B G 44 B O6 G 44 1_555 B K 101 O K K 1_555 metalc 2.799 B G 45 B O6 G 45 1_555 B K 101 O K K 1_555 metalc 2.590 B K 101 O K K 1_555 B LDP 112 Z O2 LDP 1_555 hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 A C 81 A N3 C 81 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 A C 81 A O2 C 81 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 A C 81 A N4 C 81 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 A C 80 A N3 C 80 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 A C 80 A O2 C 80 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 A C 80 A N4 C 80 1_555 hydrog WATSON-CRICK A A 3 A N1 A 3 1_555 A U 79 A N3 U 79 1_555 hydrog WATSON-CRICK A A 3 A N6 A 3 1_555 A U 79 A O4 U 79 1_555 hydrog WATSON-CRICK A C 4 A N3 C 4 1_555 A G 78 A N1 G 78 1_555 hydrog WATSON-CRICK A C 4 A N4 C 4 1_555 A G 78 A O6 G 78 1_555 hydrog WATSON-CRICK A C 4 A O2 C 4 1_555 A G 78 A N2 G 78 1_555 hydrog WATSON-CRICK A G 5 A N1 G 5 1_555 A C 77 A N3 C 77 1_555 hydrog WATSON-CRICK A G 5 A N2 G 5 1_555 A C 77 A O2 C 77 1_555 hydrog WATSON-CRICK A G 5 A O6 G 5 1_555 A C 77 A N4 C 77 1_555 hydrog WATSON-CRICK A A 6 A N1 A 6 1_555 A U 76 A N3 U 76 1_555 hydrog WATSON-CRICK A A 6 A N6 A 6 1_555 A U 76 A O4 U 76 1_555 hydrog WATSON-CRICK A U 7 A N3 U 7 1_555 A A 75 A N1 A 75 1_555 hydrog WATSON-CRICK A U 7 A O4 U 7 1_555 A A 75 A N6 A 75 1_555 hydrog WATSON-CRICK A A 8 A N1 A 8 1_555 A U 74 A N3 U 74 1_555 hydrog WATSON-CRICK A A 8 A N6 A 8 1_555 A U 74 A O4 U 74 1_555 hydrog TYPE_7_PAIR A G 9 A N1 G 9 1_555 A G 15 A N7 G 15 1_555 hydrog TYPE_7_PAIR A G 9 A N2 G 9 1_555 A G 15 A O6 G 15 1_555 hydrog TYPE_10_PAIR A G 9 A N2 G 9 1_555 A A 43 A N1 A 43 1_555 hydrog TYPE_10_PAIR A G 9 A N3 G 9 1_555 A A 43 A N6 A 43 1_555 hydrog REVERSED HOOGSTEEN A A 10 A N6 A 10 1_555 A U 19 A O2 U 19 1_555 hydrog REVERSED HOOGSTEEN A A 10 A N7 A 10 1_555 A U 19 A N3 U 19 1_555 hydrog REVERSED WATSON-CRICK A A 10 A N1 A 10 1_555 A U 46 A N3 U 46 1_555 hydrog REVERSED WATSON-CRICK A A 10 A N6 A 10 1_555 A U 46 A O2 U 46 1_555 hydrog WATSON-CRICK A C 13 A N3 C 13 1_555 A G 45 A N1 G 45 1_555 hydrog WATSON-CRICK A C 13 A N4 C 13 1_555 A G 45 A O6 G 45 1_555 hydrog WATSON-CRICK A C 13 A O2 C 13 1_555 A G 45 A N2 G 45 1_555 hydrog WATSON-CRICK A C 14 A N3 C 14 1_555 A G 44 A N1 G 44 1_555 hydrog WATSON-CRICK A C 14 A N4 C 14 1_555 A G 44 A O6 G 44 1_555 hydrog WATSON-CRICK A C 14 A O2 C 14 1_555 A G 44 A N2 G 44 1_555 hydrog G-G MISPAIR A G 15 A N2 G 15 1_555 