2020-08-05 REL RCSB RCSB RCSB 2018-05-29 2019-01-16 2019-01-16 2020-08-05 National Institutes of Health/National Institute of General Medical Sciences P41GM103832 United States Welch Foundation Q1242 United States Fako virus empty particles, D2-symmetrized reconstruction Kaelber JT Jiang W Weaver SC Auguste AJ Chiu W Kaelber JT Jiang W Weaver SC Auguste AJ Chiu W Arrangement of the Polymerase Complexes inside a Nine-Segmented dsRNA Virus. Structure UK 28 604 612.e3 2020 32049031 doi:10.1016/j.str.2020.01.011 0969-2126 2005 STRUE6 EMD-7941 other EM volume
The fully asymmetric structure from this dataset using alternate reconstruction techniques
 EMD-7944 other EM volume
The high-resolution icosahedral reconstruction of the virion
 EMD-7945 other EM volume
The icosahedral reconstruction of this dataset
 EMD-7948 associated EM volume EMD-7949 other EM volume EMD-7953 other EM volume EMD-7954 other EM volume Fako virus Fako virus 0 1 2 3 4 5 Fako virus CSW77 Culicinae 43 2 VIRION STRAIN false true clamp protein Fako virus CSW77 LEVO MTLTYWDKEKRMTLKQMIQQVAINEQENELTHYVFTTPLSMPTFGKPMLGYVPLNEVATSKFFSNVNDFD RDNQLAMAHFPDTTITQAYNLTNSIKPGDTSLPDAEVAALKWFWKFFTSINLVRQPPMDNVMYWACQFLS SGTSFLPLERDVEIVFSGFKGSHICMFSNLRQMNLSPILCPYYDLITNFKTTTEIRAYVDAHEELKSLLT YLCLCTIVGLCDTFTETRNMDTGEYVWKVRDVVSRNHTPAQNVEKFCYTIQNAKYMIQLVHVLLFPLTDN KYADLPNYVAVITQGAINQSRSHNVINTTDESNSNTTSDTAASTSGIVSGDTGTVASLYPDEFKYVQS major capsid protein Fako virus CSW77 LEVO MRPIRMYKNNQERTNLKHQEINEEQQNEQTTSNQGFTRSDNSGKINIERISSSRNQITDGKTVSSYSKIE TNRSSQDSVQHGGSSITYTSDTTGNPRITNARTNNDETHATGPIEDLNSTSHGREPEIESFADRAELAMM IQGMTVGALTVQPMRSIRSTFANLANVLIFHDVFTTEDKPSAFIEYHSDEMIVNMPKQTYNPIDNLAKIL YLPSLEKFKYGTGIVQLNYSPHISKLYQNTNNIINTITDGITYANRTEFFIRVMVLMMMDRKILTMEFYD VDTSAISNTAILPTIPTTTGVSPLLRIDTRTEPIWYNDAIKTLITNLTIQYGKIKTVLDANAVKRYSVVG YPIDQYRAYLYNHNLLEYLGKKVKREDIMSLIKALSYEFDLITISDLEYQNIPKWFSDNDLSRFIFSICM FPDIVRQFHALNIDYFSQANVFTVKSENAIVKMLNSNQNMEPTIINWFLFRICAIDKTVIDDYFSLEMTP IIMRPKLYDFDMKRGEPVSLLYILELILFSIMFPNVTQHMLGQIQARILYISMYAFRQEYLKFITKFGFY YKIVNGRKEYIQVTNQNERMTENNDVLTGNLYPSLFTDDPTLSAIAPTLAKIARLMKPTTSLTPDDRAIA AKFPRFKDSAHLNPYSSLNIGGRTQHSVTYTRMYDAIEEMFNLILRAFASSFAQRPRAGVTQLKSLLTQL ADPLCLALDGHVYHLYNVMANMMQNFIPNTDGQFHSFRACSYAVKDGGNIYRVVQNGDELNESLLIDTAI VWGLLGNTDSSYGNAIGATGTANVPTKVQPVIPTPDNFITPTIHLKTSIDAICSVEGILLLILSRQTTIP