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            <date>2026-07-15</date>
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        <sites>
            <deposition>RCSB</deposition>
            <last_processing>RCSB</last_processing>
        </sites>
        <key_dates>
            <deposition>2026-05-12</deposition>
            <header_release>2026-07-15</header_release>
            <map_release>2026-07-15</map_release>
            <update>2026-07-15</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>Other private</funding_body>
                <country>Brazil</country>
            </grant_reference>
        </grant_support>
        <title>Cryo-EM map of the immature SLEV, full particle</title>
        <authors_list>
            <author>Guimaraes SL</author>
            <author>Marques RE</author>
            <author>Coimbra LD</author>
            <author>Benedetti C</author>
        </authors_list>
        <keywords>SLEV, cryo-EM, asymmetric unit, VIRUS</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="false">
                    <author ORCID="0000-0002-3699-3927" order="1">Guimaraes SL</author>
                    <author ORCID="0000-0002-6949-0947" order="2">Marques RE</author>
                    <author ORCID="0000-0003-0120-6898" order="3">Coimbra LD</author>
                    <author ORCID="0000-0002-4602-0256" order="4">Benedetti C</author>
                    <title>THE STRUCTURES OF MATURE AND IMMATURE ST. LOUIS ENCEPHALITIS VIRUS REVEALS KEY HISTIDINE RESIDUES FOR VIRUS FITNESS</title>
                    <journal_abbreviation>To Be Published</journal_abbreviation>
                    <external_references type="CSD">0353</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
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            <emdb_reference>
                <emdb_id>EMD-77099</emdb_id>
                <relationship>
                    <other>other EM volume</other>
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                <details>SLEV mature ASU map</details>
            </emdb_reference>
            <emdb_reference>
                <emdb_id>EMD-77122</emdb_id>
                <relationship>
                    <other>other EM volume</other>
                </relationship>
                <details>SLEV mature Full map</details>
            </emdb_reference>
        </emdb_list>
        <other_db_list>
            <db_reference>
                <db_name>PDB</db_name>
                <accession_id>13JV</accession_id>
                <content_type>unspecified</content_type>
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            </db_reference>
            <db_reference>
                <db_name>EMDB</db_name>
                <accession_id>EMD-77099</accession_id>
                <content_type>other EM volume</content_type>
                <details>SLEV mature ASU map</details>
            </db_reference>
            <db_reference>
                <db_name>EMDB</db_name>
                <accession_id>EMD-77122</accession_id>
                <content_type>other EM volume</content_type>
                <details>SLEV mature Full map</details>
            </db_reference>
            <db_reference>
                <db_name>EMDB</db_name>
                <accession_id>EMD-77127</accession_id>
                <content_type>associated EM volume</content_type>
            </db_reference>
        </other_db_list>
    </crossreferences>
    <sample>
        <name>St. Louis encephalitis virus</name>
        <supramolecule_list>
            <virus_supramolecule supramolecule_id="1">
                <name>St. Louis encephalitis virus</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>2</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <sci_species_name ncbi="11080">St. Louis encephalitis virus</sci_species_name>
                <sci_species_strain>BeH355964</sci_species_strain>
                <natural_host database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_host>
                <virus_type>VIRION</virus_type>
                <virus_isolate>STRAIN</virus_isolate>
                <virus_enveloped>true</virus_enveloped>
                <virus_empty>false</virus_empty>
            </virus_supramolecule>
        </supramolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
            <specimen_preparation_list>
                <single_particle_preparation preparation_id="1">
                    <buffer>
                        <ph>7.4</ph>
                    </buffer>
                    <sugar_embedding>
                        <material>Water</material>
                    </sugar_embedding>
                    <grid>
                        <model>Quantifoil R2/1</model>
                        <material>COPPER</material>
                        <mesh>200</mesh>
                        <support_film film_type_id="1">
                            <film_material>CARBON</film_material>
                            <film_topology>HOLEY ARRAY</film_topology>
                        </support_film>
                        <pretreatment>
                            <type>GLOW DISCHARGE</type>
                        </pretreatment>
                    </grid>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                    </vitrification>
                </single_particle_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <single_particle_microscopy microscopy_id="1">
                    <microscope>TFS KRIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <nominal_defocus_min units="µm">1.5</nominal_defocus_min>
                    <nominal_defocus_max units="µm">2.5</nominal_defocus_max>
                    <specimen_holder_model>FEI TITAN KRIOS AUTOGRID HOLDER</specimen_holder_model>
                    <cooling_holder_cryogen>NITROGEN</cooling_holder_cryogen>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>FEI FALCON III (4k x 4k)</film_or_detector_model>
                            <detector_mode>COUNTING</detector_mode>
                            <average_electron_dose_per_image units="e/Å^2">30.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </single_particle_microscopy>
            </microscopy_list>
            <singleparticle_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
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                    <number_selected>631158</number_selected>
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                <ctf_correction>
                    <software_list>
                        <software>
                            <name>CTFFIND</name>
                        </software>
                    </software_list>
                    <type>PHASE FLIPPING ONLY</type>
                </ctf_correction>
                <startup_model type_of_model="NONE"/>
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                    <applied_symmetry>
                        <point_group>I</point_group>
                    </applied_symmetry>
                    <algorithm>FOURIER SPACE</algorithm>
                    <resolution units="Å" res_type="BY AUTHOR">7.1</resolution>
                    <resolution_method>FSC 0.143 CUT-OFF</resolution_method>
                    <software_list>
                        <software>
                            <name>RELION</name>
                            <version>4</version>
                        </software>
                    </software_list>
                    <details>somehow the FSC graphic in the validation analysis did not show the reported resolution described here (7.1 A). Also in next page, in Resolution estimates, the table does not include the Reported by author 7.1 A resolution</details>
                    <number_images_used>50745</number_images_used>
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                            <name>RELION</name>
                            <version>4</version>
                        </software>
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        <label>::::EMDATABANK.org::::EMD-77127::::</label>
        <annotation_details>post-processed map obtained with the original map from 3D-auto-refine and mask</annotation_details>
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                <label>::::EMDATABANK.org::::EMD-77127::::</label>
                <annotation_details>original map obtained in 3D-auto-refine with imposed icosahedral symmetry, before post-processing</annotation_details>
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                <label>::::EMDATABANK.org::::EMD-77127::::</label>
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                    <space_group>1</space_group>
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                <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
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                    <col>700</col>
                    <row>700</row>
                    <sec>700</sec>
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                <annotation_details>half map 2</annotation_details>
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