2020-01-01 REL PDBj PDBj PDBj 2018-07-03 2018-08-15 2019-02-27 2020-01-01 Ministry of Science and Technology (China) 2016YFA0501100 China National Natural Science Foundation of China 31470721 China National Basic Research Program of China (973 Program) 2015CB910102 China The asymmetric cryo-EM reconstruction of filamentous bacteriophage IKe Xu JW Dayan N Goldbourt A Xiang Y Xu J Dayan N Goldbourt A Xiang Y Cryo-electron microscopy structure of the filamentous bacteriophage IKe. Proc. Natl. Acad. Sci. U.S.A. US 116 5493 5498 2019 30819888 doi:10.1073/pnas.1811929116 1091-6490 0040 PNASA6 EMD-6993 other EM volume
6993 is the 5-fold symmetry reconstruction of filamentous phage IKe
 EMD-6994 associated EM volume Filamentous phage Filamentous phage 0 1 Filamentous phage IKe Escherichia coli A527 64.0 VIRION SPECIES false false The asymmetric reconstruction of filamentous bacteriophage IKe, including major coat protein shell and inner DNA core. Filamentous phage IKe AEPNAATNYATEAMDSLKTQAIDLISQTWPVVTTVVVAGLVIRLFKKFSSKAV other helical filament 7.5
50 mM Tris at pH 7.5, 10 mM MgCl2, 100 mM NaCl
 Quantifoil R1.2/1.3 COPPER 200 ETHANE FEI VITROBOT MARK IV
FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 40.0 1 16.77 38.52 C1 4.5 FSC 0.143 CUT-OFF RELION 2.0
The asymmetric reconstruction of filamentous bacteriophage IKe. The five equivalent orientation positions are generated after helical reconstruction (EMD-6993). The capsid density subtracted images are performed no sampling 3D classification. The best particle with high likelihood value are used for asymmetric reconstruction, which including outer helical shell and inner DNA core.
53784 Gctf 2HI5 NOT APPLICABLE RELION 2 emd_6994.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 240 240 240 0 0 0 240 240 240 312.0 312.0 312.0 90.0 90.0 90.0 X Y Z -0.057654694 0.13232106 0.0005113882 0.005149029 1.3 1.3 1.3 0.05 AUTHOR The asymmetric reconstruction of filamentous bacteriophage IKe AB INITIO MODEL REAL