A G 73 A N3 G 73 1_555 hydrog REVERSED HOOGSTEEN A A 17 A N6 A 17 1_555 A U 71 A O2 U 71 1_555 hydrog REVERSED HOOGSTEEN A A 17 A N7 A 17 1_555 A U 71 A N3 U 71 1_555 hydrog A-G MISPAIR A A 18 A N3 A 18 1_555 A G 45 A N2 G 45 1_555 hydrog TYPE_5_PAIR A A 18 A N6 A 18 1_555 A A 70 A N1 A 70 1_555 hydrog TYPE_5_PAIR A A 18 A N7 A 18 1_555 A A 70 A N6 A 70 1_555 hydrog WATSON-CRICK A U 20 A N3 U 20 1_555 A A 39 A N1 A 39 1_555 hydrog WATSON-CRICK A U 20 A O4 U 20 1_555 A A 39 A N6 A 39 1_555 hydrog WATSON-CRICK A G 22 A N1 G 22 1_555 A C 38 A N3 C 38 1_555 hydrog WATSON-CRICK A G 22 A N2 G 22 1_555 A C 38 A O2 C 38 1_555 hydrog WATSON-CRICK A G 22 A O6 G 22 1_555 A C 38 A N4 C 38 1_555 hydrog WATSON-CRICK A C 23 A N3 C 23 1_555 A G 37 A N1 G 37 1_555 hydrog WATSON-CRICK A C 23 A N4 C 23 1_555 A G 37 A O6 G 37 1_555 hydrog WATSON-CRICK A C 23 A O2 C 23 1_555 A G 37 A N2 G 37 1_555 hydrog WATSON-CRICK A G 24 A N1 G 24 1_555 A C 36 A N3 C 36 1_555 hydrog WATSON-CRICK A G 24 A N2 G 24 1_555 A C 36 A O2 C 36 1_555 hydrog WATSON-CRICK A G 24 A O6 G 24 1_555 A C 36 A N4 C 36 1_555 hydrog WATSON-CRICK A U 25 A N3 U 25 1_555 A A 35 A N1 A 35 1_555 hydrog WATSON-CRICK A U 25 A O4 U 25 1_555 A A 35 A N6 A 35 1_555 hydrog WATSON-CRICK A G 26 A N1 G 26 1_555 A C 34 A N3 C 34 1_555 hydrog WATSON-CRICK A G 26 A N2 G 26 1_555 A C 34 A O2 C 34 1_555 hydrog WATSON-CRICK A G 26 A O6 G 26 1_555 A C 34 A N4 C 34 1_555 hydrog TYPE_5_PAIR A A 28 A N1 A 28 1_555 A A 61 A N6 A 61 1_555 hydrog TYPE_5_PAIR A A 28 A N6 A 28 1_555 A A 61 A N7 A 61 1_555 hydrog U-G MISPAIR A U 29 A O2 U 29 1_555 A G 32 A N2 G 32 1_555 hydrog REVERSED HOOGSTEEN A U 29 A N3 U 29 1_555 A A 60 A N7 A 60 1_555 hydrog REVERSED HOOGSTEEN A U 29 A O2 U 29 1_555 A A 60 A N6 A 60 1_555 hydrog TYPE_5_PAIR A A 30 A N6 A 30 1_555 A A 59 A N1 A 59 1_555 hydrog TYPE_5_PAIR A A 30 A N7 A 30 1_555 A A 59 A N6 A 59 1_555 hydrog WATSON-CRICK A G 32 A N1 G 32 1_555 A C 56 A N3 C 56 1_555 hydrog WATSON-CRICK A G 32 A N2 G 32 1_555 A C 56 A O2 C 56 1_555 hydrog WATSON-CRICK A G 32 A O6 G 32 1_555 A C 56 A N4 C 56 1_555 hydrog WATSON-CRICK A G 33 A N1 G 33 1_555 A C 55 A N3 C 55 1_555 hydrog WATSON-CRICK A G 33 A N2 G 33 1_555 A C 55 A O2 C 55 1_555 hydrog WATSON-CRICK A G 33 A O6 G 33 1_555 A C 55 A N4 C 55 1_555 hydrog TYPE_10_PAIR A G 33 A N2 G 33 1_555 A A 61 A N1 A 61 1_555 hydrog TYPE_10_PAIR A G 33 A N3 G 33 1_555 A A 61 A N6 A 61 1_555 hydrog G-U MISPAIR A G 40 A N2 G 40 1_555 A U 46 A