Structure of the major capsid protein and the capsid stabilizing protein of the marine siphovirus TW1

2024-03-13 REL RCSB RCSB RCSB 2017-07-24 2017-08-23 2018-01-17 2024-03-13 National Science Foundation (NSF, United States) MCB-1515260 United States Structure of the major capsid protein and the capsid stabilizing protein of the marine siphovirus TW1 Wang Z Rossmann MG Major Capsid Protein, Capsid Stabilizing Protein, HK 97 fold, Decoration Protein, VIRUS Wang Z Hardies SC Fokine A Klose T Jiang W Cho BC Rossmann MG Structure of the Marine Siphovirus TW1: Evolution of Capsid-Stabilizing Proteins and Tail Spikes. Structure UK 26 238 248.e3 2018 29290487 doi:10.1016/j.str.2017.12.001 1878-4186 2005 STRUE6 5wk1 FULLOVERLAP Pseudoalteromonas phage TW1 Pseudoalteromonas phage TW1 0 1 2 Pseudoalteromonas phage TW1 VIRION STRAIN false false Capsid Stabilizing Protein Pseudoalteromonas phage TW1 0.015017777 7 LEVO MANSKNSIFVGGAGRVKQTIEGLAQSAFKPGQLLARAAGDAIDVTAKASTTYGNEFLICDDQPQTLGGGTDVAVTAGDTV QAISVLPGQYVLLSFAATQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTTAGTLVLCRAI S5MS27 Major Capsid Protein Pseudoalteromonas phage TW1 0.039047965 7 LEVO MSIHFDFKNKQGKELLALNRQWNELSGYRAHAFNESVNMLNNVGETFGVNGANAMQTNMQRVDEMYRLVDSTGTGEDRDW GNQTLLGRLLSQAQTVSIGKKVIESRRYSEAGRINRSMSGQTDIDMDKTKSSYQKMVIPVFDGAYGRDFRDYEAMRSEML PALAEDSEEIEFTLLDDVNDYLWNGDAKLKVDTAVWGGLKADASVAAYSLGADLTTATEAQVVAELLALLDVLRITNKKS GPFELYISPQIMSNWQKLAGANTNGFMNIMAAVRALIPEFSVVEADSALQGNQVLCSVVGTRGLHAKIGMMMSSYQVPRV MHNDPYQFVKWFAAGFQSNNSFSGLKSTVYGS S5M825 singleParticle particle 7.5 50.0 C4H11NO3 Tris 100.0 NaCl sodium chloride 8.0 MgSO4 magnesium sulfate

50 mM Tris, pH 7.5, 100 mM NaCl, 8 mM MgSO4

Ted Pella Inc, Lacey Carbon 400 CONTINUOUS GLOW DISCHARGE 60 ETHANE 75 298 GATAN CRYOPLUNGE 3 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.5 2.0 22500.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN 80.0 80.0 DIRECT ELECTRON DE-16 (4k x 4k) COUNTING 20.0 1 16216 I 3.6 FSC 0.143 CUT-OFF jspr 8663 RANDOM ASSIGNMENT jspr PROJECTION MATCHING jspr emd_8854.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 1440 1440 1440 -720 -720 -720 1440 1440 1440 960.48 960.48 960.48 90.0 90.0 90.0 X Y Z -16.355609999999999 21.784884999999999 0.014140712 1.0399446 0.667 0.667 0.667 4.79 AUTHOR ::::EMDATABANK.org::::EMD-8854:::: icosahedral reconstruction of marine Siphophage TW1 head