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    <admin>
        <current_status>
            <date>2020-01-29</date>
            <code>REL</code>
            <processing_site>RCSB</processing_site>
        </current_status>
        <sites>
            <deposition>RCSB</deposition>
            <last_processing>RCSB</last_processing>
        </sites>
        <key_dates>
            <deposition>2017-08-11</deposition>
            <header_release>2017-09-06</header_release>
            <map_release>2017-12-06</map_release>
            <update>2020-01-29</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)</funding_body>
                <code>GM27681</code>
                <country>United States</country>
            </grant_reference>
        </grant_support>
        <title>RNA Pol II complex arrested by a CPD lesion</title>
        <authors_list>
            <author>Lahiri I</author>
            <author>Leschziner AE</author>
        </authors_list>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author order="1">Xu J</author>
                    <author order="2">Lahiri I</author>
                    <author order="3">Wang W</author>
                    <author order="4">Wier A</author>
                    <author order="5">Cianfrocco MA</author>
                    <author order="6">Chong J</author>
                    <author order="7">Hare AA</author>
                    <author order="8">Dervan PB</author>
                    <author order="9">DiMaio F</author>
                    <author order="10">Leschziner AE</author>
                    <author order="11">Wang D</author>
                    <title>Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.</title>
                    <journal_abbreviation>Nature</journal_abbreviation>
                    <country>UK</country>
                    <volume>551</volume>
                    <first_page>653</first_page>
                    <last_page>657</last_page>
                    <year>2017</year>
                    <external_references type="PUBMED">29168508</external_references>
                    <external_references type="DOI">doi:10.1038/nature24658</external_references>
                    <external_references type="ISSN">1476-4687</external_references>
                    <external_references type="CSD">0006</external_references>
                    <external_references type="ASTM">NATUAS</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <emdb_list>
            <emdb_reference>
                <emdb_id>EMD-8885</emdb_id>
                <relationship>
                    <other>associated EM volume</other>
                </relationship>
                <details>Binary complex of RNA Pol II and transcription scaffold</details>
            </emdb_reference>
        </emdb_list>
    </crossreferences>
    <sample>
        <name>Binary complex of RNA Pol II and transcription scaffold</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>Binary complex of RNA Pol II and transcription scaffold</name>
                <parent>0</parent>
                <natural_source database="NCBI">
                    <organism ncbi="559292">Saccharomyces cerevisiae (strain ATCC 204508 / S288c)</organism>
                    <strain>ATCC 204508 / S288c</strain>
                </natural_source>
            </complex_supramolecule>
        </supramolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
            <specimen_preparation_list>
                <single_particle_preparation preparation_id="1">
                    <buffer>
                        <ph>7.5</ph>
                    </buffer>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                        <chamber_humidity units="percentage">90</chamber_humidity>
                        <chamber_temperature units="K">277.15</chamber_temperature>
                        <instrument>FEI VITROBOT MARK IV</instrument>
                        <details></details>
                    </vitrification>
                </single_particle_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <single_particle_microscopy microscopy_id="1">
                    <microscope>FEI TALOS ARCTICA</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">200</acceleration_voltage>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>GATAN K2 SUMMIT (4k x 4k)</film_or_detector_model>
                            <detector_mode>SUPER-RESOLUTION</detector_mode>
                            <average_electron_dose_per_image units="e/Å^2">7.7</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </single_particle_microscopy>
            </microscopy_list>
            <singleparticle_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <startup_model type_of_model="PDB ENTRY">
                    <pdb_model>
                        <pdb_id>5VVR</pdb_id>
                    </pdb_model>
                </startup_model>
                <final_reconstruction>
                    <applied_symmetry>
                        <point_group>C1</point_group>
                    </applied_symmetry>
                    <resolution units="Å" res_type="BY AUTHOR">10.0</resolution>
                    <resolution_method>FSC 0.5 CUT-OFF</resolution_method>
                    <software_list>
                        <software>
                            <name>cryoSPARC</name>
                        </software>
                    </software_list>
                    <details>The particles contributing to the structure adopted a strong preferred orientation.</details>
                    <number_images_used>51119</number_images_used>
                </final_reconstruction>
                <initial_angle_assignment>
                    <type>PROJECTION MATCHING</type>
                    <projection_matching_processing/>
                </initial_angle_assignment>
                <final_angle_assignment>
                    <type>PROJECTION MATCHING</type>
                    <projection_matching_processing/>
                </final_angle_assignment>
            </singleparticle_processing>
        </structure_determination>
    </structure_determination_list>
    <map format="CCP4" size_kbytes="8389">
        <file>emd_8885.map.gz</file>
        <symmetry>
            <space_group>1</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
        <dimensions>
            <col>128</col>
            <row>128</row>
            <sec>128</sec>
        </dimensions>
        <origin>
            <col>0</col>
            <row>0</row>
            <sec>0</sec>
        </origin>
        <spacing>
            <x>128</x>
            <y>128</y>
            <z>128</z>
        </spacing>
        <cell>
            <a units="Å">460.8</a>
            <b units="Å">460.8</b>
            <c units="Å">460.8</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-0.9382218</minimum>
            <maximum>2.7755256</maximum>
            <average>-0.0071814493</average>
            <std>0.13135828</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">3.6</x>
            <y units="Å">3.6</y>
            <z units="Å">3.6</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <level>0.99</level>
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-8885::::</label>
        <annotation_details>RNA Pol II elongation complex with a CPD lesion containing scaffold</annotation_details>
    </map>
</emd>
