2024-03-13 REL RCSB RCSB RCSB 2017-09-04 2017-11-01 2017-11-01 2024-03-13 Human alpha-V beta-3 Integrin (open conformation) in complex with the therapeutic antibody LM609 Borst AJ James ZN alpha-V beta-3 integrin, LM609, vitaxin, abegrin, SIGNALING PROTEIN Borst AJ James ZM Zagotta WN Ginsberg M Rey FA DiMaio F Backovic M Veesler D The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alpha V beta 3 Integrin via Steric Hindrance. Structure UK 25 1732 1739.e5 2017 29033288 doi:10.1016/j.str.2017.09.007 1878-4186 2005 STRUE6 EMD-7011 other EM volume
EM Density Map of alpha-V beta-3 Integrin Bent State bound to LM609 Fab
 EMD-7012 other EM volume
EM Density Map of alpha-V beta-3 Integrin Intermediate State bound to LM609 Fab
 6avu FULLOVERLAP Quaternary complex of human alpha-V beta-3 integrin with the Fab LM609 Quaternary complex of human alpha-V beta-3 integrin with the Fab LM609 0 1 2 3 4 Homo sapiens 0.23 Integrin alpha-V Homo sapiens 0.10589418799999999 1 Drosophila melanogaster LEVO FNLDVDSPAEYSGPEGSYFGFAVDFFVPSASSRMFLLVGAPKANTTQPGIVEGGQVLKCDWSSTRRCQPIEFDATGNRDY AKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSQDIDADGQGFCQGGFS IDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFV SGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQ RASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSM PPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLK ADGKGVLPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFME YRLDYRTAADTTGLQPILNQFTPANISRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYIGDDNPLTLIVKAQNQGEGAYE AELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSS NLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHIFLPIPNWEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWP YKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKISSLQTTEKNDTVAGQGERDHLITKRDLALSEGDIHTLGCGVAQCL KIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQP P06756 Integrin beta-3 Homo sapiens 0.076523125 1 Drosophila melanogaster LEVO GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQV TQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKP VSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRN DASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQN YSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIE AKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRP SQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNC TTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIE SVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPD P05106 Fab LM609 heavy chain Mus musculus 0.027223099999999997 1 Drosophila melanogaster LEVO EVQLEESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQIPEKRLEWVAKVSSGGGSTYYLDTVQGRFTISRDNAKNTLY LQMSSLNSEDTAMYYCARHNYGSFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGASDDDDKAGWSHPQFEKGGG SGGGSGGGSWSHPQFEK Fab LM609 light chain Mus musculus 0.023628977 1 Drosophila melanogaster LEVO ELVMTQTPATLSVTPGDSVSLSCRASQSISNHLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET EDFGMYFCQQSNSWPHTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC singleParticle particle 8.0 NEGATIVE Uranyl formate C-flat 2/0.5 COPPER 400 CARBON CONTINUOUS GLOW DISCHARGE FEI TECNAI 12 FLOOD BEAM BRIGHT FIELD LAB6 120 GATAN ULTRASCAN 4000 (4k x 4k) 30.0 1 35.0 FSC 0.5 CUT-OFF 650 NOT APPLICABLE NOT APPLICABLE emd_7013.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 144 144 144 -72 -72 -72 144 144 144 461.5776 461.5776 461.5776 90.0 90.0 90.0 X Y Z -17.804943000000002 27.296092999999999 0.00656212 0.9377068 3.2054 3.2054 3.2054 3.7 AUTHOR Human alpha-V beta-3 Integrin (open conformation) in complex with the therapeutic antibody LM609 FLEXIBLE FIT REAL