GYEDELNKLRTGISQPKVTERQYRRARESIKNMLGSGDYNVAPLHFLLHTEHRSTKLSKPLIRRVLDNVV QPYVANLDPAEFENTPQLIENSNMTRLQIALKMLTGDMDDIVKGLILHKRACAKFDVYETLTIPTDVKTI VLTMQHISTQTQNNMVYYVFLIDGVKILAEDIKNVNFQIDITGIWPEYVITLLLRAINNGFNTYVSMPNI LYKPTITADVRQFMNTTKAETLLISNKSIVHEIMFFDNALQPKMSSDTLALSEAVYRTIWNSSIITQRIS ARGLMNLEDARPPEAKISHQSELDMGKIDETSGEPIYTSGLQKMQSSKVSMANVVLSAGSDVIRQAAIKY NVVRTQEIILFE turret protein Fako virus CSW77 LEVO MIDLRLEEDILTATLPEFLSTRPKYRYAYTNTKQQDIRFQGPMRHVRLTHLYKQTKLWNLQYIERELAIS EIDDALDEFIQTFSLPYVIEQGTYKYNMLLGMHAHNVNYQDDVSELIANNPQLLNYLDDNPFSAIFELVN VDLQIYQYGQNIFNNEAEHTILFLKDNTNYGVIQALQKHPFSATHINWHLHKHIFVFHSREQLLNKLLSA GLEDSQLYQRQKTYSTKRGDRPTERMVTYIEDDHIRRIQAVFPLLLDNIFDVKLHKDSSMTWLKSYADMI YDSVKNSNSTITPEIRKLYLRMYNQYMRIFLPIEQYMLYDNTCWPFSEKITLKINVRLISSRENQPVLWK TPIDTENLISIVQPDEPINKLNFTAIPSTMIRLNDNITMYRAVKDMFSAIEYLPDAIENIPTLTMKEQAL SRYISPDSEAQNFFNNQPPYLNSIMNVNRQVFEAVKRGNIQVSTGSMEHLCLCMHVKSGLIVGRTVLIDD KVVLRRNFNASTAKMITCYVKAFAQLYGEGSLINPGLRMVFFGVETEPAIDILKLFYGDKSLYIQGFGDR GIGRDKFRTKIEDALTLRIGCDILISDIDQADYEDPNEEKFDDITDFVCYVTELVISNATVGLVKISMPT YYIMNKISSTLNNKFSNVAINIVKLSTQKPYTYEAYIMLSHGSTLTNKGYLRNPVCDVYLEKISLQPMDL KIISTISNEINYDKPTLYRFVVDKNDVTDVSIAMHILSIHCSTITTRSVMVRSDNTGAFVTMSGIKDMKR VAIMNRMTDGTSANSYMHEQNGKLYLQKVPYLEDLISAFPNGFGSTYQNDYDSSMSVINVNALIRQVVYR VISKSIPVALLESLSRIRIIGGRDLGEMNAVYKLYKTPIEVYDAVGITREYPHVQISYRAQRYSFTESIP NHTLLLANYVIMNDVDGAPISSLEQINTIKKIISKISLGSIAYIQVYTDIVARNINVMTKNDSFLISANA DKTVFKVQVSGYKAVEMCNYEQLLQLVSDNTGVNIIKLTYQDVLESCVLSSGILGDTGSWLLDLVLASTY IIEIRG RNA-dependent RNA polymerase Fako virus CSW77 LEVO MATEPNEINLRMTQTLMKQIEDTTFKIRRKHDDMYTYLIDDTAAIEMYPDTETPFRMKSSLHELYIQVKC QIPKSIIRPPLYNNDMYPLNNNNTNFLEDRPFNYLCNFDWYEFLSRTKDELGMHYNMIRDLIAMSSQTRY SNIWSNISGIIMYLRQYQRGFALRAILARLLKQWNNFPFFDTWDGFRDVLPNTSTAWPLLFYAFMSVTFD YICENISEGEAIVCFQNHLENAQVSYQDTKLEKKNNYTLWLKYECHNLRVALTPRYDYTGTVSGNFLKDT TEYIIENEFENNEIAMRNNLLPSFYAILQQMRQKLKTVEDIIRLLTICYSARDDRTYYGTLMELAISKAI KPQVAGSIVPAPIPTSWLQKDPKMVLSARYPSTSFLSQMQEFYRRYYPALQKEIDVHALSASFINFLSTA SAGVGIELPEEIVNMVQDKRLLYLIKKGSGKRVLQEALLVEKYNDLDPIINDFVRLIKIVVRKQIERRQR GIAGIPNNVLKINQVTYEANKPFSKIARAPSHGKQSGNASDIHDLLFYTTQEDVSHIETNGKRQMRGIVI SSADVKGMDTHIQINAAMNQHLGAIEILDGIQYDVGPFRQTNAIIQDIQGNVYEKSLNGGQQAIAFGLAN FSQTTGINSKYFGQIPNQEGTFPSGLITTSNHHTQMLTLLIETALTTFTKEFGKSMAISHLMILGDDVSL MLHGNDKDINFFMKYLVEKFSQLGLILERDESRNFGVFLQQHVINGRFNGFSNRIAIFTSEDYKTRKSVR