REL RCSB RCSB RCSB 2015-02-22 2015-03-18 2015-05-13 2015-08-26 Yeast V-ATPase state 1 Zhao J Benlekbir S Rubinstein JL V-ATPase, V-type ATPase, vacuolar-type ATPase, yeast, Saccharomyces cerevisiae, hydrolase Zhao J Benlekbir S Rubinstein JL Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase. NATURE 521 241 245 2015 25971514 doi:10.1038/nature14365 EMD-6285 FULLOVERLAP EMD-6286 FULLOVERLAP 3j9t FULLOVERLAP Vacuolar-type ATPase Vacuolar-type ATPase
Detergent solubilized protein complex
A3B3CDE3FG3HadcXc'Yc''Z where X, Y, and Z indicate unknown stoichiometry and X+Y+Z=10 1 0.9 0.9 SDS-PAGE, size exclusion chromatography Vacuolar-type ATPase Saccharomyces cerevisiae SABY31 Yeast 0.9 0.9
Detergent-solubilized protein complex
1 monomer false singleParticle particle 10 7.4
50 mM Tris-HCl, 150 mM NaCl, 0.02% w/v dodecylmaltoside
Homemade holey carbon on 400 square mesh Cu/Rh grid, glow-discharged 2 mins
 ETHANE-PROPANE MIXTURE 100 77 FEI VITROBOT MARK III Blot for 23 seconds before freezing. FEI TECNAI F20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.0 1.5 7.0 34483.0 34483.0 GATAN LIQUID NITROGEN Manually corrected by inspecting FFT.
K2 Summit in counting mode, 2 frames/s for 15 s
2013-10-19 GATAN K2 (4k x 4k) 3685 30 32.
Particles automatically selected using TMaCS and processed in Relion.
Each particle
 OTHER 6.9 OTHER Relion 50503 emd_6284.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 371.2 371.2 371.2 90.0 90.0 90.0 X Y Z -0.04820368 0.15646601 0.00046598 0.00966013 1.45 1.45 1.45 0.03 AUTHOR Yeast V-ATPase state 1
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 1U7L A FLEXIBLE FIT Chimera, MDFF
Rigid body fitting performed in Chimera first, followed by flexible fitting performed using Molecular Dynamics Flexible Fitting (MDFF).
REAL 1HO8 A FLEXIBLE FIT Chimera, MDFF
Rigid body fitting performed in Chimera first, followed by flexible fitting performed using Molecular Dynamics Flexible Fitting (MDFF).
REAL 4RND A B FLEXIBLE FIT Chimera, MDFF
Rigid body fitting performed in Chimera first, followed by flexible fitting performed using Molecular Dynamics Flexible Fitting (MDFF).
REAL 4DL0 E G FLEXIBLE FIT Chimera, MDFF
Rigid body fitting performed in Chimera first, followed by flexible fitting performed using Molecular Dynamics Flexible Fitting (MDFF).
REAL
emd_6284.png
emd_6284_fsc.xml