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                        <description>Metalloprotein remediation</description>
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        <sites>
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        <key_dates>
            <deposition>2025-06-11</deposition>
            <header_release>2025-10-08</header_release>
            <map_release>2025-10-08</map_release>
            <update>2026-08-12</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>Japan Society for the Promotion of Science (JSPS)</funding_body>
                <code>JP23K14211, JP22H04916, and JP23H02423</code>
                <country>Japan</country>
            </grant_reference>
        </grant_support>
        <title>PSI-LHCI of Euglena gracilis strain Z</title>
        <authors_list>
            <author>Kato K</author>
            <author>Nakajima Y</author>
            <author>Shen JR</author>
            <author>Nagao R</author>
        </authors_list>
        <keywords>Photosystem I, ELECTRON TRANSPORT, PHOTOSYNTHESIS</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author ORCID="0000-0001-9846-5903" order="1">Kato K</author>
                    <author ORCID="0000-0002-0529-8075" order="2">Nakajima Y</author>
                    <author order="3">Sakamoto R</author>
                    <author ORCID="0000-0003-1911-7308" order="4">Kumazawa M</author>
                    <author ORCID="0000-0003-0241-8008" order="5">Ifuku K</author>
                    <author order="6">Ishikawa T</author>
                    <author ORCID="0000-0003-4471-8797" order="7">Shen JR</author>
                    <author ORCID="0000-0003-1100-7462" order="8">Takabayashi A</author>
                    <author ORCID="0000-0001-8212-3001" order="9">Nagao R</author>
                    <title>Structural insights into the divergent evolution of a photosystem I supercomplex in Euglena gracilis.</title>
                    <journal_abbreviation>Sci Adv</journal_abbreviation>
                    <country>US</country>
                    <volume>11</volume>
                    <first_page>eaea6241</first_page>
                    <last_page>eaea6241</last_page>
                    <year>2025</year>
                    <external_references type="PUBMED">41171917</external_references>
                    <external_references type="DOI">doi:10.1126/sciadv.aea6241</external_references>
                    <external_references type="ISSN">2375-2548</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <pdb_list>
            <pdb_reference>
                <pdb_id>9vfj</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
                </relationship>
            </pdb_reference>
        </pdb_list>
        <other_db_list>
            <db_reference>
                <db_name>EMDB</db_name>
                <accession_id>EMD-65026</accession_id>
                <content_type>associated EM volume</content_type>
                <details>PSI-LHCI of Euglena gracilis strain Z</details>
            </db_reference>
        </other_db_list>
    </crossreferences>
    <sample>
        <name>PSI-LHCI</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>PSI-LHCI</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>2</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>3</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>4</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>5</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>6</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>7</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>8</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>9</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>10</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>11</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>12</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>13</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>14</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>15</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>16</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>17</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>18</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>19</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">1.1</theoretical>
