Supercomplex for electron transfer

2026-08-12 REL PDBj INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY em_admin pdbx_entry_details pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_nonpoly_atom_coordination_sphere pdbx_nonpoly_atom_coordination_sphere_order _em_admin.last_update _pdbx_entry_details.has_protein_modification PDBj PDBj 2019-07-15 2020-02-12 2020-02-12 2026-08-12 Ministry of Science and Technology (China) 2017YFA0503702 China Ministry of Science and Technology (China) 2017YFA0504700 China Ministry of Science and Technology (China) 2016YFA0502900 China Chinese Academy of Sciences XDB08020302 China Chinese Academy of Sciences XDB08030204 China Chinese Academy of Sciences XDB27020106 China Chinese Academy of Sciences QYZDB-SSW-SMC005 China National Natural Science Foundation of China 31770778 China National Natural Science Foundation of China 31600609 China Supercomplex for electron transfer Pan X Cao D Supercomplex, cyanobacteria, cyclic electron transport, ELECTRON TRANSPORT Pan X Cao D Xie F Xu F Su X Mi H Zhang X Li M Structural basis for electron transport mechanism of complex I-like photosynthetic NAD(P)H dehydrogenase. Nat Commun UK 11 610 610 2020 32001694 doi:10.1038/s41467-020-14456-0 2041-1723 EMD-9989 other EM volume 6khj FULLOVERLAP EMDB EMD-9990 associated EM volume

EMDB EMD-9989 other EM volume Cylic electron transfer supercomplex from cyanobacteria Cylic electron transfer supercomplex from cyanobacteria 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 Thermosynechococcus elongatus BP-1 NAD(P)H-quinone oxidoreductase subunit 1 Thermosynechococcus elongatus BP-1 BP-1 0.04056598399999999 1 LEVO MESGIDLQGQFISALQSLGLSHDLAKLLWLPLPMLMMLIVATVGVLVAVWLERKISAAVQQRIGPEYIGPLGILAPLADG LKLIFKEDVLPANSDRWLFTLGPAVVVIPVFLSYIIVPFGQNLLISNLAMGVFLWIALSSIAPIGLLMAGYASNNKYSLL GGLRAAAQSISYEIPLALAVLAVAMMSNGLGTVEIVEQQSQYGILSWNVWRQPIGFLVFWIAALAECERLPFDLPEAEEE LVAGYQTEYAGMKFALFYLGAYVNLVLSALLVSVLYFGGWSFPIPLETIANLLGVSETNPFLQIAFAVLGITMTLIKAYF FVFLAILLRWTVPRVRIDQLLDLGWKFLLPVGLVNLLLTAGLKLAFPVAFGG Q8DL32 7.1.1.- NAD(P)H-quinone oxidoreductase subunit 2 Thermosynechococcus elongatus BP-1 BP-1 0.055168542999999994 1 LEVO MDLVTLAGQLNAGTILPETILIVTLLVVLLADLIQGRQADRWTPYFAIVGLGGAIATMIPLWTQPATISFFGSFISDHLS LFFRGLIALSALGTILMSIRYVEQTGSSLGEFMTILLTATVGGMFIAGAQELVFIFVALETLSIASYLLTGYTKRDSRSN EAALKYLLIGAASSAIFLYGSSLLYGLSGGHTQLPAIAQALSSESLGLVVALVFVIAGISFKISAVPFHQWTPDVYEGAP TPVVAFLSVGSKAAGFALAIRFLTLAFPSVTDQWQLIFTVLAILSMILGNVVALAQTSMKRMLAYSSIGQAGFVMIGFVV GTEAGYASMLFYLLVYLFMNLGAFTCVILFSLRTGTDQISEYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFW AGWQAGAYGLVLLGLLTSVISIYYYIRVVKMMVVKEPQEMSEAVRNYPEVSWSSFGLRPLQVGLVMTVIATSLAGILANP LFNLVNTAVWDVPQLANQPTVMEVAYQALSPAGKS Q8DMR6 7.1.1.- NAD(P)H-quinone oxidoreductase subunit 3 Thermosynechococcus elongatus BP-1 BP-1 0.015013918999999999 1 LEVO MVAIPRLRDTATVFVLSGYEYFLGFLIICSLVPVLALAASALLRPKSGRMIRLTTYESGMEPIGGAWIQFNVRYYMFALV FVIFDVETVFLYPWAVAFHQLGLLAFIEALIFIAILVVALVYAWRKRALEWS Q8DJ02 7.1.1.