2020-08-05 REL RCSB RCSB RCSB 2018-05-26 2019-01-16 2019-01-16 2020-08-05 National Institutes of Health/National Institute of General Medical Sciences P41GM103832 United States Welch Foundation Q1242 United States Fako virus empty particles aligned to the best decoy map (asymmetric reconstruction) showing the locations of the polymerase complexes Kaelber JT Jiang W Weaver SC Auguste AJ Chiu W Kaelber JT Jiang W Weaver SC Auguste AJ Chiu W Arrangement of the Polymerase Complexes inside a Nine-Segmented dsRNA Virus. Structure UK 28 604 612.e3 2020 32049031 doi:10.1016/j.str.2020.01.011 0969-2126 2005 STRUE6 EMD-7941 associated EM volume EMD-7944 other EM volume EMD-7945 other EM volume EMD-7948 other EM volume EMD-7949 other EM volume EMD-7953 other EM volume EMD-7954 other EM volume Fako virus Fako virus 0 1 2 3 4 5 Fako virus CSW77 Culicinae 43 2 VIRION STRAIN false true major capsid protein Fako virus CSW77 LEVO MRPIRMYKNNQERTNLKHQEINEEQQNEQTTSNQGFTRSDNSGKINIERISSSRNQITDG KTVSSYSKIETNRSSQDSVQHGGSSITYTSDTTGNPRITNARTNNDETHATGPIEDLNST SHGREPEIESFADRAELAMMIQGMTVGALTVQPMRSIRSTFANLANVLIFHDVFTTEDKP SAFIEYHSDEMIVNMPKQTYNPIDNLAKILYLPSLEKFKYGTGIVQLNYSPHISKLYQNT NNIINTITDGITYANRTEFFIRVMVLMMMDRKILTMEFYDVDTSAISNTAILPTIPTTTG VSPLLRIDTRTEPIWYNDAIKTLITNLTIQYGKIKTVLDANAVKRYSVVGYPIDQYRAYL YNHNLLEYLGKKVKREDIMSLIKALSYEFDLITISDLEYQNIPKWFSDNDLSRFIFSICM FPDIVRQFHALNIDYFSQANVFTVKSENAIVKMLNSNQNMEPTIINWFLFRICAIDKTVI DDYFSLEMTPIIMRPKLYDFDMKRGEPVSLLYILELILFSIMFPNVTQHMLGQIQARILY ISMYAFRQEYLKFITKFGFYYKIVNGRKEYIQVTNQNERMTENNDVLTGNLYPSLFTDDP TLSAIAPTLAKIARLMKPTTSLTPDDRAIAAKFPRFKDSAHLNPYSSLNIGGRTQHSVTY TRMYDAIEEMFNLILRAFASSFAQRPRAGVTQLKSLLTQLADPLCLALDGHVYHLYNVMA NMMQNFIPNTDGQFHSFRACSYAVKDGGNIYRVVQNGDELNESLLIDTAIVWGLLGNTDS SYGNAIGATGTANVPTKVQPVIPTPDNFITPTIHLKTSIDAICSVEGILLLILSRQTTIP GYEDELNKLRTGISQPKVTERQYRRARESIKNMLGSGDYNVAPLHFLLHTEHRSTKLSKP LIRRVLDNVVQPYVANLDPAEFENTPQLIENSNMTRLQIALKMLTGDMDDIVKGLILHKR ACAKFDVYETLTIPTDVKTIVLTMQHISTQTQNNMVYYVFLIDGVKILAEDIKNVNFQID ITGIWPEYVITLLLRAINNGFNTYVSMPNILYKPTITADVRQFMNTTKAETLLISNKSIV HEIMFFDNALQPKMSSDTLALSEAVYRTIWNSSIITQRISARGLMNLEDARPPEAKISHQ SELDMGKIDETSGEPIYTSGLQKMQSSKVSMANVVLSAGSDVIRQAAIKYNVVRTQEIIL FE RNA-dependent