O4 U 46 1_555 hydrog C-U MISPAIR A C 42 A N4 C 42 1_555 A U 74 A O2 U 74 1_555 hydrog WATSON-CRICK A G 47 A N1 G 47 1_555 A C 69 A N3 C 69 1_555 hydrog WATSON-CRICK A G 47 A N2 G 47 1_555 A C 69 A O2 C 69 1_555 hydrog WATSON-CRICK A G 47 A O6 G 47 1_555 A C 69 A N4 C 69 1_555 hydrog WATSON-CRICK A U 49 A N3 U 49 1_555 A A 68 A N1 A 68 1_555 hydrog WATSON-CRICK A U 49 A O4 U 49 1_555 A A 68 A N6 A 68 1_555 hydrog WATSON-CRICK A G 50 A N1 G 50 1_555 A C 67 A N3 C 67 1_555 hydrog WATSON-CRICK A G 50 A N2 G 50 1_555 A C 67 A O2 C 67 1_555 hydrog WATSON-CRICK A G 50 A O6 G 50 1_555 A C 67 A N4 C 67 1_555 hydrog WATSON-CRICK A G 51 A N1 G 51 1_555 A C 66 A N3 C 66 1_555 hydrog WATSON-CRICK A G 51 A N2 G 51 1_555 A C 66 A O2 C 66 1_555 hydrog WATSON-CRICK A G 51 A O6 G 51 1_555 A C 66 A N4 C 66 1_555 hydrog WATSON-CRICK A G 52 A N1 G 52 1_555 A C 65 A N3 C 65 1_555 hydrog WATSON-CRICK A G 52 A N2 G 52 1_555 A C 65 A O2 C 65 1_555 hydrog WATSON-CRICK A G 52 A O6 G 52 1_555 A C 65 A N4 C 65 1_555 hydrog WATSON-CRICK A C 53 A N3 C 53 1_555 A G 63 A N1 G 63 1_555 hydrog WATSON-CRICK A C 53 A N4 C 53 1_555 A G 63 A O6 G 63 1_555 hydrog WATSON-CRICK A C 53 A O2 C 53 1_555 A G 63 A N2 G 63 1_555 hydrog C-A MISPAIR A C 56 A O2 C 56 1_555 A A 60 A N6 A 60 1_555 hydrog WATSON-CRICK B G 1 B N1 G 1 1_555 B C 81 B N3 C 81 1_555 hydrog WATSON-CRICK B G 1 B N2 G 1 1_555 B C 81 B O2 C 81 1_555 hydrog WATSON-CRICK B G 1 B O6 G 1 1_555 B C 81 B N4 C 81 1_555 hydrog WATSON-CRICK B G 2 B N1 G 2 1_555 B C 80 B N3 C 80 1_555 hydrog WATSON-CRICK B G 2 B N2 G 2 1_555 B C 80 B O2 C 80 1_555 hydrog WATSON-CRICK B G 2 B O6 G 2 1_555 B C 80 B N4 C 80 1_555 hydrog WATSON-CRICK B A 3 B N1 A 3 1_555 B U 79 B N3 U 79 1_555 hydrog WATSON-CRICK B A 3 B N6 A 3 1_555 B U 79 B O4 U 79 1_555 hydrog WATSON-CRICK B C 4 B N3 C 4 1_555 B G 78 B N1 G 78 1_555 hydrog WATSON-CRICK B C 4 B N4 C 4 1_555 B G 78 B O6 G 78 1_555 hydrog WATSON-CRICK B C 4 B O2 C 4 1_555 B G 78 B N2 G 78 1_555 hydrog WATSON-CRICK B G 5 B N1 G 5 1_555 B C 77 B N3 C 77 1_555 hydrog WATSON-CRICK B G 5 B N2 G 5 1_555 B C 77 B O2 C 77 1_555 hydrog WATSON-CRICK B G 5 B O6 G 5 1_555 B C 77 B N4 C 77 1_555 hydrog WATSON-CRICK B A 6 B N1 A 6 1_555 B U 76 B N3 U 76 1_555 hydrog WATSON-CRICK B A 6 B N6 A 6 1_555 B U 76 B O4 U 76 1_555 hydrog WATSON-CRICK B U 7 B N3 U 7 1_555 B A 75 B N1 A 75 1_555 hydrog WATSON-CRICK B U 7 B O4 U 7 1_555 B A 75 B N6 A 75 1_555 hydrog WATSON-CRICK B A 8 B N1 A 8 1_555 B U 74 B N3 