2026-02-04 REL PDBc INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY DATABASE_REFERENCES citation citation_author em_admin _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _em_admin.last_update EXPERIMENTAL_SUMMARY citation citation_author em_admin _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _em_admin.last_update PDBj PDBc 2024-10-22 2025-07-23 2025-07-23 2026-02-04 Other government 32200113 China Other government 232301420013 China Other government 232102311001 China SARS-CoV-2 related bat coronavirus BANAL-52 spike in the locked state Li QQ Cai X Li XN Zhang YB Li R Kang ZR Wan DD Wang JX Yang JX Shi JX Jin SL Peng Y Zang N Xie ZK Wan YS Shang J SARS-CoV-2 related bat coronavirus BANA-52 spike with linoleic acid binding, VIRAL PROTEIN Li Q Cai X Li X Zhang Y Li R Kang Z Wan D Wang J Li L Yang J Shi J Jin S Sun X Peng Y Zang N Xie Z Wan Y Shang J Structural and functional constraints on spike activation and host protease utilization limit cell entry of SARS-CoV-2-related bat coronaviruses. J.Virol. US 99 e0100725 e0100725 2025 40704806 doi:10.1128/jvi.01007-25 1098-5514 0825 JOVIAM 9k6z FULLOVERLAP EMDB EMD-62143 associated EM volume
SARS-CoV-2 related bat coronavirus BANAL-52 spike in the locked state
 SARS-CoV-2 related bat coronavirus BANAL-52 spike protein SARS-CoV-2 related bat coronavirus BANAL-52 spike protein 0 1 Horseshoe bat sarbecovirus 450 Spike glycoprotein Horseshoe bat sarbecovirus 0.138414312 3 Mammalia LEVO MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSSTRGVYYPDKVFRSSVLHLTQDLFLPFFSNVTWFHAIHVSGTNGIKRFD NPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHRNNKSWMESEFRVY SSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPPGFSALEPLVDLPIGINITRFQT LLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCSLDPLSETKCTLKSFTVEKGIYQTSNFRV QPTESIVRFPNITNLCPFGEVFNATTFASVYAWNRKRISNCVADYSVLYNSTSFSTFKCYGVSPTKLNDLCFTNVYADSF VVRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPC NGVEGFNCYFPLQSYGFHPTNGVGYQPYRVVVLSFELLNAPATVCGPKKSTNLIKNKCVNFNFNGLTGTGVLTESNKKFL PFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNASNQVAVLYQDVNCTEVPVAIHANQLTPTWRVYSTGS NVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSRSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTT EILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPQIKDFGGFNFSQ ILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITS GWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVK QLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCG KGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSG NCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLSDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELG KYEQYIKGSGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHHHH A0AA49X976 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 54 NAG LINOLEIC ACID 0.000280445 3 EIC singleParticle particle 7.4 ETHANE TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.5 2.5 FEI FALCON IV (4k x 4k) 50.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.51 FSC 0.143 CUT-OFF 20175 PROJECTION MATCHING PROJECTION MATCHING emd_62143.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 424.96 424.96 424.96 90.0 90.0 90.0 X Y Z -0.07910304 0.17214268 0.00021715334 0.0034050564 1.66 1.66 1.66 0.035 AUTHOR We carefully examined the dataset and conducted an additional round of duplicate removal, eliminating 249 particles. However, after performing 3D refinement, no significant improvement in the FSC was observed. We then repeated the process using a looser mask, but the FSC still did not reach satisfactory levels. Subsequently, we re-extracted the selected particles using a smaller box size and carried out another round of 3D refinement. This time, we observed a slight improvement in the FSC, which now drops to zero, and still maintains a resolution of 3.5 angstrom. emd_62143_msk_1.map emd_62143_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 424.96 424.96 424.96 90.0 90.0 90.0 X Y Z -0.033385575 0.101019114 0.00012607948 0.0037260419 1.66 1.66 1.66 AUTHOR emd_62143_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 424.96 424.96 424.96 90.0 90.0 90.0 X Y Z -0.037634976 0.102819234 0.0001317902 0.0037430439 1.66 1.66 1.66 AUTHOR