                </molecular_weight>
            </complex_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>Photosystem I P700 chlorophyll a apoprotein A1</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.08518359399999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>VYDNLIENYMTITPPEQQVKRVRVAFVSNPVETSFEKWSRPGHFSRLLSKGPNTTTWIWNLHADAHDFDNHTTDLEDISR
KVFSAHFGQLAIIEIWLSGMFFHGARFSNYEAWLLDPIHVKPSAQIVWPIVGQEILNGDVGGNFQGIQITSGLFQLWRSC
GITSEFQLYITALTGLIFSAVLFFAGWFHYHKAAPKLEWFQNVESMLNHHLSGLLGLGCLSWAGHQIHVSLPINKLLDSG
VNPAELPLPHDFILDKSLISQLYPSFSKGLAPFFTFHWSEYSDFLTFRGGLNNVTGGLWLTDVAHHHLALAVLFILAGHM
YKTNWKIGHDIKGLLESHTGPFTGQGHKGLYEIFTNSWHAQLSLNLAMMGSLSIIVAQHMYSMPPYPYIAIDYGTELSLF
THHYWIGGFCIVGAAAHAAIFMVRDYDPALNFNNLLDRVLLHRDAIISHLNWVCIFLGLHSFGLYIHNDTLSALGRPQDM
FSDSAIQLQPVFAQWIQNTHYLAPTLTAFNLVSPTTPVWGGDVVSISGKVAMMPIKLGTADFLVHHIHAFTIHVTVLILL
KGVLFSRSSRLIPDKASLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVAIFHFSWKMQSDVWGTVLANKVSHIT
GGNFSQGSLTINGWLRDFLWAQSSQVIQSYGSPLSAYGLMFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAP
NIQPRALSITQGRAVGVAHYLLGGIATTWSFFLARIISVG</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="2">
                <name>Photosystem I P700 chlorophyll a apoprotein A2</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.082780266</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MATKFPKFSQGLAQDPTTRRIWFGIATSHDFESHDGMTENNLYQKIFASHFGQLAIIFLWTSGNLFHVAWQGNFEQWIKD
PLHIRPIAHAISDPHFGQPAIEAFTRSQFPGPVNIAYSGVYQWWYTIGLRTNVDLYNGSMFLLFIATLALFAGWLHLEPK
YSPKVSWFKDAESRLNHHLSALFGLSSLAWSGHLIHVAIPESRGIHVRWDNFLSQLPHPSGLEPFFKGNWSLYSENPDSL
THVFGTASGAGTAVLTFLGGFHPETKSLWLTDIAHHHLAIAVLFIVAGHMYRTNFAIGHRIDDILNAHKAPSGKLGLGHF
GLYETINNSLHFQLGLALASLGVITSLVAQHMYSLSPYAFLIQDRTTMAALYTHHQYIAGFIMTGAFAHGAIFFIRDFDE
EKNKGNVLSRILDHKEAIISHLSWVTLFLGFHTLGLYVHNDVMQAFGTPEKQILIEPVFAQWIQSAHGKNIYELNILLSS
DSSNAFSASQAIWLPGWLNGINDKSTSLFLQIGPGDFLVHHAIALGLHTTTLILVKGALDARGSRLMPDKKDFGYSFPCD
GPGRGGTCDISAWDAFYLAVFWMLNTIGWTTFYWHWKHITLWQGNVGQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGM
NSLAVWGWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPITNVFKWTDKPVALSIVQARLVGLAHFSVGYVFT
YAAFLIASTSAKFG</string>
                    <external_references type="UNIPROTKB">P19431</external_references>
                </sequence>
                <ec_number>1.97.1.12</ec_number>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="3">
                <name>Photosystem I iron-sulfur center</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.008784116</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MSHSVKIYNTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCESACPTDFLSVRVYLGSETSRSMGLA
Y</string>
                    <external_references type="UNIPROTKB">P31556</external_references>
                </sequence>
                <ec_number>1.97.1.12</ec_number>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="4">
                <name>Photosystem I reaction center subunit II</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.07619621099999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>LAAGALFGLALSPSVASNYAAPSAVRASTTISAVRPVVFTGSYVRGVQTGRTTVVEATPNQEVETLASANNLWVTAAAAG
LAFSAASLVLALLRKPRSEETYSMLAEAAEVGKAPWTAPKLEDALKNEKARQKAEALSTQLPVFWDLRDALGEVPKSKFP
EVFARYKGSTGTLLSAAKTEEYYAITWTSPKTQIYELPTGGAAEMDEGLNIMYFARKEQCLALGAQLRTKFKPRIESFAI
YRVFPNGETQYLHPKDGVFPEKVNQGRTKANHNPRSIGENKEPASVKFTGTTPKDVQTEGAVAMFAETGEKAAKPAWTVP
DLADALKNTSAVAKAKGIATQLPTFWELRDALSEVPKSKFPEVFASYKGSTGTLLSAAEKEEKYVITWTSPKKQIFELPT
GGAAEMEEGENIFFFARKEQCLALGAQLRTAFKPRIENFQIFRVFPNGEVQYLHPKDGVFPEKVNQGRTKANHNPRSIGE
NAEPASVKFTGTTPKDVQTEGAVAMFAETGEKAAKPAWTVPNLSDALKNTAAVAKAKEIATQLPTFWELRDALSEVPKSK
