2024-03-27 REL PDBj PDBj PDBj 2018-02-05 2018-10-24 2018-10-24 2024-03-27 the Ministry of Education, Culture, Science, Sports, and Technology 26892028 Japan Japan Science and Technology Agency JPMJPR13L9 Japan Japan Agency for Medical Research and Development 17fk0108128h0001 Japan the Ministry of Education, Culture, Science, Sports, and Technology 16H06429 Japan the Ministry of Education, Culture, Science, Sports, and Technology 16K21723 Japan the Ministry of Education, Culture, Science, Sports, and Technology 16H06434 Japan Japan Society for the Promotion of Science Japan Daiichi Sankyo Foundation of Life Science Japan Japan Agency for Medical Research and Development Japan Ebola virus nucleoprotein-RNA complex Sugita Y Matsunami H Kawaoka Y Noda T Wolf M ebolavirus, RNA, nucleoprotein, nucleocapsid, helical, VIRAL PROTEIN Sugita Y Matsunami H Kawaoka Y Noda T Wolf M Cryo-EM structure of the Ebola virus nucleoprotein-RNA complex at 3.6 angstrom resolution. Nature UK 563 137 140 2018 30333622 doi:10.1038/s41586-018-0630-0 1476-4687 0006 NATUAS 5z9w FULLOVERLAP Ebolavirus nucleoprotein RNA complex (biological assembly) Ebolavirus nucleoprotein RNA complex (biological assembly) 0 1 2 Ebola virus - Mayinga, Zaire, 1976 0.166 Ebolavirus nucleoprotein (residues 19-406) Homo sapiens 0.043496086 1 Homo sapiens LEVO MDYHKILTAGLSVQQGIVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKY LEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQV HAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKT ERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGE QYQQLREAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNEISFQQTNAMVTLRKERLAKLT RNA (6-MER) synthetic construct 0.001792037 1 UUUUUU helical helicalArray 0.3 7.8 10.0 C4H12ClNO3 Tris-HCl 150.0 NaCl sodium chloride 1.0 C10H12O8CaN2Na2x2H2O EDTA C-flat-1.2/1.3 4C COPPER 400 CARBON HOLEY 150.0 PLASMA CLEANING OTHER
Gatan Solarus
 ETHANE 100 289 FEI VITROBOT MARK IV
3 second blot, 2.5uL.
FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 0.8 0.8 4.0 4.0 105000.0 47619.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN 77.0 100.0 0.1 GIF Quantum LS
nanoprobe, parallel beam illumination
GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 7676 7420 1-75 1 2467 15.0 105.0
frame alignment and dose weighting using motioncor2
 1
frame alignment and integration with motioncor2 incl. dose weighting and 2x Fourier cropping
3 FOURIER SPACE 3.6 FSC 0.143 CUT-OFF RELION 2.1 117552 232490 EMAN2 2.1 e2helixboxer.py
cylinder created in SPIDER
 PROJECTION MATCHING RELION 2.1
RELION
 emd_6903.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 417.0 417.0 417.0 90.0 90.0 90.0 X Y Z -6.9264145 14.411011999999999 0.000000002842075 1.0 1.39 1.39 1.39 2.5 AUTHOR Ebolavirus nucleoprotein RNA complex (biological assembly) AB INITIO MODEL REAL