U 74 1_555 hydrog WATSON-CRICK B A 8 B N6 A 8 1_555 B U 74 B O4 U 74 1_555 hydrog TYPE_7_PAIR B G 9 B N1 G 9 1_555 B G 15 B N7 G 15 1_555 hydrog TYPE_7_PAIR B G 9 B N2 G 9 1_555 B G 15 B O6 G 15 1_555 hydrog TYPE_10_PAIR B G 9 B N2 G 9 1_555 B A 43 B N1 A 43 1_555 hydrog TYPE_10_PAIR B G 9 B N3 G 9 1_555 B A 43 B N6 A 43 1_555 hydrog REVERSED HOOGSTEEN B A 10 B N6 A 10 1_555 B U 19 B O2 U 19 1_555 hydrog REVERSED HOOGSTEEN B A 10 B N7 A 10 1_555 B U 19 B N3 U 19 1_555 hydrog REVERSED WATSON-CRICK B A 10 B N1 A 10 1_555 B U 46 B N3 U 46 1_555 hydrog REVERSED WATSON-CRICK B A 10 B N6 A 10 1_555 B U 46 B O2 U 46 1_555 hydrog WATSON-CRICK B C 13 B N3 C 13 1_555 B G 45 B N1 G 45 1_555 hydrog WATSON-CRICK B C 13 B N4 C 13 1_555 B G 45 B O6 G 45 1_555 hydrog WATSON-CRICK B C 13 B O2 C 13 1_555 B G 45 B N2 G 45 1_555 hydrog WATSON-CRICK B C 14 B N3 C 14 1_555 B G 44 B N1 G 44 1_555 hydrog WATSON-CRICK B C 14 B N4 C 14 1_555 B G 44 B O6 G 44 1_555 hydrog WATSON-CRICK B C 14 B O2 C 14 1_555 B G 44 B N2 G 44 1_555 hydrog G-G MISPAIR B G 15 B N2 G 15 1_555 B G 73 B N3 G 73 1_555 hydrog REVERSED HOOGSTEEN B A 17 B N6 A 17 1_555 B U 71 B O2 U 71 1_555 hydrog REVERSED HOOGSTEEN B A 17 B N7 A 17 1_555 B U 71 B N3 U 71 1_555 hydrog A-G MISPAIR B A 18 B N3 A 18 1_555 B G 45 B N2 G 45 1_555 hydrog TYPE_5_PAIR B A 18 B N6 A 18 1_555 B A 70 B N1 A 70 1_555 hydrog TYPE_5_PAIR B A 18 B N7 A 18 1_555 B A 70 B N6 A 70 1_555 hydrog WATSON-CRICK B U 20 B N3 U 20 1_555 B A 39 B N1 A 39 1_555 hydrog WATSON-CRICK B U 20 B O4 U 20 1_555 B A 39 B N6 A 39 1_555 hydrog WATSON-CRICK B G 22 B N1 G 22 1_555 B C 38 B N3 C 38 1_555 hydrog WATSON-CRICK B G 22 B N2 G 22 1_555 B C 38 B O2 C 38 1_555 hydrog WATSON-CRICK B G 22 B O6 G 22 1_555 B C 38 B N4 C 38 1_555 hydrog WATSON-CRICK B C 23 B N3 C 23 1_555 B G 37 B N1 G 37 1_555 hydrog WATSON-CRICK B C 23 B N4 C 23 1_555 B G 37 B O6 G 37 1_555 hydrog WATSON-CRICK B C 23 B O2 C 23 1_555 B G 37 B N2 G 37 1_555 hydrog WATSON-CRICK B G 24 B N1 G 24 1_555 B C 36 B N3 C 36 1_555 hydrog WATSON-CRICK B G 24 B N2 G 24 1_555 B C 36 B O2 C 36 1_555 hydrog WATSON-CRICK B G 24 B O6 G 24 1_555 B C 36 B N4 C 36 1_555 hydrog WATSON-CRICK B U 25 B N3 U 25 1_555 B A 35 B N1 A 35 1_555 hydrog WATSON-CRICK B U 25 B O4 U 25 1_555 B A 35 B N6 A 35 1_555 hydrog WATSON-CRICK B G 26 B N1 G 26 1_555 B C 34 B N3 C 34 1_555 hydrog WATSON-CRICK B G 26 B N2 G 26 1_555 B C 34 B O2 C 34 1_555 hydrog WATSON-CRICK B G 26 B O6 G 26 1_555 B C 34 B N4 C 