FPEVFASYKGSTGTLLAAAEKEEKYVITWTSPKKQIFELPTGGAAEMEEGENIFYFARKEQCLALGAQLRTAFKPRIENF
QIFRVFPNGEVQYLHPKDGVFPEKVNAGRQQANHNARSIGENVEPASVKFSGSTPKDL</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="5">
                <name>Photosystem I reaction center subunit IV</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.017927294999999996</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>ECLFFFGQITMAFNNAMADPWFKFTAVSSATLMAIGCALMAIAELTAPQQQALYAAPAVQTRMITRLADDAAARVADRTQ
FIEEYKERRAEAPATPKAKAGPARGSTVKVTRPESYWYNQYGKVISVDESGAIRYPVVVRFEKENYQGVTTNNFALDELE
Y</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="6">
                <name>Photosystem I reaction center subunit III</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.035240191</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>QNLESKQLSIFFRAEHKMYRCNYQNLESKQWSMTAVLGVTALLSVSVGATAGFIASQPSTTSLYAPASTTTSISSVAAIP
VSQAAARAPVQAVPVSEAQSVEQSIYTEAPQASFNWAPVAALIALPTAIAAFLLRRSENEVKLATAGVAASAVLASGAMT
AMPANATEAILGLTPCAESAKFQKVLTKEVKALEKREKLYEPGSAPFQALEATKAKTQARFAKYAESGLLCGADGLPHLI
SDPGLAVKYGHAGETLIPTIGFLYVAGYIGTAGRTYLQEISTRQKPTQSEIIIDVPLATSIAFKSWDWPNKAVKELASGT
LLEDAKNVPVSRR</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="7">
                <name>Photosystem I reaction center subunit IX</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.004298091999999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MKYFTTYLSTAPVVAVLWFTLTASLLIEINRFFPDIL</string>
                    <external_references type="UNIPROTKB">P30394</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="8">
                <name>Photosystem I reaction center subunit XII</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.003445077</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MEITTNQVYIALLASLIPAFFAFKLGKSLNQ</string>
                    <external_references type="UNIPROTKB">P31479</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="9">
                <name>LHCI-1</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.052475848</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>LVGFVAAQTTSLHAPVVVRPVVQASTLAVPAARAGRANVLLRAGTESQIVPKNGFATKVNVAFVPLACGVGALAALVATL
VHKKEQPLAMLATSGEKRPTWFPGAEAPAWLTGEFPGDRGFDPCGLARDPVDFAKFRDSEVFHGRWAMLGLVGCLVPEVF
GNLGIAQLPAWYDAATVANTSNLDYLGNPNLVHASNVSFIALSTLLLMGPVEAWRWNGALASEAKSAERTTYPGGPFDPL
KLGASPELKLKEIKNGRLAMVGMFGFWAQSYVTGEGPLANLAAHLADPAHNNLLNTVAMFAASGEKRPTWFPGAEAPAWL
TGEYPGDRGFDPFGLAKDPEDFAKNRDSEVYHGRWAMLGLVGCLVPEVFGNLGIAQLPAWYEAGAVANTGSLDYLGNPNL
VHASNVPLIFFTTLLLFLPIEAWRWNGQIAPDAKSKEWTTYPGGPFDPLKLGASPELKLKEIKNGRLAMVGMFGFWAQSY
VTGEGPLANLAA</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="10">
                <name>LHCI-2</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.06536149599999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>IFFRHSLLSSTHFKMPNNADAMKFGLAAGAAMGVIVYVLAGTASSTSLAATHVNIQQAPAVIPRMASVPSAYTIATNPIG
ASARVVDANYESTDYLTLPATEKSTMGSLLMIAAAGVAAAVAFVWKSVPRQQDSVINVPLLPVSVATMATSGKKSKAPAA
DNLSQWYGPDRAKWLGPLTGQVPAYLTGELPGDYGWDTAGLGADPVTLARYREAEVIHARWAMLGALGVVTPELLAGNGV
PFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLA
NDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGFAMFAATGSKWYGPNRPKWL
GPLSGGAVPEYLKGEYAGDYGFDTAGLAADPKLFQRYRDAELQNGRWAMLGVLGCLAPEVLSNVFGVPYPEPVWFKTGAT
ILNGGSIDYLANPKLIHASNLLLTLVLELVFFFAAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAKVKEVK
NGRLAMLAMLGLFVQAGVTGQSPLENLSAHLANPGVNFWTSYAPTLAMFAASGRKSAAPK</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="11">
                <name>LHCI-3</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.046443383</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>VYFFSKKMASSVPLKQLSIVLLSGAAIACIFISDASTSLSTVSPVVQSRTLQRIDNQLKASRIQTYPGTTLQLRTASSTT
LNEVFGKEGKFQLSLLAPLLSTLGAAVAIFMWNKKTQEETAMFAATGEKLSDWYGPNRKLFLGPLSDGAPEHLKGELPGD
YGFDVLGLATQPTRLERYRQGEIINGRWAMLGIVGCIVPELLARNYGVPFPEPVWFKTGATVFSEEGLNYLGNPSLIHAK
SIAAILVTEILFVGAAEAFRVSGGPLGPATDLVYPGKAFDPLGLSKDETAFAELKVKEVKNGRLAMLGMLGLFMQGFATG
KGPLQNLADHLADPTGANIITFHQRVLSDLGGVAMFAATGEKLSDWYGPNRKLFLGPLSDGAPEHLKGELPGDYGFDVLG