RNA polymerase Fako virus CSW77 LEVO MATEPNEINLRMTQTLMKQIEDTTFKIRRKHDDMYTYLIDDTAAIEMYPDTETPFRMKSS LHELYIQVKCQIPKSIIRPPLYNNDMYPLNNNNTNFLEDRPFNYLCNFDWYEFLSRTKDE LGMHYNMIRDLIAMSSQTRYSNIWSNISGIIMYLRQYQRGFALRAILARLLKQWNNFPFF DTWDGFRDVLPNTSTAWPLLFYAFMSVTFDYICENISEGEAIVCFQNHLENAQVSYQDTK LEKKNNYTLWLKYECHNLRVALTPRYDYTGTVSGNFLKDTTEYIIENEFENNEIAMRNNL LPSFYAILQQMRQKLKTVEDIIRLLTICYSARDDRTYYGTLMELAISKAIKPQVAGSIVP APIPTSWLQKDPKMVLSARYPSTSFLSQMQEFYRRYYPALQKEIDVHALSASFINFLSTA SAGVGIELPEEIVNMVQDKRLLYLIKKGSGKRVLQEALLVEKYNDLDPIINDFVRLIKIV VRKQIERRQRGIAGIPNNVLKINQVTYEANKPFSKIARAPSHGKQSGNASDIHDLLFYTT QEDVSHIETNGKRQMRGIVISSADVKGMDTHIQINAAMNQHLGAIEILDGIQYDVGPFRQ TNAIIQDIQGNVYEKSLNGGQQAIAFGLANFSQTTGINSKYFGQIPNQEGTFPSGLITTS NHHTQMLTLLIETALTTFTKEFGKSMAISHLMILGDDVSLMLHGNDKDINFFMKYLVEKF SQLGLILERDESRNFGVFLQQHVINGRFNGFSNRIAIFTSEDYKTRKSVRESCTEYNALI DDVIFRTYNVRKLLQFQRIHQFVVLSKYVFRIQNYKYESLRAKLAKRMNVFEYELKIKDN DKTDVHNRNALRFIGIQIPYTYFQYSGGGEIPPESFQKKDGSFTYEYSIYSPRGKWLRKF LYDISHDARDVKFQIDHEMMKLYNLDICDFLLQYNVLDIQEEIRSTIIDRELVSKLAMNL ESLEHSNARMISRRASESLRSMGIRLPANGVYGYQINERLVKVLQNIQQSDYEVKMVGDT LFTAIMEKFEHHKVRMEKGDKLHNFTLDFSNKDDKITINRKMLALHNISISKNMMPYSDA WMLYTCLDNTYNTSSDLATALAHSQGHFKSFQYDRDMFAESVKIASKHGIGSLPMELFFE ASNIRDTAQLKWIEAIKYYVQFKDYLYPYSLNPRRLFFIPEQVSSVSNILNQENIPADIN QKALLFRRAYAYVLSHPFCISGAKAIFVEDRIS turret Fako virus CSW77 LEVO MIDLRLEEDILTATLPEFLSTRPKYRYAYTNTKQQDIRFQGPMRHVRLTHLYKQTKLWNL QYIERELAISEIDDALDEFIQTFSLPYVIEQGTYKYNMLLGMHAHNVNYQDDVSELIANN PQLLNYLDDNPFSAIFELVNVDLQIYQYGQNIFNNEAEHTILFLKDNTNYGVIQALQKHP FSATHINWHLHKHIFVFHSREQLLNKLLSAGLEDSQLYQRQKTYSTKRGDRPTERMVTYI EDDHIRRIQAVFPLLLDNIFDVKLHKDSSMTWLKSYADMIYDSVKNSNSTITPEIRKLYL RMYNQYMRIFLPIEQYMLYDNTCWPFSEKITLKINVRLISSRENQPVLWKTPIDTENLIS IVQPDEPINKLNFTAIPSTMIRLNDNITMYRAVKDMFSAIEYLPDAIENIPTLTMKEQAL SRYISPDSEAQNFFNNQPPYLNSIMNVNRQVFEAVKRGNIQVSTGSMEHLCLCMHVKSGL IVGRTVLIDDKVVLRRNFNASTAKMITCYVKAFAQLYGEGSLINPGLRMVFFGVETEPAI DILKLFYGDKSLYIQGFGDRGIGRDKFRTKIEDALTLRIGCDILISDIDQADYEDPNEEK FDDITDFVCYVTELVISNATVGLVKISMPTYYIMNKISSTLNNKFSNVAINIVKLSTQKP YTYEAYIMLSHGSTLTNKGYLRNPVCDVYLEKISLQPMDLKIISTISNEINYDKPTLYRF VVDKNDVTDVSIAMHILSIHCSTITTRSVMVRSDNTGAFVTMSGIKDMKRVAIMNRMTDG TSANSYMHEQNGKLYLQKVPYLEDLISAFPNGFGSTYQNDYDSSMSVINVNALIRQVVYR