2024-05-29 REL PDBj RCSB PDBj 2016-04-22 2016-05-18 2016-05-18 2024-05-29 National Natural Science Foundation 81172885 China National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R37-GM33050 United States Cryo-EM structure of Human Papillomavirus Type 59 L1 Virus-like Particle Li ZH Yan XD Capsid, T=7 icosahedral, Virus-like Particle, VIRUS Li Z Yan X Yu H Wang D Song S Li Y He M Hong Q Zheng Q Zhao Q Gu Y Zhang J Janssen ME Cardone G Olson NH Baker TS Li S Xia N The C-Terminal Arm of the Human Papillomavirus Major Capsid Protein Is Immunogenic and Involved in Virus-Host Interaction. Structure UK 24 874 885 2016 27276427 doi:10.1016/j.str.2016.04.008 0969-2126 2005 STRUE6 5jb1 FULLOVERLAP Human papillomavirus type 59 Human papillomavirus type 59 0 1 Human papillomavirus type 59 Homo sapiens 19.8 Capsid 580.0 7 VIRUS-LIKE PARTICLE SEROTYPE false true Major capsid protein L1 Human papillomavirus type 59 0.055978417999999995 6 Escherichia coli LEVO MKVYLPPPSVAKVVSTDEYVTRTSIFYHAGSSRLLTVGHPYFKVPKGGNGRQDVPKVSAYQYRVFRVKLPDPNKFGLPDN TVYDPNSQRLVWACVGVEIGRGQPLGVGLSGHPLYNKLDDTENSHVASAVDTKDTRDNVSVDYKQTQLCIIGCVPAIGEH WTKGTACKPTTVVQGDCPPLELINTPIEDGDMVDTGYGAMDFKLLQDNKSEVPLDICQSICKYPDYLQMSADAYGDSMFF CLRREQVFARHFWNRSGTMGDQLPESLYIKGTDIRANPGSYLYSPSPSGSVVTSDSQLFNKPYWLHKAQGLNNGICWHNQ LFLTVVDTTRSTNLSVCASTTSSIPNVYTPTSFKEYARHVEEFDLQFIFQLCKITLTTEVMSYIHNMNTTILEDWNFGVT PPPTASLVDTYRFVQSAAVTCQKDTAPPVKQDPYDKLKFWPVDLKERFSADLDQFPLGRKFLLQLGARPKPTIGPRKRAA PAPTSTPSPKRVKRRKSSRK Q81971 singleParticle particle 5 7.3 8.0 NaCl sodium chloride 0.2 KCl potassium chloride 1.42 Na2HPO4 Disodium phosphate 0.24 KH2PO4 Monopotassium phosphate Quantifoil R2/2 COPPER GLOW DISCHARGE ETHANE 100 281 FEI VITROBOT MARK IV FEI TECNAI F30 OTHER BRIGHT FIELD FIELD EMISSION GUN 300 FEI FALCON I (4k x 4k) 25.0 1 6.0 OTHER Auto3DEM 4.05
The effective resolution was estimated based on the 0.5 criteria of FSC between the cryoEM structure and the final model derived from the density map.
3100 COMMON LINE PROJECTION MATCHING emd_8147.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 820 820 820 -410 -410 -410 820 820 820 910.2 910.2 910.2 90.0 90.0 90.0 X Y Z -6.758176 14.132822000000001 -0.00000000105093 1.0 1.11 1.11 1.11 4.25 AUTHOR None FLEXIBLE FIT Correlation coefficient REAL