LATQPTRLERYRQGEIINGRWAMLGIVGCIV</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="12">
                <name>LHCI-4</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.044705487999999995</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>IPELLGRGVWFQAGESVDAAQLGLYFMFLAAPSEYWRGNGGFGWDQKEKKAGNRIYPGFDPLKMTSDETKTKEIKNGRLA
MIAFLGLVSQANTTGVSPFQNLAAVFGASPVAMFTTTGEKRPLWFPGAKPPAYLTGEFPADRGFDPLGLAKDPATYERMR
SSEVFHSRLAMLGVVGSLIPELQGQGAWYTLSEKQFGPGPNGEVIGFTELALIGMLFSYPLEYWRGNGGFGWFEEKGDRT
YPGFDPLQLTSEYTKTAEIKNGRLAMSALLGFAVQHATTGASPLENWAATTGGSVAMFAAAGERATWFPGAKAPPHLTGE
FPGDRGFDPVDFAANPESFERMRASEVFHGRMAMLGVAGCLIPELLGRGVWFQAGESVDAAQLGLYFMFLAAPSEYWRGN
GGFGWDQKEKK</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="13">
                <name>Chloroplast light-harvesting complex I protein</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.02713065</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>WRGNGGFGWFEEKGDRTYPGFDPLQLTSEYTKTAEIKNGRLAMSALLGFAVQHATTGASPLENWAATTGGSVAMFAAAGE
RATWFPGAKAPPHLTGEFPGDRGFDPVDFAANPESFERMRASEVFHGRMAMLGVAGCLIPELLGRGVWFQAGESVDAAQL
GLYFMFLAAPSEYWRGNGGFGWDQKEKKAGNRIYPGFDPLKMTSDETKTKEIKNGRLAMIAFLGLVSQANTTGVSPFQNL
AAVFGASPVAML</string>
                    <external_references type="UNIPROTKB">A8HPE4</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="14">
                <name>LHCI-6</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.09566098399999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>YFFSDKKMYGTVSASSSNKATSTVAVCACAAVFAVAGFVAVQPRSLYAPAAVRPVVQATMTTVPVAHSVQSNTVAAQIQS
RPLNVESNVFAQVGSTFAPIALGVGALAAFVAALIHKGQQPVAMAASSGERLLWIPNATPPAHLTGEFPGDRGFDPLGLS
KDPKVFARMRISEVFHGRLAMLGIVGCVGQEWLFNKGAWFDYSDFDLPRLGLIALQVIAPLEYWRGNGGFSWNGNDGPDR
SYPGFDPLGLTTEDTKLREIKNGRLAMSAMLGLEVQSHITGKSPLTNLGDHLSSPFTANILTGGGSVAMFSTSGKVDRPL
WFPGGYAPSYLTGQYFGDRGFDPAGLAADPKVFERMRVSEVYHGRLAMLAIVGAVVPDILGKGAWYEAAQNAGIGVNEVA
VFTAAYGVVEVARGLKANSDPTKNYPGFDPLKLTTDYTKEAEIKNGRLALTGMLGLEVQRHVTGVSPLVNLVEHVKHPLN
HNIAESVMHQWPVAMFAATGHKDGVWFPGAQPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGSI
VPELLGKGAWFEVGNSVDGIKLGFILMAIAAPTEYWRGNGGFNWDKGTADRSYPGFDPLKLTTDYTKAAEIKNGRLAMTG
LLGLTFQYLATGESPLANLAAHLANPVGANITTTLAMYSTSGEKYRGLWFPNITPPAYLTGEFPADRGFDPAGLAADPKV
YERMRVAEVFNGRLAMLAIVGCVYPELLGNGVWFEVWNKVDFYRFALISLQVVAPLEYWRGNGGFGWDGEEKYDRSYPGF
DPCNLTTEYTKAAEIKNGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPLAANIGASLAHPWPPVAMFATTGHKDGVWF
PGAQPPAHL</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="15">
                <name>LHCI-7</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.066506625</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>EIKNGRLAMTAMLGLEVQSHITGKSPLTNLSEHLSHPLSANLLTGGGSLAMFSTAGQKTDRRPLWFPGGYAPSWLTGQHF
GDRGFDPAGLAADPKVFERMRVSEVYHGRLAMLAIVGAVVPDIQGKGAWYEAAQSAGIGVNEVAVFTAAYGIAEVARGLK
ANSDPTSRYPGFDPLNLTTDYTKEAEIKNGRLALTAMLGLEVQRHVTGVSPLVNLVEHVKHPLGHNIAESVMHQWPVAMF
AATGHKDGVWFPGATPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGAIVPEVLGKGAWFEAGNS
VDGIKLGFIAMAIAAPTEYWRGNGGFNWDKGAADRSYPGFDPLKLTTDYTKAAEIKNGRLAMAGLLGLTFQYLATGESPL
ANLAAHLANPVGANITTTLAMYSTSGEKYRGLWFPNITPPAYLTGEFPADRGFDPAGLAADPKVYERMRIAEVFNGRLAM
LAIVGCVYPELLGNGVWFEVWNKVDFYRFALISLQVVAPLEYWRGNGGFGWDGEEKYDRSYPGFDPCNLTTEYTKAAEIK
NGRLAMIGMFGLEVQSHVTAQGPVANLIEHLRHPLAANIGANLAHPWPPVAMFATT</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="16">
                <name>LHCI-8</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.08914946099999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>FFSIEKKMYGAAHNSSSNKNATSIVAFFGCAAVFAVAGFVAAQPGALYAPASVRPAVASMTAAPAMMIQRPSSAVAATNV
QAQNVQGSGYHQVGATFAPIVLGVGAITAFVAALLHRGQKPVAMAATTGERLLWVPNATPPAHLTGEFPGDRGFDPLGLA
KDPKVYQRMRISEVFHGRLAMLGIVGCVAPELFFSKGAWFDYSDYDLNRLGLIALQVIAPLEYWRGNGGFSWDGNDGPDR
SYPGFDPLGLTNEETKLQEIKNGRLAMTAMLGLEVQSHITGKSPLTNLSEHLSHPLSANLLTGGGSLAMFSTAGQKTDRR
PLWFPGGYAPSWLTGQHFGDRGFDPAGLAADPKVFERMRVSEVYHGRLAMLAIVGAVVPDIQGKGAWYEAAQSAGIGVNE
VAVFTAAYGIAEVARGLKANSDPTSRYPGFDPLNLTTDYTKEAEIKNGRLALTAMLGLEVQRHVTGVSPLVNLVEHVKHP