ESCTEYNALIDDVIFRTYNVRKLLQFQRIHQFVVLSKYVFRIQNYKYESLRAKLAKRMNVFEYELKIKDN DKTDVHNRNALRFIGIQIPYTYFQYSGGGEIPPESFQKKDGSFTYEYSIYSPRGKWLRKFLYDISHDARD VKFQIDHEMMKLYNLDICDFLLQYNVLDIQEEIRSTIIDRELVSKLAMNLESLEHSNARMISRRASESLR SMGIRLPANGVYGYQINERLVKVLQNIQQSDYEVKMVGDTLFTAIMEKFEHHKVRMEKGDKLHNFTLDFS NKDDKITINRKMLALHNISISKNMMPYSDAWMLYTCLDNTYNTSSDLATALAHSQGHFKSFQYDRDMFAE SVKIASKHGIGSLPMELFFEASNIRDTAQLKWIEAIKYYVQFKDYLYPYSLNPRRLFFIPEQVSSVSNIL NQENIPADINQKALLFRRAYAYVLSHPFCISGAKAIFVEDRIS polymerase accessory protein Fako virus CSW77 LEVO MFAIPFTASQVYSHLGLYQQPIEKLDPLTKVQYESAEKLRDIITQLSRRSGGISLRKNLIRDIAFGNKPK LNIPSLTHQVRHNREFKHGRGQFILVDSNGSDYYDGIFDDMVLILRSNFVLPNVPGIISEQLRLIVIDND FYLKHIPSEIAILRDVLSEHMVKVSIDGVSLDDPYISKFFRKPFILYDHTKFRKVDLTKVVLINKTGKSK AQLIDKYKLTDDAVFISYEVFDIMLQPVKSRDGDIEQFVRMRGDIETWKMKIGTTFESNLMELFIHGVPV MNSTSQLQLDFQISDIRSANVFDEQIVCAAKLNGLREQCLKESSLIRVNIIGQKGSGKSMLMRLINERGI PGISRKIICIDSDAYGKWKTQTQYLDDKFSALKLINVDNLHEISQDDNIISYYEQFIIDQLLAHNITISE HTNSIRFIKQFKVDTLKDIGRKFKELYLADFKEQIHFYEYLCGNIPEPSSTLLITFLHATVETSAAPGTN MNFSLNTILYPLQSILNRKRGALVNFILNRIYDEMGTEAFTRLRPCDVWK singleParticle particle 7.8 10.0 C4H12NO3Cl Tris-HCl 1.0 EDTA 100.0 NaCl sodium chloride PLASMA CLEANING
unspecified
 ETHANE FEI VITROBOT MARK IV
JEOL 3200FSC FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 4.7 JEOL 3200FSC CRYOHOLDER NITROGEN In-column Omega Filter DIRECT ELECTRON DE-20 (5k x 3k) INTEGRATING 2400 30.0 1 9772 jspr EMD-6001 D2 FOURIER SPACE 5.6 FSC 0.143 CUT-OFF jspr 4886 OTHER jspr PROJECTION MATCHING jspr emd_7948.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 576 576 576 -288 -288 -288 576 576 576 867.45605 867.45605 867.45605 90.0 90.0 90.0 X Y Z -5.914177 9.904613 0.055634875 0.818663 1.506 1.506 1.506 2.5 AUTHOR D2-symmetrized map of Fako virus empty particles emd_7948_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 576 576 576 -288 -288 -288 576 576 576 867.45605 867.45605 867.45605 90.0 90.0 90.0 X Y Z -5.7886834 8.43748 0.039187446 0.79537874 1.506 1.506 1.506 AUTHOR D2-symmetrized map of Fako virus empty particles. Half set, unmasked emd_7948_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 576 576 576 -288 -288 -288 576 576 576 867.45605 867.45605 867.45605 90.0 90.0 90.0 X Y Z -6.0585375 8.511493 0.040688988 0.7947973 1.506 1.506 1.506 AUTHOR D2-symmetrized map of Fako virus empty particles. Half set, unmasked