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    <admin>
        <current_status>
            <date>2026-08-26</date>
            <code>REL</code>
            <processing_site>RCSB</processing_site>
        </current_status>
        <revision_history>
            <revision version="1.0" date="2026-08-26">
                <change_list>
                    <model>
                        <revision_type>INITIAL_RELEASE</revision_type>
                        <provider>REPOSITORY</provider>
                    </model>
                    <metadata>
                        <revision_type>INITIAL_RELEASE</revision_type>
                        <provider>REPOSITORY</provider>
                    </metadata>
                </change_list>
            </revision>
        </revision_history>
        <sites>
            <deposition>RCSB</deposition>
            <last_processing>RCSB</last_processing>
        </sites>
        <key_dates>
            <deposition>2026-03-25</deposition>
            <header_release>2026-08-26</header_release>
            <map_release>2026-08-26</map_release>
            <update>2026-08-26</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>Other private</funding_body>
                <country>China</country>
            </grant_reference>
        </grant_support>
        <title>Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630</title>
        <authors_list>
            <author>Huang J</author>
            <author>Chu HF</author>
            <author>Tong L</author>
        </authors_list>
        <keywords>Protein Degrader, HYDROLASE</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author order="1">Nishida Y</author>
                    <author ORCID="0000-0002-2166-4303" order="2">Impedovo V</author>
                    <author ORCID="0000-0003-1321-0114" order="3">Ayoub E</author>
                    <author ORCID="0000-0003-0618-4798" order="4">Baran N</author>
                    <author order="5">Scruggs DA</author>
                    <author order="6">Mizuno H</author>
                    <author order="7">Khazaei S</author>
                    <author ORCID="0000-0002-3330-2174" order="8">Ostermann LB</author>
                    <author ORCID="0000-0002-7346-4864" order="9">Kamachi K</author>
                    <author order="10">Zhang L</author>
                    <author order="11">Ishizawa J</author>
                    <author ORCID="0000-0001-8780-5124" order="12">Singh S</author>
                    <author ORCID="0009-0001-4937-4527" order="13">Bedoy AD</author>
                    <author order="14">Mak PY</author>
                    <author order="15">Carter BZ</author>
                    <author ORCID="0000-0002-3233-1045" order="16">Sugihara E</author>
                    <author ORCID="0009-0009-3008-8078" order="17">Takimoto T</author>
                    <author order="18">Tong Y</author>
                    <author order="19">Yan H</author>
                    <author order="20">Chen D</author>
                    <author ORCID="0000-0001-6547-9727" order="21">Huang J</author>
                    <author ORCID="0000-0001-6093-943X" order="22">Chu HF</author>
                    <author ORCID="0000-0002-0563-6468" order="23">Tong L</author>
                    <author ORCID="0000-0003-3400-6577" order="24">Ahmed Z</author>
                    <author order="25">Namjoshi S</author>
                    <author ORCID="0000-0003-1659-2429" order="26">Tainer J</author>
                    <author order="27">Gagea M</author>
                    <author order="28">Huynh T</author>
                    <author ORCID="0000-0001-9043-538X" order="29">Maiti A</author>
                    <author ORCID="0000-0002-9140-0610" order="30">Sasaki K</author>
                    <author order="31">Cuglievan B</author>
                    <author ORCID="0000-0001-9937-0957" order="32">Boettcher S</author>
                    <author order="33">Haferlach T</author>
                    <author ORCID="0000-0002-7230-0307" order="34">Tiziani S</author>
                    <author order="35">Ma L</author>
                    <author ORCID="0000-0002-1144-1958" order="36">Andreeff M</author>
                    <title>Dual MYC and GSPT1 Protein Degrader for MYC-Driven Hematologic Malignancies.</title>
                    <journal_abbreviation>Blood</journal_abbreviation>
                    <country>US</country>
                    <year>2026</year>
                    <external_references type="PUBMED">42607078</external_references>
                    <external_references type="DOI">doi:10.1182/blood.2025030170</external_references>
                    <external_references type="ISSN">1528-0020</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <pdb_list>
            <pdb_reference>
                <pdb_id>12bp</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
                </relationship>
            </pdb_reference>
        </pdb_list>
        <other_db_list>
            <db_reference>
                <db_name>EMDB</db_name>
                <accession_id>EMD-76291</accession_id>
                <content_type>associated EM volume</content_type>
                <details>Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630</details>
            </db_reference>
        </other_db_list>
    </crossreferences>
    <sample>
        <name>Ternary complex of DDB1-CRBN with GSPT1</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>Ternary complex of DDB1-CRBN with GSPT1</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>3</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>2</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