LGHNIAESVMHQWPVAMFAATGHKDGVWFPGATPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVG
SIVPELLGKGAWFEVGNSVDGIKLGFILMAIAAPTEYWRGNGGFNWDKGTADRSYPGFDPLKLTTDYTKAAEIKNGRLAM
TGLLGLTFQYLATGESPLANLAAHLANPVGANITTTLAMYSTSGEKYRGLWFPNITPPAYLTGEFPADRGFDPAGLAADP
KVYERMRVAEVFNGRLAMLAIVGCVYPELLGNGVWFEVWNKVDFYRFALISLQVVAPLEYWRGNGGFGWDGEEKYDRSYP
GFDPCNLTTEYTKAAEIKNGRLAMIGMF</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="17">
                <name>LHCI-9</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.094434281</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>GFVAAQPGALYAPASVRPAVASMTAAPAMMIQRPSSAVAATNVQAQNVQGSGYHQVGATFAPIVLGVGAITAFVAALLHR
GQKPVAMAATTGERLLWIPNATPPAHLTGEFPGDRGFDPLGLAKDPKVYQRMRISEVFHGRLAMLGIVGCVAPELFFSKG
AWFDYSDYDLNRLGLIALQVIAPLEYWRGNGGFSWDGNDGPDRSYPGFDPLGLTNEETKLQEIKNGRLAMTAMLGLEVQS
HITGKSPLTNLSEHLSHPLSANLLTGGGSLAMFSTAGQKTDRRPLWFPGGYAPSWLTGQHFGDRGFDPAGLAADPKVFER
MRVSEVYHGRLAMLAIVGAVVPDIQGKGAWYEAAQSAGIGVNEVAVFTAAYGIAEVARGLKANSDPTSRYPGFDPLNLTT
DYTKEAEIKNGRLALTAMLGLEVQRHVTGVSPLVNLVEHVKHPLGHNIAESVMHQWPVAMFAATGHKDGVWFPGATPPAH
LTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLCMLAIVGAIVPEVLGKGAWFEAGNSVDGIKLGFIAMAIAAPTEY
WRGNGGFNWDKGAADRSYPGFDPLKLTTDYTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANLAAHLANPVGTNITTTL
AMYSTSGEKYRGLWFPNITPPAYLTGEFPADRGFDPAGLAADPKVYERMRIAEVFNGRLAMLAIVGCVYPELLGNGVWFE
VWNKVDFYRFALISLQVVAPLEYWRGNGGFGWDGEEKYDRSYPGFDPCNLTTEYTKAAEIKNGRLAMIGMFGLEVQSHVT
AQGPVANLIEHLRPCSWSVRLESYTPVCWHAPGFFQNFQRMGQRAPFQWGVTEPPSFIHTSATVNEGWWGSES</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="18">
                <name>LHCI-10</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.069436812</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MSAMLGLEVQSHITGKSPLTNLGDHLSSPFTANILTGGGSVAMFSTSGKVDRPLWFPGGYAPSYLTGQYFGDRGFDPAGL
AADPKVFERMRVSEVYHGRLAMLAIVGAVVPDILGKGAWYEAAQNAGIGVNEVAVFTAAYGVVEVARGLKANSDPTKNYP
GFDPLKLTTDYTKEAEIKNGRLALTGMLGLEVQRHVTGVSPLVNLVEHVKHPLNHNIAESVMHQWPVAMFAATGHKDGVW
FPGAQPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGAWFEVGNSVDGIKLGFIL
MAIAAPTEYWRGNGGFNWDKGTADRSYPGFDPLKLTTDYTKAAEIKNGRLAMTGLLGLTFQYLATGESPLANLAAHLANP
VGANITTTLAMYSTSGEKYRGLWFPNITPPAYLTGEFPADRGFDPAGLAADPKVYERMRVAEVFNGRLAMLAIVGCVYPE
LLGNGVWFEVWNKVDFYRFALISLQVVAPLEYWRGNGGFGWDGEEKYDRSYPGFDPCNLTTEYTKAAEIKNGRLAMIGMF
GLEVQNHVTAQGPVANLIEHLRHPLAANIGANLAHPWPPVAMFATTGHKDGVWFPGAQPPAHLTGEYPADRGFDPLSLAA
DPT</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="19">
                <name>LHCI-11</name>
                <natural_source database="NCBI">
                    <organism ncbi="3039">Euglena gracilis</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.112373086</theoretical>
                </molecular_weight>
                <number_of_copies>3</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>FFSDKKMYGTVSASSSNKATSTVAVCACAAVFAVAGFVAVQPRSLYAPAAVRPVVQATMTTVPVAHSVQSNTVAAQIQSR
PLNVESNVFAQVGSTFAPIALGVGALAAFVAALIHKGQQPVAMAASSGERLLWIPNATPPAHLTGEFPGDRGFDPLGLSK
DPKVFARMRISEVFHGRLAMLGIVGCVGQEWLFNKGAWFDYSDFDLPRLGLIALQVIAPLEYWRGNGGFSWNGNDGPDRS
YPGFDPLGLTTEDTKLREIKNGRLAMSAMLGLEVQSHITGKSPLTNLGDHLSSPFTANILTGGGSVAMFSTSGKVDRPLW
FPGGYAPSYLTGQYFGDRGFDPAGLAADPKVFERMRVSEVYHGRLAMLAIVGAVVPDILGKGAWYEAAQNAGIGVNEVAV
FTAAYGVVEVARGLKANSDPTKNYPGFDPLKLTTDYTKEAEIKNGRLALTGMLGLEVQRHVTGVSPLVNLVEHVKHPLNH
NIAESVMHQWPVAMFAATGHKDGVWFPGAQPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGSIV
PELLGKGAWFEVGNSVDGIKLGFILMAIAAPTEYWRGNGGFNWDKGTADRSYPGFDPLKLTTDYTKAAEIKNGRLAMTGL
LGLTFQYLATGESPLANLAAHLANPVGANITTTLAMYSTSGEKYRGLWFPNITPPAYLTGEFPADRGFDPAGLAADPKVY
ERMRIAEVFNGRLAMLAIVGCVYPELLGNGVWFEVWNKVDFYRFALISLQVVAPLEYWRGNGGFGWDGEEKYDRSYPGFD
PCNLTTEYTKAAEIKNGRLAMIGMFGLEVQSHVTAQGPVANLIEHLRHPLAANIGANLAHPWPPVAMFATTGHKDGVWFP
GATPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGAIVPEVLGKGAWFEAGNSVDGIKLGFIAMA
IAAPTEYWRGNGGFNWDKGAADRSYPGFDPLKLTTDYTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANLAAHLANPVG
ANITTTLA</string>
                </sequence>
            </protein_or_peptide>
