2018-04-11 REL PDBj PDBj PDBj 2018-01-22 2018-04-11 2018-04-11 2018-04-11 Nucleosome with ALB1 enhancer DNA sequence, no symmetry applied Takizawa Y Tanaka H Machida S Koyama M Maehara K Ohkawa Y Wade PA Wolf M Kurumizaka H Takizawa Y Tanaka H Machida S Koyama M Maehara K Ohkawa Y Wade PA Wolf M Kurumizaka H Cryo-EM structure of the nucleosome containing theALB1enhancer DNA sequence. Open Biol UK 8 2018 29563192 doi:10.1098/rsob.170255 2046-2441 EMD-6838 other EM volume
Nucleosome with ALB1 enhancer DNA sequence, C2 symmetry
 EMD-6898 associated EM volume
Nucleosome with ALB1-DNA sequence
 Nucleosome with ALB1-DNA sequence, no symmetry applied Nucleosome with ALB1-DNA sequence, no symmetry applied 0 Homo sapiens Escherichia coli pET15b-H3.1, pET15b-H4, pET15b-H2A, pET15b-H2B, pGEM-T-Easy-(186 base-pair mouse ALB1 enhancer DNA) .2 singleParticle particle .8 7.5 20.0 (HOCH2)3CNH2 Tris-HCl 1.0 Dithiothreitol DTT Quantifoil R1.2/1.3 COPPER 200 CARBON HOLEY 100.0 PLASMA CLEANING OTHER 9.33
Gatan Solarus
 ETHANE 100 289 FEI VITROBOT MARK IV
3 second blot, 2.5uL.
sample was monodisperse
 FEI TALOS ARCTICA FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 50.0 2.7 -1.5 -1.5 -3.0 -3.0 73000. 100000. FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN 77.0 100.0 0.1
nanoprobe, parallel beam illumination
FEI FALCON III (4k x 4k) INTEGRATING 4096 4096 14.0 1-40 1 2312 2.0 80.0 1
frame alignment and integration with motioncor2 incl. dose weighting
1182985 CTFFIND 4.1
deconvolution in RELION
PDB 3LZ0 low-pass filtered to 60A.
 4 C1 FOURIER SPACE 4.5 FSC 0.143 CUT-OFF RELION 2.1 139343 PROJECTION MATCHING RELION 2.1 PROJECTION MATCHING RELION 2.1 12 52212. RELION 2.1 emd_6898.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 140 140 140 0 0 0 140 140 140 196.0 196.0 196.0 90.0 90.0 90.0 X Y Z -8.849982000000001 15.600209 0.000000004422986 1. 1.4 1.4 1.4 5.7 AUTHOR Nucleosome with ALB1 enhancer DNA sequence, no symmetry applied