34 1_555 hydrog TYPE_5_PAIR B A 28 B N1 A 28 1_555 B A 61 B N6 A 61 1_555 hydrog TYPE_5_PAIR B A 28 B N6 A 28 1_555 B A 61 B N7 A 61 1_555 hydrog U-G MISPAIR B U 29 B O2 U 29 1_555 B G 32 B N2 G 32 1_555 hydrog REVERSED HOOGSTEEN B U 29 B N3 U 29 1_555 B A 60 B N7 A 60 1_555 hydrog REVERSED HOOGSTEEN B U 29 B O2 U 29 1_555 B A 60 B N6 A 60 1_555 hydrog TYPE_5_PAIR B A 30 B N6 A 30 1_555 B A 59 B N1 A 59 1_555 hydrog TYPE_5_PAIR B A 30 B N7 A 30 1_555 B A 59 B N6 A 59 1_555 hydrog WATSON-CRICK B G 32 B N1 G 32 1_555 B C 56 B N3 C 56 1_555 hydrog WATSON-CRICK B G 32 B N2 G 32 1_555 B C 56 B O2 C 56 1_555 hydrog WATSON-CRICK B G 32 B O6 G 32 1_555 B C 56 B N4 C 56 1_555 hydrog WATSON-CRICK B G 33 B N1 G 33 1_555 B C 55 B N3 C 55 1_555 hydrog WATSON-CRICK B G 33 B N2 G 33 1_555 B C 55 B O2 C 55 1_555 hydrog WATSON-CRICK B G 33 B O6 G 33 1_555 B C 55 B N4 C 55 1_555 hydrog TYPE_10_PAIR B G 33 B N2 G 33 1_555 B A 61 B N1 A 61 1_555 hydrog TYPE_10_PAIR B G 33 B N3 G 33 1_555 B A 61 B N6 A 61 1_555 hydrog G-U MISPAIR B G 40 B N2 G 40 1_555 B U 46 B O4 U 46 1_555 hydrog C-U MISPAIR B C 42 B N4 C 42 1_555 B U 74 B O2 U 74 1_555 hydrog WATSON-CRICK B G 47 B N1 G 47 1_555 B C 69 B N3 C 69 1_555 hydrog WATSON-CRICK B G 47 B N2 G 47 1_555 B C 69 B O2 C 69 1_555 hydrog WATSON-CRICK B G 47 B O6 G 47 1_555 B C 69 B N4 C 69 1_555 hydrog WATSON-CRICK B U 49 B N3 U 49 1_555 B A 68 B N1 A 68 1_555 hydrog WATSON-CRICK B U 49 B O4 U 49 1_555 B A 68 B N6 A 68 1_555 hydrog WATSON-CRICK B G 50 B N1 G 50 1_555 B C 67 B N3 C 67 1_555 hydrog WATSON-CRICK B G 50 B N2 G 50 1_555 B C 67 B O2 C 67 1_555 hydrog WATSON-CRICK B G 50 B O6 G 50 1_555 B C 67 B N4 C 67 1_555 hydrog WATSON-CRICK B G 51 B N1 G 51 1_555 B C 66 B N3 C 66 1_555 hydrog WATSON-CRICK B G 51 B N2 G 51 1_555 B C 66 B O2 C 66 1_555 hydrog WATSON-CRICK B G 51 B O6 G 51 1_555 B C 66 B N4 C 66 1_555 hydrog WATSON-CRICK B G 52 B N1 G 52 1_555 B C 65 B N3 C 65 1_555 hydrog WATSON-CRICK B G 52 B N2 G 52 1_555 B C 65 B O2 C 65 1_555 hydrog WATSON-CRICK B G 52 B O6 G 52 1_555 B C 65 B N4 C 65 1_555 hydrog WATSON-CRICK B C 53 B N3 C 53 1_555 B G 63 B N1 G 63 1_555 hydrog WATSON-CRICK B C 53 B N4 C 53 1_555 B G 63 B O6 G 63 1_555 hydrog WATSON-CRICK B C 53 B O2 C 53 1_555 B G 63 B N2 G 63 1_555 hydrog C-A MISPAIR B C 56 B O2 C 56 1_555 B A 60 B N6 A 60 1_555 RNA aptamer, SELEX, dopamine, L-DOPA, riboswitch, RNA 12CI PDB 1 1 12CI 1 82 12CI 1 82 12CI A 1 1 82 1 82 12CI 1 82 12CI B 1 1 82 4 P 1 21 1 P 2yb