2024-03-13 REL RCSB RCSB RCSB 2018-03-23 2018-04-18 2018-09-12 2024-03-13 XSEDE MCB140140 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) 1R01GM071940 United States National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) 1R01AI094386 United States Alpha Synuclein fibril formed by full length protein - Rod Polymorph Li B Hatami A Parkinson's disease, Synucleinopathy, Amyloid aggregation, Fibril polymorphism, PROTEIN FIBRIL Li B Ge P Murray KA Sheth P Zhang M Nair G Sawaya MR Shin WS Boyer DR Ye S Eisenberg DS Zhou ZH Jiang L Cryo-EM of full-length alpha-synuclein reveals fibril polymorphs with a common structural kernel. Nat Commun UK 9 3609 3609 2018 30190461 doi:10.1038/s41467-018-05971-2 2041-1723 6cu7 FULLOVERLAP Alpha-synuclein fibril - rod polymorph Alpha-synuclein fibril - rod polymorph 0 1 Homo sapiens Alpha-synuclein Homo sapiens 0.014476108 10 Escherichia coli LEVO MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQK TVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA P37840 helical filament 3.0 15.0 C16H36BrP tetrabutylphosphonium bromide Quantifoil R1.2/1.3 COPPER 200 CARBON HOLEY ARRAY GLOW DISCHARGE AIR
Quantifoil grid was treated with 1,2-Dichloroethane for one week, coated with additional carbon, and baken under 120kV in Camera chamber for 3 days
 ETHANE 100 295 FEI VITROBOT MARK IV
blot force: 1 blot time: 4s.
FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 2.7 1.5 2.7 4.0 130000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN 77.0 77.0 GIF Quantum LS -10 10 GATAN K2 SUMMIT (4k x 4k) COUNTING 3838 3710 3-20 1 1821 10.0 30.0
Frame rate 5 Hz
 1 2.4 179.53 C1 BACK PROJECTION 3.5 FSC 0.5 CUT-OFF RELION 2.0 23830 182253
A elongated Gaussian blob was used for initial model.
 NOT APPLICABLE RELION 2.0 emd_7618.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 192 192 192 -96 -96 -96 192 192 192 205.44 205.44 205.44 90.0 90.0 90.0 X Y Z -0.010801851 0.021767166 0.0011070367 0.0026206695 1.07 1.07 1.07 0.0085 AUTHOR em-volume_P1.map AB INITIO MODEL REAL emd_7618_msk_1.map