Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin

2026-09-09 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY DATABASE_REFERENCES citation citation_author em_admin _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _em_admin.last_update EXPERIMENTAL_SUMMARY citation citation_author em_admin _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _em_admin.last_update RCSB RCSB 2025-05-13 2026-05-27 2026-05-27 2026-09-09 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) United States Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin Cheng J Cale EM Longo N Sutton MS Lei H Huang R Morton AJ Lang ZC Morano NC Roark RS Becker JE Tsybovsky Y Li N Zhang B Du H Rubin S Shapiro L Pierson TC Doria-Rose NA Kwong PD Zhou T broadly neutralizing antibody, cryo-EM, hemagglutinin, high mannose, homotypic interactions, influenza A virus, multimeric recognition, N-linked glycan, ANTIVIRAL PROTEIN, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex Cheng J Cale EM Maghsoudi A Sutton MS Longo NS Gillespie RA Wang L Kosik I Chong S Yasuhara A Bylund T Schon A Tripathi P Tsybovsky Y Lei H Morano NC Lupatkin AB Morton AJ Lang ZC Becker JE Frascilla IR Lee M Li N Liu C Roark RS Shen CH Teng IT Van Wazer DJ Wang D Wu L Ahlsen G Castro M Du H Ernandes MJ Li T Lin BC Louder MK McKee K Merriam JS O'Dell S Ou L Pletnev S Prikryl D Qiu Q Rubin S Sastry M Schmidt SD Shajahan A Shiakolas AR Srivatsan S Zhang B Zhou Q Connors M Gall JG Guo Y Huang RK Huang Y Koup RA Lei QP Mascola JR Rawi R Serebryannyy L Shapiro L Sheng Z Ho DD Wilson PC Yewdell JW Pierson TC Kanekiyo M Doria-Rose NA Kwong PD Zhou T Canonical Antibodies Adopt Distinct Binding Modes to Recognize Viral Glycan Shields. Adv Sci DE e77172 e77172 2026 42598737 doi:10.1002/advs.77172 2198-3844 EMD-49964 consensus EM volume

Global map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemaglutinin

EMD-48426 focused EM volume

Local map of six VRC35 Fabs bound to influenza H3N2 Victoria 2011 hemaglutinin head

EMD-48427 focused EM volume

Local map of dimeric VRC35 Fabs bound to N-linked glycans N126, N165, and N246 on influenza H3N2 Victoria 2011 hemaglutinin head

9om5 FULLOVERLAP EMDB EMD-49964 consensus EM volume

Global map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemaglutinin

EMDB EMD-48426 focused EM volume

Local map of six VRC35 Fabs bound to influenza H3N2 Victoria 2011 hemaglutinin head

EMDB EMD-48427 focused EM volume

Local map of dimeric VRC35 Fabs bound to N-linked glycans N126, N165, and N246 on influenza H3N2 Victoria 2011 hemaglutinin head

EMDB EMD-70607 associated EM volume

Composite map of six VRC35 Fabs and MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin

Complex of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin Complex of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin 0 1 2 3 4 5 6 Homo sapiens Hemagglutinin Influenza A virus 0.038937195 3 Homo sapiens LEVO MKTIIALSHILCLVFAQKLPGNDNSTATLCLGHHAVPNGTIVKTICNDQIEVTNATELVQNSSIGEICDSPHQILDGENC TLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSACIRRSN NSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIWGVHHPGTDKDQIFLYAQSSGRITVSTKRSQQAVIPNIGSRPRIR NIPSRISIYWTIVKPGDILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRITYGA CPRYVKQSTLKLATGMRNVPEKQRRRRR A0A5P1MU07 Hemagglutinin Influenza A virus 0.025410278999999997 3 Homo sapiens LEVO RGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGRGQAADLKSTQAAIDCINGKLNRLIGKTNEKFHQIEKEFSEVEGRIQD LEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTKKQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDH DVYRDEALNNRFQIKGVSGLEVLFQGPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH A0A2P1E3C0 MEDI8852 Fab heavy chain Homo sapiens 0.024413189 3 Homo sapiens LEVO QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSYNAVWNWIRQSPSRGLEWLGRTYYRSGWYNDYAESVKSRITINPDTSKN QFSLQLNSVTPEDTAVYYCARSGHITVFGVNVDAFDMWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYF PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP MEDI8852 Fab light chain Homo sapiens 0.022450831999999997 3 Homo sapiens LEVO MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDF ATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQD SKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE VRC35 Fab heavy chain Homo sapiens 0.023909069999999998 6 Homo sapiens LEVO QVQLRQWGAGLVKPGETLSVTCELYGDSLRDFYWTWVRQAPGKPLQWVGEINVALNYKYNPSVRMTISVDEPKNQFTLKI FYTTAADTATYFCARGRGTVATELAMWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK VRC35 Fab light chain Homo sapiens 0.024033865 6 Homo sapiens LEVO NIVLTQTALSAPVVLGQPASISCRSSETLHHSDGRTYLSWLHQGRGQPPRLLLYHISQRSFGVSDRISGRGAGTNFTLDI SKVEPEDAGLYYCMQATQFPRTFGPGTVLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 3 NAG alpha-D-mannopyranose 0.000180156 2 MAN singleParticle particle 7.4 ETHANE TFS KRIOS FLOOD BEAM DARK FIELD FIELD EMISSION GUN 300 1.0 2.5 GATAN K3 BIOQUANTUM (6k x 4k) 54.5 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 5JW4 3.4 FSC 0.143 CUT-OFF 1780000 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_70607.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 420 420 420 0 0 0 420 420 420 348.6 348.6 348.6 90.0 90.0 90.0 Z Y X -21.399913999999999 38.508290000000002 0.011505172 1.3756088 0.83000004 0.83000004 0.83000004 2.0 AUTHOR ::::EMDATABANK.org::::EMD-70607::::