            <ligand macromolecule_id="20">
                <name>CHLOROPHYLL A ISOMER</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000893489</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>CL0</formula>
            </ligand>
            <ligand macromolecule_id="21">
                <name>CHLOROPHYLL A</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000893489</theoretical>
                </molecular_weight>
                <number_of_copies>236</number_of_copies>
                <formula>CLA</formula>
            </ligand>
            <ligand macromolecule_id="22">
                <name>PHYLLOQUINONE</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000450696</theoretical>
                </molecular_weight>
                <number_of_copies>2</number_of_copies>
                <formula>PQN</formula>
            </ligand>
            <ligand macromolecule_id="23">
                <name>IRON/SULFUR CLUSTER</name>
                <molecular_weight>
                    <theoretical units="MDa">0.00035163999999999996</theoretical>
                </molecular_weight>
                <number_of_copies>3</number_of_copies>
                <formula>SF4</formula>
            </ligand>
            <ligand macromolecule_id="24">
                <name>BETA-CAROTENE</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000536873</theoretical>
                </molecular_weight>
                <number_of_copies>17</number_of_copies>
                <formula>BCR</formula>
            </ligand>
            <ligand macromolecule_id="25">
                <name>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</name>
                <molecular_weight>
                    <theoretical units="MDa">0.00072297</theoretical>
                </molecular_weight>
                <number_of_copies>14</number_of_copies>
                <formula>LHG</formula>
            </ligand>
            <ligand macromolecule_id="26">
                <name>UNKNOWN LIGAND</name>
                <number_of_copies>42</number_of_copies>
                <formula>UNL</formula>
            </ligand>
            <ligand macromolecule_id="27">
                <name>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</name>
                <molecular_weight>
                    <theoretical units="MDa">0.0009492989999999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>DGD</formula>
            </ligand>
            <ligand macromolecule_id="28">
                <name>(3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000582855</theoretical>
                </molecular_weight>
                <number_of_copies>26</number_of_copies>
                <formula>DD6</formula>
            </ligand>
            <ligand macromolecule_id="29">
                <name>water</name>
                <molecular_weight>
                    <theoretical units="MDa">1.8015e-05</theoretical>
                </molecular_weight>
                <number_of_copies>44</number_of_copies>
                <formula>HOH</formula>
            </ligand>
        </macromolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
            <specimen_preparation_list>
                <single_particle_preparation preparation_id="1">
                    <concentration units="mg/mL">2.5</concentration>
                    <buffer>
                        <ph>6.5</ph>
                        <component>
                            <concentration units="mM">20.0</concentration>
                            <name>MES</name>
                        </component>
                        <component>
                            <concentration units="%">0.03</concentration>
                            <name>Sucrose monolaurate</name>
                        </component>
                    </buffer>
                    <grid>
                        <model>Quantifoil R1.2/1.3</model>
                        <material>COPPER</material>
