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    <admin>
        <current_status>
            <date>2024-11-06</date>
            <code>REL</code>
            <processing_site>RCSB</processing_site>
        </current_status>
        <sites>
            <deposition>RCSB</deposition>
            <last_processing>RCSB</last_processing>
        </sites>
        <key_dates>
            <deposition>2016-11-18</deposition>
            <header_release>2016-06-22</header_release>
            <map_release>2016-06-22</map_release>
            <update>2024-11-06</update>
        </key_dates>
        <title>MicroED structure of a complex between monomeric TGF-b and its receptor, TbRII, at 2.9 A resolution</title>
        <authors_list>
            <author>Weiss SC</author>
            <author>de la Cruz MJ</author>
        </authors_list>
        <keywords>TRANSFERASE</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author order="1">de la Cruz MJ</author>
                    <author order="2">Hattne J</author>
                    <author order="3">Shi D</author>
                    <author order="4">Seidler P</author>
                    <author order="5">Rodriguez J</author>
                    <author order="6">Reyes FE</author>
                    <author order="7">Sawaya MR</author>
                    <author order="8">Cascio D</author>
                    <author order="9">Weiss SC</author>
                    <author order="10">Kim SK</author>
                    <author order="11">Hinck CS</author>
                    <author order="12">Hinck AP</author>
                    <author order="13">Calero G</author>
                    <author order="14">Eisenberg D</author>
                    <author order="15">Gonen T</author>
                    <title>Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.</title>
                    <journal_abbreviation>Nat. Methods</journal_abbreviation>
                    <country>US</country>
                    <volume>14</volume>
                    <first_page>399</first_page>
                    <last_page>402</last_page>
                    <year>2017</year>
                    <external_references type="PUBMED">28192420</external_references>
                    <external_references type="DOI">doi:10.1038/nmeth.4178</external_references>
                    <external_references type="ISSN">1548-7105</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <emdb_list>
            <emdb_reference>
                <emdb_id>EMD-8216</emdb_id>
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                    <other>other EM volume</other>
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            </emdb_reference>
            <emdb_reference>
                <emdb_id>EMD-8217</emdb_id>
                <relationship>
                    <other>other EM volume</other>
                </relationship>
            </emdb_reference>
            <emdb_reference>
                <emdb_id>EMD-8218</emdb_id>
                <relationship>
                    <other>other EM volume</other>
                </relationship>
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            <emdb_reference>
                <emdb_id>EMD-8219</emdb_id>
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                    <other>other EM volume</other>
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                    <other>other EM volume</other>
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                <pdb_id>5ty4</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
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        </pdb_list>
    </crossreferences>
    <sample>
        <name>Complex between monomeric TGF-b and its receptor, TbRII</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>Complex between monomeric TGF-b and its receptor, TbRII</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>2</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.019072</theoretical>
                </molecular_weight>
            </complex_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>TGF-beta receptor type-2</name>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.011788518999999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="562">Escherichia coli</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>FPQLCKFCDVRFSTCDNQKSCMSNCSITSICEKPQEVCVAVWRKNDENITLETVCHDPKLPYHDFILEDAASPTCIMKEK
KKPGETFFMCSCSSDECNDNIIF</string>
                    <external_references type="UNIPROTKB">P37173</external_references>
                </sequence>
                <ec_number>2.7.11.30</ec_number>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="2">
                <name>mmTGF-b2-7m</name>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.011076813</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="562">Escherichia coli</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>CCLRPLYIDFRKDLGWKWIHEPKGYNANFCAGACPYLWSSDTQHSRVLSLYNTINPEASASPCCVSQDLEPLTIVYYVGR
KPKVEQLSNMIVKSCKC</string>
                </sequence>
            </protein_or_peptide>
        </macromolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>electronCrystallography</method>
            <aggregation_state>threeDArray</aggregation_state>
            <specimen_preparation_list>
                <crystallography_preparation preparation_id="1">
                    <buffer>
                        <ph>7.5</ph>
                        <component>
                            <concentration units="mM">100.0</concentration>
                            <name>HEPES</name>
                        </component>
                    </buffer>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                    </vitrification>