- NAD(P)H-quinone oxidoreductase chain 4 1 Thermosynechococcus elongatus BP-1 BP-1 0.057847504 1 LEVO MSTFPWLTTIILFPIVAALAIPFIPDPTGKGRPIRWYALAVGLIDFALIVYAFTNFYDLNTPGMQLWESYDWIPEIGLRW SVGADGLSMPLILLTGFITTLAILAAWPVTLKPRLFYFLMLAMYGGQIAVFAVQDMLVFFLAWELELIPVYLLLAIWGGH KRQYAATKFILYTAGSSLFILVAGLAMAFYGDTVSFDMQTLAAKDYALGFQLLVYAGFLVAYGVKLPIVPLHTWLPDAHG EATAPVHMLLAGILLKMGGYALIRMNVDMLPAAHAKFAPVLVILGVVNIIYAALTSYAQRNLKRKIAYSSISHIGFVLIG IASFTNLGMSGAVLQMVSHGLIGASLFFLVGATYDRTHTLILEEMGGVGQKMKKIFAMFTACSLASLALPGMSGFVAELM VFIGFATSDAYSLPFRVIVVFLAAVGVILTPIYLLSMLREIFYGPENKELVEHEALVDAEPREVFIIACLLVPIIGIGLY PKLLTQIYDATTGQVIARAREVLPTLAQQTEQPLGILPMVAPQLKANAQ Q8DKY0 7.1.1.- NAD(P)H-quinone oxidoreductase subunit 4L Thermosynechococcus elongatus BP-1 BP-1 0.011140264999999998 1 LEVO MQLTYVLILAALLFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLIGFANYLDGQQIKGQVFAVFVITVAAAEAAVGLAI ILAIYRNRDTVDMEKFNLLKW Q8DL29 7.1.1.- NADH dehydrogenase subunit 5 Thermosynechococcus elongatus BP-1 BP-1 0.072025352 1 LEVO MEPLYQYAWLIPVLPLLGALIVGFGLIAFSETTSKLRRPSAIFIMALMAIAMGHSLTLFWSQVQGHLPYTQMIEWAAAGN LHIAMGYVIDPLAALMLVIVTTVAFLVMLYSDGYMAHDPGYVRFFAYLSLFGSSMLGLVVSPNLVQVYIFWELVGMCSYL LIGFWYDRKSAAEAAQKAFVTNRVGDFGLLLGMVGLFWATGTFDFAGMGDRLTELVNTGLLSPSLAAILAILVFLGPVAK SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLIARMFPVFEQLPQVMTTIAWTGAFTAFMGATIAITQNDIKKSLA YSTISQLGYMVMGMGVGAYSAGLFHLMTHAYFKAMLFLGSGSVIHSMEGVVGHNPDLAQDMRYMGGLRKYMPITGATFLV GCLAISGVPPFAGFWSKDEILGAVFHANPAMWLLTWLTAGLTAFYMFRMYFMTFEGKFRNVPPERQEHHDHHSHHAAVPH ESPWTMTLPLVVLAIPSTLIGFVGTPFNNLFEVFIHAPGEEKVAEHAVDLTEFLILGGSSVGIGLMGITVAYLMYLKGTP SPQAIAKAIQPLYQFSLHKWYFDELYEAVFIKGCRRLARQVLEVDYNVVDGVVNLTGFVTMVTGEGLKYLQNGRAQFYAL IVLLAVLGFVIFSVQT Q8DKX9 NADH-quinone oxidoreductase subunit J Thermosynechococcus elongatus BP-1 BP-1 0.021580567999999998 1 LEVO MDLATLTQTITFFALAAAVIIAALGVVLLDNVVYSAFLLGGVFLSIAGLYILMNADFVSAAQILIYVGAVNVLILFAIML VNKRETYTPVPGRWLRQGGAAVVSLGVFALLTKMILQTPWQLSSVPPTPDSITTIGQHFFSDFLLPFELASVLLLMALIG AVVLARRELVLEPEPILGEEVVPPLELPERPREPVALSEK Q8DL30 7.1.1.- NAD(P)H-quinone oxidoreductase subunit H Thermosynechococcus elongatus BP-1 BP-1 0.045271184 1 LEVO MPKIETRTEPMVINMGPHHPSMHGVLRLMVTLDGEDVIDCEPVIGYLHRGMEKIAENRTNIMFIPYVSRWDYAAGMFNEA VTVNAPEKLAGIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREYIYDLFEAATGMRFINNNYFR IGGVAADLTYGWVTKCRDFCDYFLPKVDEYERLITNNPIFVRRLQGVGKISREEAINWGLSGPMLRASGVKWDLRKVDHY ECYDDFDWDVPVATEGDCLARYIVRIQEMRESVKIIRQALDGLPGGPYENLEAKRMLEGAKSEWNGFDYQYIGKKLSPTF KIPKGEHYVRVESGKGELGIYLIGDDNVFPWRWKIRPPDFNNLQVLPQLLKGMKVADIVAILGSIDVIMGSVDR Q8DJD9 7.1.1.- NAD(P)H-quinone oxidoreductase subunit I Thermosynechococcus elongatus BP-1 BP-1 0.022444800999999997 1 LEVO MKFLNQITNYAKEAVQSAKYIGQGLSVTFDHMRRRPITVQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPINLPVV DWVFNKELKKKELKHYSIDFGVCIFCANCVEYCPTNCLSVTEEYELATYDRHELNYDSVAMGRIPYKVTQDPMVTPIREF AYLPAGVMSGHDLPAGAQRAGERPEAIANTAKSSEN Q8DL31 7.1.1.