2026-08-12 REL PDBj INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update DERIVED_CALCULATIONS atom_site pdbx_nonpoly_scheme pdbx_struct_conn_angle pdbx_unobs_or_zero_occ_atoms pdbx_validate_chiral struct_asym struct_conn struct_site struct_site_gen _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.details _struct_asym.entity_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_site.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_num_residues _struct_site_gen.auth_asym_id _struct_site_gen.auth_comp_id _struct_site_gen.auth_seq_id _struct_site_gen.label_asym_id _struct_site_gen.label_comp_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_num_res _struct_site_gen.site_id STRUCTURE_SUMMARY chem_comp chem_comp_atom chem_comp_bond database_2 em_admin pdbx_entry_details pdbx_modification_feature pdbx_struct_conn_angle pdbx_validate_chiral struct_conn _chem_comp.formula _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _em_admin.last_update _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY chem_comp_atom em_admin pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_struct_conn_angle pdbx_validate_chiral struct_conn _chem_comp_atom.pdbx_stereo_config _em_admin.last_update PDBj PDBj 2018-10-10 2018-06-20 2018-06-20 2026-08-12 Ministry of Science and Technology (China) 2017YFA0503702 China Ministry of Science and Technology (China) 2017YFA0504700 China Ministry of Science and Technology (China) 2016YFA0502900 China Chinese Academy of Sciences XDB08020302 China Chinese Academy of Sciences XDB08030204 China Chinese Academy of Sciences XDB27020106 China Chinese Academy of Sciences QYZDB-SSW-SMC005 China National Natural Science Foundation of China 31770778 China National Natural Science Foundation of China 31700649 China National Natural Science Foundation of China 31600609 China Pan X Ma J Photosystem, Antenna, green alga, MEMBRANE PROTEIN Su X Ma J Pan X Zhao X Chang W Liu Z Zhang X Li M Nat Plants UK 5 273 281 2019 30850819 doi:10.1038/s41477-019-0380-5 2055-0278 6ijj FULLOVERLAP EMDB EMD-9678 associated EM volume

Photosystem of green alga.

Chlamydomonas reinhardtii PSI with eight light harvesting antennae Chlamydomonas reinhardtii PSI with eight light harvesting antennae 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 Chlamydomonas reinhardtii PsaA Chlamydomonas reinhardtii 0.08323920299999998 1 LEVO MTISTPEREAKKVKIAVDRNPVETSFEKWAKPGHFSRTLSKGPNTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQ LGIIFIWLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGFQGIQITSGFFQLWRASGITSELQLY TTAIGGLVMAAAMFFAGWFHYHKAAPKLEWFQNVESMLNHHLGGLLGLGSLAWAGHQIHVSLPVNKLLDAGVDPKEIPLP HDLLLNRAIMADLYPSFAKGIAPFFTLNWSEYSDFLTFKGGLNPVTGGLWLSDTAHHHVAIAVLFLVAGHMYRTNWGIGH SMKEILEAHRGPFTGEGHVGLYEILTTSWHAQLAINLALFGSLSIIVAHHMYAMPPYPYLATDYGTQLSLFTHHTWIGGF CIVGAGAHAAIFMVRDYDPTNNYNNLLDRVIRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQ PVFAQWIQNTHFLAPQLTAPNALAATSLTWGGDLVAVGGKVAMMPISLGTSDFMVHHIHAFTIHVTVLILLKGVLFARSS RLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSLSIVIFHFSWKMQSDVWGTVTASGVSHITGGNFAQSAN TINGWLRDFLWAQSSQVIQSYGSALSAYGLIFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSI TQGRAVGVAHYLLGGIATTWSFFLARIISVG PsaB Chlamydomonas reinhardtii 0.082184266 1 LEVO MATKLFPKFSQGLAQDPTTRRIWYGLAMAHDFESHDGMTEENLYQKIFASHFGQLSIIFLWTSGNLFHVAWQGNFEQWVT DPVHIRPIAHAIWDPHFGQPAVEAFTRGGASGPVNISTSGVYQWWYTIGMRTNQDLYVGSVFLALVSAIFLFAGWLHLQP NFQPSLSWFKDAESRLNHHLSGLFGVSSLAWTGHLVHVAIPESRGQHVGWDNFLSVLPHPQGLTPFFTGNWAAYAQSPDT ASHVFGTAQGSGQAILTFLGGFHPQTQSLWLTDMAHHHLAIAVIFIVAGHMYRTNFGIGHRMQAILEAHTPPSGSLGAGH KGLFDTVNNSLHFQLGLALASVGTITSLVAQHMYSLPPYAFQAIDFTTQAALYTHHQYIAGFIMCGAFAHGAIFFIRDYD PEQNKGNVLARMLDHKEALISHLSWVSLFLGFHTLGLYVHNDVMQAFGTPEKQILIEPVFAQWIQAAHGKALYGFDFLLS SKTSAAFANGQSLWLPGWLDAINNNQNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPC DGPGRGGTCDISAYDAFYLAVFWMLNTIGWVTFYWHWKHLTLWQGNVAQFDESSTYLMGWLRDYLWLNSSQLINGYNPFG MNSLSVWAWTFLFGHLIYATGFMFLISWRGYWQELIETLVWAHEKTPLANLVYWKDKPVALSIVQARLVGLAHFSVGYIF TYAAFLIASTSGRFG PsaC Chlamydomonas reinhardtii 0.008869325 1 LEVO MAHIVKIYDTCIGCTQCVRACPLDVLEMVPWDGCKASQMASAPRTEDCVGCKRCETACPTDFLSVRVYLGSESTRSMGLS Y PsaD Chlamydomonas reinhardtii 0.021372886999999997 1 LEVO MAVMMRTQAPAATRASSRVAVAARPAARRAVVVRAEAEAAPAAAKKAAEKPAWTVPTLNPDTPSPIFGGSTGGLLRKAQT EEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGKKEQCLALTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEK VNAGRVGANQNMRRIGQNVNPIKVKFSGRMMSPAEI PsaE Chlamydomonas reinhardtii 0.016221703 1 LEVO MVYAIPHVLCVDTTACHEWYQRRVHGGFQPRPRVTLRLSSPHQNRKMQALSSRVNIAAKPQRAQRLVVRAEEVKAAPKKE VGPKRGSLVKILRPESYWFNQVGKVVSVDQSGVRYPVVVRFENQNYAGVTTNNYALDEVVAAK PsaF Chlamydomonas reinhardtii 0.024088936000000002 1 LEVO MALTMRNPAVKASSRVAPSSRRALRVACQAQKNETASKVGTALAASALAAAVSLSAPSAAMADIAGLTPCSESKAYAKLE KKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVA GYIGYVGRQYLIAVKGEAKPTDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKEENITVSPR PsaI Chlamydomonas reinhardtii 0.010586388 1 LEVO MALRAVSAKSAVRPTVARASVKPVAALKPAQKMALAGAASVALLAASSSSAEASQVIATVASAAQGYPFVPPSWAPSVFV PLTGLVLPAIAMATLFVYIEKEAPSS PsaJ Chlamydomonas reinhardtii 0.004750509 1 LEVO MKDFTTYLSTAPVIATIWFTFTAGLLIEINRYFPDPLVFSF PsaK Chlamydomonas reinhardtii 0.016412221 1 LEVO PRCICKMTARQSRISHCPLRAFASSCTNLVHTCPRLSSITSIYQPATMQALATRPSAIRPTKAARRSSVVVRADGFIGSS TNLIMVASTTATLAAARFGLAPTVKKNTTAGLKLVDSKNSAGVISNDPAGFTIVDVLAMGAAGHGLGVGIVLGLKGIGAL PsaL Chlamydomonas reinhardtii 0.027203562 1 LEVO MPTKGSPLTGLITWAFLVSAAHTRTVDTRPRPRGIWRRAAVARRPVEERIATGSSLAHTYHKMAVAMRSSTGLRATAARR QMPLGLGRVSTVRVCAADTKKAQVISPVNGDPFVGMLETPVTSAPIVATYLSNLPAYRTGVAPVLRGVEIGLAHGFLLAG PFIKLGPLRNVPETAEIAGSLSAAGLVLILALCLSIYGSAQFQSTPSIGVKTLSGRSVARDPLFSADGWSEFAAGFLVGG EAGVAWAYVCTQILPYYS Lhca1 Chlamydomonas reinhardtii 0.026135863 2 LEVO MGELSRADSLLRTITKPPIKMALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD PLSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELLGYGNWYDAPLWAVNGGKATWFGIEVPFDLNALLAFEFVAMAA AEGQRGDAGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANPWGANFAT NGISVPFF Lhca3 Chlamydomonas reinhardtii 0.032629486 1 LEVO MMLTKSAQAAFSGKVARPAKANRARLVCRAEEKSIAKVDRSKDQLYVGASQSSLAYLDGSLPGDFGFDPLGLLDPVNSGG FIEPKWLQYSEVIHARWAMLGAAGCIAPEVLGAAGLIPDATNIKWFESGVIPPAGSYNGYWADPYTIFFVEIVAMQFAEL RRLQDFRYPGSMGQQYFLGLEAIFKGSGDAAYPGGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVMTGK GPFQNLVEHLADPVNNNILTNFAGRVSGSSQPWRPHGWWRRRYRSVAALALIRNRSVC Lhca4 Chlamydomonas reinhardtii 0.03146201 1 LEVO MYSALIPLLSSGINAEYMGVSRCSGKMAFVLAKSSAFGVAAKPVSRRSSVAVKASAVPENVKEAREWIDAWKSKSGGAKR DAALPSWMPGADLPGYLNGTLPGDFGFDPLYLGQDPVKLKWYAQAELMNARFAMLAVAGILVPELLSNIGFSWPGAGVAW YDAGKFEYFAPASSLFGVQMLLFAWVEIRRYQDFVKPGSANQDPIFTNNKLPDGNEPGYPGGIFDPFGWSKGDIKSLKLK EIKNGRLAMLAFAGFIGQAYTTGTTPLKNLSTHLADPWSTTVWQNDLARL Lhca5 Chlamydomonas reinhardtii 0.03015165 1 LEVO AVAWFFTPGHTNHQPAKMAALMQKSALSRPACSTRSSRRAVVVRAAADRKLWAPGVVAPEYLKGDLAGDYGWDPLGLGAD PTALKWYRQSELQHARWAMLGVAGVLVQEIVKPDVYFYEAGLPQNLPEPFTNINMGGLLAWEFILMHWVEVRRWQDYKNF GSVNEDPIFKGNKVPNPEMGYPGGIFDPFGFSKGNLKELQTKEIKNGRLAMIAYMAFILQAQATGKGPLAALSAHLSNPF GNNILKNIGTCTVPHSVDVQGLTIPLTCLWPGSQ Lhca6 Chlamydomonas reinhardtii 0.035122043 1 LEVO MDIRREWEWCRVPHLQEPCNPGREKKKKKKKKKKYSALIPLLLSTQSTWGVFAKSHYTVPKMMLVAKNAVAARPSARSAR RSVVAKASSRPLWLPGSTPPAHLKGDLPGDFGFDPLGLGANAESLKWFKESELVHSRWAMAAVAGILVQEIVRPDVFWYN AGKEVESPLGPLGLLAVEFFLMHWVEVRRWQDLRKPGSVDQDPIFSQYKLPPHEVGYPGGVFAPFIPGDLAELKVKEIKN GRLAMLAFVGFVMAAQVTGKGPIAALQEHLADPWGTTIFSKAAVVPGQAVAPPCKIPASVSYKGIEIPTPCFLQGLWP Lhca7 Chlamydomonas reinhardtii 0.026248868999999998 1 LEVO MALSMIAQRRAGAFSARQAPRAVRAQAAVRPVWFPGNPPPAHLDGSLAGDYGFDPLFLGQEPQTLKWYVQAELVHGRFAM LGAAGIILTSIGAKVGLGFPEWYDAGKVVVEKNNIDFPTLMVIQFYLMGWAETKRWYDFKNPGSQADGSFLGFTEEFKGL ENGYPGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGKGPLDNLADHLADPNHVNFATNGVSIPI A Lhca8 Chlamydomonas reinhardtii 0.029178634999999998 1 LEVO GRQFAPRFLALCLCRCCLRTEHGPHSPATMALTMKRSGVAARSASSRKSVVTCVARQSWLPGSQIPAHLDTPAAQALAGN FGFDPLGLGKDPVALRWYQQAELIHCRTAMAGVAGILIPGLLTKAGALNVPEWYDAGKVAIENSFAPWGSLLAVQLFLCG FVEAKRWQDIRKPGSQGEPGSFLGFEASLKGTSELGYPGGPFDPLGLSKEADKWADWKLKEVKNGRLAMLAFLGFVAQKY ATGAGPVDNLAAHLKDPWHVNYATNGVSLPFL CHLOROPHYLL A 0.000893489 216 CLA PHYLLOQUINONE 0.000450696 2 PQN 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE 0.00072297 14 LHG BETA-CAROTENE 0.000536873 30 BCR IRON/SULFUR CLUSTER 0.00035163999999999996 3 SF4 DODECYL-ALPHA-D-MALTOSIDE 0.000510615 7 LMU 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE 0.0007871579999999999 7 LMG DIGALACTOSYL DIACYL GLYCEROL (DGDG) 0.0009492989999999999 2 DGD (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL 0.000568871 8 LUT (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL 0.00060087 8 XAT (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL 0.00060087 2 NEX singleParticle particle 7.5 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) COUNTING 60.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 2.89 FSC 0.143 CUT-OFF 58955 COMMON LINE COMMON LINE