                        <mesh>300</mesh>
                        <support_film film_type_id="1">
                            <film_material>CARBON</film_material>
                            <film_topology>HOLEY</film_topology>
                        </support_film>
                    </grid>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                        <chamber_humidity units="percentage">100</chamber_humidity>
                        <chamber_temperature units="K">277</chamber_temperature>
                        <instrument>FEI VITROBOT MARK IV</instrument>
                    </vitrification>
                </single_particle_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <single_particle_microscopy microscopy_id="1">
                    <microscope>JEOL CRYO ARM 300</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <nominal_defocus_min units="µm">1.2</nominal_defocus_min>
                    <nominal_defocus_max units="µm">1.8</nominal_defocus_max>
                    <nominal_magnification>60000.0</nominal_magnification>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>GATAN K3 (6k x 4k)</film_or_detector_model>
                            <detector_mode>COUNTING</detector_mode>
                            <average_electron_dose_per_image units="e/Å^2">50.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </single_particle_microscopy>
            </microscopy_list>
            <singleparticle_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <particle_selection>
                    <number_selected>507565</number_selected>
                </particle_selection>
                <ctf_correction>
                    <software_list>
                        <software>
                            <name>CTFFIND</name>
                            <version>4.1</version>
                        </software>
                    </software_list>
                    <type>PHASE FLIPPING AND AMPLITUDE CORRECTION</type>
                </ctf_correction>
                <startup_model type_of_model="INSILICO MODEL">
                    <insilico_model>An initial model was generated de novo from the 2D classified good particles.</insilico_model>
                </startup_model>
                <final_reconstruction>
                    <algorithm>FOURIER SPACE</algorithm>
                    <resolution units="Å" res_type="BY AUTHOR">2.83</resolution>
                    <resolution_method>FSC 0.143 CUT-OFF</resolution_method>
                    <software_list>
                        <software>
                            <name>RELION</name>
                            <version>3.1</version>
                        </software>
                    </software_list>
                    <number_images_used>56060</number_images_used>
                </final_reconstruction>
                <initial_angle_assignment>
                    <type>MAXIMUM LIKELIHOOD</type>
                    <software_list>
                        <software>
                            <name>RELION</name>
                            <version>3.1</version>
                        </software>
                    </software_list>
                </initial_angle_assignment>
                <final_angle_assignment>
                    <type>MAXIMUM LIKELIHOOD</type>
                    <software_list>
                        <software>
                            <name>RELION</name>
                            <version>3.1</version>
                        </software>
                    </software_list>
                </final_angle_assignment>
                <final_three_d_classification>
                    <software_list>
                        <software>
                            <name>RELION</name>
                            <version>3.1</version>
                        </software>
                    </software_list>
                </final_three_d_classification>
            </singleparticle_processing>
