REL RCSB RCSB RCSB 2015-05-07 2015-05-20 2015-05-20 2015-08-19 Structure of the L-protein of vesicular stomatitis virus from electron cryomicroscopy Liang B Li Z Jenni S Rameh AA Morin BM Grant T Grigorieff N Harrison SC Whelan SPJ RNA-dependent RNA polymerase, RNA capping, cryoEM single-particle analysis Liang B Li Z Jenni S Rameh AA Morin BM Grant T Grigorieff N Harrison SC Whelan SPJ Structure of the L-protein of vesicular stomatitis virus from electron cryomicroscopy CELL(CAMBRIDGE,MASS.) 162 314 327 2015 26144317 doi:10.1016/j.cell.2015.06.018 5a22 FULLOVERLAP VSV-L VSV-L One monomer of VSV-L bound to one monomer of P 2 0.25 VSV large protein Vesicular stomatitis virus 0.24 1 Monomer true Spodoptera frugiperda Sf21 VSV phosphoprotein Vesicular stomatitis virus 0.01 1 Monomer true Escherichia coli BL21 BL21 singleParticle particle 0.35 7.4
25 mM HEPES, 250 mM NaCl, 6 mM MgSO4, 0.5 mM TCEP
400 mesh Quantifoil R1.2/1.3 Cu grid
 ETHANE 65 FEI VITROBOT MARK I Blot time 2 seconds, drain time 1 second before plunging FEI TECNAI F20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.0 0.9 2.3 29000.0 40410.0 GATAN LIQUID NITROGEN
Beam intensity: 8 electrons/pixel/s Movie mode: 30 frames, 5 frames/s
2014-08-01 GATAN K2 (4k x 4k) 5 1272 31
Images are the sums of all 30 aligned movie frames (high dose) or frames 3 - 12 (low-dose).
 CT3500
An initial map was obtained with EMAN2, IMAGIC, and TIGRIS. CTF was determined using CTFFIND3. Refinement and classification were done using Frealign.
Each particle
 OTHER 3.8 OTHER EMAN2, IMAGIC, Frealign
The final map represents the best class out of three classes.
74940 3 emd_6337.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 120 120 120 0 0 0 120 120 120 148.44 148.44 148.44 90.0 90.0 90.0 X Y Z -2.92821145 5.04094791 0.05180021 0.38479805 1.237 1.237 1.237 1.2 AUTHOR Reconstruction of the L-protein of vesicular stomatitis virus
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