                </crystallography_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <crystallography_microscopy microscopy_id="1">
                    <microscope>FEI TECNAI F20</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>DIFFRACTION</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">200</acceleration_voltage>
                    <cooling_holder_cryogen>NITROGEN</cooling_holder_cryogen>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>TVIPS TEMCAM-F416 (4k x 4k)</film_or_detector_model>
                            <digitization_details>
                                <dimensions>
                                    <width units="pixel">2048</width>
                                    <height units="pixel">2048</height>
                                </dimensions>
                            </digitization_details>
                            <number_grids_imaged>2</number_grids_imaged>
                            <number_real_images>353</number_real_images>
                            <number_diffraction_images>353</number_diffraction_images>
                            <average_exposure_time units="s">4.1</average_exposure_time>
                            <average_electron_dose_per_image units="e/Å^2">0.004</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                    <camera_length units="mm">2000</camera_length>
                </crystallography_microscopy>
            </microscopy_list>
            <crystallography_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <final_reconstruction>
                    <resolution units="Å" res_type="BY AUTHOR">2.9</resolution>
                    <resolution_method>DIFFRACTION PATTERN/LAYERLINES</resolution_method>
                </final_reconstruction>
                <molecular_replacement>
                    <software_list>
                        <software>
                            <name>Phaser</name>
                            <version>2.6.0</version>
                        </software>
                    </software_list>
                </molecular_replacement>
                <symmetry_determination_software_list>
                    <software>
                        <name>POINTLESS</name>
                        <version>1.10.26</version>
                    </software>
                </symmetry_determination_software_list>
                <merging_software_list>
                    <software>
                        <name>AIMLESS</name>
                        <version>0.5.27</version>
                    </software>
                </merging_software_list>
                <crystallography_statistics>
                    <number_intensities_measured>14911</number_intensities_measured>
                    <number_structure_factors>3884</number_structure_factors>
                    <fourier_space_coverage>71.900000000000006</fourier_space_coverage>
                    <r_sym>0.293</r_sym>
                    <r_merge>0.293</r_merge>
                    <overall_phase_error>30.99</overall_phase_error>
                    <overall_phase_residual>43.530000000000001</overall_phase_residual>
                    <phase_error_rejection_criteria>0</phase_error_rejection_criteria>
                    <high_resolution units="Å">2.9</high_resolution>
                    <shell_list>
                        <shell shell_id="1">
                            <high_resolution units="Å">2.9</high_resolution>
                            <low_resolution units="Å">3.65</low_resolution>
                            <number_structure_factors>1884</number_structure_factors>
                            <phase_residual>46.399999999999999</phase_residual>
                            <fourier_space_coverage>69.099999999999994</fourier_space_coverage>
                            <multiplicity>3.9</multiplicity>
                        </shell>
                    </shell_list>
                </crystallography_statistics>
            </crystallography_processing>
        </structure_determination>
    </structure_determination_list>
    <map format="CCP4" size_kbytes="867">
        <file>emd_8472.map.gz</file>
        <symmetry>
            <space_group>19</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
        <dimensions>
            <col>85</col>
            <row>52</row>
            <sec>49</sec>
        </dimensions>
        <origin>
            <col>-26</col>
            <row>-34</row>
            <sec>-36</sec>
        </origin>
        <spacing>
            <x>44</x>
            <y>76</y>
            <z>84</z>
        </spacing>
        <cell>
            <a units="Å">41.5298</a>
            <b units="Å">71.3297</b>
            <c units="Å">79.5082</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>Y</fast>
            <medium>X</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-0.044779353</minimum>
            <maximum>0.067389965</maximum>
            <average>-0.0000074777117</average>
            <std>0.008660839</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">0.9438591</x>
            <y units="Å">0.9385486</y>
            <z units="Å">0.9465262</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <level>0.01299</level>
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-8472::::</label>
        <annotation_details>Complex between monomeric TGF-b and its receptor, TbRII</annotation_details>
    </map>
    <interpretation>
        <modelling_list>
            <modelling>
                <refinement_protocol>OTHER</refinement_protocol>
                <refinement_space>RECIPROCAL</refinement_space>
            </modelling>
        </modelling_list>
    </interpretation>
</emd>