        </structure_determination>
    </structure_determination_list>
    <map format="CCP4" size_kbytes="95552">
        <file>emd_65026.map.gz</file>
        <symmetry>
            <space_group>1</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
        <dimensions>
            <col>288</col>
            <row>288</row>
            <sec>288</sec>
        </dimensions>
        <origin>
            <col>0</col>
            <row>0</row>
            <sec>0</sec>
        </origin>
        <spacing>
            <x>288</x>
            <y>288</y>
            <z>288</z>
        </spacing>
        <cell>
            <a units="Å">216.57599</a>
            <b units="Å">216.57599</b>
            <c units="Å">216.57599</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-0.03249011</minimum>
            <maximum>0.075970955</maximum>
            <average>0.0005085148</average>
            <std>0.0036442357</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">0.752</x>
            <y units="Å">0.752</y>
            <z units="Å">0.752</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <level>0.011</level>
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-65026::::</label>
    </map>
    <interpretation>
        <modelling_list>
            <modelling>
                <initial_model>
                    <chain>
                        <source_name>Other</source_name>
                        <initial_model_type>experimental model</initial_model_type>
                    </chain>
                    <details>ModelAngelo</details>
                </initial_model>
                <refinement_protocol>FLEXIBLE FIT</refinement_protocol>
                <refinement_space>RECIPROCAL</refinement_space>
            </modelling>
        </modelling_list>
        <additional_map_list>
            <additional_map format="CCP4" size_kbytes="95552">
                <file>emd_65026_additional_1.map.gz</file>
                <symmetry>
                    <space_group>1</space_group>
                </symmetry>
                <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
                <dimensions>
                    <col>288</col>
                    <row>288</row>
                    <sec>288</sec>
                </dimensions>
                <origin>
                    <col>0</col>
                    <row>0</row>
                    <sec>0</sec>
                </origin>
                <spacing>
                    <x>288</x>
                    <y>288</y>
                    <z>288</z>
                </spacing>
                <cell>
                    <a units="Å">216.57599</a>
                    <b units="Å">216.57599</b>
                    <c units="Å">216.57599</c>
                    <alpha units="deg">90.0</alpha>
                    <beta units="deg">90.0</beta>
                    <gamma units="deg">90.0</gamma>
                </cell>
                <axis_order>
                    <fast>X</fast>
                    <medium>Y</medium>
                    <slow>Z</slow>
                </axis_order>
                <statistics>
                    <minimum>-0.022335764</minimum>
                    <maximum>0.06421867</maximum>
                    <average>0.0005141162</average>
                    <std>0.0029849953</std>
                </statistics>
                <pixel_spacing>
                    <x units="Å">0.752</x>
                    <y units="Å">0.752</y>
                    <z units="Å">0.752</z>
                </pixel_spacing>
                <contour_list>
                    <contour primary="true">
                        <source>AUTHOR</source>
                    </contour>
                </contour_list>
                <label>::::EMDATABANK.org::::EMD-65026::::</label>
                <annotation_details>This map was used for model building.</annotation_details>
            </additional_map>
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