- NAD(P)H-quinone oxidoreductase subunit J Thermosynechococcus elongatus BP-1 BP-1 0.019363789 1 LEVO MSDTPEAPIVEAGPVGRLLQSQNLSVESLGRDASGVEMIKVDRDRLLAVCQTLYADGFNYLRCQAAYDSGPGQDLVSTYH LIKLSDNADRPPEVRIKVFVPRDDPRVPSVYWIWKTADWQERESYDMFGIVYEGHPNLKRILMPEDWVGWPLRKDYITPD FYELQEAY Q8DJ01 7.1.1.- NAD(P)H-quinone oxidoreductase subunit K Thermosynechococcus elongatus BP-1 BP-1 0.025766998 1 LEVO MTNTTSPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMIGSRFDFDRFGLVPRNSPRQ ADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTITGGMFSSDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIV KLRKKIANEHINERGNLAQTHRLFTAKHKMKPVPPILTGQYLNAPSRQAPPPALAAAMGIAVPALGEAVSETTSVAE Q8DKZ4 7.1.1.- NAD(P)H-quinone oxidoreductase subunit L Thermosynechococcus elongatus BP-1 BP-1 0.008575137 1 LEVO MAVSTELLVLGVYGALAGLYLLVVPAIVYAYLNARWYVASSFERAFMYFLVTFFFPGLLLLAPFINFRPQPRSLNS Q8DKZ3 7.1.1.- NAD(P)H-quinone oxidoreductase subunit M Thermosynechococcus elongatus BP-1 BP-1 0.012584056 1 LEVO MLLKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHF IRSLLMQGEIGYNLNSRVRNYSLGIPRVNHS Q8DLN5 7.1.1.- NAD(P)H-quinone oxidoreductase subunit N Thermosynechococcus elongatus BP-1 BP-1 0.016656182 1 LEVO MGLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDIRVYFQ PPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLADWVAAA Q8DJU2 7.1.1.- NAD(P)H-quinone oxidoreductase subunit O Thermosynechococcus elongatus BP-1 BP-1 0.007877076 1 LEVO MAIKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFPVPTPTVWLRLDQLEVAQ Q8DMU4 7.1.1.- proton-translocating NADH-quinone dehydrogenase subunit P Thermosynechococcus elongatus BP-1 BP-1 0.0048786490000000005 1 LEVO MDAVISVKPILLAMTPVFILLCLFFGTRNGFYDTDQYHGNGSAH proton-translocating NADH-quinone dehydrogenase subunit Q Thermosynechococcus elongatus BP-1 BP-1 0.004858724 1 LEVO MATDFNRGIMKFDGADSPAMIAISAVLILGFIAALIWWALHTAYA Tlr0636 protein Thermosynechococcus elongatus BP-1 BP-1 0.012462558999999998 1 LEVO MIRPIADTYPLLPLSKAQMGQRQEIINSHKRLWDKTMATDLIMTILPGMTVKVTNPNDTYYQFQGIVQRITDGKVAVLFE GGNWDKLVTFQASELEPVVVTPKEKAKAKK Q8DL61 DIGALACTOSYL DIACYL GLYCEROL (DGDG) 0.0009492989999999999 2 DGD 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE 0.000749201 1 PL9 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL 0.0007951159999999999 3 SQD 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE 0.00072297 6 LHG BETA-CAROTENE 0.000536873 2 BCR DODECYL-BETA-D-MALTOSIDE 0.000510615 1 LMT 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE 0.0007871579999999999 2 LMG IRON/SULFUR CLUSTER 0.00035163999999999996 3 SF4 singleParticle particle 7.0 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 60.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.0 FSC 0.143 CUT-OFF 187788 PROJECTION MATCHING PROJECTION MATCHING emd_9990.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 -200 -200 -200 400 400 400 416.0 416.0 416.0 90.0 90.0 90.0 X Y Z -0.137655 0.38314354 0.0003497507 0.007646633 1.04 1.04 1.04 0.06 AUTHOR ::::EMDATABANK.org::::EMD-9990::::