            </complex_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>Eukaryotic peptide chain release factor GTP-binding subunit ERF3A</name>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.024154234</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="562">Escherichia coli</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MGSSHHHHHHSSGLVPRGSHMGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAP
GENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGE
KSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVP</string>
                    <external_references type="UNIPROTKB">P15170</external_references>
                </sequence>
                <ec_number>3.6.5.-</ec_number>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="2">
                <name>Protein cereblon</name>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.046653616999999994</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="7111">Trichoplusia ni</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>SNMEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQK
DRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSA
VQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSN
PIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYV
HETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPD
KVILCL</string>
                    <external_references type="UNIPROTKB">Q96SW2</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="3">
                <name>DNA damage-binding protein 1</name>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.09334707799999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="7111">Trichoplusia ni</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFIL
TAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE
ELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG
VVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGGNGNS
GEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGE
EVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEK
EVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEE
IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT
QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPK
MQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH</string>
                    <external_references type="UNIPROTKB">Q16531</external_references>
                    <external_references type="UNIPROTKB">Q16531</external_references>
                </sequence>
            </protein_or_peptide>
            <ligand macromolecule_id="4">
                <name>2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-N-[(4-{[2-(9H-pyrido[2,3-b]indol-9-yl)acetamido]methyl}phenyl)methyl]-2,3-dihydro-1H-isoindole-5-carboxamide</name>
                <molecular_weight>
                    <theoretical units="MDa">0.0006146499999999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>A1DBR</formula>
            </ligand>
            <ligand macromolecule_id="5">
                <name>ZINC ION</name>
                <molecular_weight>
                    <theoretical units="MDa">6.5409e-05</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>ZN</formula>
            </ligand>
        </macromolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
            <specimen_preparation_list>
                <single_particle_preparation preparation_id="1">
                    <buffer>
                        <ph>8.0</ph>
                    </buffer>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                    </vitrification>
                </single_particle_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <single_particle_microscopy microscopy_id="1">
                    <microscope>TFS KRIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <nominal_defocus_min units="µm">1.5</nominal_defocus_min>
                    <nominal_defocus_max units="µm">2.0</nominal_defocus_max>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>GATAN K3 (6k x 4k)</film_or_detector_model>
                            <average_electron_dose_per_image units="e/Å^2">58.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </single_particle_microscopy>
            </microscopy_list>
            <singleparticle_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <ctf_correction>
                    <type>PHASE FLIPPING AND AMPLITUDE CORRECTION</type>
                </ctf_correction>
                <startup_model type_of_model="PDB ENTRY">
                    <pdb_model>
                        <pdb_id>6XK9</pdb_id>
                    </pdb_model>
                </startup_model>
                <final_reconstruction>
                    <resolution units="Å" res_type="BY AUTHOR">2.9</resolution>
                    <resolution_method>FSC 0.143 CUT-OFF</resolution_method>
                    <software_list>
                        <software>
                            <name>cryoSPARC</name>
                        </software>
                    </software_list>
                    <number_images_used>291647</number_images_used>
                </final_reconstruction>
                <initial_angle_assignment>
                    <type>MAXIMUM LIKELIHOOD</type>
                </initial_angle_assignment>
                <final_angle_assignment>
                    <type>MAXIMUM LIKELIHOOD</type>
                </final_angle_assignment>
            </singleparticle_processing>
        </structure_determination>
    </structure_determination_list>
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        <label>::::EMDATABANK.org::::EMD-76291::::</label>
        <annotation_details>structure of human DDB1-CRBN-GSPT1 in complex with GT19630</annotation_details>
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                <annotation_details>Half Map A</annotation_details>
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