REL RCSB RCSB RCSB 2015-12-17 2016-02-17 2016-03-09 2016-03-09 Cryo-electron microscopy structure of ribosome-bound initiation factor 2 70S IC II state Sprink T Ramrath DJF Yamamoto H Yamamoto K Loerke J Ismer J Hildebrand PW Scheerer P Buerger J Mielke T Spahn CMT translation initiation, ribosome, initiation, Initiation Factor 2, 70S initiation complex, prokaryotes, GTPase, translation GTPAse Sprink T Ramrath DJF Yamamoto H Yamamoto K Loerke J Ismer J Hildebrand PW Scheerer P Buerger J Mielke T Spahn CMT Structures of ribosome bound initiation factor 2 reveal the mechanism of subunit association SCI ADV 2 e1501502 e1501502 2016 3jcj FULLOVERLAP Escherichia coli Initiation Factor 2 stalled on Escherichia coli 70S ribosomes by the non-hydrolysable GTP analogue GDPNP in the presence of fMet-tRNAiMet and mRNA Escherichia coli Initiation Factor 2 stalled on Escherichia coli 70S ribosomes by the non-hydrolysable GTP analogue GDPNP in the presence of fMet-tRNAiMet and mRNA 3 2.5 2.6 70S ribosome false Escherichia coli 2.5 2.6 ribosome-prokaryote: ALL fMet-tRNAiMet Escherichia coli TRANSFER DOUBLE HELIX false Initiation Factor 2 Escherichia coli 0.097 0.097
bound to GNPPNP
1 true Escherichia coli pQE-60 P0A705 singleParticle particle 7.5
20 mM HEPES-KOH, pH 7.5, 15 mM magnesium acetate, 150 mM potassium acetate, 4 mM 2-mercapthoethanol, 2 mM spermidine, 0.05 mM spermine
Quantifoil R3-3 Cu 300 mesh with 2 nm carbon support film
 ETHANE 100 FEI VITROBOT MARK I Blot for 2-4 seconds before plunging. FEI POLARA 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.0 0.64 7.18 31000.0 39000.0 GATAN LIQUID NITROGEN 2013-08-26 GATAN K2 SUMMIT (4k x 4k) 918 20
Automated data collection using Leginon
 FEI POLARA 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.0 0.19 7.57 31000.0 39000.0 GATAN LIQUID NITROGEN 2015-06-10 GATAN K2 SUMMIT (4k x 4k) 2797 20
Automated data collection using Leginon
To avoid overfitting, the data was refined in a resolution-limited scheme using SPIDER.
CTFFIND4
 3.7 OTHER EMAN2, CTFFIND4, SPIDER, SPARX
Final maps were calculated from two combined datasets. To avoid overfitting, the data were refined in a resolution-limited scheme using SPIDER.
54585 emd_6559.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 369.0 369.0 369.0 90.0 90.0 90.0 X Y Z -6.02793121 13.34954739 0.09076034 0.65751249 1.025 1.025 1.025 2.2 AUTHOR Reconstruction of the 70S-fMet-tRNAiMet-IF2-GDPNP complex, IC II state
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