2023-11-15 REL RCSB RCSB RCSB 2018-04-26 2018-08-08 2018-09-19 2023-11-15 Cryo-EM structure of FLNaABD E254K bound to phalloidin-stabilized F-actin Iwamoto DV Huehn AR Actin-binding domain, Actin crosslinker, STRUCTURAL PROTEIN Iwamoto DV Huehn A Simon B Huet-Calderwood C Baldassarre M Sindelar CV Calderwood DA Structural basis of the filamin A actin-binding domain interaction with F-actin. Nat. Struct. Mol. Biol. US 25 918 927 2018 30224736 doi:10.1038/s41594-018-0128-3 1545-9985 EMD-7832 other EM volume
FLNaABD-Q170P bound to phalloidin-stabilized F-actin
 EMD-7833 other EM volume
FLNaABD-WT bound to phalloidin-stabilized F-actin
 6d8c FULLOVERLAP Helical complex of FLNaABD E254K bound to phalloidin-stabilized F-actin Helical complex of FLNaABD E254K bound to phalloidin-stabilized F-actin 0 1 2 3 Homo sapiens Filamin-A Homo sapiens 0.03447625 5 Escherichia coli LEVO MHHHHHHGSLVPRSENLYFQGSDILQGTMSSSHSRAGQSAAGAAPGGGVDTRDAEMPATEKDLAEDAPWKKIQQNTFTRW CNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDG NLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPD WDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDKHSVMTYLSQFPKAKLKPGAPLRPK P21333 Actin, alpha skeletal muscle Gallus gallus Breast 0.04186261299999999 5 LEVO DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF P68139 Phalloidin Amanita phalloides 0.000808899 3 LEVO (HYP)AW(G5G)A(ALO)C ADENOSINE-5'-DIPHOSPHATE 0.000427201 5 ADP MAGNESIUM ION 2.4305e-05 5 MG helical filament 8.0 ETHANE HOMEMADE PLUNGER FEI TITAN KRIOS SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 1.0 2.9 105000.0 37500.0 FEI TITAN KRIOS AUTOGRID HOLDER GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 1-40 2 2140 12.0 50.0
Micrographs from only one of the grids were used in the reconstruction. From that grid, only micrographs where Gctf detected signal at resolutions better than 4A were used in the reconstruction (~15%).
 1 27.54 -166.73 C1 3.54 FSC 0.143 CUT-OFF RELION 2.0.3 67000 67000 EMAN2 NOT APPLICABLE emd_7831.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 210 210 210 0 0 0 210 210 210 279.30002 279.30002 279.30002 90.0 90.0 90.0 X Y Z -0.17799109 0.40055856 0.0012726671 0.014981323 1.33 1.33 1.33 0.07 AUTHOR Symmetrized map of FLNaABD-E254K bound to phalloidin-stabilized F-actin. This map has been low-pass filtered to 3.6 A and sharpened with a B-factor of -150. 6C1D B 1-375 PDB experimental model 3HOC A 39-153 PDB experimental model RIGID BODY FIT emd_7831_msk_1.map emd_7831_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 210 210 210 0 0 0 210 210 210 279.30002 279.30002 279.30002 90.0 90.0 90.0 X Y Z -0.03670282 0.09851265 0.0012690367 0.0075722607 1.33 1.33 1.33 AUTHOR Symmetrized map of FLNaABD-E254K bound to phalloidin-stabilized F-actin. Low-pass filtered to 10 A and sharpened with a B-factor of -150. Masked to display the FLNaABD CH2 domain cryo-EM density. emd_7831_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 210 210 210 0 0 0 210 210 210 279.30002 279.30002 279.30002 90.0 90.0 90.0 X Y Z -0.01995303 0.06290442 0.00060930767 0.004094585 1.33 1.33 1.33 AUTHOR Independently refined half map(2) of FLNaABD-E254K bound to phalloidin-stabilized F-actin. This half map was symmetrized using parameters calculated from the full map. emd_7831_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 210 210 210 0 0 0 210 210 210 279.30002 279.30002 279.30002 90.0 90.0 90.0 X Y Z -0.015294986 0.06522607 0.0006007414 0.0040861247 1.33 1.33 1.33 AUTHOR Independently refined half map(1) of FLNaABD-E254K bound to phalloidin-stabilized F-actin. This half map was symmetrized using parameters calculated from the full map.