2025-05-21 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name AUTHOR_SUPPORTING_EVIDENCE pdbx_audit_support _pdbx_audit_support.funding_organization DATABASE_REFERENCES chem_comp_atom chem_comp_bond citation database_2 _citation.country _database_2.pdbx_DOI _database_2.pdbx_database_accession STRUCTURE_SUMMARY em_admin em_software pdbx_entry_details _em_admin.last_update _em_software.name RCSB RCSB 2017-10-11 2017-11-15 2017-11-15 2025-05-21 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM082946-07S1, 229 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM082946 United States National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) 5T32AI007110-34 United States National Institutes of Health/National Cancer Institute (NIH/NCI) CA029303 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) U24GM116792 United States Single particle cryo-EM structure determination of the LuIII capsid protein Pittman NC Agbandje-McKenna M Parvoviridae, VP2 capsid protein, VIRUS LIKE PARTICLE Pittman N Misseldine A Geilen L Halder S Smith JK Kurian J Chipman P Janssen M Mckenna R Baker TS D'Abramo A Cotmore S Tattersall P Agbandje-McKenna M Atomic Resolution Structure of the Oncolytic Parvovirus LuIII by Electron Microscopy and 3D Image Reconstruction. Viruses CH 9 2017 29084163 doi:10.3390/v9110321 1999-4915 6b9q FULLOVERLAP LuIII virus LuIII virus 0 1
Overexpression of VP2 in Sf9 cells
LuIII virus unidentified 3.9 VP 280.0 1 VIRUS-LIKE PARTICLE SPECIES false true Capsid protein VP2 Parvovirus LuIII 0.065489953 60 Spodoptera frugiperda LEVO MSDGTDQSDSGNAVQSAARVERAADGPGGSGGGGSGGGGVGVSTGSYDNQTHYKFLGDGWVEITAYSTRMVHLNMPKSEN YCRVRVHNTNDTGTASHMAMDDAHEQIWTPWSLVDANAWGVWFQPSDWQYISNNMIHINLHSLDQELFNVVIKTVTEQNT GAEAIKVYNNDLTAAMMVALDSNNILPYTPAIDNQETLGFYPWKPTIPSPYRYYFSCDRNLSVTYKDEAGTITDTMGLAS GLNSQFFTIENTQRINLLRTGDEYATGTYYFDTEPIRLTHTWQTNRHLGQPPQITELPSSDTANATLTARGYRSGLTQIQ GRNDVTEATRVRPAQVGFCQPHDNFETSRAGPFKVPVVPADITQGLDHDANGSLRYTYDKQHGQSWASQNNKDRYTWDAV NYDSGRWTNNCFIQSVPFTSEPNANQILTNRDNLAGKTDIHFTNAFNSYGPLTAFPHPAPIYPQGQIWDKELDLEHKPRL HTQAPFVCKNNAPGQLLVRLAPNLTDQYDPNSSNLSRIVTYGTFFWKGKLTLKAKMRPNATWNPVFQISATNQGTNDYMS IERWLPTATGNITNVPLLSRPVARNTY P36310 singleParticle particle 0.75 7.5 0.1 C4H11NO3 Tris 0.5 NaCl sodium chloride 0.002 MgCl2 magnesium chloride 0.008 CaCl2 calcium chloride Quantifoil R2/4 COPPER 200 CARBON CONTINUOUS 2.0 GLOW DISCHARGE ETHANE 95 277
This sample was monodisperse.
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 GIF post-column filter GATAN K2 SUMMIT (4k x 4k) COUNTING 2-30 1.5 1 20142 PHASE FLIPPING AND AMPLITUDE CORRECTION
Ab initio random model calculation by AUTO3DEM
 3.17 FSC 0.143 CUT-OFF Auto3DEM 18134 RANDOM ASSIGNMENT PROJECTION MATCHING emd_7071.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 359 359 359 -179 -179 -179 359 359 359 381.976 381.976 381.976 90.0 90.0 90.0 Y X Z -7.755486 14.711995 -0.000000002758523 1.0 1.064 1.064 1.064 1.0 AUTHOR The capsid structure for the oncolytic parvovirus LuIII determined by single-particle electron microscopy to 3.17 Angstrom resolution