VISKSIPVALLESLSRIRIIGGRDLGEMNAVYKLYKTPIEVYDAVGITREYPHVQISYRA QRYSFTESIPNHTLLLANYVIMNDVDGAPISSLEQINTIKKIISKISLGSIAYIQVYTDI VARNINVMTKNDSFLISANADKTVFKVQVSGYKAVEMCNYEQLLQLVSDNTGVNIIKLTY QDVLESCVLSSGILGDTGSWLLDLVLASTYIIEIRG clamp Fako virus CSW77 LEVO MTLTYWDKEKRMTLKQMIQQVAINEQENELTHYVFTTPLSMPTFGKPMLGYVPLNEVATS KFFSNVNDFDRDNQLAMAHFPDTTITQAYNLTNSIKPGDTSLPDAEVAALKWFWKFFTSI NLVRQPPMDNVMYWACQFLSSGTSFLPLERDVEIVFSGFKGSHICMFSNLRQMNLSPILC PYYDLITNFKTTTEIRAYVDAHEELKSLLTYLCLCTIVGLCDTFTETRNMDTGEYVWKVR DVVSRNHTPAQNVEKFCYTIQNAKYMIQLVHVLLFPLTDNKYADLPNYVAVITQGAINQS RSHNVINTTDESNSNTTSDTAASTSGIVSGDTGTVASLYPDEFKYVQS accessory NTPase Fako virus CSW77 LEVO MFAIPFTASQVYSHLGLYQQPIEKLDPLTKVQYESAEKLRDIITQLSRRSGGISLRKNLI RDIAFGNKPKLNIPSLTHQVRHNREFKHGRGQFILVDSNGSDYYDGIFDDMVLILRSNFV LPNVPGIISEQLRLIVIDNDFYLKHIPSEIAILRDVLSEHMVKVSIDGVSLDDPYISKFF RKPFILYDHTKFRKVDLTKVVLINKTGKSKAQLIDKYKLTDDAVFISYEVFDIMLQPVKS RDGDIEQFVRMRGDIETWKMKIGTTFESNLMELFIHGVPVMNSTSQLQLDFQISDIRSAN VFDEQIVCAAKLNGLREQCLKESSLIRVNIIGQKGSGKSMLMRLINERGIPGISRKIICI DSDAYGKWKTQTQYLDDKFSALKLINVDNLHEISQDDNIISYYEQFIIDQLLAHNITISE HTNSIRFIKQFKVDTLKDIGRKFKELYLADFKEQIHFYEYLCGNIPEPSSTLLITFLHAT VETSAAPGTNMNFSLNTILYPLQSILNRKRGALVNFILNRIYDEMGTEAFTRLRPCDVWK singleParticle particle 7.8 10.0 C4H12NO3CL Tris-HCl 1.0 EDTA 100.0 NaCl sodium chloride PLASMA CLEANING
unspecified
 ETHANE FEI VITROBOT MARK IV
JEOL 3200FSC FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 4.7 JEOL 3200FSC CRYOHOLDER NITROGEN In-column Omega Filter DIRECT ELECTRON DE-20 (5k x 3k) INTEGRATING 2400 30.0 1 9772 jspr EMD-6001 C1 FOURIER SPACE OTHER jspr
The reconstruction method used does not preserve the independence of half-sets. As such, the Fourier shell correlation between half-sets is a biased measure and resolution is not calculated.
4886 OTHER jspr PROJECTION MATCHING jspr emd_7941.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 405 405 405 -202 -202 -202 405 405 405 867.51 867.51 867.51 90.0 90.0 90.0 X Y Z -66.40891 99.88296 0.61569375 7.19561 2.142 2.142 2.142 30 AUTHOR Asymmetric reconstruction of Fako virus empty particles aligned to the best decoy map, showing the locations of the polymerase complexes