Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc.

2024-10-16 REL RCSB RCSB RCSB 2018-03-13 2018-04-11 2018-04-11 2024-10-16 Department of Health & Human Services (HHS) R01GM66223 United States Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc. Srivastava AP Luo M ATP synthase, BIOSYNTHETIC PROTEIN Srivastava AP Luo M Zhou W Symersky J Bai D Chambers MG Faraldo-Gomez JD Liao M Mueller DM High-resolution cryo-EM analysis of the yeast ATP synthase in a lipid membrane. Science US 360 2018 29650704 doi:10.1126/science.aas9699 1095-9203 0038 SCIEAS 6cp6 FULLOVERLAP Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc. Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 Saccharomyces cerevisiae strain ATCC 204508 / S288c ATP synthase subunit 9, mitochondrial Saccharomyces cerevisiae ATCC 204508 / S288c 0.0077903849999999995 10 LEVO (FME)QLVLAAKYIGAGISTIGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLFGV P61829 ATP synthase subunit 5, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.020901139 1 LEVO ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAIVETHKN LDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVK PEIKGGLIVELGDKTVDLSISTKIQKLNKVLEDSI P09457 ATP synthase subunit alpha, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.055007402 3 LEVO ASTKAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGS DRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVP IGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASE AAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGS GSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYR EVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNE LLTEIREKGELSKELLASLKSATESFVATF P07251 ATP synthase subunit beta, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.051181082 3 LEVO ASAAQSTPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTG GPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAG VGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIA EYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDP APATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQD KLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAAEAN P00830 7.1.2.2 ATP synthase subunit gamma, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.03065716 1 LEVO ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSD KGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYP KISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNA SKNAGDMINRYSILYNRTRQAVITNELVDIITGASSLG P38077 ATP synthase subunit delta, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.014565385 1 LEVO AEAAAASSGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPD SQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSVLK Q12165 ATP synthase subunit epsilon, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.006618359 1 LEVO SAWRKAGISYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQYKNGTAASEPTPITK P21306 ATP synthase subunit 4, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.023194497999999997 1 LEVO MSSTPEKQTDPKAKANSIINAIPGNNILTKTGVLGTSAAAVIYAISNELYVINDESILLLTFLGFTGLVAKYLAPAYKDF ADARMKKVSDVLNASRNKHVEAVKDRIDSVSQLQNVAETTKVLFDVSKETVELESEAFELKQKVELAHEAKAVLDSWVRY EASLRQLEQRQLAKSVISRVQSELGNPKFQEKVLQQSISEIEQLLSKLK P05626 ATP synthase subunit d, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.019709424 1 LEVO SLAKSAANKLDWAKVISSLRITGSTATQLSSFKKRNDEARRQLLELQSQPTEVDFSHYRSVLKNTSVIDKIESYVKQYKP VKIDASKQLQVIESFEKHAMTNAKETESLVSKELKDLQSTLDNIQSARPFDELTVDDLTKIKPEIDAKVEEMVKKGKWDV PGYKDRFGNLNVM P30902 ATP synthase subunit H, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.010417298 1 LEVO NVIQDLYLRELKDTKLAPSTLQDAEGNVKPWNPPQKPNLPELELQGPEALKAYTEQNVETAHVAKESEEGESEPIEEDWL VLDDAEETKESH Q12349 ATP synthase subunit f, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.010584165999999999 1 LEVO VSTLIPPKVVSSKNIGSAPNAKRIANVVHFYKSLPQGPAPAIKANTRLARYKAKYFDGDNASGKPLWHFALGIIAFGYSM EYYFHLRHHKGAEEH Q06405 ATP synthase protein 8 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.005825215 1 LEVO MPQLVPFYFMNQLTYGFLLMITLLILFSQFFLPMILRLYVSRLFISKL P00856 ATP synthase subunit a Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.02790043 1 LEVO SPLDQFEIRTLFGLQSSFIDLSCLNLTTFSLYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGK NWGLYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVI IETLSYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMLINLFTLVFGFVPLAMILAIMMLEFAIGIIQGYVWAILTAS YLKDAVYLH P00854 ATP synthase subunit J, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.004145884 1 LEVO MLKRFPTPILKVYWPFFVAGAAVYYGMSKAADLSSNT P81450 ADENOSINE-5'-TRIPHOSPHATE 0.000507181 3 ATP ADENOSINE-5'-DIPHOSPHATE 0.000427201 2 ADP singleParticle particle 1. 8.0

20 mM Tris-HCl, 150 mM NaCl, pH 8.0

Quantifoil R1.2/1.3 COPPER GLOW DISCHARGE 30 ETHANE 91 FEI POLARA 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.0 1.0 2.6 31000.0 GATAN LIQUID NITROGEN NITROGEN 80.0 105.0 GATAN K2 SUMMIT (4k x 4k) COUNTING 5935 8.0 1 541568 C1 3.6 FSC 0.143 CUT-OFF RELION 1.4 160937 PROJECTION MATCHING RELION 1.4 PROJECTION MATCHING RELION 1.4 6 RELION 1.4 emd_7548.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 -160 -160 -160 320 320 320 393.6 393.6 393.6 90.0 90.0 90.0 X Y Z -0.06459818 0.15707785 -0.000014253706 0.005027618 1.23 1.23 1.23 0.0218 AUTHOR ::::EMDATABANK.org::::EMD-7548:::: Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc REAL emd_7548_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 -160 -160 -160 320 320 320 393.6 393.6 393.6 90.0 90.0 90.0 X Y Z -0.03561537 0.11417999 -0.000013743218 0.0041820337 1.23 1.23 1.23 EMDB ::::EMDATABANK.org::::EMD-7548:::: Additional map